Gene Model ID Gene Symbol Source Chromosome Start End GRMZM2G026930 a1 Classical Gene Chr3 216,386,031 216,387,865 GRMZM2G345717 a2 Classical Gene Chr5 66,136,522 66,139,360 GRMZM2G013726 a4 Classical Gene Chr8 145,645,771 145,647,394 GRMZM5G817886 aaa1 Chr2 10,216,755 10,222,011 GRMZM2G120302 aap1 Chr9 7,579,688 7,587,102 GRMZM2G136910 aasr1 from Virlouvet et al 2011 Chr10 8,852,553 8,853,933 GRMZM5G854138 aasr2 from Virlouvet et al 2011 Chr2 139,700,113 139,701,207 GRMZM2G044132 aasr3 from Virlouvet et al 2011 Chr2 54,473,360 54,474,872 GRMZM2G052100 aasr5 from Virlouvet et al 2011 Chr10 116,077,391 116,078,438 GRMZM2G057841 aasr6 from Virlouvet et al 2011 Chr5 171,162,247 171,162,872 GRMZM2G014797 aasr7 from Virlouvet et al 2011 Chr3 65,662,114 65,662,673 GRMZM2G314075 aasr8 from Virlouvet et al 2011 Chr3 65,665,421 65,666,059 GRMZM2G383699 aasr9 from Virlouvet et al 2011 Chr3 65,739,867 65,740,452 GRMZM2G157369 abc1 Chr4 171,570,493 171,575,379 GRMZM2G105570 abcf1 Chr2 229,565,962 229,569,990 GRMZM2G177812 abcg11 Belcher et al., 2015 Chr2 24,498,593 24,503,843 GRMZM2G179147 abh1 aligns to sequence DR806072 Chr5 200,705,194 200,707,991 GRMZM2G126505 abh2 aligns to sequence CD433445 Chr4 159,692,123 159,694,949 GRMZM2G105954 abh3 aligns to sequence EU964577 Chr4 57,970,815 57,976,241 GRMZM2G065928 abh4 aligns to sequence EC904849 Chr7 126,008,605 126,011,545 GRMZM2G002142 abh5 aligns to sequence CD941324 Chr2 186,842,961 186,845,670 AC193767.3_FG003 abi10 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 148,761,047 148,762,234 GRMZM2G065478 abi11 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 165,089,891 165,092,452 GRMZM2G102059 abi12 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 15,033,794 15,035,837 GRMZM2G018336 abi13 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 28,659,785 28,661,138 GRMZM2G106673 abi14 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 26,518,896 26,526,586 GRMZM2G361376 abi15 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 232,108,213 232,112,166 GRMZM2G024948 abi16 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 196,729,019 196,731,042 GRMZM2G017187 abi17 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 48,136,356 48,141,220 GRMZM2G019956 abi18 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 18,152,128 18,154,870 GRMZM2G035701 abi19 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 154,216,668 154,220,485 GRMZM2G018485 abi2 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 134,624,802 134,626,574 GRMZM2G313737 abi20 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 155,378,968 155,387,313 GRMZM2G126194 abi21 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 109,396,005 109,397,093 GRMZM2G008356 abi22 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 157,708,697 157,716,763 GRMZM2G180168 abi23 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 78,160,467 78,161,649 GRMZM2G088413 abi24 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 254,478,910 254,482,162 GRMZM2G344521 abi25 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 254,590,445 254,594,484 GRMZM2G423393 abi26 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 67,375,028 67,375,918 GRMZM2G123461 abi27 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 180,722,884 180,724,089 GRMZM2G109879 abi28 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 103,802,791 103,809,253 GRMZM2G084173 abi29 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 68,219,540 68,224,677 GRMZM2G149940 abi3 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 1,684,944 1,691,150 GRMZM2G088427 abi30 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 254,487,577 254,489,679 GRMZM2G177244 abi31 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 165,897,795 165,900,405 GRMZM2G158162 abi32 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 173,216,702 173,223,537 GRMZM2G065538 abi33 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 152,001,159 152,002,001 GRMZM2G125095 abi34 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 83,653,655 83,654,919 GRMZM5G834874 abi35 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 181,252,639 181,256,424 GRMZM2G001048 abi36 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 14,748,387 14,751,790 GRMZM2G027253 abi37 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 56,611,496 56,612,170 GRMZM2G142999 abi38 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 125,822,461 125,823,598 GRMZM2G172621 abi39 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 217,651,494 217,673,563 GRMZM2G098063 abi4 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 254,460,346 254,462,461 GRMZM2G328742 abi40 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 189,990,840 189,992,872 GRMZM5G805685 abi41 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 6,074,814 6,076,964 GRMZM2G098443 abi42 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 96,201,480 96,202,346 GRMZM2G028794 abi43 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 150,250,653 150,252,625 GRMZM2G405170 abi44 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 44,129,684 44,130,359 GRMZM2G174610 abi45 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 154,832,684 154,837,678 GRMZM2G065496 abi46 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 165,085,207 165,088,108 GRMZM2G125596 abi47 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 195,559,254 195,562,953 GRMZM2G111123 abi48 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 221,999,802 222,002,668 GRMZM2G405699 abi49 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 267,970 270,851 GRMZM2G320754 abi5 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 18,103,497 18,105,325 GRMZM2G102938 abi50 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 57,753,651 57,755,275 GRMZM2G173321 abi51 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 65,200,137 65,213,038 GRMZM2G160224 abi6 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 25,616,688 25,619,269 GRMZM2G109480 abi7 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 17,698,816 17,700,801 GRMZM2G082227 abi8 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 4,541,352 4,542,978 GRMZM2G522066 abi9 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 165,099,882 165,101,147 GRMZM5G832362 abil1 Forestan et al, 2016 Chr3 226,961,580 226,962,818 GRMZM2G132116 abk1 Zheng et al., 2016 Chr3 6,793,085 6,797,402 GRMZM2G116204 abp1 Classical Gene Chr3 133,916,691 133,921,441 GRMZM2G064371 abp4 Classical Gene Chr10 26,670,823 26,673,897 GRMZM2G035688 abph1 Classical Gene Chr2 28,104,302 28,109,281 GRMZM2G035688 abph1 Chr2 28,104,302 28,109,281 AC210173.4_FG005 AC210173.4_FG005 Chr1 224,102,016 224,105,678 GRMZM2G079908 acb1 Chr10 76,415,905 76,418,574 AC197672.3_FG002 acc1 chr10 gene homologous to U58598 Chr10 98,149,608 98,168,566 GRMZM5G858094 acc2 chr 2 gene with homology to AF359519 Chr2 83,024,018 83,036,516 GRMZM2G164883 acco1 Yamauchi et al., 2016 Chr6 104,114,291 104,115,533 GRMZM2G166639 acco15 Yamauchi et al., 2016 Chr10 90,488,171 90,489,769 GRMZM2G007249 acco2 Yamauchi et al., 2016 Chr7 124,313,854 124,315,851 GRMZM2G126732 acco20 Chr4 177,657,802 177,660,210 GRMZM2G166616 acco3 Yamauchi et al., 2016 Chr10 90,480,467 90,481,799 GRMZM2G072529 acco31 Yamauchi et al., 2016 Chr10 90,301,775 90,303,069 GRMZM2G052422 acco35 from BT033380 Chr5 210,825,846 210,828,416 GRMZM2G332423 acco4 Yamauchi et al., 2016 Chr10 90,448,978 90,450,072 GRMZM6G953609 ache1 not located to chr in v3 = Zm00001d021961 in v4 scaffold_107 9 854 GRMZM2G020801 aco1 Chr4 28,147,612 28,154,163 GRMZM5G858454 aco2 Chr10 96,344,573 96,353,240 GRMZM2G009808 aco3 from: AF457945 Chr9 152,030,140 152,038,415 GRMZM2G171707 aco5 from: CO520918 Chr2 203,572,465 203,578,306 AC211394.4_FG004 acp1 Chr9 95,254,430 95,260,811 GRMZM2G175818 acpt1 Chr1 206,784,775 206,787,442 GRMZM2G163015 acs1 Yamauchi et al., 2016 Chr3 6,433,703 6,435,769 GRMZM2G164405 acs2 from: AY359585 Chr2 15,900,748 15,904,400 GRMZM2G018006 acs3 Yamauchi et al., 2016 Chr9 23,963,178 23,966,958 GRMZM2G054361 acs6 Chr1 271,834,818 271,837,308 GRMZM5G894619 acs7 Chr10 136,107,954 136,110,772 GRMZM2G126010 act1 Classical Gene Chr8 99,906,105 99,909,909 Zm00001d012277 act2 v4 Chr8 171,775,071 171,778,423 GRMZM2G117603 adf1 Classical Gene Chr7 148,916,447 148,917,753 GRMZM2G097122 adf2 Chr2 200,140,261 200,141,322 GRMZM2G060702 adf3 from: EU952653 Chr1 293,239,343 293,243,048 GRMZM2G077942 adf5 Chr1 32,872,877 32,876,200 GRMZM2G442658 adh1 Classical Gene Chr1 274,050,254 274,054,148 GRMZM2G098346 adh2 Classical Gene Chr4 13,409,584 13,412,986 GRMZM2G178192 adk1 Chr6 2,450,158 2,455,264 GRMZM2G119852 adss1 Chr1 15,773,077 15,777,890 GRMZM2G437912 adt6 Olukolu, BA et al. 2016 Chr2 59,667,646 59,669,581 Zm00001d053301 adxr1 v4; from: EU973445 Chr4 225,026,663 225,038,512 GRMZM2G032628 ae1 Classical Gene Chr5 168,492,139 168,509,225 GRMZM2G032628 ae1 Chr5 168,492,139 168,509,225 GRMZM2G059037 afd1 Classical Gene Chr6 166,795,461 166,827,341 GRMZM2G059037 afd1 from B73_v2 alignment to cDNA AY788900 | 60202504 (July 2011) Chr6 166,795,461 166,827,341 GRMZM2G095126 agal1 Chr1 228,378,444 228,381,659 GRMZM2G162525 ago1 from: BT036371 Chr8 134,439,555 134,444,960 AC189879.3_FG003 ago101 from: BT069919 Chr9 87,408,375 87,414,276 GRMZM2G141818 ago104 Chr6 168,642,369 168,650,358 GRMZM2G089743 ago105 from: BT037796 Chr3 43,646,012 43,657,336 GRMZM2G461936 ago108 Zhai et al., 2015 Chr5 13,611,800 13,618,698 GRMZM2G079080 ago10b Zhai et al., 2015 Chr6 103,286,236 103,293,200 GRMZM2G105250 ago18a Chr2 199,510,528 199,516,085 GRMZM2G457370 ago18b Char et al., 2016 Chr1 250,132,189 250,137,737 GRMZM2G441583 ago1a Xu et al., 2016 Chr6 43,253,105 43,261,555 AC209206.3_FG011 ago1b Xu et al., 2016 Chr10 137,506,877 137,513,415 GRMZM2G039455 ago1c Xu et al., 2016 Chr2 17,563,301 17,573,156 GRMZM2G361518 ago1d Xu et al., 2016 Chr5 64,791,077 64,796,881 GRMZM2G007791 ago2a Zhai et al., 2015 Chr2 9,973,816 9,981,340 GRMZM2G354867 ago2b Zhai et al., 2015 Chr10 141,823,070 141,828,449 GRMZM2G589579 ago4a Zhai et al., 2015 Chr8 2,511,463 2,518,808 GRMZM2G059033 ago5b Zhai et al., 2015 Chr2 233,385,077 233,392,000 GRMZM2G123063 ago5c Zhai et al., 2015 Chr5 4,001,278 4,009,529 GRMZM2G347402 ago6 Zhai et al., 2015 Chr7 72,044,775 72,053,779 GRMZM2G106213 agp1 from Huang et al 2014 Chr2 174,023,583 174,034,507 GRMZM2G027955 agp2 from W21619 Chr6 166,787,452 166,793,059 GRMZM2G391936 agpll1 Huang et al. 2014 Chr1 273,514,151 273,518,985 GRMZM2G144002 agpll2 Huang et al. 2014 Chr7 23,769,242 23,780,203 GRMZM2G163437 agpsl1 from AF334960 Chr1 221,701,404 221,705,997 GRMZM2G302639 agrr21 Chr8 172,961,620 172,964,067 GRMZM2G015295 ahh1 Classical Gene Chr4 21,158,461 21,161,610 GRMZM2G044569 AI665421 Chr1 268,942,960 268,947,663 GRMZM2G005346 AI714808 Chr2 47,788,105 47,793,199 GRMZM2G443525 AI855190 Chr1 164,103,203 164,108,542 GRMZM6G177089 AI861369 Annotation questioned Chr2 187,273,065 187,274,870 GRMZM2G129413 aic1 Leiboff et al., 2015 Chr1 119,659,886 119,663,853 GRMZM2G061234 ak1 from: AF178976 Chr7 159,799,011 159,812,272 GRMZM2G019838 ak2 Chr4 239,494,965 239,497,297 GRMZM2G104546 akh2 Classical Gene Chr2 173,486,913 173,506,976 GRMZM2G047774 akin1 Chr1 299,540,824 299,549,015 GRMZM2G052812 akr1 Chr6 64,079,621 64,110,792 GRMZM2G091054 al9 from: FN400767 Chr8 171,118,734 171,119,464 GRMZM2G057823 ald1 Classical Gene Chr3 165,765,568 165,768,179 GRMZM2G057823 ald1 Chr3 165,765,568 165,768,179 GRMZM2G066024 ald2 Chr8 162,856,704 162,859,417 GRMZM2G125268 aldh2 from: AF348417 Chr4 165,996,358 165,999,622 GRMZM2G071021 aldh3 from: AF348413 Chr3 221,771,183 221,775,333 GRMZM2G097706 aldh5 Chr3 221,783,373 221,791,498 GRMZM2G148810 alf1 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 124,888,239 124,892,792 GRMZM2G050495 alf10 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 119,722,635 119,728,067 GRMZM2G158918 alf11 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 102,976,534 102,982,864 GRMZM5G893976 alf12 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 15,276,414 15,280,931 GRMZM2G080917 alf13 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 170,149,613 170,154,226 GRMZM2G156088 alf14 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 119,489,514 119,496,893 AC225147.4_FG003 alf15 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 292,952,249 292,956,375 GRMZM2G016564 alf16 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 119,517,572 119,518,319 GRMZM2G110952 alf17 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 2,576,260 2,595,158 GRMZM2G008259 alf18 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 11,403,566 11,428,284 GRMZM2G047316 alf19 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 158,912,747 158,917,610 GRMZM2G063864 alf2 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 174,455,049 174,458,989 GRMZM2G038066 alf3 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 165,038,048 165,044,961 GRMZM2G153087 alf4 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 135,934,895 135,940,205 GRMZM2G016817 alf5 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 147,835,864 147,843,229 GRMZM2G115424 alf6 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 31,315,303 31,320,114 GRMZM2G107807 alf7 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 120,648,398 120,651,921 GRMZM2G172001 alf8 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 164,293,635 164,297,965 GRMZM2G017142 alf9 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 125,066,160 125,069,152 GRMZM2G030571 algt1 B73_V2 alignment to EU972920 Chr1 56,676,074 56,678,959 GRMZM2G003762 alp1 Chr10 4,676,400 4,679,041 GRMZM2G143357 als1 Chr4 96,832,612 96,834,891 GRMZM2G143008 als2 Chr5 164,024,379 164,026,683 GRMZM2G124963 alt10 from Tausta et al 2014 Chr2 212,180,526 212,185,824 GRMZM2G088064 alt4 from alignment of B73_v2 to AF055898 and EU962513 Chr5 37,251,082 37,256,273 GRMZM2G088028 alt5 from alignment of B73_v2 to EU954010 Chr5 37,248,072 37,250,198 GRMZM2G120563 alt7 from alignment of B73_v2 to EU969863 Chr7 1,309,331 1,321,760 GRMZM5G840582 alt8 from alignment to of B73_v2 to Duff et al sequence listed as gi|21213577 Chr2 236,204,010 236,208,701 GRMZM2G053999 alt9 from Tausta et al 2014 Chr7 165,787,766 165,790,666 GRMZM5G883855 am1 Classical Gene Chr5 16,109,038 16,115,968 GRMZM2G060400 ami1 one of 2 gene models that match protein accession ACR34426 on B73 reference genome_v2 (MLS June 2012) Chr2 183,985,910 183,988,519 GRMZM2G137676 ami2 one of 2 gene models that align to protein accession ACR34426 (MLS June 2012) Chr7 120,006,864 120,009,317 GRMZM2G359298 amo1 Chr10 103,645,937 103,651,506 GRMZM2G175140 amt1 Gu et al., 2013 Chr10 130,101,668 130,103,747 GRMZM2G028736 amt2 Gu et al., 2013 Chr5 185,705,977 185,707,950 GRMZM2G118950 amt3 Gu et al., 2013 Chr2 28,938,473 28,940,284 GRMZM2G138468 amya3 Classical Gene Chr2 186,911,744 186,913,606 GRMZM2G450125 amyb2 from: EU957499 Chr1 9,051,958 9,054,939 GRMZM2G175218 amyb4 from: Entrez Gene 100192000 Chr3 1,535,920 1,540,195 GRMZM2G058310 amyb5 Classical Gene Chr7 155,396,510 155,399,710 GRMZM2G081554 an1 based on genomic DNA sequence of cloned gene Chr1 241,277,428 241,285,679 GRMZM2G039942 ane1 Classical Gene Chr4 222,614,892 222,615,724 GRMZM2G372553 ane3 Classical Gene Chr10 80,752,876 80,753,536 GRMZM2G325131 ans1 from EU965109 Chr2 41,652,488 41,657,690 GRMZM2G171383 ans2 from DV174707 Chr10 123,312,541 123,317,141 GRMZM5G837108 ant1 From: EU952880 Chr5 203,603,047 203,604,860 GRMZM2G135186 ant2 Classical Gene Chr4 163,798,958 163,802,105 GRMZM2G064993 anx1 Chr6 112,316,067 112,319,639 GRMZM2G061950 anx2 Chr5 208,242,490 208,245,487 GRMZM2G141535 ao1 aligns to mRNA sequence accession D88451 (MLS May 2012) Chr1 286,519,501 286,527,285 GRMZM5G899851 ao2 Owens et al., 2014 Chr5 4,589,117 4,593,360 GRMZM2G019799 ao3 includes SNP pzb01403.4, associated with locus (Setter et al 2013; MLS 2013) Chr1 286,429,198 286,437,131 GRMZM2G141473 ao4 Owens et al., 2014 Chr1 286,577,038 286,584,000 GRMZM2G406830 ao5 Owens et al., 2014 Chr7 7,451,202 7,456,538 GRMZM2G077316 aoc1 from alignment of AY103942 to B73_v2 Chr1 76,740,125 76,741,716 GRMZM2G067225 aos1 Christensen et al.2015 Chr9 145,603,968 145,606,347 GRMZM2G002178 aos2 from alignment of DQ658738 to B73_v2 chr1 hit Chr1 28,926,395 28,928,612 GRMZM2G376661 aos3 Christensen et al., 2015 Chr1 280,918,468 280,920,450 GRMZM2G072653 aos4 Christensen et al., 2015 Chr1 280,908,391 280,910,737 AC233960.1_FG002 aox1 aligns to sequence accession AY059646 Chr5 200,032,552 200,035,241 GRMZM2G125669 aox2 aligns to sequence accession AY059647 Chr2 12,345,073 12,348,033 GRMZM2G074743 aox3 aligns to sequence accession AY059648 Chr2 12,274,611 12,276,371 AC195874.2_FG002 ap17 from: EU959074 Chr2 220,221,529 220,227,569 GRMZM2G082998 apg1 Belcher et al., 2015 Chr1 174,010,202 174,012,244 GRMZM2G007453 apo1 from Watkins et al 2011 Chr2 9,988,448 9,994,999 AC189750.4_FG004 aprl1 from: AY739296 Chr7 152,388,543 152,391,232 GRMZM2G087254 aprl2 from: AY739297 Chr2 203,181,028 203,184,356 GRMZM2G042582 aprl3 from: AY739298 Chr4 180,575,468 180,577,838 GRMZM2G159535 aprl4 from: AY739299 Chr5 208,428,136 208,430,824 GRMZM2G085249 aprl5 Chr1 218,147,403 218,155,498 GRMZM2G141848 aprl6 from: Entrez Gene 606422 Chr10 24,452,184 24,457,178 GRMZM2G155073 aprl7 from: AY739302 Chr3 132,867,816 132,870,557 GRMZM2G046231 aprl8 from: AY739303 & Entrez Gene 606423 Chr1 290,214,394 290,215,834 GRMZM2G025248 aprl9 from: AY739304 Chr5 3,553,168 3,555,891 GRMZM2G170101 aprt1 Chr2 31,501,795 31,510,516 GRMZM2G149952 aps1 from: EU973074 Chr1 275,157,705 275,161,519 GRMZM2G448687 apt1 Classical Gene Chr9 129,022,644 129,046,413 GRMZM2G054300 apx1 from B73_v2 alignment to EU966070 Chr9 138,678,093 138,682,438 GRMZM2G140667 apx2 from: Z34934 Chr2 219,258,176 219,261,097 GRMZM2G137839 apx3 from B73_v2 alignment to EU973991 Chr1 43,682,818 43,686,019 GRMZM2G316256 apx4 Xu et al., 2017 Chr7 15,085,776 15,086,381 GRMZM2G061900 ara3 Chr1 293,212,122 293,215,703 GRMZM2G395844 arf1 Chr5 3,055,229 3,058,761 GRMZM2G169820 arftf1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 190,580,078 190,595,543 GRMZM2G338259 arftf10 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 156,523,681 156,529,660 GRMZM2G056120 arftf11 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 196,638,145 196,644,110 GRMZM2G437460 arftf12 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 210,346,707 210,354,569 GRMZM2G378580 arftf13 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 23,548,742 23,554,591 GRMZM2G137413 arftf14 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 118,717,709 118,723,692 GRMZM2G081406 arftf15 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 143,829,841 143,832,631 GRMZM2G028980 arftf16 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 237,016,081 237,022,029 GRMZM2G159399 arftf17 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 27,964,682 27,969,438 GRMZM2G035405 arftf18 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 42,328,068 42,332,365 AC207656.3_FG002 arftf19 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 49,282,509 49,284,911 GRMZM2G153233 arftf2 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 230,778,452 230,782,861 GRMZM2G102845 arftf20 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 78,415,886 78,423,936 GRMZM2G390641 arftf21 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 89,284,779 89,287,980 GRMZM2G089640 arftf22 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 91,485,004 91,487,958 GRMZM2G441325 arftf23 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 158,843,020 158,849,314 GRMZM2G030710 arftf24 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 164,719,893 164,725,158 GRMZM2G116557 arftf25 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 159,641,546 159,646,951 GRMZM5G874163 arftf26 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 173,768,820 173,775,129 GRMZM2G160005 arftf27 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 11,128,329 11,140,405 GRMZM2G006042 arftf28 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 13,788,443 13,794,457 GRMZM2G086949 arftf29 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 146,553,165 146,558,259 GRMZM2G078274 arftf3 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 2,271,404 2,279,360 GRMZM2G475882 arftf30 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 147,154,383 147,163,265 GRMZM2G023813 arftf31 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 148,635,880 148,637,733 GRMZM2G181254 arftf32 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 159,192,608 159,194,386 GRMZM2G179121 arftf33 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 158,940,439 158,942,519 GRMZM2G081158 arftf34 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 173,434,033 173,442,028 GRMZM2G317900 arftf35 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 57,456,264 57,463,575 GRMZM2G702026 arftf36 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 173,850,054 173,855,670 GRMZM2G075715 arftf37 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 39,745,937 39,752,588 GRMZM2G005284 arftf38 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 130,985,138 130,987,563 GRMZM2G034840 arftf4 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 3,342,917 3,349,175 GRMZM5G808366 arftf5 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 26,048,274 26,053,073 GRMZM2G122614 arftf6 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 28,604,618 28,606,017 GRMZM2G475263 arftf7 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 1,552,179 1,556,524 GRMZM2G352159 arftf8 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 107,585,492 107,591,866 GRMZM2G073750 arftf9 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 123,881,899 123,888,098 GRMZM2G365731 arid1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 236,206,412 236,245,981 GRMZM5G883993 arid10 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 100,869,848 100,876,008 GRMZM2G140156 arid2 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 184,041,779 184,053,401 GRMZM2G110109 arid3 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 162,151,216 162,155,711 GRMZM2G138976 arid4 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 120,237,787 120,284,629 GRMZM2G421899 arid5 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 202,662,495 202,668,619 GRMZM2G024976 arid6 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 159,240,339 159,247,522 GRMZM2G466292 arid7 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 65,453,074 65,462,393 GRMZM2G180654 arid8 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 98,248,764 98,255,015 GRMZM5G866423 arid9 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 209,583,050 209,585,556 GRMZM2G015384 arp4 Nelissen et al., 2015 Chr1 2,874,117 2,894,252 GRMZM2G066460 arpp0 from: Y07959 Chr6 9,206,517 9,209,074 GRMZM2G032315 arpp1a Classical Gene Chr6 4,596,812 4,609,378 GRMZM2G119809 arpp2a Classical Gene Chr8 72,904,843 72,907,132 GRMZM2G102891 arpp2a-2 from: U62748 Chr8 72,750,165 72,752,947 GRMZM2G010257 arpp2a-3 from: U62749 Chr2 2,550,585 2,552,593 GRMZM2G114954 arpp2b from: U62753 Chr8 98,106,249 98,110,627 GRMZM2G077208 arpp3 from: U62751 Chr5 56,870,925 56,872,383 GRMZM2G126821 arpp40 Chr9 151,935,786 151,938,224 GRMZM2G126834 arr1 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 146,136,871 146,143,251 GRMZM2G409974 arr2 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 13,465,293 13,469,635 GRMZM2G360523 arr4 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 101,990,935 101,999,695 GRMZM2G133262 arr5 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 58,834,080 58,845,813 GRMZM2G177220 arr6 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 165,939,858 165,943,821 GRMZM2G100318 arr7 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 163,129,203 163,133,084 GRMZM2G479110 arr8 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 213,780,789 213,785,593 GRMZM2G140633 asc1 from B73_V2 alignment to AW076338 Chr7 127,925,177 127,927,750 GRMZM2G048375 asg12a Chr9 148,237,745 148,240,963 GRMZM2G418289 asg3 Chr1 82,397,413 82,401,819 GRMZM2G054267 asg34a(msd) Chr7 13,967,993 13,969,287 GRMZM2G158342 asg48a Chr3 13,109,108 13,110,869 GRMZM2G003869 asg49 Chr7 128,171,458 128,175,453 GRMZM2G122863 asg73 Chr5 9,339,454 9,342,646 GRMZM5G882821 asg75 Chr1 59,507,378 59,510,682 GRMZM2G052935 ask2 Chr2 157,355,447 157,361,044 GRMZM2G074589 asn1 Chr9 32,468,024 32,477,360 GRMZM2G093175 asn2 Chr3 229,507,263 229,511,632 GRMZM2G053669 asn3 Chr1 45,118,780 45,122,813 GRMZM2G078472 asn4 Chr9 138,041,002 138,044,999 GRMZM2G395114 ast91 Purduns et al., 2015 Chr2 4,895,674 4,900,685 GRMZM2G127949 atl1 Chr3 178,053,577 178,060,075 GRMZM2G101020 atp1 Classical Gene Chr3 141,387,560 141,390,705 GRMZM2G101020 atp1 from B73_v2 alignment to EU962507 Chr3 141,387,560 141,390,705 GRMZM2G113408 atp2 from: entrez gene 542267 Chr6 163,133,778 163,137,313 GRMZM2G171628 atp3 from: BT062053 Chr2 202,325,435 202,328,872 GRMZM2G128665 atp4 Zoschke et al., 2012 Chr1 26,825,757 26,828,101 GRMZM5G862663 atpc1 from: X66005 Chr5 208,034,934 208,036,864 GRMZM2G048907 atpc2 Belcher et al., 2015 Chr7 152,868,671 152,870,546 GRMZM2G372928 atx3 Chr8 25,359,643 25,396,088 GRMZM2G085176 atx4 part of Zm00001d039355 in v4 Chr3 3,209,218 3,210,859 GRMZM2G085266 atx4 Chen et al, 2017 Chr3 3,200,792 3,209,093 Zm00001d039355 atx4 v4 Chr3 2,451,357 2,465,548 GRMZM2G170412 atx5 Chen et al, 2017 Chr8 147,255,919 147,262,824 GRMZM2G179814 atx5 part of Zm00001d011490 in v4 Chr8 147,263,113 147,264,543 GRMZM6G025093 atx5 part of Zm00001d011490 in v4 Chr8 147,255,919 147,262,824 Zm00001d011490 atx5 v4 Chr8 152,111,717 152,120,844 GRMZM2G106218 AW036917 Chr6 149,672,083 149,678,650 GRMZM2G140590 AW231791 Chr8 114,541,249 114,555,400 Zm00001d028925 AW400087 Chr1 51,729,487 51,730,402 GRMZM2G014240 AY103622 Chr9 14,328,479 14,333,699 GRMZM2G352129 AY103944 Chr2 31,534,332 31,539,953 GRMZM2G124557 AY104360 Chr1 189,385,226 189,390,834 GRMZM2G063754 AY105479 Chr6 123,931,291 123,934,591 GRMZM2G303118 AY106040 Chr2 14,837,139 14,848,360 GRMZM2G069676 AY106170 Chr7 41,746,480 41,810,114 GRMZM2G153138 AY106313 from: AY106313 Chr3 2,070,509 2,079,118 Zm00001d028708 AY106736 v4 alignment to AY106736 Chr1 43,891,995 43,892,168 GRMZM2G068117 AY106825 Chr1 293,700,005 293,704,720 GRMZM2G404973 AY107034 Chr2 22,692,870 22,695,229 GRMZM2G383404 AY107053 Chr6 120,201,718 120,203,603 GRMZM2G085718 AY107200 Chr4 229,715,408 229,720,104 GRMZM2G007466 AY107329 Chr5 183,171,312 183,177,271 GRMZM2G394212 AY107489 Chr1 50,093,597 50,096,783 GRMZM2G467169 AY107496 Chr9 12,108,547 12,115,783 GRMZM2G136453 AY107847 Chr1 195,364,024 195,371,310 GRMZM2G021781 AY108136 Chr1 277,442,411 277,443,354 GRMZM2G459811 AY109128 Chr1 293,870,055 293,875,566 GRMZM2G023392 AY109506 Chr1 250,361,435 250,364,192 GRMZM2G021605 AY109534 Chr4 181,259,476 181,262,496 GRMZM2G028039 AY109543 Chr9 149,430,555 149,437,059 GRMZM2G111309 AY109644 Chr7 148,490,575 148,493,173 GRMZM2G110198 AY109678 Chr1 115,412,522 115,416,244 GRMZM2G422649 AY109916 Chr1 299,045,202 299,049,209 GRMZM2G004619 AY109917 Chr2 199,378,455 199,380,799 GRMZM2G012566 AY109929 Chr1 38,552,479 38,555,256 GRMZM2G019267 AY110019 Chr1 271,027,530 271,032,041 GRMZM2G141799 AY110052 Chr1 39,217,739 39,224,044 GRMZM5G888696 AY110159 Chr1 228,622,230 228,626,047 GRMZM2G139041 AY110160 Chr1 295,097,497 295,100,438 GRMZM2G703928 AY110191 Chr1 227,428,695 227,431,105 GRMZM2G070011 AY110253 Chr4 15,320,600 15,322,087 GRMZM2G115981 AY110296 Chr1 184,600,901 184,602,544 GRMZM2G031568 AY110297 Chr3 67,694,182 67,699,591 GRMZM2G382569 AY110330 v3 position distinct from GRMZM2G703582; v4 location is merged Chr1 62,144,320 62,146,281 GRMZM2G703582 AY110330 v3 position distinct from GRMZM2G382569; v4 location is merged Chr1 61,951,365 61,953,102 Zm00001d029218 AY110330 v4 Chr1 62,747,068 62,748,525 GRMZM2G703918 AY110356 Chr1 224,142,943 224,149,783 GRMZM2G084783 AY110393 Chr1 51,288,714 51,290,044 GRMZM2G110572 AY110396 Chr1 147,990,710 148,002,097 GRMZM2G006047 AY110426 Chr1 287,181,576 287,182,811 GRMZM2G032047 AY110435 Chr1 46,129,394 46,130,844 GRMZM2G087612 AY110479 Chr1 291,937,388 291,941,593 GRMZM2G462635 AY110542 Chr6 135,110,368 135,111,326 GRMZM2G374302 AY110562 Chr4 144,862,958 144,868,207 GRMZM6G274034 AY110566 Chr1 183,801,911 183,803,760 GRMZM2G149265 AY110569 Chr8 167,827,882 167,831,438 GRMZM2G313678 AY110625 Chr5 1,033,436 1,038,047 GRMZM2G032047 AY110632 Chr1 46,129,394 46,130,844 GRMZM2G065552 AY110640 Chr1 44,344,382 44,345,273 GRMZM2G158261 AY110640 Chr1 44,339,652 44,344,157 Zm00001d028728 AY110640 v4 Chr1 44,521,225 44,532,226 GRMZM2G179308 AY111089 Chr5 180,787,355 180,790,720 GRMZM2G436319 AY111153 Chr1 194,767,910 194,771,939 GRMZM2G018793 AY111333 Chr3 93,198,079 93,199,928 GRMZM2G098331 AY111680 Chr1 104,477,515 104,491,515 GRMZM2G092823 AY111834 Chr1 207,572,006 207,574,422 GRMZM2G125239 AY111962 Chr4 221,138,448 221,144,193 GRMZM2G120440 AY112175 Chr1 294,807,181 294,809,796 AF546187.1_FG001 az19D1 from: AF371267 Chr1 161,790,710 161,791,432 AF546187.1_FG007 az19D2 from: AF371268 Chr1 162,006,911 162,007,636 GRMZM2G044625 az22z3 from: AF371275 Chr4 5,122,439 5,123,472 GRMZM2G346897 az22z4 from: Entrez Gene 606402 Chr4 5,145,291 5,146,364 GRMZM2G088365 az22z5 from: Entrez Gene 541926 Chr4 5,083,079 5,084,155 GRMZM2G172795 b1 Classical Gene Chr2 19,041,697 19,046,154 GRMZM2G172795 b1 from B73_v2 alignment to GenBank X57276 Chr2 19,041,697 19,046,154 GRMZM2G397518 ba1 Classical Gene Chr3 183,139,911 183,140,880 GRMZM2G397518 ba1 Chr3 183,139,911 183,140,880 GRMZM2G072274 baf1 alignment of B73_V2 to sequence JF309450 Chr9 21,976,903 21,978,472 GRMZM2G145720 bak1 Leiboff et al., 2015 Chr9 35,179,613 35,185,362 GRMZM2G008271 bap1a Chr10 80,861,842 80,863,106 GRMZM2G008403 bap1b Chr10 80,878,304 80,878,997 GRMZM2G152655 bap2 Classical Gene Chr4 34,294,927 34,295,919 GRMZM2G077673 bas1 Chr7 149,169,258 149,171,046 GRMZM2G007928 bbi1 Johnson et al., 2014 Chr3 179,685,800 179,686,954 GRMZM2G179366 bbr1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 192,523,101 192,525,654 GRMZM2G166230 bbr2 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 157,868,458 157,869,994 GRMZM2G164735 bbr3 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 43,266,139 43,268,012 GRMZM2G118690 bbr4 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 23,765,880 23,771,224 GRMZM2G307119 bd1 Classical Gene Chr7 172,248,843 172,250,339 GRMZM2G307119 bd1 from B73_v2 alignment to cDNA AY178191|27802486 (July 2011) Chr7 172,248,843 172,250,339 GRMZM2G160565 bde1 Classical Gene Chr5 196,601,246 196,608,839 GRMZM2G104226 BE639338 Chr3 214,143,658 214,147,325 GRMZM2G301071 BE639426 Chr1 274,775,918 274,780,056 GRMZM2G090432 ben1 Chr5 6,548,812 6,551,287 GRMZM2G102514 bes1 assigned by the Grassius project, (Yilmaz et al 2009) and the Cell Genomics Project Chr7 160,551,419 160,553,078 GRMZM2G091445 betl10 from: AI665330 Chr3 155,423,558 155,424,150 GRMZM2G175976 betl3 Classical Gene Chr3 132,282,587 132,283,333 GRMZM2G073290 betl4 from: AJ133531 Chr4 209,022,805 209,023,472 GRMZM2G087413 betl9 from: LOC100286270 Chr3 138,651,695 138,652,380 GRMZM2G051219 bf1 from BT034353 Chr9 153,861,473 153,877,358 GRMZM2G172204 bgaf1 alignment of cDNA AF232008 to B73_v2 AGP Chr7 26,167,430 26,169,874 GRMZM2G067654 bhlh10 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 12,986,561 12,988,736 GRMZM2G313756 bhlh100 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 108,376,074 108,377,174 GRMZM2G173521 bhlh101 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 73,730,378 73,731,762 GRMZM2G355469 bhlh102 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 118,390,725 118,392,197 GRMZM2G301089 bhlh103 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 274,801,584 274,803,327 GRMZM2G088443 bhlh104 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 14,937,168 14,939,315 GRMZM2G082586 bhlh105 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 128,740,346 128,742,573 GRMZM2G089501 bhlh106 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 130,270,033 130,277,723 GRMZM2G145146 bhlh107 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 127,620,549 127,621,728 GRMZM2G119823 bhlh108 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 105,635,764 105,638,288 GRMZM2G013688 bhlh109 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 139,760,958 139,761,887 GRMZM2G176289 bhlh11 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 160,021,000 160,023,829 GRMZM2G452996 bhlh110 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 12,462,798 12,465,171 GRMZM2G150327 bhlh111 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 112,414,537 112,416,571 GRMZM5G879527 bhlh112 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 188,065,123 188,068,113 GRMZM2G471635 bhlh113 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 57,373,825 57,374,550 GRMZM2G095899 bhlh114 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 257,635,033 257,637,914 GRMZM2G068604 bhlh115 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 178,455,867 178,460,697 GRMZM2G042895 bhlh116 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 76,600,002 76,602,213 GRMZM2G062541 bhlh117 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 87,704,026 87,706,060 GRMZM2G061906 bhlh118 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 151,319,278 151,321,414 GRMZM5G863198 bhlh119 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 150,359,143 150,360,185 GRMZM2G316758 bhlh12 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 174,031,590 174,034,049 GRMZM2G109605 bhlh120 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 49,157,774 49,159,839 GRMZM2G083504 bhlh121 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 192,028,339 192,031,016 AC233960.1_FG005 bhlh122 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 200,017,893 200,019,898 GRMZM2G369629 bhlh123 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 124,380,275 124,381,777 GRMZM2G132550 bhlh124 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 132,371,821 132,374,168 GRMZM2G017349 bhlh125 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 16,492,659 16,496,592 GRMZM2G057413 bhlh126 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 148,071,103 148,072,213 GRMZM2G128807 bhlh127 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 62,292,037 62,293,983 GRMZM2G314882 bhlh128 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 240,582,530 240,585,487 GRMZM5G856837 bhlh129 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 69,476,595 69,479,221 GRMZM2G091003 bhlh13 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 157,508,570 157,511,308 GRMZM2G033356 bhlh130 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 23,448,577 23,452,318 GRMZM2G171464 bhlh131 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 154,113,331 154,114,780 GRMZM2G114873 bhlh132 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 166,491,755 166,495,032 GRMZM2G437481 bhlh133 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 126,674,304 126,678,092 GRMZM2G086474 bhlh134 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 135,701,832 135,705,430 GRMZM2G134735 bhlh135 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 199,103,560 199,104,328 GRMZM2G144275 bhlh136 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 137,522,634 137,525,144 GRMZM2G019806 bhlh137 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 271,047,086 271,049,436 GRMZM2G176141 bhlh138 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 180,804,696 180,807,605 GRMZM2G064638 bhlh139 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 140,971,813 140,976,844 GRMZM5G817854 bhlh14 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 159,527,964 159,528,647 GRMZM2G475289 bhlh140 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 4,742,268 4,744,173 GRMZM2G080168 bhlh141 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 17,257,180 17,259,695 GRMZM2G074438 bhlh142 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 98,786,270 98,791,819 GRMZM2G043854 bhlh143 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 141,691,622 141,695,021 GRMZM2G042893 bhlh144 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 81,074,165 81,077,414 GRMZM2G472671 bhlh145 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 196,839,526 196,840,758 GRMZM2G085467 bhlh146 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 132,922,697 132,925,252 GRMZM2G383841 bhlh147 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 209,280,712 209,282,012 GRMZM2G080054 bhlh148 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 9,449,250 9,451,125 GRMZM2G057260 bhlh15 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 162,119,125 162,124,837 GRMZM2G045431 bhlh150 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 125,355,436 125,357,466 GRMZM2G137541 bhlh151 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 189,054,253 189,057,549 GRMZM5G839518 bhlh152 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 174,979,821 174,983,548 GRMZM2G036554 bhlh153 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 87,433,402 87,434,930 GRMZM2G385543 bhlh154 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 9,129,443 9,131,483 GRMZM2G042101 bhlh155 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 181,930,597 181,931,947 GRMZM2G317450 bhlh156 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 204,572,094 204,577,083 GRMZM2G009478 bhlh157 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 189,179,955 189,185,728 GRMZM2G165090 bhlh158 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 168,447,178 168,451,942 GRMZM2G004356 bhlh159 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 4,217,936 4,222,849 GRMZM2G006631 bhlh160 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 19,099,172 19,101,186 GRMZM2G045883 bhlh161 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 208,944,482 208,949,818 GRMZM2G093744 bhlh162 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 83,606,148 83,609,440 GRMZM5G865967 bhlh163 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 172,897,122 172,899,655 GRMZM2G058451 bhlh164 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 155,380,896 155,384,951 GRMZM2G145579 bhlh165 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 47,618,440 47,620,839 GRMZM2G114444 bhlh166 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 218,561,885 218,567,450 GRMZM2G147685 bhlh167 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 52,437,508 52,442,955 GRMZM2G030744 bhlh168 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 214,476,567 214,480,784 GRMZM2G113257 bhlh169 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 187,772,580 187,773,665 GRMZM2G137358 bhlh17 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 289,415,533 289,418,791 GRMZM2G082630 bhlh170 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 200,448,170 200,449,019 GRMZM2G024530 bhlh171 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 11,565,132 11,570,108 GRMZM2G017586 bhlh172 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 35,609,001 35,611,562 GRMZM5G882527 bhlh173 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 195,753,205 195,755,657 GRMZM2G016039 bhlh174 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 63,778,666 63,781,023 GRMZM2G173534 bhlh175 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 156,404,566 156,407,511 GRMZM2G082343 bhlh18 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 9,626,997 9,629,496 GRMZM2G066057 bhlh19 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 8,416,520 8,418,397 GRMZM2G414252 bhlh20 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 185,616,246 185,617,611 AC233899.1_FG002 bhlh21 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 149,930,657 149,932,165 GRMZM2G162450 bhlh22 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 75,508,770 75,510,438 GRMZM2G178182 bhlh23 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 193,433,358 193,435,869 GRMZM2G085751 bhlh24 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 225,161,834 225,165,399 GRMZM2G081816 bhlh25 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 219,263,852 219,266,149 GRMZM2G018472 bhlh26 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 168,430,589 168,435,266 GRMZM2G092091 bhlh27 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 272,109,897 272,113,700 GRMZM2G155043 bhlh28 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 257,844,735 257,852,201 GRMZM2G101350 bhlh29 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 200,993,308 200,996,110 GRMZM2G180452 bhlh3 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 29,260,545 29,264,281 GRMZM2G036092 bhlh30 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 207,554,896 207,556,510 GRMZM2G435015 bhlh31 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 140,262,343 140,265,347 GRMZM2G180406 bhlh32 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 162,105,905 162,109,184 GRMZM2G015666 bhlh33 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 188,465,323 188,467,491 GRMZM2G045109 bhlh34 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 68,081,459 68,085,268 GRMZM2G173372 bhlh35 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 7,991,271 7,993,431 GRMZM2G008691 bhlh36 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 179,831,785 179,834,012 GRMZM2G107672 bhlh37 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 160,532,119 160,533,504 GRMZM2G165188 bhlh38 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 4,752,932 4,754,547 GRMZM2G162382 bhlh39 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 10,699,275 10,703,311 AC177924.2_FG001 bhlh4 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 71,347,459 71,352,265 GRMZM2G526668 bhlh40 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 82,667,624 82,670,258 GRMZM2G171818 bhlh41 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 221,338,746 221,341,097 GRMZM2G107276 bhlh42 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 214,199,438 214,201,742 GRMZM2G165042 bhlh43 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 252,434,109 252,437,685 GRMZM2G175480 bhlh44 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 91,709,652 91,711,010 GRMZM2G481280 bhlh45 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 6,917,077 6,917,523 GRMZM2G148723 bhlh46 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 1,600,639 1,613,076 GRMZM2G065374 bhlh47 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 283,670,986 283,676,031 GRMZM2G027068 bhlh48 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 291,976,341 291,978,412 GRMZM2G137374 bhlh49 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 6,562,587 6,564,261 GRMZM2G116785 bhlh5 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 107,553,355 107,556,923 GRMZM2G137380 bhlh50 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 6,567,359 6,573,560 GRMZM2G139372 bhlh51 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 238,494,709 238,498,244 GRMZM5G812883 bhlh52 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 39,775,178 39,776,044 GRMZM2G111146 bhlh53 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 198,825,972 198,829,612 AC193786.3_FG005 bhlh54 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 157,462,749 157,463,805 GRMZM2G030762 bhlh55 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 162,106,868 162,110,024 GRMZM2G072376 bhlh56 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 36,921,186 36,922,008 GRMZM2G159937 bhlh57 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 204,715,844 204,717,904 AC198518.3_FG005 bhlh58 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 107,386,150 107,387,495 GRMZM2G303463 bhlh59 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 227,935,074 227,939,134 GRMZM2G417597 bhlh6 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 190,350,810 190,353,409 GRMZM2G016756 bhlh60 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 5,102,185 5,106,027 GRMZM5G818776 bhlh61 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 39,756,428 39,757,291 GRMZM2G333582 bhlh62 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 21,912,581 21,916,036 GRMZM2G166642 bhlh63 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 3,342,194 3,344,518 GRMZM2G175955 bhlh64 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 182,200,079 182,224,660 GRMZM2G115960 bhlh68 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 48,806,991 48,810,673 GRMZM2G378653 bhlh69 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 102,204,171 102,210,509 GRMZM2G042920 bhlh7 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 142,141,640 142,143,666 GRMZM2G397755 bhlh70 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 5,777,497 5,779,734 GRMZM2G120021 bhlh71 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 257,791,786 257,797,338 GRMZM2G170559 bhlh72 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 155,134,147 155,137,380 GRMZM2G008898 bhlh73 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 233,050,785 233,053,965 GRMZM2G035156 bhlh74 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 15,133,264 15,135,363 GRMZM2G395549 bhlh75 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 113,451,859 113,489,330 GRMZM2G112629 bhlh76 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 29,613,767 29,617,374 GRMZM2G463133 bhlh77 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 138,472,851 138,478,264 GRMZM2G049686 bhlh78 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 178,465,632 178,471,112 GRMZM2G173862 bhlh79 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 171,949,309 171,951,373 GRMZM2G038479 bhlh8 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 195,089,318 195,090,145 GRMZM2G142932 bhlh80 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 205,425,915 205,430,161 GRMZM5G828396 bhlh81 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 192,065,332 192,068,032 GRMZM2G417164 bhlh82 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 78,660,104 78,661,278 GRMZM2G169947 bhlh83 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 29,652,992 29,653,739 GRMZM2G159456 bhlh84 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 15,267,736 15,269,173 GRMZM2G354618 bhlh85 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 39,739,891 39,740,988 GRMZM5G818643 bhlh86 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 129,994,890 129,998,161 GRMZM2G027563 bhlh87 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 115,302,848 115,305,396 GRMZM2G350165 bhlh88 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 181,310,638 181,313,797 AC216731.3_FG001 bhlh89 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 201,922,854 201,924,055 GRMZM2G407119 bhlh9 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 145,064,265 145,067,533 GRMZM2G153454 bhlh90 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 156,776,841 156,779,616 GRMZM2G049229 bhlh91 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 112,025,169 112,028,072 GRMZM2G164341 bhlh92 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 137,796,648 137,798,798 GRMZM5G899865 bhlh93 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 267,629,500 267,631,521 GRMZM5G849600 bhlh94 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 219,912,558 219,917,830 GRMZM2G107560 bhlh95 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 194,532,042 194,532,930 GRMZM2G172297 bhlh96 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 223,952,471 223,954,890 AC149829.2_FG004 bhlh97 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 151,395,822 151,396,321 GRMZM2G340177 bhlh98 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 80,126,699 80,131,343 GRMZM2G076636 bhlh99 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 29,235,609 29,238,897 GRMZM2G130953 bif1 Galli et al., 2015; and assigned by the Grassius project, (Yilmaz et al 2009) to iaa35 Chr8 18,321,199 18,323,290 GRMZM2G171822 bif2 Classical Gene Chr1 173,865,554 173,867,297 GRMZM5G864847 bif4 Galli et al, 2015; assigned by the Grassius project, (Yilmaz et al 2009) to iaa27 Chr6 130,188,997 130,190,406 GRMZM2G148937 bige1 Suzuki et al., 2015 Chr5 1,543,960 1,547,006 GRMZM2G114793 bip1 Classical Gene Chr5 69,354,043 69,357,915 GRMZM2G415007 bip2 from: BT041486 Chr4 240,596,989 240,600,763 GRMZM2G471196 bip3 from Li et al 2012 Chr5 7,364,184 7,366,162 GRMZM2G109326 bk2 alignment to cDNA Chr9 123,497,640 123,499,951 GRMZM5G844562 bm1 Classical Gene Chr5 99,030,278 99,034,633 GRMZM2G347056 bm2 Tang et al., 2013 Chr1 292,165,519 292,171,793 AC196475.3_FG004 bm3 Classical Gene Chr4 32,278,881 32,280,752 GRMZM2G393334 bm4 Li et al, 2014 Chr9 154,723,992 154,730,009 GRMZM2G142832 bnl10.13a Chr10 137,853,898 137,858,727 GRMZM2G153127 bnl8.15 Chr3 2,060,989 2,068,244 GRMZM2G067371 bnl9.11b(lts) Chr1 73,517,191 73,520,282 GRMZM2G063162 bnl(pho80) from: T14681 Chr5 139,395,266 139,403,105 GRMZM5G805008 bpd1 Chen et al., 2014 Chr7 37,739,239 37,740,147 GRMZM2G315375 br2 by AY366085 sequence Chr1 202,334,824 202,342,008 GRMZM2G107322 brc1 Chr4 232,045,412 232,047,833 GRMZM2G047684 brc2 Chr9 86,578,789 86,581,528 GRMZM5G852663 brc2 Chr9 86,651,469 86,654,199 Zm00001d046422 brc2 Chr9 88,938,385 88,941,121 GRMZM2G103773 brd1 from Makervitch et al 2012 Chr1 249,371,977 249,376,239 GRMZM2G048294 bri1a Kir et al., 2015 Chr8 154,615,633 154,619,705 GRMZM2G449830 bri1b Kir et al., 2015 Chr5 60,684,674 60,686,106 GRMZM5G842058 brk1 Classical Gene Chr5 216,747,837 216,749,400 GRMZM5G842058 brk1 from maize Cell Genomics Project (Oct 2013) Chr5 216,747,837 216,749,400 GRMZM2G180150 brk3 Facette, MR et al. 2015 Chr10 2,033,382 2,034,248 GRMZM5G886363 brk3 Facette, MR et al. 2015 Chr10 2,011,814 2,017,183 GRMZM2G092604 brl1 Kir et al., 2015 Chr7 79,119,386 79,123,848 GRMZM2G002515 brl2 Kir et al., 2015 Chr1 113,534,938 113,538,490 GRMZM2G438007 brl3 Kir et al., 2015 Chr4 65,769,675 65,773,352 GRMZM2G163849 brm1 Nelissen et al., 2015 Chr5 68,902,393 68,913,355 GRMZM2G065635 brs1 aligns to cDNA Chr1 30,536,285 30,542,652 GRMZM2G062788 bsd2 Classical Gene Chr1 158,329,236 158,340,592 GRMZM2G170161 bsdtf1 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 226,346,872 226,351,462 GRMZM2G368898 bsdtf10 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 146,122,401 146,124,707 GRMZM2G013378 bsdtf2 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 41,600,483 41,602,814 GRMZM5G870572 bsdtf3 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 33,727,744 33,735,419 GRMZM2G127548 bsdtf4 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 164,281,187 164,285,309 GRMZM2G451806 bsdtf5 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 121,089,794 121,095,789 GRMZM2G145594 bsdtf6 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 204,479,884 204,482,990 GRMZM2G111672 bsdtf7 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 170,460,497 170,462,364 GRMZM2G027535 bsdtf8 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 172,530,034 172,533,971 GRMZM2G167207 bsdtf9 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 14,848,000 14,852,986 GRMZM2G168552 bss1 from Virlouvet et al., 2011 Chr8 156,640,234 156,641,211 GRMZM2G144081 bt1 Classical Gene Chr5 112,964,229 112,966,353 GRMZM2G068506 bt2 Classical Gene Chr4 58,979,526 58,985,686 GRMZM2G068506 bt2 Chr4 58,979,526 58,985,686 GRMZM2G041881 btf3 Chr1 2,798,951 2,801,848 GRMZM2G105750 bub1 from XP_008650955; Su et al., 2017 Chr7 151,985,560 152,001,155 GRMZM5G899300 bub3 from: NP_001149777; Su et al., 2017 Chr9 20,608,590 20,614,721 GRMZM2G366698 bv1 Avila et al, 2016 Chr5 160,747,586 160,759,982 GRMZM2G085381 bx1 Classical Gene Chr4 3,260,762 3,263,006 GRMZM2G085381 bx1 Chr4 3,260,762 3,263,006 GRMZM2G311036 bx10 from Meihls et al Chr1 66,310,637 66,312,743 GRMZM2G336824 bx11 from Meihls et al 2013 Chr1 66,393,409 66,395,849 GRMZM2G023325 bx12 from Meihls et al 2013 Chr1 66,506,457 66,507,471 AC148152.3_FG005 bx13 Handrick et al., 2016 Chr2 231,952,642 231,954,277 GRMZM2G127418 bx14 Handrick et al., 2016 Chr2 144,827,059 144,828,816 GRMZM2G085661 bx2 alignment of sequence Y11368 to B73_v2 (Oct 2011) Chr4 3,265,213 3,267,368 GRMZM2G085661 bx2 Classical Gene Chr4 3,265,213 3,267,368 GRMZM2G167549 bx3 Classical Gene Chr4 3,003,162 3,005,932 GRMZM2G167549 bx3 from Butron et al 2010 Chr4 3,003,162 3,005,932 GRMZM2G172491 bx4 Classical Gene Chr4 3,051,215 3,054,036 GRMZM2G172491 bx4 from Butron et al 2010 Chr4 3,051,215 3,054,036 GRMZM2G063756 bx5 Classical Gene Chr4 3,112,925 3,115,501 GRMZM2G063756 bx5 from Butron et al 2010 Chr4 3,112,925 3,115,501 GRMZM6G617209 bx6 from: EU960746; in v3 Chr4 1,252,638 1,254,044 GRMZM2G441753 bx7 alignment to cDNA EU192149; note there is gap in the BAC sequence at this region so gene model is not complete Chr4 18,244,663 18,245,553 GRMZM2G085054 bx8 from alignment of cDNA EU968182.1 to B73 v2 genome (Oct 2011 M Schaeffer) Chr4 3,214,647 3,216,558 GRMZM2G161335 bx9 From alignment of AY107409 Chr1 180,333,582 180,335,486 GRMZM2G165390 bz1 Classical Gene Chr9 11,779,648 11,781,406 GRMZM2G016241 bz2 Classical Gene Chr1 241,430,768 241,432,121 GRMZM2G117851 bzip1 from: AY685208 Chr3 212,260,636 212,276,109 GRMZM2G136266 bzip10 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 7,921,801 7,925,637 GRMZM2G033413 bzip100 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 8,230,021 8,240,287 GRMZM2G129247 bzip101 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 150,274,418 150,276,924 GRMZM2G159134 bzip102 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 186,805,980 186,810,898 GRMZM2G092609 bzip103 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 170,106,632 170,111,141 GRMZM2G098904 bzip104 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 87,150,348 87,153,356 GRMZM2G056099 bzip105 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 134,188,555 134,195,791 GRMZM2G055413 bzip106 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 83,866,787 83,869,911 GRMZM2G094352 bzip107 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 49,989,443 49,992,484 GRMZM2G033230 bzip108 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 120,135,941 120,137,704 GRMZM2G366264 bzip109 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 5,534,459 5,537,102 GRMZM2G079365 bzip110 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 213,863,947 213,880,121 GRMZM2G073427 bzip111 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 170,592,733 170,597,621 GRMZM2G445575 bzip113 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 143,949,572 143,957,213 GRMZM2G428184 bzip114 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 5,738,361 5,741,644 GRMZM2G157177 bzip115 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 32,163,794 32,172,639 GRMZM2G132868 bzip116 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 100,221,799 100,225,360 AC233853.1_FG002 bzip117 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 3,820,878 3,822,105 GRMZM2G164848 bzip118 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 168,467,346 168,469,169 GRMZM2G120167 bzip119 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 16,152,931 16,158,076 GRMZM2G052102 bzip120 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 227,156,011 227,158,307 GRMZM2G112483 bzip121 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 33,969,678 33,974,472 GRMZM2G171912 bzip122 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 17,665,206 17,666,030 GRMZM2G002075 bzip123 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 186,805,631 186,808,459 GRMZM2G151295 bzip124 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 131,353,502 131,359,160 GRMZM2G008166 bzip125 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 111,882,466 111,885,951 AC186606.4_FG003 bzip126 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 182,653,546 182,654,452 GRMZM2G175280 bzip127 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 197,089,134 197,092,935 GRMZM2G020799 bzip13 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 204,603,643 204,604,321 GRMZM2G153144 bzip14 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 74,180,653 74,185,259 GRMZM2G402862 bzip15 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 83,701,174 83,703,062 GRMZM2G144480 bzip16 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 197,332,482 197,333,254 GRMZM2G444748 bzip160 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 74,948,230 74,950,097 GRMZM2G103647 bzip17 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 109,162,612 109,164,995 GRMZM5G848942 bzip19 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 210,000,778 210,007,937 GRMZM2G170079 bzip20 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 173,480,420 173,483,149 GRMZM2G368491 bzip21 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 227,566,001 227,567,569 GRMZM2G043600 bzip22 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 140,743,498 140,746,868 GRMZM5G821024 bzip23 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 140,955,847 140,960,153 GRMZM2G038015 bzip24 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 49,087,360 49,088,276 GRMZM2G080731 bzip25 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 119,662,868 119,665,630 GRMZM2G177046 bzip26 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 281,401,644 281,402,596 GRMZM2G131961 bzip27 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 6,719,168 6,724,854 GRMZM2G029979 bzip28 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 122,676,355 122,688,947 GRMZM2G138340 bzip29 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 291,173,937 291,177,741 GRMZM2G074373 bzip3 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 98,816,200 98,821,699 GRMZM2G370026 bzip31 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 179,860,588 179,861,190 GRMZM5G884349 bzip32 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 62,486,203 62,490,700 GRMZM2G045236 bzip34 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 147,087,480 147,092,015 GRMZM2G407631 bzip35 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 98,758,805 98,759,314 GRMZM2G080111 bzip36 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 101,670,496 101,671,080 GRMZM2G088140 bzip37 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 37,914,656 37,954,097 GRMZM2G073892 bzip38 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 217,591,763 217,592,969 GRMZM2G479760 bzip4 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 210,099,032 210,100,747 AC203957.3_FG004 bzip40 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 175,112,514 175,113,156 GRMZM2G019446 bzip41 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 288,150,005 288,174,446 GRMZM2G160136 bzip42 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 47,233,315 47,236,145 GRMZM2G149150 bzip43 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 194,939,730 194,943,802 GRMZM2G438293 bzip44 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 165,990,148 165,991,775 GRMZM2G093020 bzip45 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 143,352,528 143,354,301 GRMZM2G037910 bzip46 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 194,763,066 194,765,126 AC200057.4_FG007 bzip47 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 140,723,278 140,728,024 GRMZM2G160902 bzip48 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 128,957,708 128,959,418 GRMZM2G478417 bzip49 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 199,519,465 199,525,696 GRMZM2G358701 bzip5 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 123,688,845 123,694,048 GRMZM2G336766 bzip50 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 234,937,825 234,938,696 GRMZM2G438652 bzip51 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 3,077,372 3,078,435 GRMZM2G174284 bzip52 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 51,753,616 51,759,590 GRMZM2G027976 bzip53 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 196,217,599 196,220,887 GRMZM2G361847 bzip54 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 174,267,403 174,273,062 GRMZM2G386273 bzip55 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 5,632,236 5,633,262 GRMZM2G019907 bzip56 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 187,349,410 187,394,170 GRMZM2G149040 bzip58 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 173,190,014 173,195,685 GRMZM2G396632 bzip59 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 119,010,423 119,011,019 GRMZM2G039828 bzip6 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 11,637,318 11,638,804 GRMZM2G025812 bzip60 B73_v2 alignment to cDNA AY104864 Chr9 100,855,159 100,857,284 GRMZM2G137046 bzip61 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 112,670,143 112,675,317 GRMZM2G332294 bzip62 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 196,404,600 196,407,477 GRMZM2G011119 bzip63 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 189,210,328 189,213,307 GRMZM2G473274 bzip64 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 153,788,422 153,790,144 GRMZM2G180847 bzip65 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 194,071,950 194,077,869 GRMZM2G342424 bzip66 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 58,361,634 58,369,149 GRMZM2G365754 bzip67 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 5,921,816 5,922,855 GRMZM2G157722 bzip68 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 57,698,284 57,703,555 GRMZM2G111504 bzip69 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 186,117,899 186,119,612 GRMZM2G006578 bzip7 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 133,162,136 133,172,180 GRMZM2G060290 bzip70 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 101,925,918 101,931,804 GRMZM2G019106 bzip71 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 239,534,487 239,538,429 GRMZM2G030280 bzip72 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 1,640,229 1,650,451 GRMZM2G175870 bzip73 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 156,230,705 156,237,177 GRMZM2G358796 bzip74 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 129,930,503 129,931,378 GRMZM2G168079 bzip75 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 166,357,554 166,362,143 GRMZM2G134863 bzip76 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 96,717,113 96,724,364 GRMZM2G066734 bzip77 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 135,645,489 135,646,430 GRMZM2G353553 bzip78 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 81,928,301 81,930,832 GRMZM2G030877 bzip79 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 188,665,527 188,672,962 GRMZM2G146020 bzip8 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 142,765,244 142,769,768 GRMZM2G140355 bzip80 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 85,130,086 85,132,905 AC190609.3_FG001 bzip81 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 194,461,406 194,464,593 GRMZM2G137532 bzip82 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 189,016,699 189,017,193 GRMZM2G000171 bzip83 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 61,724,734 61,728,541 GRMZM2G361611 bzip84 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 239,887,667 239,890,292 GRMZM2G125934 bzip85 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 190,471,098 190,480,166 GRMZM2G171370 bzip86 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 161,590,575 161,596,682 GRMZM2G000842 bzip87 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 149,721,944 149,728,050 GRMZM2G425920 bzip88 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 122,253,987 122,259,270 GRMZM2G158313 bzip89 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 144,011,521 144,013,252 GRMZM2G092137 bzip9 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 83,788,712 83,791,125 AC232238.2_FG004 bzip90 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 166,341,735 166,349,613 GRMZM2G060109 bzip91 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 214,613,200 214,616,521 GRMZM2G077124 bzip92 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 174,321,118 174,323,831 GRMZM2G050912 bzip93 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 93,665,910 93,671,589 GRMZM5G858197 bzip95 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 175,672,623 175,675,787 GRMZM2G161009 bzip96 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 119,246,143 119,249,647 GRMZM2G122846 bzip97 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 165,667,701 165,668,420 GRMZM2G062391 bzip98 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 56,217,970 56,223,418 GRMZM5G812774 bzr1 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 77,471,270 77,474,631 GRMZM5G852801 bzr2 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 5,297,544 5,298,608 GRMZM2G307241 bzr3 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 229,089,140 229,092,844 GRMZM2G446515 bzr4 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 62,317,634 62,323,803 GRMZM2G069486 bzr5 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 239,624,836 239,636,828 GRMZM5G868061 bzr6 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 10,517,485 10,518,461 AC194970.5_FG002 bzr7 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 207,890,126 207,891,291 GRMZM2G369018 bzr8 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 147,915,664 147,917,490 GRMZM2G152172 bzr9 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 8,453,673 8,455,727 GRMZM2G005066 c1 Classical Gene Chr9 9,746,518 9,747,591 GRMZM2G422750 c2 Classical Gene Chr4 192,758,391 192,761,788 GRMZM2G380515 c2h1 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 125,606,805 125,613,287 GRMZM5G885700 c2h133 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 172,058,302 172,062,571 GRMZM2G074032 c2h2 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 144,292,832 144,296,553 GRMZM2G465595 c2h25 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 31,769,080 31,772,988 GRMZM2G050939 c2h26 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 29,281,533 29,285,348 GRMZM2G023988 c2h3 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 175,731,230 175,738,132 GRMZM2G068710 c2h35 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 10,140,592 10,148,973 GRMZM2G175000 c2h4 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 40,052,653 40,057,169 GRMZM2G136494 c2h46 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 148,529,899 148,531,915 GRMZM2G470422 c2h5 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 296,848,076 296,849,261 GRMZM2G119640 c3h1 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 237,433,598 237,440,210 GRMZM2G147623 c3h10 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 114,431,775 114,441,385 GRMZM2G146514 c3h11 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 20,203,138 20,224,156 GRMZM2G069009 c3h12 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 36,833,446 36,838,605 GRMZM2G087032 c3h13 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 161,685,821 161,692,051 GRMZM2G150262 c3h14 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 147,037,098 147,041,632 GRMZM2G099622 c3h15 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 206,567,610 206,570,522 GRMZM2G071034 c3h16 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 3,094,658 3,099,169 GRMZM2G180979 c3h17 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 263,796,852 263,800,378 GRMZM2G151689 c3h18 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 101,513,894 101,516,776 GRMZM2G100794 c3h19 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 122,860,183 122,884,420 GRMZM2G306357 c3h2 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 219,556,286 219,569,553 GRMZM2G311665 c3h20 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 173,486,547 173,490,629 GRMZM2G157927 c3h21 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 214,832,691 214,834,785 GRMZM2G422205 c3h22 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 225,673,226 225,688,992 GRMZM2G475017 c3h23 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 4,955,650 4,961,914 GRMZM2G005126 c3h24 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 84,252,239 84,259,713 GRMZM5G849788 c3h25 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 173,803,063 173,806,170 GRMZM2G110402 c3h26 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 98,477,144 98,480,310 GRMZM5G845366 c3h27 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 12,394,277 12,396,390 GRMZM2G036837 c3h28 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 4,916,708 4,925,557 GRMZM2G089050 c3h29 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 58,232,976 58,237,550 GRMZM2G149347 c3h3 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 166,060,984 166,063,087 GRMZM2G123876 c3h30 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 294,963,341 294,966,931 GRMZM2G305582 c3h31 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 77,459,194 77,463,222 GRMZM5G842019 c3h32 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 158,715,746 158,718,906 AC233871.1_FG008 c3h33 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 1,823,275 1,825,348 GRMZM2G037200 c3h34 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 196,068,947 196,075,524 GRMZM2G086994 c3h35 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 36,943,805 36,949,840 GRMZM2G031827 c3h36 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 69,651,989 69,660,585 GRMZM2G171942 c3h37 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 17,672,604 17,674,106 GRMZM2G056920 c3h38 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 234,301,708 234,304,462 GRMZM5G801627 c3h39 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 132,847,404 132,849,278 GRMZM2G025014 c3h4 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 233,311,308 233,314,199 GRMZM2G177229 c3h40 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 133,562,993 133,564,875 GRMZM2G427438 c3h41 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 47,597,558 47,599,537 GRMZM2G024655 c3h42 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 5,908,910 5,912,846 GRMZM2G164359 c3h43 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 225,552,715 225,560,422 GRMZM2G162119 c3h44 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 130,398,102 130,399,300 GRMZM2G003424 c3h45 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 54,122,528 54,126,795 GRMZM2G039889 c3h46 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 143,230,970 143,239,777 GRMZM2G173124 c3h47 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 20,674,613 20,676,836 GRMZM2G044004 c3h48 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 230,611,403 230,615,986 GRMZM2G107491 c3h49 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 161,770,572 161,775,615 GRMZM2G395842 c3h5 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 44,938,811 44,971,017 GRMZM2G346113 c3h50 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 185,559,571 185,563,721 GRMZM2G068476 c3h51 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 262,230,777 262,236,243 GRMZM2G124476 c3h52 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 146,582,797 146,586,445 GRMZM2G020928 c3h53 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 164,773,159 164,775,979 GRMZM2G006493 c3h54 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 13,006,885 13,025,813 GRMZM2G086614 c3h6 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 132,165,988 132,170,589 GRMZM2G117007 c3h7 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 130,574,595 130,576,060 GRMZM2G315515 c3h8 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 31,410,265 31,411,096 GRMZM5G830949 c3h9 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 146,510,296 146,512,179 GRMZM2G026157 ca2p1 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 12,557,664 12,558,570 GRMZM2G165488 ca2p10 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 16,480,475 16,484,858 GRMZM2G104396 ca2p12 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 123,431,302 123,438,343 GRMZM5G857944 ca2p13 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 211,715,089 211,720,032 GRMZM2G096016 ca2p14 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 235,103,649 235,106,245 GRMZM2G038303 ca2p15 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 165,030,959 165,035,270 GRMZM2G091964 ca2p16 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 263,505,895 263,513,358 GRMZM2G582893 ca2p2 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 22,308,191 22,311,425 GRMZM2G037630 ca2p3 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 71,589,264 71,595,809 GRMZM2G040349 ca2p4 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 211,453,451 211,457,855 GRMZM5G853836 ca2p5 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 174,875,434 174,876,987 GRMZM5G829103 ca2p6 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 250,377,935 250,382,233 GRMZM2G126957 ca2p7 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 141,891,517 141,897,548 GRMZM2G361842 ca2p8 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 173,335,601 173,340,617 GRMZM5G865626 ca2p9 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 268,504,277 268,506,002 GRMZM2G303465 ca3p1 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 182,472,591 182,474,866 GRMZM2G480621 ca3p2 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 567,968 568,904 GRMZM2G169884 ca3p3 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 154,457,527 154,458,030 GRMZM2G384528 ca3p4 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 164,733,507 164,734,923 GRMZM2G074773 ca5p1 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 148,048,984 148,050,065 GRMZM2G440949 ca5p10 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 155,856,085 155,862,224 GRMZM2G089812 ca5p11 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 34,599,368 34,601,378 GRMZM2G022162 ca5p12 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 189,855,073 189,858,562 GRMZM2G113127 ca5p13 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 183,805,913 183,807,419 GRMZM2G174776 ca5p14 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 198,165,814 198,167,061 GRMZM2G099461 ca5p15 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 9,072,834 9,073,771 GRMZM2G078691 ca5p16 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 131,218,518 131,219,657 GRMZM2G052499 ca5p17 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 6,682,348 6,683,697 AC201832.3_FG006 ca5p18 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 119,573,868 119,575,960 GRMZM2G479610 ca5p2 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 163,223,636 163,224,280 GRMZM2G161680 ca5p3 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 93,659,875 93,665,056 GRMZM2G083964 ca5p4 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 298,942,487 298,959,287 GRMZM2G311316 ca5p5 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 57,549,401 57,552,804 GRMZM2G375448 ca5p6 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 163,213,351 163,214,685 GRMZM2G124421 ca5p7 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 110,476,000 110,480,388 GRMZM2G105317 ca5p8 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 225,260,746 225,264,684 GRMZM2G091433 ca5p9 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 191,046,626 191,052,377 GRMZM2G046070 cad1 from NM_001137309 Chr2 10,537,220 10,541,464 GRMZM2G121897 cadtfr10 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 68,729,341 68,730,919 GRMZM2G146286 cadtfr11 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 219,431,537 219,437,566 GRMZM2G167576 cadtfr12 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 37,856,306 37,857,363 GRMZM2G020305 cadtfr13 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 204,568,019 204,571,253 GRMZM2G152822 cadtfr14 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 16,202,771 16,203,691 GRMZM2G064426 cadtfr15 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 117,330,071 117,333,930 GRMZM2G012654 cadtfr16 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 68,994,825 68,997,112 GRMZM2G473152 cadtfr2 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 154,450,608 154,451,831 GRMZM2G147712 cadtfr3 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 72,873,166 72,879,736 GRMZM2G478501 cadtfr4 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 21,156,624 21,175,149 GRMZM2G444073 cadtfr5 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 30,460,409 30,461,221 GRMZM2G180947 cadtfr6 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 211,052,666 211,054,021 GRMZM2G124663 cadtfr7 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 164,127,479 164,128,599 GRMZM5G866699 cadtfr8 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 168,982,663 168,990,876 GRMZM5G809663 cadtfr9 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 106,425,069 106,426,667 GRMZM2G089222 caf1 aligns with AY264368 Chr7 42,230,925 42,231,874 GRMZM2G173923 caf1 Belcher et al. 2015 Chr7 42,211,043 42,244,189 AC199526.5_FG003 caf2 alignment of cDNA AY264369 GI:30349368 to B73_v2 (Jul 2011) Chr3 58,874,517 58,886,337 AC199526.5_FG003 caf2 Classical Gene Chr3 58,874,517 58,886,337 GRMZM2G121878 cah1 from Studer et al 2014 Chr3 215,547,876 215,555,228 GRMZM2G348512 cah2 from Studer et al 2014 Chr3 215,506,034 215,518,935 GRMZM2G348512 cah3 one of two gene associated with GRMZM2G34851 in B73_V2 (see Studer et al 2014) Chr3 215,506,034 215,518,935 GRMZM2G414528 cah4 from Studer et al 2014 Chr2 187,772,976 187,777,268 GRMZM2G145101 cah5 from Studer et al 2014 Chr7 127,621,256 127,626,940 GRMZM2G094165 cah6 from Studer et al 2014 Chr8 146,085,244 146,092,203 GRMZM2G117582 cal1 Classical Gene Chr6 155,708,190 155,712,626 GRMZM2G067511 cal2 Classical Gene Chr3 38,428,315 38,432,905 GRMZM2G152891 cal3 Classical Gene Chr1 52,092,838 52,096,639 GRMZM2G143205 camta1 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 70,964,747 70,973,190 GRMZM2G032336 camta2 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 149,639,376 149,658,357 GRMZM2G171600 camta3 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 158,938,555 158,944,768 GRMZM2G447551 camta4 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 19,788,672 19,813,731 GRMZM2G152661 camta5 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 109,591,875 109,599,342 GRMZM2G056014 cap1 Classical Gene Chr8 132,408,451 132,413,070 GRMZM2G141704 cap2 Chr1 42,849,862 42,855,504 GRMZM2G428096 cap2 Chr1 42,855,656 42,857,040 Zm00001d028687 cap2 v4 Chr1 43,083,284 43,088,852 GRMZM2G162426 cap3 from: AFW88771 Chr9 139,025,595 139,031,089 AC233878.1_FG004 cap4 Chr1 272,711,753 272,730,612 GRMZM2G065494 cas1 Chr4 238,310,811 238,319,374 GRMZM2G088212 cat1 Classical Gene Chr5 63,593,142 63,597,617 GRMZM2G090568 cat2 Classical Gene Chr1 7,153,870 7,156,146 GRMZM2G079348 cat3 Classical Gene Chr4 240,651,914 240,655,881 GRMZM5G809587 cax1 Chr8 78,171,551 78,175,986 GRMZM2G040017 cax2 aligns to sequence AB044567 in B73_v2 assembly Chr2 4,585,422 4,590,928 GRMZM2G011592 cax3 aligns to AY108295 on B73_v2 Chr3 227,277,700 227,282,452 GRMZM2G107575 cbl1 Zhang et al., 2016 Chr1 94,993,988 94,998,653 GRMZM2G116584 cbl10 Zhang et al., 2016 Chr3 220,604,800 220,608,677 GRMZM2G007555 cbl11 Zhang et al., 2016 Chr1 167,215,863 167,225,574 GRMZM2G137751 cbl12 Zhang et al., 2016 Chr2 30,021,407 30,023,024 GRMZM2G173424 cbl2 Zhang et al., 2016 Chr3 115,377,120 115,403,275 GRMZM2G112672 cbl3 Zhang et al., 2016 Chr1 253,698,726 253,716,291 GRMZM2G001221 cbl4 Zhang et al., 2016 Chr6 159,455,359 159,458,229 GRMZM2G041729 cbl5 Zhang et al., 2016 Chr3 223,169,117 223,172,637 GRMZM2G010093 cbl6 Zhang et al., 2016 Chr10 7,732,074 7,735,779 GRMZM2G033680 cbl7 Zhang et al., 2016 Chr10 7,869,640 7,874,007 GRMZM2G110080 cbl8 Zhang et al., 2016 Chr4 220,865,888 220,867,679 GRMZM2G015324 cbl9 Zhang et al., 2016 Chr9 114,480,823 114,485,894 GRMZM2G113453 cbp1 from: L01496 Chr5 174,362,481 174,368,947 GRMZM2G018837 cbp2 Chr4 235,806,854 235,815,316 GRMZM2G416388 cbs1 aligns with sequence in Avramova et al., 1996 (Fig 3) and Sorghum BAC sequence AF124045 in the syntenous region. Chr1 273,932,226 273,937,442 GRMZM2G014902 cca1 from: EU955544; and assigned by the Grassius project, (Yilmaz et al 2009) to mybr79 Chr4 32,527,798 32,560,791 GRMZM2G062772 ccamk1 B73_v2 alignment to seqeunce accession DQ403196 (referenced in Ma et al 2012) Chr4 201,540,262 201,543,535 GRMZM2G158657 ccd7 Owens et al., 2014 Chr2 20,083,041 20,085,698 GRMZM2G446858 ccd8 Guan et al., 2012 Chr3 197,085,779 197,089,273 GRMZM2G098298 ccp1 Classical Gene Chr5 158,904,820 158,908,319 GRMZM2G038636 ccp2 Classical Gene Chr7 122,016,558 122,021,703 GRMZM2G073465 ccp3 Chr10 144,912,181 144,916,261 GRMZM2G066326 ccp5 alignment to cDNAs Chr6 39,529,235 39,530,882 GRMZM2G170457 ccr1 Chr1 290,295,024 290,298,191 GRMZM2G064896 ccr2 Chr2 149,136,004 149,139,243 GRMZM2G038301 ccs1 Belcher et al., 2015 Chr1 281,272,122 281,275,134 GRMZM2G381691 cct1 from coordinates in Hung et al 2012 Chr10 94,262,291 94,264,845 GRMZM2G082924 cda1 Chr7 24,237,831 24,240,669 GRMZM2G008216 cda2 Chr2 170,859,967 170,862,507 GRMZM2G008327 cdc2 EU961894 Chr1 3,872,113 3,877,700 GRMZM2G063192 cdc201 Zheng et al., 2016 Chr4 159,201,602 159,204,082 GRMZM2G130425 cdc202 Zheng et al., 2016 Chr5 137,431,853 137,435,424 GRMZM2G134917 cdj1 Chr1 285,992,073 285,995,271 GRMZM2G364069 cdj2 Classical Gene Chr1 250,153,164 250,156,813 GRMZM2G166771 cdk8 Nunez-Rios et al., 2017 Chr5 45,567,569 45,573,392 GRMZM2G119494 cdo1081a from: EU969516 Chr1 5,338,770 5,342,488 GRMZM2G115518 cdpk1 from sequence D84507 Chr5 60,830,003 60,836,777 GRMZM2G320506 cdpk10 from: AJ007366 Chr5 4,670,693 4,674,066 GRMZM2G047486 cdpk11 Chr2 136,808,741 136,813,600 GRMZM2G173928 cdpk13 from: D84508 Chr6 84,540,654 84,547,361 GRMZM2G178756 cdpk14 from: EU946805 Chr6 62,895,992 62,899,068 GRMZM2G365815 cdpk2 from: EU958676 Chr2 149,142,039 149,144,480 GRMZM2G168706 cdpk3 from alignment of cDNA sequence D85039 to B73_V2 Chr2 203,612,491 203,616,678 GRMZM2G321239 cdpk4 from sequence D87042 alignment to B73_V2 Chr10 134,942,355 134,946,973 GRMZM2G314396 cdpk5 Chr2 14,545,463 14,553,791 GRMZM2G081310 cdpk7 from: L15390 Chr4 157,020,786 157,026,774 GRMZM2G154489 cdpk8 from: U28376 Chr7 152,988,408 152,989,553 GRMZM2G322186 cef1 From Entrez Gene 100284775 Chr3 49,620,840 49,626,586 GRMZM2G158526 cenH3 From homology to cDNA sequence Chr6 155,443,675 155,448,220 GRMZM2G114315 cenpc1 Chr3 218,621,155 218,631,182 GRMZM2G112336 cesa1 Classical Gene Chr8 79,738,607 79,744,724 GRMZM2G445905 cesa10 from: AY372244 Chr1 234,316,246 234,326,747 GRMZM2G055795 cesa11 from: AY372245 Chr3 198,438,731 198,444,359 GRMZM2G142898 cesa12 from: AY372246 Chr7 117,546,197 117,550,877 GRMZM2G037413 cesa13 Xiao et al., 2017 Chr2 29,981,034 29,986,917 GRMZM2G027723 cesa2 Classical Gene Chr6 128,743,576 128,750,030 GRMZM2G039454 cesa3 Classical Gene Chr3 11,648,913 11,655,958 GRMZM2G424832 cesa4 from: EU942461 Chr7 18,620,330 18,626,341 GRMZM2G111642 cesa5 Classical Gene Chr1 290,666,783 290,672,751 GRMZM2G113137 cesa6 Classical Gene Chr1 296,334,073 296,339,855 GRMZM2G025231 cesa7 Classical Gene Chr7 37,037,007 37,042,784 GRMZM2G177631 cesa8 Classical Gene Chr7 26,503,597 26,509,680 GRMZM2G018241 cesa9 Classical Gene Chr2 161,757,546 161,763,704 GRMZM2G026117 cf1 Classical Gene Chr5 84,284,464 84,288,424 GRMZM5G813259 cfm1 Chr6 162,967,857 162,970,961 GRMZM2G094072 cfm2 from alignment to sequence EU047713 Chr10 123,593,979 123,609,810 GRMZM2G436001 cfm3 from alignment to sequence EU084957 Chr2 228,710,700 228,721,042 GRMZM2G142740 cfm4 Chr7 98,272,614 98,278,027 AC214507.3_FG001 cfm6 from: DQ402046 Chr10 125,952,699 125,954,050 GRMZM2G022489 cg1 Chr3 7,774,552 7,776,125 GRMZM2G113873 cgs1 Chr9 118,703,401 118,709,158 GRMZM2G155329 chi1 Classical Gene Chr1 293,118,119 293,119,647 GRMZM2G155329 chi1 from alignment with sequence EU964968 for chi1, Chr1 293,118,119 293,119,647 GRMZM2G119186 chi3 from BLAST to chi1 sequence, mapping data; and synteny with barley and rice Chr5 2,496,042 2,497,691 GRMZM2G043453 chld1 Chr5 3,095,928 3,103,654 GRMZM2G323024 chlh1 Chr10 147,389,924 147,396,098 GRMZM2G453805 chn1 Chr3 212,090,496 212,091,850 GRMZM2G145461 chn2 Classical Gene Chr6 83,025,839 83,027,065 GRMZM2G389582 chn3 Classical Gene Chr5 63,306,100 63,308,250 GRMZM2G170734 chph1 Owens et al., 2014 Chr7 62,149,059 62,150,389 GRMZM2G127421 chph2 Chr1 239,887,471 239,889,132 GRMZM2G177165 chr101 Chr2 237,177,008 237,182,832 GRMZM2G071025 chr106 from ENTREZ GENE 100273981 Chr1 270,318,386 270,325,104 GRMZM2G097289 chr122 Chr10 89,218,737 89,223,927 GRMZM2G130739 chr124 split gene model Chr1 235,255,302 235,258,327 GRMZM2G435541 chr124 split gene model Chr1 235,254,537 235,254,864 GRMZM6G007923 chs1 from: BT042386 & DQ244778 Chr10 18,758,297 18,761,647 GRMZM2G009443 cip1 Classical Gene Chr10 35,591,531 35,598,325 GRMZM2G174896 cipk3 Chr1 52,148,170 52,153,288 GRMZM2G383240 cipk8 Chr3 372,718 380,906 Zm00001d000080 cipk8 B73V4_ctg31 421,411 431,957 GRMZM2G028521 citt1 Chr1 10,540,341 10,544,903 GRMZM2G143602 cka1 Classical Gene Chr2 236,711,216 236,716,685 GRMZM2G047855 cka2 Classical Gene Chr1 279,484,878 279,490,883 GRMZM5G845755 cka4 Chr7 2,138,862 2,144,213 GRMZM5G857992 ckb1 Chr2 21,659,964 21,665,567 GRMZM2G116885 cki1 Chr1 232,980,076 232,983,251 GRMZM2G037926 cki2 Xiao et al., 2017 Chr5 29,641,580 29,644,988 GRMZM2G157510 cki3 Xiao et al., 2017 Chr1 8,442,682 8,446,230 GRMZM2G358931 cki4 Xiao et al., 2017 Chr9 152,252,293 152,255,778 GRMZM2G101613 cki5 Xiao, Q Chr5 209,770,434 209,772,179 GRMZM2G084570 cki6 Xiao et al., 2017 Chr4 178,774,992 178,776,727 Zm00001d052174 cki6 v4 Chr4 181,715,802 181,717,531 GRMZM2G343769 cki7 Xiao et al., 2017 Chr9 7,870,479 7,871,904 GRMZM2G154414 cki8 Xiao et al., 2017 Chr4 5,410,267 5,411,691 GRMZM2G146644 cko1 Classical Gene Chr3 7,601,132 7,605,870 GRMZM2G146644 cko1 from Mameaux et al 2012 Chr3 7,601,132 7,605,870 GRMZM2G050997 cko2 from maize Cell Genomics Project (Oct 2013) Chr3 152,240,440 152,243,093 GRMZM2G167220 cko3 alignment to AJ606943, and chr 8 genetic map position (Massonneau 2004) Chr8 158,737,677 158,740,474 GRMZM5G817173 cko4 from sequence AW506922 and GU160398 Chr3 191,899,705 191,903,570 GRMZM2G024476 cko4b from position in SUPL Table S1 of Vyroubalova et al 2009 Chr8 171,917,567 171,921,620 GRMZM2G325612 cko5 from alignment of AQ844401 and GU160400 Chr8 22,250,244 22,254,270 GRMZM2G348452 ckx10 from alignment of B73_v2 to FJ269181 Chr1 207,753,174 207,757,725 GRMZM2G122340 ckx11 assigned by Gu et al 2010 Chr10 131,816,214 131,824,636 GRMZM2G008792 ckx12 pre Vyroubalova et al 2009 Chr2 28,171,679 28,176,605 GRMZM2G404443 ckx6 from GU160401 Chr1 230,073,700 230,077,262 GRMZM2G114427 ckx7 as assigned by Gu et al 2010 Chr4 230,558,257 230,560,081 GRMZM2G134634 ckx8 from SUPL table S1 of Vryoubalova et al 2009 Chr4 230,648,266 230,650,090 GRMZM2G162048 ckx8b aligns to sequece GU160402 for cko8 (Gu et al 2010; Vyroubalova et al 2009) Chr4 230,722,879 230,724,687 GRMZM2G303707 ckx9 based on AC194337.2-contig42 per Vyroubalova Chr9 81,495,589 81,497,784 GRMZM2G064868 cld1 Chr4 29,145,785 29,159,221 AC191109.3_FG001 cle14 Je et al., 2016 Chr2 228,749,730 228,750,254 GRMZM5G818232 cle16 Je et al., 2016 Chr9 141,708,812 141,709,096 GRMZM2G008651 cle20 Je et al., 2016 Chr7 162,750,384 162,751,038 GRMZM5G826174 cle21 Je et al., 2016 Chr1 226,281,053 226,281,753 GRMZM2G070192 cle22 Je et al., 2016 Chr6 158,463,657 158,465,175 GRMZM2G098918 cle23 Je et al., 2016 Chr5 54,443,972 54,445,002 GRMZM2G123818 cle24 Je et al., 2016 Chr4 169,575,895 169,576,594 GRMZM2G525788 cle25 from: LOC103644665 Chr1 63,215,440 63,215,543 GRMZM2G473147 cle26 Je et al., 2016 Chr8 17,245,262 17,246,579 GRMZM2G468688 cle27 Je et al., 2016 Chr10 132,555,330 132,555,915 GRMZM5G875999 cle5 Je et al., 2016 Chr5 13,148,983 13,151,122 GRMZM2G052776 cle6 Chr3 196,510,926 196,511,186 GRMZM2G372364 cle7 Je et al., 2016 Chr4 7,570,324 7,571,104 GRMZM2G056373 clpp2 from Arabidopsis clpp1 AB022326 & maize BT065143 Chr1 49,617,140 49,619,406 GRMZM2G134668 clx1 Chr2 62,121,211 62,125,114 GRMZM2G022180 clx2 Chr10 112,603,406 112,606,897 GRMZM5G859195 cmk1 Entrez Gene 100282760 Chr3 187,980,568 187,985,888 GRMZM2G075333 cml1 Chr5 89,189,678 89,194,264 GRMZM2G116087 cmu1 aligns to sequence EU968465.1 GI:195642229 Chr8 172,665,323 172,669,357 GRMZM2G179454 cmu2 aligns to sequence EU951879.1 GI:195604333 Chr5 92,220,297 92,223,624 GRMZM2G131205 cncr1 Chr1 211,567,137 211,573,211 GRMZM2G131836 cncr2 Chr7 47,738,518 47,740,886 GRMZM2G097030 cngt1 from sequence FJ748891 Chr7 23,728,517 23,730,596 GRMZM2G169365 cnh1 Chr9 151,083,033 151,087,840 GRMZM2G012717 col10 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 117,553,493 117,555,386 GRMZM2G095598 col11 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 33,216,134 33,217,640 GRMZM2G041991 col12 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 204,659,225 204,661,268 GRMZM2G038783 col13 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 108,447,974 108,449,794 GRMZM2G042198 col14 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 162,885,359 162,891,594 GRMZM2G144346 col2 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 267,460,450 267,462,897 GRMZM2G021777 col3 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 183,418,226 183,419,769 GRMZM2G107886 col4 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 31,881,581 31,883,549 GRMZM2G075562 col5 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 204,223,654 204,228,519 GRMZM2G013398 col6 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 39,579,626 39,585,243 AC233888.1_FG002 col7 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 127,941,747 127,942,849 GRMZM2G114137 col8 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 11,383,616 11,385,590 GRMZM2G167560 col9 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 165,343,973 165,348,286 GRMZM2G405368 conz1 Classical Gene Chr9 35,635,308 35,639,846 GRMZM2G143354 cop1 Chr3 137,371,268 137,378,912 GRMZM2G028929 cop2 Chr10 141,389,160 141,394,314 GRMZM2G111477 cpn1 from: Z12114; overlap with GRMZM2G458208 Chr5 31,014,041 31,015,732 GRMZM2G458208 cpn1 overlap with GRMZM2G111477 Chr5 31,022,591 31,026,410 GRMZM2G091189 cpn10 from: T18415 Chr4 176,529,663 176,531,725 GRMZM2G416120 cpn2 from: Z12115 Chr1 234,834,523 234,840,412 GRMZM2G153754 cpp1 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 9,332,269 9,337,505 GRMZM2G701689 cpp10 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 119,999,294 120,014,210 GRMZM2G059678 cpp11 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 195,307,506 195,312,044 GRMZM2G342588 cpp12 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 122,278,172 122,285,658 AC203865.3_FG001 cpp13 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 119,995,077 119,998,350 GRMZM2G015097 cpp2 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 171,249,195 171,254,764 GRMZM2G173198 cpp3 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 121,766,217 121,767,657 GRMZM2G060170 cpp4 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 158,012,795 158,016,012 GRMZM2G322090 cpp5 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 171,296,402 171,301,898 GRMZM2G366584 cpp6 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 252,868,475 252,877,327 GRMZM2G104246 cpp7 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 172,942,841 172,947,390 GRMZM2G096600 cpp8 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 121,748,701 121,752,582 GRMZM2G388148 cpp9 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 134,229,441 134,245,208 GRMZM2G044481 cpps2 from alignment to genomic sequence Chr1 79,711,199 79,714,961 GRMZM2G068808 cpps3 from: CF634281 Chr10 75,822,918 75,828,439 GRMZM2G156565 cps1 Chr1 295,555,161 295,563,804 AC215201.3_FG005 cps2 Chr6 142,273,603 142,277,674 GRMZM2G566786 cps5 Chr8 10,072,049 10,076,873 GRMZM5G858471 cps5 Belcher et al., 2015 Chr8 10,078,647 10,080,295 Zm00001d008497 cps5 v4 Chr8 10,439,104 10,447,983 GRMZM2G048821 cptk1 Chr1 79,243,435 79,249,210 GRMZM2G032282 cpx2 from alignment of cDNA DQ250641 to B73 AGP_v2 (MLS) Chr10 141,340,391 141,349,914 GRMZM2G051637 cr4 Classical Gene Chr10 5,591,911 5,595,821 GRMZM2G051637 cr4 Chr10 5,591,911 5,595,821 GRMZM2G083950 crp1 Classical Gene Chr7 155,872,362 155,876,338 GRMZM5G802566 crp11 Chr7 131,855,975 131,859,128 GRMZM2G377761 crp4 provided by Barkan (2010) Chr7 8,183,160 8,199,889 GRMZM2G040736 crr1 from Cell Genomics project (Oct 2013) Chr2 2,084,221 2,085,003 GRMZM2G392101 crr2 Classical Gene Chr10 147,279,947 147,281,251 GRMZM2G319187 crr4 Chr8 157,499,048 157,505,111 GRMZM6G980248 crr5 from: AY104728 Chr3 148,064,771 148,065,302 GRMZM2G096171 crr7 Chr4 118,088,455 118,091,073 GRMZM2G099797 crr8 Chr1 28,417,831 28,422,778 GRMZM2G078412 crs1 Classical Gene Chr1 221,032,166 221,044,222 GRMZM2G078412 crs1 from alignment of cDNA AF290414 |gi|9837549 to B73_V2 (Jul 2011) Chr1 221,032,166 221,044,222 GRMZM2G132021 crs2 Classical Gene Chr8 12,557,722 12,566,051 GRMZM2G132021 crs2 from alignment of B73_v2 to cDNA AF225708 |gi| 6752918. Chr8 12,557,722 12,566,051 GRMZM2G053196 crs3 Chr9 10,846,021 10,852,948 GRMZM2G481231 crs4 Chr2 160,534,929 160,541,718 GRMZM2G358059 crt2 Classical Gene Chr7 24,423,090 24,427,016 GRMZM2G108457 crti1 From homology to sequence published by Vallabhaneni and Wurtzel, 2009. Chr4 201,046,911 201,051,551 GRMZM2G106531 crti2 From homology to sequence published by Vallabhaneni and Wurtzel, 2009. Chr2 227,035,811 227,040,800 GRMZM2G144273 crti3 Owens et al., 2014 Chr5 1,333,687 1,341,860 GRMZM2G017805 crup1 aligns to sequence for fl cDNA ZMBFC0139E12 described in suppl data of Bradbury et al 2012 Chr5 35,290,697 35,295,045 GRMZM2G049549 cry2 from: BT036578 Chr2 44,186,481 44,190,062 GRMZM2G356459 csd1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 39,400,907 39,403,446 GRMZM2G389768 csd2 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 238,665,158 238,666,872 GRMZM2G141150 csd3 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 72,594,595 72,596,618 GRMZM5G895313 csd4 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 143,487,131 143,488,239 Zm00001d042044 csr1 v4 Chr3 148,445,216 148,448,764 GRMZM2G009465 csu1138 Chr1 120,200,389 120,202,682 GRMZM2G026807 csu1171 Chr1 14,623,612 14,638,761 GRMZM2G037485 csu147 Chr9 101,747,048 101,748,531 GRMZM2G030606 csu173 Chr5 181,437,480 181,439,392 GRMZM2G162292 csu3 Chr1 82,584,684 82,587,334 GRMZM2G154508 csu31a Chr8 146,425,699 146,426,962 GRMZM2G093405 csu32a Chr3 3,885,932 3,888,723 GRMZM2G164440 csu337 Chr2 156,962,054 156,963,314 GRMZM2G096247 csu454(gst) Chr1 7,858,766 7,859,978 GRMZM2G006429 csu634 Chr9 136,805,443 136,808,919 GRMZM2G021331 csu849(atpb) from p-csu849 (W21766) Chr8 65,484,575 65,488,309 GRMZM2G089491 csu923(sec61) Chr6 95,634,080 95,636,134 GRMZM2G147390 csu948 from: EU966448 Chr10 113,729,637 113,731,267 GRMZM5G809546 csy1 Classical Gene Chr10 52,428,891 52,457,207 GRMZM2G064732 ct2 Bommert, et al. 2013 Chr1 16,348,267 16,356,203 GRMZM2G051943 cta1 Classical Gene Chr2 34,162,588 34,163,936 GRMZM2G005633 ctb1 from: M84165 Chr10 127,392,328 127,393,918 GRMZM2G048846 ctn1 Chr7 165,886,707 165,889,308 GRMZM2G063851 cts1 from: W49861 Chr5 123,666,786 123,673,425 GRMZM2G166089 cul1 Chr8 126,398,499 126,406,791 GRMZM2G463640 cyb6 Zaidi et al., 2015 Chr5 21,522,922 21,524,744 GRMZM2G034647 cyc1 Classical Gene Chr8 119,587,820 119,590,668 GRMZM2G107377 cyc10 Garza-Aguilar et al., 2016 Chr7 49,750,260 49,752,394 GRMZM2G161382 cyc11 Garza-Aguilar et al., 2016 Chr2 163,951,423 163,953,820 GRMZM2G408242 cyc12 Chr7 137,132,640 137,137,679 GRMZM2G075117 cyc13 Chr4 179,655,519 179,658,130 GRMZM2G073671 cyc3 Classical Gene Chr6 82,783,470 82,787,296 GRMZM2G310115 cyc4 from: Entrez Gene 100274285 Chr8 170,942,614 170,961,820 GRMZM2G005619 cyc5 from: BT055761 Chr8 1,514,389 1,517,712 Zm00001d009011 cyc6 V4 Chr8 30,110,204 30,114,064 GRMZM2G310115 cyc7 Classical Gene Chr8 170,942,614 170,961,820 GRMZM2G138886 cyc8 from: Sabelli et al., 2014 Chr2 18,100,584 18,104,322 GRMZM2G017081 cyc9 Jia et al., 2016 Chr5 59,835,715 59,840,942 GRMZM5G899349 cyp1 Classical Gene Chr3 232,159,860 232,163,704 GRMZM2G370745 cyp10 From match to Genbank sequences. Chr3 217,067,316 217,070,532 GRMZM2G129860 cyp11 From homology to Genbank sequence. Chr3 217,218,199 217,221,692 GRMZM2G091588 cyp12 Match to sequence published in Persans et al. Chr2 184,817,709 184,821,832 GRMZM5G837869 cyp13 From homology to Genbank sequence. Chr5 215,877,677 215,882,183 GRMZM2G143202 cyp14 From homology to Genbank sequence. Chr1 86,848,122 86,858,514 GRMZM2G010221 cyp15 From homology to primer sequences from Farre et al. 2013. Chr4 236,268,174 236,272,709 Zm00001d002937 cyp16 v4 Chr2 27,420,578 27,426,388 GRMZM2G138008 cyp17 Suzuki et al., 2015 Chr7 164,026,278 164,028,417 GRMZM2G470442 cyp18 Suzuki et al., 2015 Chr1 73,382,596 73,385,374 GRMZM2G102079 cyp19 from: ACG28049 Chr7 6,540,482 6,542,475 GRMZM2G139467 cyp20 Richter et al., 2016 Chr2 234,927,959 234,929,946 GRMZM2G054603 cyp21 NCBI: not predicted in v4 Chr9 156,449,824 156,452,070 Zm00001d019415 cyp6 v4 Chr7 32,852,022 32,852,396 GRMZM2G167986 cyp8 Classical Gene Chr1 243,707,108 243,709,449 GRMZM2G138248 cyp9 Irmisch et al., 2015 Chr9 79,214,248 79,216,270 GRMZM2G082185 cys1 from: EU969699 Chr8 6,465,005 6,468,479 GRMZM2G005887 cys2 from: Entrez Gene 542438 Chr1 177,054,678 177,059,679 GRMZM2G168474 czog1 from sequence AF318075 Chr2 19,085,185 19,087,692 GRMZM2G110511 czog2 Chr8 166,957,556 166,959,303 GRMZM2G036340 d1 Teng et al., 2013; from: JX307637 (Chen et al., 2014) Chr3 10,455,337 10,457,618 GRMZM2G093195 d3 aligment to cDNA gi accession 542580 Chr9 26,725,936 26,729,883 GRMZM2G093195 d3 Classical Gene Chr9 26,725,936 26,729,883 GRMZM2G144744 d8 Classical Gene Chr1 266,160,101 266,163,168 GRMZM2G144744 d8 Chr1 266,160,101 266,163,168 GRMZM2G024973 d9 Classical Gene Chr5 11,793,473 11,795,945 GRMZM2G024973 d9 Chr5 11,793,473 11,795,945 GRMZM2G084881 dar1 Chr2 166,248,729 166,253,814 GRMZM2G070360 dba2 from: EU959295 Chr3 212,237,694 212,247,053 GRMZM2G011513 dba3 Chr10 147,971,633 147,973,013 GRMZM2G018876 dbb1 Chr2 34,309,164 34,353,587 GRMZM2G143718 dbb10 Li et al., 2017 Chr7 142,719,045 142,722,858 GRMZM2G028594 dbb11 Li et al., 2017 Chr9 19,034,863 19,041,148 GRMZM2G098442 dbb12 Li et al., 2017 Chr10 133,526,489 133,528,033 GRMZM2G131982 dbb2 Li et al., 2017 Chr2 22,527,448 22,530,936 GRMZM5G834596 dbb3 Li et al., 2017 Chr3 5,041,526 5,161,029 GRMZM2G019335 dbb4 Li et al., 2017 Chr4 134,046,087 134,047,565 GRMZM2G118884 dbb5 Li et al., 2017 Chr5 60,454,730 60,456,814 GRMZM2G095299 dbb6 Li et al., 2017 Chr5 182,486,593 182,488,058 GRMZM2G110541 dbb7 Li et al., 2017 Chr5 190,103,401 190,104,973 GRMZM2G070446 dbb8 Li et al., 2017 Chr6 74,621,148 74,626,420 GRMZM2G116475 dbb9 Li et al., 2017 Chr6 84,690,279 84,691,702 GRMZM2G061487 dbf1 from: EU963205 Chr1 217,638,400 217,639,968 GRMZM2G124037 dbf3 Classical Gene Chr2 195,129,909 195,130,993 GRMZM2G380377 dbp4 from alignment to FJ805752 Chr6 62,712,930 62,714,535 GRMZM2G108147 dbptf1 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 173,593,079 173,596,604 GRMZM2G180430 dbptf2 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 214,138,462 214,147,660 GRMZM2G149132 dbptf3 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 14,021,102 14,026,143 GRMZM2G158734 dbptf4 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 88,137,603 88,141,355 GRMZM2G083459 dcd1 Classical Gene Chr10 90,776,034 90,781,199 GRMZM2G040762 dcl101 from alignment to sequence EU951021 Chr1 4,600,841 4,608,248 GRMZM2G413853 dcl102 from ChromDB sequence & XM_008666626 Chr1 229,801,762 229,819,069 GRMZM2G160473 dcl103 from ChromDB sequence Chr10 129,990,456 129,992,917 GRMZM5G814985 dcl104 from ChromDB sequence Chr3 164,408,916 164,418,189 GRMZM2G301405 dcl105 from ChromDB sequence Chr5 19,916,753 19,927,967 GRMZM2G024466 dcl4 Petsch et al., 2015 Chr10 130,059,161 130,061,644 GRMZM2G050869 dcl4 Petsch et al., 2015 Chr10 130,072,344 130,073,641 GRMZM2G050882 dcl4 Petsch et al., 2015 Chr10 130,081,664 130,095,543 GRMZM2G160473 dcl4 Petsch et al., 2015 Chr10 129,990,456 129,992,917 GRMZM2G040933 dct1 from B73_v2 alignment to cDNA AB112937 Chr2 188,701,434 188,706,443 GRMZM2G086258 dct2 from B73_V2 alignment to cDNA AB112938 Chr1 181,895,436 181,907,817 GRMZM2G403562 ddt1 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 145,263,420 145,271,766 GRMZM2G064145 ddt2 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 117,286,975 117,292,108 GRMZM2G337749 ddt3 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 173,435,057 173,440,344 GRMZM2G128176 ddt4 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 171,605,886 171,616,500 AC196465.3_FG006 ddt5 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 149,438,422 149,444,943 GRMZM2G314661 ddt6 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 4,874,772 4,883,107 GRMZM2G091819 de18 from alignment of sequence DQ995287 and Bernardi, J et al. 2012. Chr10 16,522,572 16,525,775 AF546188.1_FG007 de30 Based on homology to Genbank Acc No. AY434688 (Kim et al. 2004) Chr7 18,877,460 18,878,182 GRMZM2G368890 def1 Liu et al., 2016 Chr10 63,633,347 63,634,218 GRMZM2G368861 def2 Liu et al., 2016 Chr10 63,631,377 63,634,230 GRMZM2G321753 dek1 Classical Gene Chr1 47,296,057 47,325,628 GRMZM2G087226 dek10 Qi et al., 2017 Chr4 236,755,443 236,770,419 GRMZM2G110851 dek2 Qi et al., 2016 Chr1 299,174,521 299,176,527 GRMZM2G066749 dek35 Chen et al., 2016 Chr1 267,973,485 267,976,040 GRMZM5G892151 dek36 Wang et al., 2017 Chr5 5,205,807 5,208,368 GRMZM2G048851 dek38 Chr5 53,023,389 53,032,516 GRMZM2G117388 der1 Chr8 108,530,756 108,538,547 GRMZM2G082976 der2 from: AY854015 Chr5 924,282 928,929 GRMZM2G143817 der3 from: AY854014 Chr6 130,081,997 130,086,777 GRMZM2G112609 der4 from: AY854016 Chr1 298,904,989 298,911,945 GRMZM2G004683 dfr1 from EU968270 Chr7 134,116,825 134,118,763 GRMZM5G855672 dhar1 sequence similarity to wheat DHAR cDNA AY074784 Chr8 132,704,679 132,707,776 GRMZM2G035502 dhar3 from alignment to wheat cDNA sequence AY074784 Chr6 34,430,158 34,433,252 GRMZM2G079440 dhn1 Classical Gene Chr6 137,332,062 137,333,893 GRMZM2G169372 dhn13 Chr1 259,363,954 259,365,311 GRMZM2G373522 dhn3 from: EU944673 Chr4 154,337,342 154,339,063 GRMZM2G031308 dhn6 Chr3 200,237,243 200,241,761 GRMZM2G002786 dhn7 Chr8 174,954,713 174,956,656 GRMZM2G076946 dhr2 Chr3 136,590,830 136,594,609 GRMZM2G015132 dla1 Chr5 155,570,391 155,577,785 GRMZM2G080116 dlc1 from Cell Genomics project (Oct 2013) Chr8 61,613,853 61,615,071 GRMZM2G067921 dlf1 Classical Gene Chr7 175,583,965 175,585,451 GRMZM2G088309 dlo1 yab2 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 26,576,546 26,581,707 GRMZM2G102218 dlo2 yab7 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 146,951,299 146,956,590 GRMZM2G171317 dmag1 Chr6 96,096,133 96,100,449 GRMZM2G113228 dmag2a Chr10 5,735,648 5,739,240 GRMZM2G114592 dmag2b Chr6 166,365,839 166,367,252 GRMZM2G109618 dmc1 from: NP 001141379 (Sidhu et al., 2017) Chr3 229,761,643 229,766,558 GRMZM5G856881 dmes1 Owens, BF et al. 2014 Chr3 170,159,124 170,162,114 GRMZM2G172032 dmes2 Owens, BF et al. 2014 Chr8 164,298,387 164,301,819 GRMZM2G152757 dnp1 Chr10 15,721,331 15,725,740 GRMZM2G111510 dnp2 from: AF307152 Chr3 200,107,689 200,115,853 Zm00001d031278 dof1 v4 Chr1 184,859,499 184,860,221 GRMZM2G435475 dof10 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 158,675,548 158,676,679 GRMZM2G123900 dof11 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 154,329,458 154,331,722 GRMZM2G178767 dof12 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 19,549,995 19,551,017 GRMZM2G456452 dof13 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 227,596,191 227,597,088 GRMZM2G134545 dof14 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 152,100,148 152,102,643 GRMZM2G451771 dof15 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 88,301,230 88,302,056 GRMZM2G089850 dof16 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 130,393,751 130,395,017 GRMZM2G114998 dof17 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 155,035,798 155,038,140 GRMZM2G131897 dof18 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 164,644,881 164,645,955 GRMZM2G135703 dof19 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 176,010,296 176,011,726 GRMZM2G009406 dof2 Classical Gene Chr2 189,176,444 189,178,274 GRMZM2G371058 dof20 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 149,318,311 149,319,745 GRMZM2G162749 dof21 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 14,850,152 14,853,035 GRMZM2G171852 dof22 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 194,884,355 194,887,188 GRMZM2G010290 dof23 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 137,229,762 137,232,013 GRMZM2G084130 dof24 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 6,118,778 6,119,924 GRMZM2G108865 dof25 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 280,409,564 280,411,218 GRMZM2G061292 dof26 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 18,177,711 18,179,160 GRMZM2G017470 dof27 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 293,405,280 293,407,607 GRMZM2G093725 dof28 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 293,486,116 293,487,783 GRMZM2G140694 dof29 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 201,437,666 201,441,763 GRMZM2G179069 dof3 Chr6 36,946,638 36,948,605 AC233935.1_FG005 dof30 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 40,917,520 40,918,920 GRMZM2G144188 dof31 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 2,344,044 2,345,532 GRMZM2G011832 dof32 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 246,538,639 246,539,936 GRMZM2G144172 dof33 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 2,336,487 2,338,861 GRMZM2G064655 dof34 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 203,073,326 203,075,231 GRMZM2G137502 dof36 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 72,625,013 72,627,421 GRMZM2G394973 dof37 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 195,990,512 195,991,615 GRMZM2G042218 dof38 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 166,129,975 166,131,371 GRMZM2G045678 dof39 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 254,619,872 254,621,178 GRMZM2G327189 dof4 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 209,919,655 209,921,032 GRMZM2G138455 dof40 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 242,766,583 242,768,989 GRMZM2G142718 dof41 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 147,844,469 147,845,926 GRMZM2G394941 dof42 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 204,282,491 204,284,190 GRMZM2G589696 dof43 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 160,304,743 160,307,885 AC209819.3_FG009 dof44 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 122,590,335 122,590,955 GRMZM2G082490 dof45 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 173,272,809 173,273,930 GRMZM2G176063 dof46 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 126,327,930 126,330,315 AC155434.2_FG006 dof47 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 173,848,308 173,849,744 GRMZM5G880268 dof5 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 133,370,483 133,372,747 GRMZM2G089949 dof6 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 40,521,477 40,522,945 GRMZM2G378490 dof7 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 6,300,724 6,302,028 GRMZM2G463525 dof8 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 44,598,043 44,601,358 GRMZM2G449950 dof9 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 164,205,529 164,206,744 GRMZM2G435338 dpold3a Chr3 5,429,348 5,438,197 GRMZM2G005536 dpold3b Chr8 23,383,967 23,389,363 GRMZM2G044247 dpr1 Chr1 3,642,611 3,645,502 GRMZM2G027835 dps1 from alignment of EU959911 to B73_V3 Chr9 107,331,165 107,334,148 GRMZM2G362850 drh1 from: AY466159 Chr3 163,786,353 163,791,421 GRMZM2G123896 drm1 from: AY103814 Chr1 222,643,514 222,645,307 GRMZM2G117329 dsc1 B73_V3 alignment to AF006498 Chr4 47,714,348 47,736,769 GRMZM5G872204 dsc2 Takacs, E et al. 2012 Chr1 195,791,317 195,802,900 GRMZM2G059225 dsc3 Takacs, E et al. 2012 Chr7 135,541,997 135,550,832 GRMZM2G006324 dsul1 Augustine et al, 2016 Chr7 159,979,076 159,979,972 AC210848.3_FG004 dsy2 Lee et al., 2015 Chr5 89,755,508 89,760,884 GRMZM2G019121 dts1 Chr5 75,965,462 75,969,666 GRMZM2G141399 du1 Classical Gene Chr10 59,516,234 59,527,812 GRMZM2G141399 du1 from alignment to seqence JF273457 Chr10 59,516,234 59,527,812 GRMZM2G433025 duf177 Chr5 216,820,554 216,821,708 GRMZM2G114861 dv1 from: AF272754 Chr2 7,626,633 7,631,527 GRMZM2G063048 dvr1 from sequence JX239752.1 Chr1 59,865,304 59,866,740 GRMZM2G013657 dwil1 from sequence reported in Jiang et al., 2012 Chr6 143,487,859 143,494,583 GRMZM2G056975 dxr1 From sequence homology to Genbank sequence. Chr3 30,227,477 30,234,031 GRMZM2G036290 dxr2 Owens et al., 2014 Chr8 8,094,882 8,101,495 GRMZM2G137151 dxs1 From Cordoba et al., 2011. Chr6 146,570,742 146,575,010 GRMZM2G493395 dxs2 see Cordoba et al 2011 Chr7 14,086,686 14,089,909 GRMZM2G173641 dxs3 alignment of sequence HQ113384 to B73_v2 (Cordoba et al 2011) Chr9 20,471,360 20,476,373 Zm00001d045937 dzs10 v4 Chr9 47,916,398 47,916,850 GRMZM2G100018 dzs18 Classical Gene Chr6 121,573,176 121,574,010 GRMZM2G001699 e2f1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 233,461,624 233,465,523 GRMZM2G169709 e2f10 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 9,941,701 9,945,712 GRMZM2G052515 e2f11 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 6,663,939 6,668,632 GRMZM2G060000 e2f12 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 115,306,684 115,309,679 GRMZM2G361659 e2f13 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 182,904,238 182,907,831 GRMZM5G829408 e2f14 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 158,198,224 158,202,485 GRMZM2G148506 e2f15 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 142,876,623 142,885,325 GRMZM2G041701 e2f16 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 109,547,016 109,551,841 AC214168.3_FG001 e2f17 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 56,303,461 56,307,449 GRMZM2G139024 e2f18 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 32,444,644 32,482,308 GRMZM2G086072 e2f19 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 11,479,832 11,487,112 GRMZM2G333591 e2f2 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 223,993,795 223,997,480 GRMZM2G351232 e2f3 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 262,525,868 262,531,447 AC233850.1_FG005 e2f4 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 169,877,246 169,881,176 GRMZM2G050590 e2f5 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 113,226,437 113,231,629 GRMZM2G063387 e2f6 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 152,941,252 152,946,177 GRMZM2G378665 e2f7 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 205,840,277 205,843,667 GRMZM2G404769 e2f8 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 175,687,853 175,693,606 GRMZM2G462623 e2f9 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 150,408,103 150,413,617 GRMZM2G456746 ea1 Classical Gene Chr7 164,503,140 164,503,655 GRMZM2G129157 ebe1 Chr8 158,567,300 158,572,192 GRMZM2G167733 ebe2 from: Entrez Gene 542047 Chr6 109,030,239 109,033,033 GRMZM2G137582 ebf1 Chr6 102,392,990 102,395,999 GRMZM2G132903 ech1 Chr8 40,263,840 40,270,804 GRMZM2G107654 eif2 from: T18419; gene model GRMZM2G150380 on RefGen_v1 corresponds to the gene model GRMZM2G107654 on RefGen_v2. Chr7 158,175,062 158,191,500 GRMZM2G093050 eif3 from: AF073329 Chr3 7,406,093 7,414,401 GRMZM2G116034 eif4 from: AF007580 Chr5 56,805,146 56,809,251 GRMZM2G027995 eif4a from: U73459 Chr6 87,282,559 87,286,379 GRMZM2G165917 eif5 Classical Gene Chr4 238,064,651 238,068,549 GRMZM2G113696 eif5a Classical Gene Chr2 209,954,275 209,957,586 GRMZM2G002616 eif6 from: AF076954 Chr3 132,487,154 132,491,827 GRMZM2G022019 eif7 from: AF076955 Chr5 30,318,321 30,323,991 GRMZM2G317584 eil1 Chr9 133,469,222 133,473,010 AC234203.1_FG011 eil13 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 188,105,263 188,107,161 GRMZM2G003558 eil2 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 218,017,798 218,019,723 GRMZM2G033570 eil3 Chr1 52,561,894 52,565,938 GRMZM2G006752 eil4 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 133,190,586 133,195,177 AC210616.4_FG005 eil5 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 124,304,670 124,305,995 GRMZM2G151811 eil6 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 173,994,325 173,996,353 GRMZM2G044322 eil7 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 43,586,438 43,588,329 GRMZM2G040481 eil8 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 176,155,464 176,156,801 GRMZM2G068217 ein2 from: AY359584 Chr3 2,874,629 2,881,174 AC233866.1_FG006 elfa1 Classical Gene Chr6 137,601,820 137,603,647 GRMZM2G343543 elfa10 Chr6 102,923,481 102,926,877 GRMZM2G149768 elfa2 Chr6 136,755,765 136,759,415 GRMZM2G154218 elfa3 Chr6 136,703,065 136,706,224 GRMZM2G153541 elfa9 from NM_001112117.1 Chr9 88,067,950 88,071,249 GRMZM2G122871 elfg1 Classical Gene Chr6 104,230,611 104,235,309 GRMZM2G355752 elip1 from homology with Arabidopsis elip AF134132; Rodriguez et al, 2013 Chr2 234,220,402 234,221,935 GRMZM2G425728 elip2 from homology with Arabidopsis elip AF134132; Rodriguez et al, 2013 Chr7 9,706,644 9,708,137 GRMZM5G861678 elm1 Classical Gene Chr8 158,299,004 158,303,170 GRMZM2G101004 elm2 from primers in Shi et al., 2013 Chr9 89,924,624 89,933,813 GRMZM2G384293 emb14 homology to Arabidopsis NOA1; NM_180335 (per Zhang et al., 2013) and from KC460269 (Li et al., 2015) Chr4 241,018,915 241,022,802 GRMZM2G119691 emb17 from: GenBank JQ811769 Chr5 213,411,819 213,415,006 GRMZM2G136559 emb18 from Genbank AJ431193 Chr9 93,426,568 93,429,048 GRMZM5G884466 emb2 Sosso et al, 2012 Chr1 301,344,228 301,363,304 GRMZM2G095078 embp1 Chr7 19,265,565 19,270,520 GRMZM2G078416 emp10 Cai et al., 2017 Chr1 275,735,516 275,741,414 GRMZM2G060516 emp16 Xiu et al, 2016 Chr8 149,423,147 149,426,931 AC212684.3_FG012 emp17 Yang et al., 2017 Chr7 172,405,097 172,407,361 GRMZM2G039155 emp2 Classical Gene Chr2 178,295,993 178,300,823 GRMZM2G092198 emp4 Classical Gene Chr1 272,101,204 272,103,668 GRMZM2G092198 emp4 from alignment of mRNA DQ291135 Chr1 272,101,204 272,103,668 GRMZM2G060536 emp5 from GenBank JX308939 Chr3 147,043,139 147,046,048 GRMZM2G048392 emp6 Chettoor et al., 2014 Chr2 188,808,679 188,813,282 GRMZM2G041231 emp7 Sun et al., 2015 Chr8 4,335,406 4,337,599 GRMZM2G144610 endo1 Chr9 37,552,323 37,553,942 GRMZM2G113228 endo3 Chr10 5,735,648 5,739,240 GRMZM2G073079 eng1 Chr4 70,091,436 70,093,852 GRMZM2G064302 eno1 Classical Gene Chr9 22,112,240 22,116,928 GRMZM2G064302 eno1 Chr9 22,112,240 22,116,928 GRMZM2G048371 eno2 from NM_001111901 Chr1 125,081,143 125,088,083 GRMZM2G129189 epr4 Chr5 182,569,001 182,570,164 GRMZM5G877500 eps1 Chr9 22,689,315 22,692,638 GRMZM2G158024 era1 Belcher et al., 2015 Chr8 70,795,031 70,799,216 GRMZM5G889719 ereb1 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 115,615,847 115,616,692 GRMZM2G434203 ereb10 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 195,729,657 195,730,672 AC209257.4_FG006 ereb100 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 153,427,827 153,429,877 GRMZM2G003466 ereb101 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 20,094,144 20,095,477 GRMZM2G052667 ereb102 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 120,384,696 120,387,770 GRMZM2G133168 ereb103 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 4,660,995 4,665,940 GRMZM5G816314 ereb104 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 191,933,955 191,934,641 GRMZM2G042756 ereb105 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 16,543,815 16,545,074 AC198403.3_FG001 ereb106 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 10,908,008 10,908,646 GRMZM2G057386 ereb107 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 191,428,547 191,430,072 GRMZM2G480434 ereb108 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 189,829,804 189,830,412 GRMZM2G141679 ereb109 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 100,267,099 100,269,276 GRMZM2G076896 ereb111 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 215,636,055 215,638,692 GRMZM2G039870 ereb112 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 138,460,613 138,461,461 GRMZM2G457562 ereb113 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 100,502,242 100,503,899 GRMZM2G008234 ereb114 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 3,186,862 3,189,788 GRMZM2G069146 ereb115 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 141,174,421 141,175,245 GRMZM2G131281 ereb116 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 135,625,864 135,626,905 GRMZM2G113078 ereb117 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 135,582,288 135,584,343 GRMZM2G081892 ereb118 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 12,197,384 12,199,394 GRMZM2G309731 ereb119 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 195,911,073 195,911,583 GRMZM2G100982 ereb12 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 71,940,571 71,941,451 AC200038.4_FG011 ereb120 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 21,602,442 21,603,594 GRMZM2G176175 ereb121 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 22,015,365 22,026,546 GRMZM2G301860 ereb122 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 16,258,284 16,259,458 GRMZM2G461907 ereb123 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 21,635,058 21,635,844 GRMZM2G399098 ereb124 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 151,187,691 151,189,042 GRMZM2G023708 ereb125 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 112,324,342 112,325,371 GRMZM2G169654 ereb126 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 206,678,255 206,680,041 GRMZM2G000520 ereb127 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 155,637,630 155,639,087 AC233933.1_FG001 ereb128 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 34,482,445 34,483,233 GRMZM2G016434 ereb129 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 166,359,251 166,361,971 GRMZM2G011110 ereb13 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 178,417,315 178,418,683 GRMZM2G399072 ereb130 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 16,118,043 16,122,450 GRMZM2G087059 ereb131 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 64,001,713 64,004,098 GRMZM2G165257 ereb132 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 130,100,068 130,101,363 GRMZM2G100727 ereb133 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 150,487,664 150,489,012 GRMZM2G474326 ereb134 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 198,667,814 198,668,962 GRMZM2G328197 ereb135 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 77,131,623 77,132,592 GRMZM2G021369 ereb136 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 210,323,041 210,324,358 GRMZM2G028386 ereb137 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 201,993,810 201,995,393 GRMZM2G079653 ereb138 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 100,107,595 100,108,704 GRMZM2G103085 ereb139 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 209,945,135 209,946,354 GRMZM2G018398 ereb14 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 176,066,660 176,069,349 GRMZM2G348307 ereb140 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 65,968,744 65,972,918 GRMZM2G097182 ereb141 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 145,467,972 145,468,863 GRMZM2G010100 ereb142 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 255,604,709 255,605,965 GRMZM2G141219 ereb143 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 117,877,954 117,881,926 GRMZM2G005301 ereb144 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 150,664,312 150,665,813 GRMZM2G106591 ereb145 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 102,578,638 102,580,044 GRMZM2G021790 ereb146 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 69,893,597 69,894,451 GRMZM2G310368 ereb147 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 188,728,319 188,729,366 GRMZM2G053503 ereb148 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 35,566,541 35,567,721 GRMZM2G425798 ereb149 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 111,635,997 111,638,209 GRMZM2G111415 ereb15 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 173,829,508 173,830,759 GRMZM2G033656 ereb150 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 189,870,771 189,871,628 GRMZM2G379652 ereb153 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 15,671,318 15,672,307 GRMZM2G026926 ereb154 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 24,360,914 24,363,125 GRMZM2G060465 ereb155 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 185,036,196 185,037,019 GRMZM2G421033 ereb156 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 144,707,377 144,708,793 GRMZM2G087040 ereb157 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 174,205,686 174,206,245 GRMZM2G002119 ereb158 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 188,630,301 188,631,150 GRMZM2G009598 ereb159 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 292,178,941 292,180,261 GRMZM2G137341 ereb16 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 195,885,970 195,887,098 GRMZM2G171179 ereb160 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 11,535,025 11,537,985 GRMZM2G021573 ereb161 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 145,136,034 145,140,341 GRMZM2G059939 ereb162 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 162,767,827 162,769,490 GRMZM2G022359 ereb163 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 73,140,439 73,143,884 GRMZM2G093595 ereb164 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 140,882,370 140,883,690 GRMZM2G317596 ereb165 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 164,875,430 164,876,438 GRMZM2G478965 ereb166 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 15,838,022 15,839,110 GRMZM2G050851 ereb167 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 209,401,525 209,403,939 GRMZM2G039112 ereb168 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 162,442,365 162,444,201 GRMZM2G016079 ereb169 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 189,807,563 189,808,400 GRMZM2G029323 ereb17 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 181,088,255 181,090,094 GRMZM2G300924 ereb170 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 146,313,370 146,315,508 GRMZM2G013657 ereb171 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 143,487,859 143,494,583 GRMZM2G369472 ereb172 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 199,674,463 199,675,600 GRMZM2G007406 ereb173 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 141,206,088 141,207,032 GRMZM2G149756 ereb174 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 175,592,023 175,595,225 GRMZM2G429378 ereb175 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 17,655,509 17,656,456 GRMZM2G072926 ereb176 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 152,189,367 152,190,424 GRMZM2G123119 ereb177 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 52,773,401 52,774,399 GRMZM2G047999 ereb178 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 166,555,654 166,556,595 GRMZM2G129674 ereb179 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 17,461,265 17,462,932 GRMZM2G055204 ereb18 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 208,210,507 208,213,447 GRMZM2G018984 ereb180 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 17,492,641 17,494,645 AC206951.3_FG016 ereb181 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 17,518,824 17,519,639 AC206951.3_FG017 ereb182 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 17,525,572 17,526,492 GRMZM2G458437 ereb183 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 216,615,448 216,616,387 GRMZM2G028151 ereb184 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 281,700,006 281,703,981 GRMZM2G028969 ereb185 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 20,720,151 20,721,075 AC187157.4_FG001 ereb186 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 22,690,444 22,691,545 GRMZM2G130459 ereb187 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 207,437,058 207,441,313 GRMZM2G477287 ereb188 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 80,875,824 80,876,762 GRMZM2G060517 ereb189 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 53,484,637 53,485,245 GRMZM2G175543 ereb19 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 88,910,388 88,912,086 GRMZM2G104260 ereb190 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 145,554,185 145,555,089 GRMZM2G047918 ereb191 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 150,972,392 150,973,390 GRMZM2G129777 ereb192 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 22,395,049 22,397,063 GRMZM2G169382 ereb193 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 56,326,099 56,327,373 GRMZM2G120401 ereb194 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 80,500,107 80,501,402 GRMZM2G466044 ereb195 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 191,270,861 191,272,390 GRMZM2G020150 ereb196 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 156,591,969 156,593,826 GRMZM2G174784 ereb197 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 5,520,018 5,524,385 GRMZM2G055180 ereb198 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 21,347,526 21,348,862 GRMZM2G163745 ereb199 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 208,809,359 208,810,072 GRMZM2G080516 ereb2 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 139,299,146 139,301,101 GRMZM2G025062 ereb200 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 172,771,420 172,772,631 GRMZM2G384386 ereb201 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 160,094,706 160,096,131 GRMZM2G148333 ereb202 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 184,209,896 184,212,209 GRMZM2G104866 ereb203 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 98,042,537 98,044,099 GRMZM2G061487 ereb204 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 217,638,400 217,639,968 GRMZM2G438202 ereb205 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 141,249,356 141,251,027 GRMZM2G366434 ereb206 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 184,337,648 184,342,194 GRMZM2G156006 ereb207 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 13,761,895 13,762,657 GRMZM2G160971 ereb208 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 212,582,559 212,584,989 GRMZM2G089995 ereb209 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 26,450,939 26,451,894 GRMZM2G175525 ereb21 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 116,699,951 116,700,712 GRMZM2G125460 ereb210 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 214,344,857 214,345,995 GRMZM2G138396 ereb211 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 186,957,472 186,958,546 GRMZM2G076602 ereb212 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 144,777,835 144,780,346 GRMZM2G006745 ereb22 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 94,530,861 94,534,207 GRMZM2G069126 ereb23 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 141,170,323 141,171,382 GRMZM2G086573 ereb24 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 4,666,315 4,671,738 GRMZM2G119865 ereb25 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 79,717,475 79,718,928 GRMZM2G317160 ereb26 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 51,014,131 51,020,257 GRMZM2G084264 ereb27 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 110,073,119 110,074,320 GRMZM2G544539 ereb28 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 9,217,173 9,219,426 GRMZM2G132223 ereb29 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 171,190,647 171,191,502 GRMZM5G842961 ereb30 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 191,829,610 191,830,443 GRMZM5G852704 ereb31 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 5,877,307 5,878,356 GRMZM2G139740 ereb32 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 119,105,133 119,105,723 GRMZM2G073982 ereb33 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 20,121,733 20,123,748 GRMZM5G846057 ereb34 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 165,687,986 165,689,517 GRMZM2G415251 ereb35 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 21,678,126 21,679,947 GRMZM2G069082 ereb36 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 141,162,777 141,163,747 GRMZM2G322672 ereb37 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 81,797,663 81,800,162 GRMZM2G419901 ereb38 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 15,773,208 15,774,173 GRMZM2G073047 ereb39 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 76,481,085 76,482,299 GRMZM2G015281 ereb4 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 37,721,439 37,722,170 GRMZM2G164591 ereb40 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 146,788,916 146,790,031 GRMZM2G146688 ereb41 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 237,250,179 237,253,121 GRMZM2G020016 ereb42 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 156,579,550 156,581,365 GRMZM2G399598 ereb43 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 219,318,493 219,323,840 GRMZM5G806839 ereb44 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 90,116,618 90,117,418 GRMZM2G067463 ereb45 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 4,352,876 4,353,499 GRMZM2G085678 ereb46 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 114,131,334 114,133,006 GRMZM2G174917 ereb47 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 5,568,515 5,570,186 GRMZM2G376255 ereb48 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 151,134,794 151,135,999 GRMZM2G159592 ereb49 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 64,222,278 64,223,655 GRMZM2G048621 ereb5 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 152,103,666 152,104,731 GRMZM2G142179 ereb50 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 2,629,088 2,630,607 GRMZM2G055070 ereb51 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 71,678,821 71,679,414 GRMZM2G105266 ereb52 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 170,265,321 170,267,160 GRMZM2G141638 ereb53 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 166,836,222 166,840,043 GRMZM2G020054 ereb54 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 65,437,299 65,438,594 GRMZM2G097081 ereb57 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 176,557,756 176,558,869 GRMZM2G381441 ereb58 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 300,119,372 300,120,555 GRMZM5G837876 ereb59 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 13,240,123 13,240,995 GRMZM2G172936 ereb6 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 20,632,553 20,633,410 GRMZM2G131266 ereb60 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 211,370,663 211,373,082 GRMZM2G475678 ereb61 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 21,187,724 21,188,794 GRMZM2G011236 ereb62 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 207,364,254 207,365,473 GRMZM2G307152 ereb63 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 170,466,981 170,467,714 GRMZM2G171569 ereb64 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 21,160,811 21,162,260 GRMZM2G124011 ereb65 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 195,135,264 195,136,246 GRMZM2G041839 ereb66 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 191,904,539 191,906,156 GRMZM2G114820 ereb67 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 125,166,271 125,168,025 GRMZM2G368838 ereb68 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 16,555,808 16,557,224 GRMZM2G085964 ereb69 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 138,751,831 138,753,113 GRMZM2G173771 ereb7 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 178,620,836 178,621,888 AC213666.3_FG003 ereb70 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 24,212,770 24,213,261 GRMZM2G113060 ereb71 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 149,648,095 149,649,451 GRMZM2G135452 ereb72 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 51,805,587 51,806,576 GRMZM2G060876 ereb73 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 165,849,278 165,850,111 GRMZM2G024871 ereb74 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 31,877,779 31,878,301 GRMZM2G060249 ereb75 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 165,822,785 165,823,252 GRMZM2G139765 ereb76 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 188,716,605 188,718,676 GRMZM2G451031 ereb77 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 186,781,331 186,784,258 GRMZM2G060206 ereb78 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 49,346,413 49,347,038 GRMZM2G175856 ereb79 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 197,306,494 197,307,177 GRMZM2G146028 ereb8 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 234,986,414 234,987,698 GRMZM2G151542 ereb80 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 147,672,456 147,674,477 GRMZM2G416701 ereb81 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 29,008,639 29,012,194 GRMZM2G019443 ereb82 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 17,154,984 17,156,006 GRMZM2G132185 ereb83 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 171,200,009 171,201,130 GRMZM2G481668 ereb84 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 147,998,722 147,999,285 GRMZM2G040664 ereb86 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 132,343,963 132,345,739 GRMZM5G805505 ereb87 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 21,231,379 21,232,602 GRMZM2G018138 ereb88 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 141,464,460 141,465,197 GRMZM2G156737 ereb89 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 48,661,492 48,662,964 GRMZM2G323172 ereb9 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 124,705,032 124,709,397 GRMZM2G110333 ereb90 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 212,398,699 212,401,458 GRMZM2G079825 ereb91 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 63,265,056 63,266,421 GRMZM2G174347 ereb92 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 120,487,038 120,488,230 GRMZM2G066158 ereb93 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 120,401,709 120,402,944 GRMZM2G363052 ereb94 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 85,662,465 85,665,508 AC198979.4_FG009 ereb95 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 10,988,032 10,988,424 GRMZM2G044077 ereb96 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 26,886,791 26,888,388 GRMZM2G068967 ereb97 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 10,793,567 10,794,323 GRMZM2G052720 ereb98 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 237,684,792 237,686,205 GRMZM2G073258 ereb99 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 134,961,620 134,962,623 GRMZM2G102601 ers14 Chr5 12,230,588 12,235,844 GRMZM2G073668 ers25 Chr1 264,657,422 264,662,580 GRMZM2G012012 es1 from alignment with cDNA AF180131 GI:12830540 (MS Ap3 2011) Chr9 126,975,034 126,975,819 GRMZM2G009359 es2 based on cDNA AF180132 GI:12830542 Chr9 126,170,000 126,170,583 GRMZM2G128301 es2 based on cDNA AF180132 GI:12830542 Chr9 126,256,594 126,257,200 GRMZM2G009359 es3 alignment of cDNA AF180132 GI:12830542 Chr9 126,170,000 126,170,583 GRMZM2G128301 es3 alignment of cDNA AF180132 GI:12830542 Chr9 126,256,594 126,257,200 GRMZM2G009359 es4 from alignment of A188 cDNA AF180134.1 GI:12830546 Chr9 126,170,000 126,170,583 AC233879.1_FG002 esp1 from: X55388 Chr6 140,536,934 140,537,348 GRMZM2G162659 esp5 Chr6 140,501,700 140,502,699 GRMZM2G046086 esr1 Chr1 14,286,859 14,287,441 GRMZM2G315601 esr2 Chr1 14,256,833 14,257,545 GRMZM2G140302 esr3 from: X99970 Chr1 14,300,150 14,300,705 GRMZM2G048353 esr6 Chr4 210,979,213 210,979,886 GRMZM2G157574 et1 Classical Gene Chr3 223,825,954 223,827,718 GRMZM2G420801 etr2 Chr10 101,173,508 101,177,424 GRMZM2G089010 etr40 Chr2 104,591,127 104,595,720 GRMZM2G147687 exg1 from: Entrez Gene 100191390 Chr1 276,371,915 276,377,603 GRMZM2G339122 expa1 Classical Gene Chr3 184,419,336 184,421,693 GRMZM2G105844 expa2 Chr5 206,888,609 206,890,560 GRMZM2G074585 expa3 Chr10 99,487,994 99,489,313 GRMZM2G368886 expa4 Chr1 293,705,165 293,708,788 GRMZM2G361064 expa5 Chr6 154,325,086 154,327,260 GRMZM2G095968 expa6 Chr1 7,353,116 7,355,434 GRMZM2G146551 expb1 from: AY197353 Chr9 118,273,115 118,274,521 GRMZM2G089699 expb10a Chr9 152,409,062 152,410,472 GRMZM2G007685 expb10c from: AY104999 (chr 3 hit) Chr3 53,557,663 53,558,609 GRMZM2G164785 expb10d from: DQ525684 Chr3 53,392,404 53,393,425 GRMZM2G127106 expb11 from: EU961014 Chr5 200,274,645 200,279,681 GRMZM2G021621 expb2 Chr1 91,256,138 91,259,053 GRMZM2G474194 expb3 Chr1 1,662,969 1,664,360 GRMZM2G154178 expb4 Chr7 41,067,901 41,069,524 GRMZM2G013671 expb5 Chr9 116,292,644 116,294,506 GRMZM2G176595 expb6 Chr1 91,884,842 91,886,219 GRMZM2G342246 expb7 from Cell Genomics Project (Oct 2013) Chr1 91,511,981 91,513,768 GRMZM2G013002 expb8 from: AF332181 Chr9 116,265,519 116,268,415 GRMZM2G099696 fab1 from: BT040366 Chr10 108,139,878 108,147,684 GRMZM2G128971 fad7 from: D63952 Chr9 138,099,701 138,102,875 GRMZM2G074401 fad8 from: D63953 Chr1 44,805,347 44,808,260 GRMZM2G022558 fae2 from: AJ292770 Chr9 87,869,349 87,871,737 GRMZM2G001663 farl1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 35,738,669 35,743,639 GRMZM2G406651 farl10 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 150,316,196 150,320,346 GRMZM2G048987 farl11 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 152,856,122 152,861,721 GRMZM2G129311 farl12 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 157,771,968 157,777,346 GRMZM2G114461 farl13 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 165,506,191 165,510,340 GRMZM2G148940 farl14 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 87,667,166 87,669,926 GRMZM2G104268 farl15 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 145,543,618 145,550,014 GRMZM2G463730 farl2 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 283,389,452 283,396,343 GRMZM2G155980 farl3 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 297,376,151 297,380,168 GRMZM2G083374 farl4 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 9,771,491 9,806,346 GRMZM2G034868 farl5 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 142,975,242 142,986,336 GRMZM2G302323 farl6 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 30,795,954 30,799,228 GRMZM2G043250 farl7 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 171,564,949 171,567,349 GRMZM2G117108 farl8 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 182,810,298 182,816,922 GRMZM2G106653 farl9 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 182,948,968 182,952,939 GRMZM2G406603 fat1 Chr9 88,263,061 88,268,115 GRMZM5G829544 fat2 from Li et al 2011 Chr9 20,595,102 20,599,326 GRMZM2G003318 fbn1 Chr1 101,275,701 101,279,519 GRMZM2G165836 fcp1 Je et al. 2016 Chr2 39,188,755 39,190,131 GRMZM2G133213 fcr1 Chr3 186,291,885 186,295,766 GRMZM2G157263 fcr2 Chr6 155,408,534 155,412,926 GRMZM5G847530 fdad1 from BT041642 Chr9 26,606,314 26,608,509 GRMZM5G824600 fdh1 Chr5 215,541,812 215,545,867 GRMZM2G423972 fdh2 Chr1 264,221,357 264,225,484 GRMZM2G056407 fdl1 La Rocca et al., 2015 Chr7 167,647,343 167,649,332 GRMZM2G122337 fdx1 Chr6 1,340,417 1,341,388 GRMZM2G048313 fdx2 Chr6 1,373,405 1,374,333 GRMZM2G053458 fdx3 Classical Gene Chr1 296,097,227 296,102,118 GRMZM2G122327 fdx5 Chr6 1,343,906 1,345,155 GRMZM2G104925 fea2 Classical Gene Chr4 133,689,783 133,692,271 GRMZM2G104925 fea2 Chr4 133,689,783 133,692,271 GRMZM2G166524 fea3 Je et al., 2016 Chr3 29,095,292 29,098,726 GRMZM2G133331 fea4 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 116,934,690 116,937,455 GRMZM2G325575 fer1 Classical Gene Chr4 183,760,831 183,763,850 GRMZM2G147266 fer2 Classical Gene Chr10 1,279,030 1,283,646 GRMZM5G869779 fgp2 Li, et al. 2014 Chr1 226,063,076 226,070,426 GRMZM2G036609 fgs1 Classical Gene Chr7 171,002,271 171,021,085 GRMZM2G129243 fha1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 5,741,207 5,746,550 AC211652.4_FG002 fha10 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 20,429,258 20,434,163 GRMZM2G701297 fha11 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 3,944,081 3,952,303 GRMZM2G105822 fha12 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 8,623,516 8,626,712 GRMZM2G081221 fha13 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 19,207,810 19,212,507 GRMZM2G006246 fha14 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 26,333,085 26,337,585 GRMZM2G113156 fha15 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 140,068,111 140,076,698 GRMZM2G172021 fha17 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 153,782,357 153,788,188 GRMZM2G136344 fha18 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 120,802,689 120,805,284 GRMZM2G424241 fha2 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 193,349,658 193,355,990 GRMZM2G086138 fha3 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 248,377,825 248,386,493 GRMZM2G359217 fha4 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 272,641,851 272,643,707 GRMZM2G127139 fha5 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 45,068,944 45,077,882 GRMZM2G133716 fha6 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 136,740,049 136,745,997 GRMZM2G150608 fha7 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 161,415,278 161,423,070 GRMZM2G391164 fha8 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 230,519,202 230,523,747 GRMZM2G177895 fha9 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 230,599,139 230,600,906 GRMZM2G062396 fht1 Classical Gene Chr2 3,561,475 3,563,418 GRMZM2G118205 fie1 Classical Gene Chr4 35,790,694 35,796,700 GRMZM2G148924 fie2 Classical Gene Chr10 84,106,322 84,110,776 GRMZM2G010937 fim1 from Cell Genomics Project Chr4 163,873,554 163,879,688 GRMZM2G094532 fl1 alignment of EF536720 to B73_v2 assembly Chr2 41,853,494 41,855,092 GRMZM2G397687 fl2 alignment of cDNA AF371274.1 to B73_V2 Chr4 21,334,901 21,335,970 GRMZM2G397687 fl2 Classical Gene Chr4 21,334,901 21,335,970 GRMZM2G353272 fl4 From: Wang et al., 2014 (one member of tandem repeated 19kD alpha zein z1A-1 gene cluster) Chr4 5,539,880 5,541,152 GRMZM2G152801 fls1 Falcone-Ferreyra et al., 2012 Chr5 210,204,906 210,206,387 GRMZM2G069298 fls2 Falcone-Ferreyra et al., 2012 Chr5 210,154,373 210,155,706 GRMZM2G058760 fnr1 Chr1 285,208,091 285,211,692 GRMZM2G058760 fnr2 Chr1 285,208,091 285,211,692 GRMZM2G167336 fns1 Rius et al., 2016 Chr9 128,676,962 128,678,835 GRMZM2G099467 fnsi1 Falcone Ferreyra et al., 2015 Chr1 83,410,152 83,414,307 GRMZM2G475380 fnsi2 Falcone Ferreyra et al., 2015 Chr1 4,760,983 4,765,716 GRMZM2G148441 fnsii1 Morohashi et al., 2012 Chr10 96,108,546 96,110,569 GRMZM2G108767 fpox1 Chr7 165,719,833 165,723,658 GRMZM2G168681 fps1 Classical Gene Chr8 62,786,955 62,791,232 GRMZM2G168681 fps1 Chr8 62,786,955 62,791,232 GRMZM2G147721 fps2 from Richter et al 2015 Chr8 153,104,841 153,108,971 GRMZM2G098569 fps3 from Richter et al 2015 Chr3 205,218,174 205,222,694 GRMZM2G086845 frk1 Chr3 168,566,367 168,569,728 GRMZM2G068557 fro2 Chr2 46,785,444 46,790,374 GRMZM2G001904 ftcl1 Guan et al., 2014 Chr10 9,142,799 9,147,733 GRMZM2G122793 ftr1 Chr9 9,969,973 9,974,729 GRMZM2G062210 fus6 Chr1 3,548,036 3,558,270 GRMZM2G087804 g2 Classical Gene Chr3 1,464,299 1,469,099 GRMZM2G087804 g2 Chr3 1,464,299 1,469,099 GRMZM2G167673 ga16,17ox1 Nelissen, et al. (2012) Chr6 155,034,889 155,036,270 AC203966.5_FG005 ga20ox1 from: NM_001112453 Chr1 299,607,382 299,608,497 GRMZM2G021051 ga20ox2 from: NM_001143386 Chr2 234,425,722 234,427,421 GRMZM2G368411 ga20ox3 Nelissen, et al. (2012) Chr3 170,942,901 170,945,698 GRMZM2G060940 ga20ox4 from: NM_001156071 Chr5 18,192,142 18,193,721 GRMZM2G049418 ga20ox5 Nelissen, et al. (2012) Chr8 164,487,836 164,490,694 GRMZM2G078798 ga2ox1 from Bolduc et al 2012 Chr6 126,063,717 126,069,395 GRMZM2G031724 ga2ox10 Nelissen, et al. (2012) Chr8 173,402,117 173,404,386 GRMZM2G127757 ga2ox11 Nelissen, et al. (2012) Chr6 158,703,759 158,705,083 GRMZM2G177104 ga2ox12 Nelissen, et al. (2012) Chr7 725,316 726,416 GRMZM2G031432 ga2ox13 Nelissen, et al. (2012) Chr3 3,994,138 3,996,082 GRMZM2G006964 ga2ox2 from: NM_001154780 Chr2 28,389,255 28,392,075 GRMZM2G022679 ga2ox3 from: FL100324 Chr3 196,126,846 196,128,900 GRMZM2G153359 ga2ox4 from: EC858802 Chr5 187,018,204 187,022,091 GRMZM2G176963 ga2ox5 Nelissen, et al. (2012) Chr3 60,943,471 60,951,573 GRMZM2G051619 ga2ox6 Chr6 131,338,805 131,342,645 GRMZM2G427618 ga2ox7 from: NM_001154796 Chr6 158,703,023 158,704,867 GRMZM2G155686 ga2ox8 from: NM_001137734 Chr6 164,507,675 164,509,560 GRMZM2G152354 ga2ox9 from: NM_001157265 Chr8 23,992,337 23,994,920 GRMZM2G044358 ga3ox1 from: JX307639 Chr6 128,498,080 128,499,807 GRMZM2G073725 gap1 from: U89897 Chr1 248,922,560 248,925,400 GRMZM2G061695 gar1 Chr3 219,494,801 219,498,659 GRMZM2G429000 gar2 from EU952874 Chr10 138,833,997 138,835,213 GRMZM2G142705 gar3 from: AB018589 Chr8 138,985,268 138,986,891 GRMZM2G025002 gata1 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 149,357,261 149,359,087 GRMZM2G532534 gata10 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 152,533,064 152,538,147 GRMZM2G404973 gata11 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 22,692,870 22,695,229 AC194965.4_FG004 gata12 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 127,629,032 127,630,234 GRMZM2G044576 gata13 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 174,313,923 174,315,776 GRMZM5G879778 gata14 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 239,234,358 239,235,044 GRMZM2G031983 gata15 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 155,457,609 155,459,172 GRMZM2G113098 gata16 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 90,962,372 90,964,067 GRMZM2G138967 gata17 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 155,999,788 156,001,252 GRMZM2G114775 gata18 Chr1 295,848,928 295,850,422 GRMZM2G421212 gata19 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 134,118,624 134,123,159 GRMZM2G104390 gata2 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 40,841,370 40,843,380 GRMZM5G887975 gata21 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 71,168,700 71,169,448 AC184831.3_FG005 gata22 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 239,028,639 239,029,484 GRMZM2G110295 gata23 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 286,470,199 286,472,456 GRMZM2G163200 gata24 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 214,574,879 214,580,853 AC202864.3_FG002 gata25 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 160,741,348 160,742,841 GRMZM2G397616 gata26 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 73,412,731 73,413,812 GRMZM2G052616 gata27 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 64,821,137 64,823,713 GRMZM2G101058 gata28 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 115,980,192 115,982,001 GRMZM2G039586 gata29 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 81,178,852 81,181,039 GRMZM2G140669 gata3 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 190,024,321 190,026,323 GRMZM2G464037 gata30 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 186,548,299 186,549,717 GRMZM2G067171 gata31 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 141,471,190 141,473,058 GRMZM2G135381 gata32 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 123,887,193 123,889,333 GRMZM2G048850 gata33 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 9,477,435 9,478,816 GRMZM2G396451 gata34 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 274,561,455 274,577,750 GRMZM2G123909 gata35 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 211,762,877 211,763,862 AC184831.3_FG008 gata36 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 239,100,691 239,101,536 GRMZM2G379005 gata4 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 172,789,633 172,794,795 GRMZM2G077002 gata5 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 22,022,637 22,026,411 GRMZM2G054615 gata6 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 133,391,911 133,394,043 GRMZM2G118214 gata7 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 9,409,405 9,411,344 GRMZM2G324131 gata8 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 9,535,048 9,537,066 GRMZM2G009530 gata9 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 177,060,036 177,061,909 GRMZM2G011932 gbf1 assigned by the Grassius project, (Yilmaz et al 2009) to bzip18 Chr6 165,543,429 165,548,373 GRMZM2G131939 gbp1 Chr1 300,951,400 300,963,846 GRMZM2G045314 gbp2 Chr1 258,058,680 258,065,662 GRMZM2G392516 gbptf1 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 19,962,225 19,966,288 GRMZM2G008558 gbptf10 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 109,773,723 109,788,339 GRMZM2G006871 gbptf11 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 94,066,876 94,068,249 GRMZM2G082318 gbptf12 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 168,446,968 168,448,568 GRMZM2G155252 gbptf13 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 21,463,521 21,465,358 GRMZM2G125239 gbptf14 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 221,138,448 221,144,193 GRMZM2G036966 gbptf15 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 18,918,022 18,924,439 GRMZM2G174240 gbptf16 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 210,638,738 210,640,244 GRMZM2G083886 gbptf17 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 210,800,522 210,802,083 GRMZM2G026417 gbptf18 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 64,021,150 64,022,771 GRMZM5G868875 gbptf19 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 5,211,419 5,213,711 GRMZM2G065506 gbptf2 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 131,400,636 131,401,747 GRMZM2G423292 gbptf20 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 55,782,767 55,784,875 EF517601.1_FG010 gbptf21 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 34,497,929 34,499,128 GRMZM2G041818 gbptf3 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 267,056,816 267,058,352 GRMZM2G066373 gbptf4 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 8,465,318 8,474,373 GRMZM2G162405 gbptf5 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 11,602,126 11,603,804 GRMZM2G075122 gbptf6 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 213,839,868 213,841,452 GRMZM2G092409 gbptf7 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 124,438,515 124,440,381 GRMZM2G134866 gbptf8 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 186,232,100 186,234,162 GRMZM2G030458 gbptf9 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 127,611,740 127,613,300 GRMZM2G008263 gbss1b from: EF471312 Chr7 34,885,173 34,892,432 GRMZM2G412911 gcs1 Chr2 221,734,091 221,744,424 GRMZM2G399183 gcsh1 Chr10 15,804,790 15,806,176 GRMZM2G104310 gdcp1 Chr10 5,874,253 5,880,613 GRMZM2G178415 gdh1 Classical Gene Chr1 287,360,596 287,367,735 GRMZM2G427097 gdh2 Chr10 134,077,909 134,082,362 GRMZM2G065585 geb1 Christensen et al., 2015 Chr3 152,010,337 152,011,716 GRMZM2G046101 geb7 Chr1 258,105,155 258,107,917 GRMZM2G005849 gfa1 from: BT036425 Chr3 230,088,470 230,094,105 GRMZM2G105644 ggh1 Owens et al., 2014 Chr5 206,940,311 206,942,851 GRMZM2G419111 ggh2 Owens et al., 2014 Chr3 40,062,815 40,065,077 AC194970.5_FG001 ggps1 From homology to Genbank sequence Chr2 207,900,564 207,901,904 GRMZM2G102550 ggps2 From homology to Genbank sequence Chr7 160,571,102 160,573,151 GRMZM2G058404 ggps3 From homology to Genbank sequence Chr8 6,359,238 6,360,557 GRMZM2G005909 ggps4 From homology to Genbank sequence Chr5 193,709,210 193,710,641 GRMZM2G107101 gi1 Frank Harmon, pers comm Chr8 21,104,080 21,112,365 GRMZM5G844173 gi2 Frank Harmon, pers comm Chr3 9,306,265 9,317,285 GRMZM2G180246 gif1 Nelissen et al., 2015 Chr1 273,393,236 273,396,891 GRMZM2G154169 gif2 Chr4 5,380,348 5,385,430 Zm00001d023767 gif3 v4 Chr10 19,457,326 19,463,711 GRMZM2G114642 gl1 Classical Gene Chr7 118,550,916 118,556,690 GRMZM2G118243 gl13 Li et al., 2013 Chr3 10,276,457 10,286,585 GRMZM2G160730 gl15 Classical Gene Chr9 96,744,684 96,748,035 GRMZM2G098239 gl2 Classical Gene Chr2 10,630,672 10,633,711 GRMZM2G162434 gl3 Liu et al., 2012 Chr4 185,828,677 185,830,259 AC205703.4_FG006 gl8 Classical Gene Chr5 181,248,005 181,251,026 GRMZM2G087323 gl8b from: BT066740 Chr4 132,787,074 132,790,535 GRMZM2G473711 gla3 Chr5 7,263,570 7,266,166 GRMZM2G067919 glb1 Classical Gene Chr1 258,423,143 258,426,448 GRMZM2G026703 glb2 Classical Gene Chr1 287,133,859 287,135,934 GRMZM2G410134 glb3 from Maize Cell Genomics Project (Oct 2013) Chr6 156,729,182 156,730,333 GRMZM2G153704 glct1 from: BT040792 Chr8 12,789,263 12,803,873 GRMZM2G469969 gldh1 alignment of B73_v2 to cDNA AY109467 (Mar 2013 MS) Chr2 146,649,171 146,653,569 GRMZM2G026833 glk1 from AF318580 Chr9 2,711,604 2,714,038 GRMZM2G083472 glk10 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 58,165,088 58,167,724 GRMZM2G064197 glk101 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 83,167,441 83,173,051 AC233960.1_FG003 glk11 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 200,029,375 200,031,847 GRMZM2G401835 glk12 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 98,583,806 98,586,467 GRMZM2G348238 glk14 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 10,524,574 10,526,809 GRMZM2G162409 glk15 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 39,518,700 39,524,889 GRMZM2G035370 glk16 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 3,109,831 3,112,898 GRMZM2G006477 glk17 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 54,344,216 54,350,977 GRMZM2G010920 glk18 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 77,781,452 77,784,526 GRMZM2G396825 glk19 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 55,169,832 55,172,779 GRMZM2G333083 glk2 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 61,962,138 61,964,866 GRMZM2G106185 glk20 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 194,303,751 194,306,883 GRMZM2G315506 glk22 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 31,335,510 31,339,291 GRMZM2G039074 glk23 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 254,304,178 254,313,183 GRMZM2G060485 glk24 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 93,274,325 93,277,370 AC234155.1_FG002 glk25 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 119,108,477 119,111,419 GRMZM2G009060 glk26 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 52,392,455 52,394,837 GRMZM2G173882 glk27 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 237,012,379 237,014,288 GRMZM2G100176 glk28 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 2,630,972 2,634,436 GRMZM2G070865 glk29 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 158,095,257 158,100,338 GRMZM2G471600 glk3 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 104,345,279 104,346,616 GRMZM2G374986 glk30 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 153,719,210 153,723,103 GRMZM2G100709 glk31 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 93,393,018 93,401,220 GRMZM2G454449 glk32 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 111,271,909 111,274,197 AC219020.4_FG002 glk33 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 105,920,220 105,922,516 GRMZM2G081671 glk34 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 109,631,596 109,634,230 GRMZM5G846506 glk35 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 153,730,130 153,732,080 GRMZM2G125704 glk36 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 12,354,844 12,357,846 GRMZM2G069525 glk37 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 17,494,663 17,498,413 GRMZM2G113742 glk38 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 221,627,183 221,637,379 GRMZM2G477238 glk39 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 145,144,168 145,146,397 GRMZM2G159119 glk4 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 5,125,137 5,127,242 GRMZM2G090230 glk41 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 137,379,294 137,383,113 GRMZM2G370425 glk42 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 114,449,322 114,452,475 GRMZM2G701218 glk43 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 155,372,479 155,375,684 GRMZM2G124540 glk44 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 280,284,828 280,286,869 GRMZM2G379656 glk45 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 234,479,845 234,481,852 GRMZM2G060834 glk47 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 199,338,568 199,343,584 GRMZM5G887276 glk48 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 6,525,346 6,530,541 GRMZM2G168002 glk49 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 83,222,890 83,225,112 GRMZM2G016370 glk5 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 5,388,541 5,390,606 GRMZM2G034563 glk50 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 165,151,519 165,153,474 GRMZM2G398055 glk51 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 147,216,522 147,218,561 GRMZM2G124495 glk52 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 146,575,608 146,578,425 GRMZM2G052544 glk53 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 86,297,888 86,301,099 GRMZM2G074908 glk54 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 180,310,733 180,312,482 GRMZM2G123308 glk55 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 77,348,006 77,352,823 GRMZM2G067702 glk56 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 156,260,024 156,261,399 GRMZM2G117854 glk58 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 155,715,032 155,718,706 AC155434.2_FG005 glk59 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 173,860,841 173,863,018 GRMZM2G117193 glk6 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 213,277,645 213,280,082 GRMZM2G173943 glk7 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 83,291,537 83,295,947 GRMZM2G171468 glk8 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 6,146,192 6,148,391 AC234520.1_FG003 glk9 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 164,385,468 164,386,298 GRMZM2G098290 gln1 Classical Gene Chr10 145,900,776 145,906,241 GRMZM2G024104 gln2 Classical Gene Chr1 267,960,169 267,963,551 GRMZM2G046601 gln3 Classical Gene Chr9 146,319,631 146,327,940 GRMZM2G050514 gln3 Classical Gene Chr1 27,978,351 27,982,007 GRMZM5G872068 gln4 Classical Gene Chr5 205,293,914 205,297,428 GRMZM2G036464 gln5 Classical Gene Chr4 167,111,248 167,114,579 GRMZM2G050514 gln6 Classical Gene Chr1 27,978,351 27,982,007 GRMZM2G064096 glp1 from: EU958158 Chr6 123,959,994 123,961,169 GRMZM2G016890 glu1 Classical Gene Chr10 34,240,659 34,246,077 GRMZM2G008247 glu2 Classical Gene Chr10 37,762,909 37,767,713 GRMZM2G014844 glu3 from: EU957786 Chr10 34,733,949 34,737,952 GRMZM2G181192 glx1 from: AY241545 Chr10 60,090,336 60,096,837 GRMZM2G078143 gly1 from EU962459 Chr4 20,795,669 20,799,891 GRMZM2G452178 gn1 Classical Gene Chr2 237,298,075 237,304,344 GRMZM2G129246 go1 Chr7 5,528,435 5,532,236 GRMZM2G080079 gol1 Classical Gene Chr4 182,134,219 182,136,764 GRMZM2G165919 gols1 Chr1 51,531,588 51,533,796 GRMZM5G872256 gols3 Chr9 134,152,466 134,154,240 GRMZM2G113414 gos1 Chr3 189,403,504 189,406,550 GRMZM2G094712 got1 from B73_V2 Chr3 195,377,312 195,383,470 GRMZM5G836910 got2 Classical Gene Chr5 213,953,336 213,958,271 GRMZM2G146677 got3 from alignment of B73)V2 to sequence BT016777.1 Chr5 146,880,878 146,886,034 GRMZM2G400604 got4 from CornCyc 4.0 and Gramene (2014) Arabidopsis Orthlog Chr3 174,411,027 174,414,395 GRMZM2G033799 got5 from Tausta et al 2014 Chr8 100,920,138 100,924,873 GRMZM2G337113 gpa1 Classical Gene Chr2 42,886,006 42,888,042 GRMZM2G083195 gpat1 from: EU962835 Chr3 178,232,720 178,236,298 GRMZM5G845611 gpb1 from EU956029 Chr1 6,404,117 6,406,779 GRMZM2G046804 gpc1 Classical Gene Chr4 36,912,994 36,917,779 GRMZM2G180625 gpc2 Classical Gene Chr6 6,901,483 6,906,034 GRMZM2G071630 gpc3 Classical Gene Chr4 133,130,993 133,134,382 GRMZM2G176307 gpc4 from: BT042907 Chr5 181,570,933 181,575,725 GRMZM2G130230 gpdh1 Chr2 37,085,168 37,093,582 GRMZM2G094742 gpm4 Chr1 177,072,656 177,077,812 GRMZM2G174738 gpm46 from aligment to BT016800 [Fig 1 Kirchberger et al 2007) Chr9 85,075,052 85,078,713 GRMZM2G119411 gpm6 Chr9 25,726,920 25,741,443 GRMZM2G031981 gpm7 Chr2 13,838,928 13,861,148 GRMZM2G016622 gpm930 Chr7 38,037,621 38,039,486 GRMZM2G035268 gpn1 Chr4 84,132,782 84,137,970 GRMZM2G180720 gpt1 from: AF020813 Chr10 58,309,702 58,313,911 GRMZM2G098784 gras1 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 140,092,351 140,096,097 GRMZM2G110579 gras10 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 192,899,281 192,902,025 GRMZM2G097456 gras11 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 162,247,332 162,249,303 GRMZM5G826526 gras12 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 214,641,511 214,642,665 GRMZM2G140094 gras13 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 187,219,736 187,222,248 GRMZM2G070371 gras14 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 231,610,740 231,612,552 GRMZM5G874545 gras15 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 232,137,122 232,158,937 GRMZM2G335814 gras16 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 248,734,599 248,737,101 GRMZM2G143433 gras17 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 120,520,869 120,522,119 GRMZM2G011947 gras18 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 55,555,919 55,556,867 GRMZM2G172657 gras19 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 161,941,687 161,944,142 GRMZM2G129154 gras2 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 158,560,400 158,562,023 GRMZM2G116638 gras21 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 137,434,183 137,440,188 GRMZM2G173429 gras22 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 135,825,173 135,827,459 GRMZM2G157679 gras23 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 180,798,590 180,801,759 GRMZM2G140085 gras24 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 187,217,605 187,218,942 GRMZM2G420280 gras25 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 51,272,702 51,274,207 GRMZM5G868355 gras26 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 839,965 841,260 GRMZM2G110067 gras27 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 71,030,279 71,032,027 GRMZM2G342217 gras28 Chr4 21,604,764 21,607,924 AC198366.3_FG004 gras29 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 1,890,881 1,892,401 GRMZM2G179325 gras3 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 155,690,714 155,694,188 GRMZM2G176537 gras30 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 117,338,432 117,340,217 GRMZM5G825321 gras31 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 19,769,962 19,772,850 GRMZM2G051785 gras32 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 27,346,189 27,348,215 GRMZM2G079470 gras33 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 88,488,422 88,491,040 GRMZM2G163427 gras34 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 842,617 845,669 GRMZM2G386362 gras35 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 4,624,290 4,626,096 GRMZM2G348780 gras36 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 161,047,325 161,049,647 GRMZM2G015080 gras37 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 150,778,730 150,782,551 GRMZM2G098517 gras38 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 161,325,637 161,329,188 GRMZM2G408012 gras39 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 181,911,451 181,912,595 GRMZM2G082387 gras4 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 150,869,807 150,871,966 GRMZM2G368909 gras40 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 293,715,271 293,717,691 GRMZM5G885274 gras41 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 205,139,992 205,141,687 AC234164.1_FG004 gras42 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 24,984,785 24,987,244 GRMZM5G895672 gras43 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 827,079 829,016 GRMZM2G028039 gras45 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 149,430,555 149,437,059 GRMZM2G001426 gras46 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 69,955,114 69,957,195 GRMZM2G089782 gras47 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 124,035,075 124,037,072 GRMZM2G018254 gras48 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 513,060 515,231 GRMZM5G821439 gras49 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 204,949,825 204,954,417 GRMZM2G146018 gras5 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 142,759,880 142,761,574 GRMZM2G159475 gras50 from Entrez Gene Chr3 125,733,039 125,735,799 GRMZM2G028608 gras51 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 46,590,168 46,592,051 GRMZM2G109869 gras52 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 15,351,727 15,354,059 GRMZM2G060265 gras53 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 1,953,455 1,955,531 GRMZM2G106548 gras54 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 158,406,894 158,408,665 GRMZM2G104342 gras55 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 9,827,131 9,829,504 GRMZM2G037286 gras56 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 155,175,171 155,176,649 GRMZM2G089662 gras57 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 38,410,832 38,413,066 GRMZM2G132794 gras58 assigned by the Grassius project, (Yilmaz et al 2009); also From: Slewinski et al., 2014 Chr1 77,494,290 77,496,510 AC204621.4_FG006 gras59 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 1,274,853 1,275,830 GRMZM2G346706 gras6 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 133,612,993 133,614,885 GRMZM2G089636 gras60 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 38,422,200 38,424,095 GRMZM2G055263 gras61 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 37,809,278 37,810,975 GRMZM2G313078 gras62 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 156,946,311 156,947,989 GRMZM2G418899 gras63 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 162,852,139 162,862,787 GRMZM2G425366 gras64 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 219,524,850 219,526,665 GRMZM2G133169 gras65 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 270,571,160 270,573,052 AC200124.3_FG005 gras66 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 62,906,676 62,907,011 GRMZM2G049159 gras67 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 40,143,545 40,147,542 GRMZM2G073823 gras68 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 829,955 831,938 GRMZM2G153333 gras69 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 148,102,723 148,106,458 GRMZM2G013016 gras7 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 166,194,240 166,195,917 GRMZM2G114680 gras70 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 103,353,117 103,362,197 GRMZM2G117949 gras71 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 117,530,782 117,531,764 GRMZM2G073805 gras72 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 832,522 834,779 GRMZM2G125501 gras73 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 209,545,748 209,547,741 GRMZM2G359304 gras74 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 123,178,843 123,180,450 GRMZM2G431309 gras75 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 208,500,828 208,504,903 GRMZM2G028438 gras76 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 156,049,665 156,051,935 GRMZM5G889326 gras77 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 137,480,065 137,481,525 GRMZM2G037792 gras79 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 138,720,419 138,723,128 GRMZM2G098800 gras80 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 153,223,584 153,226,721 GRMZM2G169636 gras81 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 165,196,140 165,197,777 GRMZM2G106356 gras82 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 2,656,855 2,659,044 GRMZM2G073779 gras83 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 836,061 838,338 GRMZM2G106336 gras84 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 2,654,200 2,655,918 GRMZM2G019060 gras85 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 209,040,871 209,042,963 GRMZM2G317287 gras86 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 1,886,674 1,888,997 GRMZM2G091656 gras9 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 213,905,717 213,907,179 GRMZM2G102499 grf1 Classical Gene Chr2 41,931,698 41,935,612 GRMZM2G078641 grf2 Chr10 123,126,089 123,136,710 GRMZM5G893117 grf9 Chr5 211,773,221 211,774,543 GRMZM2G178261 grftf1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 272,415,607 272,419,742 GRMZM2G105335 grftf10 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 177,152,123 177,154,056 GRMZM5G850129 grftf11 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 108,478,031 108,479,906 GRMZM2G067743 grftf12 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 9,818,084 9,819,919 GRMZM2G045977 grftf13 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 196,193,200 196,194,593 GRMZM5G853392 grftf14 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 8,709,195 8,720,923 GRMZM2G099862 grftf15 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 225,828,392 225,831,803 GRMZM2G004619 grftf2 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 199,378,455 199,380,799 GRMZM2G096709 grftf3 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 145,016,797 145,019,476 GRMZM2G018414 grftf4 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 257,246,035 257,248,752 GRMZM2G129147 grftf5 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 140,394,154 140,397,947 GRMZM2G034876 grftf6 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 200,344,613 200,348,143 GRMZM2G098594 grftf7 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 60,352,538 60,355,691 GRMZM2G041223 grftf8 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 12,202,775 12,208,055 GRMZM2G124566 grftf9 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 155,831,893 155,833,246 GRMZM2G021694 GRMZM2G021694 From Sequence in Yang et al., 2016 Chr2 27,625,614 27,627,505 GRMZM2G023347 GRMZM2G023347 Chr5 17,340,297 17,343,212 GRMZM2G033962 GRMZM2G033962 Jamann et al., 2017 Chr2 219,435,832 219,441,286 GRMZM2G043191 GRMZM2G043191 Chr1 253,852,796 253,855,290 GRMZM2G048522 GRMZM2G048522 Chr1 210,142,896 210,145,204 GRMZM2G055238 GRMZM2G055238 Chr6 9,651,143 9,652,873 GRMZM2G055704 GRMZM2G055704 Chr1 5,524,395 5,526,067 Zm00001d027454 GRMZM2G055704 v4 Chr1 5,603,127 5,604,467 GRMZM2G077227 GRMZM2G077227 Chr3 5,995,366 5,998,366 GRMZM2G085218 GRMZM2G085218 Jamann et al., 2017 Chr9 106,530,026 106,531,123 GRMZM2G097297 GRMZM2G097297 Chr4 193,094,389 193,096,319 GRMZM2G102770 GRMZM2G102770 Je et al., 2016 Chr3 3,428,861 3,429,262 GRMZM2G119067 GRMZM2G119067 Chr9 127,725,764 127,727,228 GRMZM2G128995 GRMZM2G128995 Chr8 77,266,793 77,270,611 GRMZM2G132169 GRMZM2G132169 Chr3 183,701,021 183,703,536 GRMZM2G138074 GRMZM2G138074 Chr3 187,768,902 187,771,862 GRMZM2G145152 GRMZM2G145152 Chr7 127,613,281 127,615,125 GRMZM2G153722 GRMZM2G153722 Pace et al., 2015 Chr4 62,590,194 62,601,980 GRMZM2G154580 GRMZM2G154580 Jamann et al., 2017 Chr1 90,223,947 90,224,841 GRMZM2G158062 GRMZM2G158062 Chr7 155,653,647 155,658,404 GRMZM2G161004 GRMZM2G161004 Chr1 188,202,887 188,206,003 GRMZM2G179768 GRMZM2G179768 Chr5 205,986,569 205,987,795 GRMZM2G315431 GRMZM2G315431 Chr7 103,904,514 103,907,063 GRMZM2G329181 GRMZM2G329181 Chr1 286,049,789 286,052,959 GRMZM2G350428 GRMZM2G350428 Je et al., 2016 Chr5 3,782,236 3,785,900 GRMZM2G359322 GRMZM2G359322 Jamann et al., 2017 Chr9 123,215,070 123,216,079 GRMZM2G380227 GRMZM2G380227 Chr1 197,608,242 197,610,896 GRMZM2G391746 GRMZM2G391746 Je et al., 2016 Chr2 4,045,899 4,046,558 GRMZM2G418415 GRMZM2G418415 Chr2 206,376,607 206,378,103 GRMZM2G423617 GRMZM2G423617 Je et al., 2016 Chr8 24,647,332 24,648,491 GRMZM2G427603 GRMZM2G427603 Je et al., 2016 Chr10 145,857,098 145,858,255 GRMZM2G443509 GRMZM2G443509 Chr10 113,181,083 113,188,620 GRMZM2G480050 GRMZM2G480050 Je et al., 2016 Chr7 15,467,965 15,468,908 GRMZM2G080603 grp1 Classical Gene Chr1 178,503,667 178,505,233 GRMZM2G009448 grp2 Chr10 17,611,993 17,615,725 GRMZM2G154954 grp3 Classical Gene Chr5 31,464,367 31,465,552 GRMZM2G025205 grp4 from: AB014475 Chr2 130,608,944 130,609,749 GRMZM2G150295 grx1 from T12674 Chr2 30,571,551 30,574,948 GRMZM2G111579 gsh1 Chr6 24,549,311 24,554,370 GRMZM2G421491 gsht1 B73_2 alignment to sequence accession FJ573212 Chr1 276,882,449 276,887,250 GRMZM2G172322 gsr1 Classical Gene Chr1 12,985,602 12,991,971 Zm00001d052263 gss1 v4 Chr4 185,228,834 185,234,452 GRMZM2G116273 gst1 Classical Gene Chr8 172,671,226 172,674,089 GRMZM2G096153 gst10 Chr1 7,861,824 7,863,470 GRMZM2G119499 gst11 Chr1 7,819,661 7,821,095 GRMZM2G096269 gst12 Chr1 7,854,954 7,856,758 GRMZM2G126781 gst13 Chr9 151,975,181 151,977,920 GRMZM2G175134 gst14 Chr1 85,725,085 85,726,426 GRMZM2G150474 gst15 Chr8 127,252,872 127,255,231 GRMZM5G895383 gst16 Chr7 147,866,596 147,870,180 GRMZM2G064255 gst17 Chr5 174,453,111 174,454,058 GRMZM2G019090 gst18 from: AF244683 Chr3 136,292,387 136,351,651 GRMZM2G335618 gst19 Chr6 104,021,616 104,022,697 GRMZM2G132093 gst2 Christensen et al. 2015 Chr10 90,214,397 90,215,794 GRMZM2G447632 gst20 Chr3 206,949,798 206,950,761 GRMZM2G428168 gst21 Chr3 149,352,435 149,353,721 GRMZM2G330635 gst22 Chr10 96,774,298 96,775,703 GRMZM2G416632 gst23 Chr7 128,406,348 128,407,955 GRMZM2G032856 gst24 Chr5 211,087,584 211,088,858 GRMZM2G161905 gst25 Chr9 155,866,676 155,867,611 GRMZM2G363540 gst26 Chr4 37,262,740 37,264,743 GRMZM2G077206 gst27 aligns to AF244692 Chr8 136,446,031 136,447,290 GRMZM2G146475 gst28 Chr3 149,448,034 149,449,090 GRMZM2G127789 gst29 Chr3 149,351,129 149,351,997 GRMZM2G044383 gst30 Chr1 81,787,076 81,788,381 GRMZM2G475059 gst31 Chr1 8,107,800 8,109,879 GRMZM2G041685 gst32 Chr1 81,512,105 81,512,883 GRMZM2G145069 gst34 Chr1 81,325,327 81,326,926 Zm00001d029696 gst34 v4 Chr1 82,924,832 82,926,012 GRMZM2G161891 gst35 Chr9 155,857,221 155,858,230 GRMZM2G178079 gst37 Chr1 81,588,783 81,594,131 GRMZM2G066369 gst38 Chr1 81,649,181 81,650,653 GRMZM2G028821 gst39 Chr1 81,612,701 81,613,806 GRMZM2G146246 gst4 Classical Gene Chr3 155,015,581 155,017,338 GRMZM2G054653 gst40 Chr1 81,526,010 81,527,198 GRMZM2G097989 gst41 Chr6 147,253,085 147,254,465 GRMZM2G025190 gst42 Chr1 81,450,790 81,452,151 GRMZM2G308687 gst5 Chr1 285,410,265 285,411,865 GRMZM2G129357 gst6 Chr7 5,520,895 5,524,522 GRMZM2G028556 gst7 Chr3 149,477,875 149,478,958 GRMZM2G156877 gst8 Chr3 194,233,310 194,235,176 GRMZM2G126763 gst9 Chr9 151,986,613 151,988,051 GRMZM2G005624 gt1 from Whipple et al 2011 Chr1 23,240,104 23,243,489 GRMZM2G177412 gtr1 from: W21756; B73_v2 model provided by A Huffaker May 2013 for propep2 Chr10 144,041,132 144,046,169 GRMZM2G048012 gts1 Chr3 8,594,070 8,599,931 GRMZM2G432850 gun1 Chr1 147,903,774 147,907,639 GRMZM2G464328 gun4 Belcher et al., 2015 Chr10 5,645,820 5,646,965 GRMZM2G138689 gz50 from: AF371263 Chr7 120,206,897 120,208,211 GRMZM2G042231 haf101b Chr9 94,384,689 94,388,247 GRMZM2G046021 hag101 assigned by the Grassius project, (Yilmaz et al 2009) to hagtf23 Chr5 33,838,765 33,844,703 AC209858.4_FG004 hagtf1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 11,299,653 11,300,336 GRMZM2G100872 hagtf11 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 37,226,550 37,231,577 GRMZM2G126856 hagtf12 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 77,310,976 77,311,742 GRMZM2G162056 hagtf13 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 118,365,107 118,365,860 GRMZM5G875676 hagtf14 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 224,059,127 224,063,731 GRMZM2G371912 hagtf15 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 145,855,491 145,858,353 GRMZM2G333775 hagtf16 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 222,666,939 222,668,487 GRMZM2G137961 hagtf17 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 224,625,939 224,628,844 GRMZM2G055141 hagtf18 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 31,089,308 31,092,725 GRMZM2G011624 hagtf19 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 163,657,377 163,666,263 GRMZM2G114184 hagtf2 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 21,720,037 21,721,470 GRMZM2G059302 hagtf20 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 192,962,918 192,974,114 GRMZM2G431445 hagtf21 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 4,426,539 4,427,138 GRMZM2G176723 hagtf22 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 14,609,875 14,610,673 GRMZM2G479325 hagtf24 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 92,208,775 92,210,342 GRMZM2G169326 hagtf25 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 199,021,128 199,022,386 GRMZM2G046288 hagtf26 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 210,937,687 210,940,587 GRMZM2G049730 hagtf27 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 95,875,402 95,877,132 GRMZM2G402538 hagtf28 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 124,479,190 124,483,759 GRMZM2G062657 hagtf29 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 142,637,425 142,646,491 GRMZM2G131618 hagtf3 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 226,679,443 226,680,502 GRMZM2G701207 hagtf30 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 154,534,441 154,541,243 GRMZM2G458082 hagtf31 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 2,295,884 2,296,892 GRMZM2G302778 hagtf32 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 27,695,451 27,697,345 GRMZM5G813007 hagtf33 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 161,697,850 161,703,669 GRMZM2G034495 hagtf34 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 100,928,654 100,930,976 GRMZM2G050137 hagtf35 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 104,883,790 104,886,205 GRMZM2G096352 hagtf36 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 149,311,288 149,315,650 GRMZM2G136389 hagtf37 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 150,989,308 151,005,342 AC149475.2_FG007 hagtf38 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 152,822,528 152,823,205 GRMZM2G134426 hagtf39 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 156,523,971 156,546,958 GRMZM2G135849 hagtf4 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 226,894,220 226,895,735 GRMZM2G137715 hagtf40 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 51,010,484 51,019,069 GRMZM2G057554 hagtf41 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 123,707,093 123,710,625 GRMZM2G359735 hagtf42 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 126,160,152 126,165,437 GRMZM5G818977 hagtf43 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 143,741,016 143,743,695 GRMZM2G099305 hagtf6 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 279,963,848 279,966,746 GRMZM2G031062 hagtf7 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 287,272,867 287,273,796 GRMZM2G342856 hagtf8 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 287,341,950 287,342,703 GRMZM2G478798 hagtf9 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 287,360,790 287,362,436 GRMZM2G044126 ham101 Chr2 213,200,911 213,205,830 GRMZM5G851405 hat1 Chr7 95,111,087 95,115,489 GRMZM2G067402 hb1 aligns to cDNA AF236080 Chr9 145,596,856 145,598,153 GRMZM2G004334 hb10 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 109,244,071 109,247,202 GRMZM2G064466 hb100 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 82,921,613 82,926,989 GRMZM2G111964 hb101 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 25,478,199 25,487,470 GRMZM2G139963 hb102 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 14,957,965 14,960,921 GRMZM2G162481 hb106 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 133,354,525 133,358,466 GRMZM2G062244 hb107 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 208,276,499 208,277,537 GRMZM2G060050 hb108 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 6,753,231 6,754,253 GRMZM5G805026 hb109 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 170,258,101 170,261,292 GRMZM2G127537 hb11 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 123,539,134 123,541,042 GRMZM2G061101 hb110 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 257,512,113 257,518,809 GRMZM2G003304 hb112 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 218,768,608 218,773,418 GRMZM2G060541 hb113 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 149,427,195 149,428,878 GRMZM2G381748 hb114 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 137,335,415 137,341,548 GRMZM2G021339 hb115 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 165,861,785 165,863,994 GRMZM2G069274 hb116 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 185,489,797 185,493,650 GRMZM2G386276 hb118 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 189,749,774 189,754,836 GRMZM2G003509 hb119 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 173,247,423 173,257,862 AC233899.1_FG004 hb12 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 149,912,584 149,914,098 GRMZM2G056600 hb120 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 129,296,234 129,298,384 GRMZM2G131476 hb121 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 109,642,904 109,644,735 GRMZM2G028622 hb122 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 146,494,874 146,496,217 GRMZM2G074645 hb123 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 95,285,620 95,290,526 GRMZM2G023291 hb124 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 251,772,748 251,774,599 GRMZM2G034113 hb126 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 195,705,583 195,707,271 GRMZM2G119999 hb127 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 139,960,481 139,962,631 GRMZM2G041462 hb128 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 142,432,248 142,434,060 GRMZM2G142962 hb129 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 198,225,939 198,227,907 GRMZM2G104204 hb13 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 160,792,661 160,793,924 GRMZM2G314064 hb130 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 52,343,963 52,347,384 GRMZM2G111204 hb131 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 175,320,204 175,326,578 GRMZM2G140083 hb16 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 131,860,635 131,861,792 GRMZM2G118063 hb17 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 58,000,726 58,009,266 GRMZM2G004957 hb18 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 84,242,542 84,246,083 GRMZM2G478396 hb19 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 166,836,265 166,837,239 GRMZM2G168898 hb2 alingns to cDNA DQ171946 Chr6 159,342,531 159,343,955 GRMZM2G060507 hb20 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 154,007,940 154,011,643 GRMZM2G076272 hb21 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 58,196,208 58,199,144 GRMZM2G178741 hb22 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 151,525,953 151,528,343 GRMZM2G166041 hb24 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 238,046,062 238,047,920 GRMZM2G178102 hb25 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 123,281,942 123,288,759 GRMZM2G010929 hb26 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 14,086,644 14,092,137 GRMZM2G426140 hb27 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 102,549,951 102,556,475 GRMZM2G033138 hb28 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 79,734,099 79,747,217 GRMZM2G125294 hb29 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 68,635,067 68,646,943 GRMZM2G122750 hb3 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 164,671,161 164,681,928 GRMZM2G327059 hb30 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 5,080,780 5,086,704 GRMZM2G011588 hb33 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 256,543,119 256,549,354 GRMZM2G002915 hb34 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 178,781,917 178,784,182 GRMZM2G333565 hb35 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 212,127,074 212,129,332 GRMZM2G396114 hb36 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 273,157,848 273,168,093 GRMZM2G148098 hb37 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 13,673,081 13,677,600 GRMZM2G013617 hb38 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 56,969,090 56,972,316 GRMZM2G106276 hb4 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 20,880,508 20,881,839 GRMZM2G158403 hb40 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 155,487,601 155,494,622 GRMZM2G117164 hb41 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 190,526,953 190,528,628 GRMZM2G477415 hb42 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 54,874,440 54,875,451 GRMZM2G307397 hb43 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 54,944,892 54,945,953 GRMZM2G307400 hb44 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 54,947,382 54,948,335 GRMZM2G126808 hb45 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 29,542,179 29,544,587 GRMZM2G126239 hb46 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 214,938,624 214,943,016 GRMZM2G474656 hb47 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 160,917,510 160,922,715 GRMZM2G154641 hb48 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 179,564,866 179,569,662 GRMZM2G097349 hb49 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 243,185,151 243,187,447 GRMZM2G132367 hb5 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 19,250,088 19,252,388 AC187157.4_FG005 hb52 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 22,645,969 22,650,386 GRMZM2G044752 hb53 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 21,024,779 21,026,404 GRMZM2G041127 hb54 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 188,712,314 188,714,917 GRMZM2G126170 hb55 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 85,732,538 85,749,435 GRMZM2G047715 hb56 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 121,587,332 121,589,718 GRMZM2G060444 hb57 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 92,273,726 92,276,759 GRMZM2G366130 hb59 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 186,502,150 186,503,354 GRMZM2G458728 hb6 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 212,853,641 212,859,163 GRMZM2G068672 hb60 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 70,173,601 70,175,049 GRMZM2G105834 hb62 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 145,045,937 145,048,121 GRMZM2G116063 hb63 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 178,369,720 178,371,133 GRMZM2G004641 hb64 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 13,640,026 13,643,872 GRMZM2G151266 hb65 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 289,933,104 289,944,419 GRMZM2G351330 hb66 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 22,220,873 22,222,180 GRMZM2G047448 hb67 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 3,392,385 3,393,860 GRMZM2G469551 hb69 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 230,596,368 230,608,346 GRMZM2G122076 hb7 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 77,636,576 77,641,035 GRMZM2G396527 hb70 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 133,750,205 133,750,699 GRMZM2G145690 hb71 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 211,123,234 211,127,092 GRMZM2G170958 hb73 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 70,352,497 70,354,031 GRMZM2G087741 hb74 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 53,883,227 53,893,066 GRMZM2G001289 hb75 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 8,289,450 8,295,761 GRMZM2G125976 hb76 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 151,227,594 151,231,779 GRMZM2G134260 hb77 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 20,839,231 20,841,005 GRMZM2G148074 hb78 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 93,082,039 93,083,670 GRMZM2G370332 hb79 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 94,481,164 94,484,870 GRMZM2G135447 hb8 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 281,887,974 281,894,959 GRMZM5G830671 hb81 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 88,279,708 88,280,617 GRMZM2G122537 hb82 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 30,106,417 30,108,536 GRMZM2G126646 hb83 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 177,612,036 177,616,331 GRMZM2G099319 hb84 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 179,614,336 179,618,197 GRMZM2G008286 hb86 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 80,197,949 80,198,613 GRMZM2G163641 hb87 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 85,249,981 85,252,420 GRMZM2G038252 hb88 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 26,128,999 26,132,973 GRMZM2G339751 hb89 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 168,495,729 168,496,249 GRMZM2G351018 hb9 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 174,048,466 174,058,838 GRMZM2G419252 hb90 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 89,175,622 89,178,462 GRMZM2G122897 hb91 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 142,812,773 142,817,535 GRMZM2G094935 hb92 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 161,060,698 161,065,860 GRMZM2G318412 hb93 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 227,700,670 227,702,965 GRMZM2G108933 hb94 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 181,120,106 181,123,399 GRMZM2G438260 hb96 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 92,119,412 92,123,393 GRMZM5G803812 hb98 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 35,029,700 35,031,902 GRMZM2G159357 hb99 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 210,208,545 210,222,742 GRMZM2G161435 hbtf2 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 152,442,185 152,445,449 GRMZM5G898735 hcf106 Classical Gene Chr2 65,813,104 65,819,647 GRMZM2G151529 hcf106c Classical Gene Chr10 110,944,324 110,948,048 GRMZM2G002165 hcf148 Belcher et al., 2015 Chr3 188,589,432 188,595,258 GRMZM2G121960 hcf3 from Hammani et al 2012 Chr1 49,770,451 49,792,278 GRMZM2G038013 hcf60 Belcher et al., 2015 Chr10 148,969,561 148,970,286 GRMZM2G030628 hcp101a Chr4 66,925,030 66,935,727 GRMZM2G060669 hcp101b Chr4 238,860,480 238,864,568 GRMZM2G061806 hct1 Wang et al.,2015 Chr1 17,782,100 17,783,717 GRMZM2G034360 hct10 Chr8 166,031,514 166,034,207 GRMZM2G156296 hct11 called hct11 per Erich Grotewold Chr7 117,397,049 117,407,481 GRMZM2G179703 hct12 Chr1 202,955,872 202,958,418 GRMZM2G129266 hct13 Chr1 225,937,241 225,939,365 GRMZM2G114918 hct2 Wang et al.,2015 Chr1 17,842,579 17,844,302 GRMZM2G127251 hct3 Wang et al.,2015 Chr6 107,006,046 107,007,725 GRMZM2G030436 hct4 Wang et al.,2015 Chr1 140,328,950 140,330,902 GRMZM2G158083 hct5 Wang et al.,2015 Chr2 32,452,526 32,458,616 GRMZM2G035584 hct6 Chr5 183,658,122 183,663,110 AC215260.3_FG003 hct7 Wang et al.,2015 Chr3 17,028,296 17,029,723 GRMZM2G178769 hct8 Wang et al.,2015 Chr3 21,151,937 21,153,907 GRMZM2G131165 hct9 Wang et al.,2015 Chr1 211,484,865 211,490,236 GRMZM2G119703 hda102 from: AF440228 Chr2 59,091,885 59,102,871 GRMZM2G136067 hda108 Classical Gene Chr4 65,983,218 65,988,818 GRMZM2G136067 hda108 Chr4 65,983,218 65,988,818 GRMZM2G457889 hda109 from: EU952105 Chr2 210,299,363 210,310,868 GRMZM2G107309 hda110 from: Entrez Gene 541972 Chr7 7,273,053 7,285,361 GRMZM2G137409 hds1 GBWI-67591 (MaizeCyc), GRMZM2G137409 Chr5 182,174,564 182,181,190 GRMZM2G100146 hdt102 Chr8 135,663,882 135,666,488 GRMZM2G107457 hen1 from FJ910136 Chr7 7,266,068 7,271,089 GRMZM2G104081 hex1 from EU971594 & Zhou et al., 2014; Zhang et al., 2014 Chr3 7,079,526 7,083,312 GRMZM2G432801 hex2 from EU972171 & Zhou et al., 2014; Zhang et al., 2014 Chr6 160,433,339 160,440,597 GRMZM2G058745 hex3 from BT068218 & Zhou et al., 2014; Zhang et al., 2014 Chr8 124,182,497 124,187,982 GRMZM2G068913 hex4 Zhou et al., 2014; Zhang et al., 2014 Chr3 152,214,617 152,221,102 GRMZM5G856653 hex5 Zhou et al., 2014; Zhang et al., 2014 Chr3 199,340,491 199,346,889 GRMZM2G171373 hex6 Zhou et al., 2014; Zhang et al., 2014 Chr3 201,861,549 201,871,591 GRMZM2G051806 hex7 Zhou et al., 2014; Zhang et al., 2014 Chr6 130,163,346 130,166,258 GRMZM2G046686 hex8 Zhou et al., 2014; Zhang et al., 2014 Chr6 136,146,698 136,151,875 GRMZM2G467069 hex9 Zhou et al., 2014; Zhang et al., 2014 Chr8 158,729,478 158,739,079 GRMZM2G304548 hfi1 Chr2 160,784,375 160,785,866 GRMZM2G173358 hggt1 from Likka et al 2013 Chr9 93,489,726 93,493,445 GRMZM2G117755 hir1 Classical Gene Chr4 74,484,144 74,488,082 GRMZM2G150762 hir2 from Entrez gene 541820 Chr2 177,284,136 177,287,072 GRMZM2G070659 hir3 Chr6 167,774,457 167,777,264 GRMZM2G401308 his1a from: AW060063 Chr7 11,446,087 11,450,539 GRMZM2G305046 his2a1 Classical Gene Chr9 139,441,605 139,442,697 GRMZM2G071959 his2b1 Classical Gene Chr7 119,943,268 119,944,091 GRMZM2G119071 his2b2 Classical Gene Chr4 63,118,802 63,120,057 GRMZM2G057852 his2b3 from Entrez gene 100274242 Chr2 183,846,599 183,847,686 GRMZM2G306258 his2b4 Entrez Gene Chr3 181,560,116 181,560,956 GRMZM2G342515 his2b5 from: EU970863 Chr4 160,982,217 160,983,377 GRMZM2G151223 hk1 B73_v2 alignment to sequence accession AB042270 Chr5 205,601,061 205,610,801 GRMZM2G471529 hk2 B73_v2 alignment to sequence accession AB102956 Chr3 158,932,008 158,938,325 GRMZM2G158252 hk3 B73_v2 alignment to sequence accession AB102957 Chr5 38,775,552 38,832,527 GRMZM2G155767 hk4 Chr1 269,016,266 269,022,761 GRMZM2G025579 hk5 Chr9 108,537,120 108,544,101 GRMZM2G125943 hk6 Chr4 167,410,132 167,416,477 GRMZM5G881887 hm1 Classical Gene Chr1 199,788,957 199,790,819 GRMZM2G086773 hm2 Classical Gene Chr9 104,241,216 104,242,847 GRMZM2G136859 hma1 Chr1 4,439,061 4,441,061 GRMZM5G834758 hmg1 Classical Gene Chr5 63,828,350 63,830,554 AC186524.3_FG005 hmg101 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 180,986,274 180,988,780 GRMZM2G162284 hmg103 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 198,277,094 198,279,041 GRMZM2G150348 hmg11 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 82,492,934 82,493,876 GRMZM5G842484 hmg12 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 128,066,887 128,073,852 GRMZM2G066528 hmg13 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 146,931,998 146,933,950 GRMZM2G032252 hmg14 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 21,829,304 21,836,106 GRMZM2G013821 hmg2 from: BT041105 Chr5 194,096,097 194,097,995 GRMZM2G156785 hmg3 From: Entrez Gene Chr4 154,652,176 154,654,247 GRMZM2G024247 hmg4 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 210,840,744 210,844,797 GRMZM2G144398 hmg5 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 142,353,620 142,359,570 GRMZM2G060253 hmg9 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 140,132,841 140,135,501 GRMZM2G106133 hmga102 from: AJ131371 & AF291748 Chr1 215,379,973 215,381,486 GRMZM6G310687 hmt1 Chr9 146,516,121 146,519,277 GRMZM2G039166 hmt4 from: AF297047 Chr3 192,284,006 192,285,910 GRMZM2G043277 ho2 from chr 6 hit of EU962994 (Shi et al., 2013) Chr6 102,756,604 102,759,557 GRMZM2G157936 ho3 from second chr 9 hit of EU962994 (Shi et al., 2013) Chr9 89,991,673 89,992,909 GRMZM2G080274 hon101 from Entrez Gene 541973 Chr2 16,047,725 16,049,837 GRMZM2G164020 hon110 from Cell Genomics Project (Oct 2013) Chr1 288,803,887 288,805,620 GRMZM2G136369 hox1 from X67561 (chr 8) Chr8 123,435,516 123,441,977 GRMZM2G094935 hox2 from: X67561 (chr 6 hit) Chr6 161,060,698 161,065,860 GRMZM2G314546 hox3 from: AY109382 & assigned by the Grassius project, (Yilmaz et al 2009) to hb32 Chr3 197,462,441 197,475,910 GRMZM2G016439 hp1 from Cell Genomics Project (2013) Chr1 205,263,817 205,266,907 GRMZM2G014154 hp2 Entrez Gene Chr2 166,064,149 166,067,375 GRMZM2G451604 hp3 Chr4 52,969,280 52,972,871 GRMZM6G986387 hpl1 from alignment to sequence AY540745 Chr4 240,875,600 240,876,493 GRMZM2G088396 hppd1 Chr5 83,895,923 83,898,077 GRMZM2G015285 hrbp1 from: Entrez Gene 100383635 Chr2 228,792,133 228,793,917 GRMZM2G168651 hrg1 Classical Gene Chr2 55,391,917 55,393,690 GRMZM2G085924 hsbp1 Classical Gene Chr2 127,723,813 127,725,400 GRMZM2G065355 hsbp2 Entrez Gene 100283717 Chr9 34,805,920 34,808,236 GRMZM2G139082 hscf1 Chr9 107,641,598 107,645,415 GRMZM2G002131 hsftf1 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 186,829,423 186,833,487 GRMZM2G165272 hsftf10 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 142,270,318 142,272,208 GRMZM2G132971 hsftf11 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 287,786,016 287,790,222 GRMZM2G173090 hsftf12 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 59,460,534 59,462,007 GRMZM2G165972 hsftf13 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 12,518,410 12,520,734 GRMZM2G118485 hsftf14 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 28,522,823 28,530,238 AC206165.3_FG007 hsftf15 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 159,812,447 159,814,105 AC205471.4_FG003 hsftf16 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 124,710,390 124,712,153 GRMZM2G003489 hsftf17 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 275,536,823 275,539,066 GRMZM2G105348 hsftf18 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 150,228,697 150,230,232 AC216247.3_FG001 hsftf19 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 63,539,447 63,541,926 GRMZM2G088242 hsftf2 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 185,666,362 185,668,432 GRMZM2G301485 hsftf20 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 137,124,859 137,126,235 GRMZM2G139535 hsftf21 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 125,896,425 125,900,126 GRMZM2G384339 hsftf22 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 889,476 893,867 GRMZM2G089525 hsftf23 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 217,438,918 217,440,728 GRMZM2G010871 hsftf24 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 239,674,470 239,678,097 GRMZM2G086880 hsftf25 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 144,887,947 144,889,311 GRMZM2G025685 hsftf27 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 169,214,787 169,218,220 GRMZM2G118047 hsftf28 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 77,070,952 77,072,996 GRMZM2G179802 hsftf29 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 162,047,215 162,053,475 GRMZM2G005815 hsftf3 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 219,545,854 219,552,097 GRMZM2G125969 hsftf4 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 9,712,577 9,716,596 GRMZM2G115456 hsftf5 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 299,272,434 299,277,717 GRMZM2G059851 hsftf6 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 168,263,116 168,266,561 GRMZM2G098696 hsftf7 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 195,298,840 195,300,584 GRMZM2G164909 hsftf8 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 197,781,323 197,783,002 GRMZM2G026742 hsftf9 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 146,028,201 146,032,662 GRMZM5G844723 hsk1 Classical Gene Chr9 129,484,814 129,489,588 GRMZM2G310431 hsp1 Classical Gene Chr8 168,506,539 168,509,902 GRMZM2G360681 hsp101 Classical Gene Chr6 160,816,570 160,820,239 GRMZM2G422240 hsp17.2 from: EU968243 & X65725 Chr3 20,468,262 20,468,719 GRMZM2G404249 hsp18a gene model GRMZM2G056857 on RefGen_v1 corresponds to the gene model GRMZM2G404249 on RefGen_v2; also from BT070148 Chr9 132,803,660 132,804,501 GRMZM2G034157 hsp18c Classical Gene Chr8 21,620,266 21,621,116 GRMZM2G083810 hsp18f Classical Gene Chr3 8,887,555 8,888,747 GRMZM2G007729 hsp22 Chr4 179,852,643 179,853,912 GRMZM2G149647 hsp26 Chr1 33,464,178 33,465,385 GRMZM6G199466 hsp3 scaffold_369 81 586 GRMZM2G340251 hsp70-4 Classical Gene Chr3 126,479,381 126,484,522 GRMZM5G833699 hsp90 from B73_v3 alignment to sequence accession S59780.1 Chr10 93,697,766 93,700,740 GRMZM2G118453 hstf2 assigned by the Grassius project, (Yilmaz et al 2009) to hstf26 Chr8 173,979,796 173,982,203 GRMZM2G164612 htn1 Closest homolog to Htn1 in B73; Hurni et al., 2015 Chr8 151,637,927 151,643,014 GRMZM5G852396 hvp1 Chr9 18,325,419 18,326,021 GRMZM2G152135 hyd3 from AY844957 Chr10 136,081,567 136,084,686 GRMZM2G164318 hyd4 from GQ131287 Chr2 15,877,183 15,879,464 GRMZM2G382534 hyd5 from DR817188 Chr9 153,962,138 153,964,502 GRMZM2G090051 hyd6 from BQ619575 Chr1 5,373,808 5,376,230 GRMZM2G163683 hyd7 from BT040337 Chr4 236,566,951 236,568,885 GRMZM5G826824 hyd8 Owens et al., 2014 Chr1 6,347,072 6,348,308 GRMZM2G304378 hyp1 Classical Gene Chr9 15,981,191 15,983,094 GRMZM2G137367 iaa1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 6,550,506 6,561,486 GRMZM2G138268 iaa10 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 117,785,060 117,789,665 GRMZM2G167794 iaa11 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 118,083,629 118,085,345 GRMZM2G057067 iaa12 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 199,377,733 199,380,221 GRMZM2G031615 iaa14 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 16,440,811 16,449,027 GRMZM2G148188 iaa15 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 16,521,450 16,523,297 GRMZM2G059544 iaa16 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 39,589,807 39,591,031 GRMZM2G390691 iaa17 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 131,399,345 131,410,844 GRMZM2G142768 iaa18 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 171,402,585 171,405,007 GRMZM2G152796 iaa19 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 4,201,092 4,202,519 GRMZM2G079957 iaa2 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 170,553,927 170,555,938 AC195340.3_FG004 iaa20 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 5,379,304 5,384,290 GRMZM2G077356 iaa21 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 7,780,495 7,783,441 GRMZM2G128421 iaa22 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 17,364,530 17,365,963 GRMZM2G121309 iaa23 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 151,751,416 151,755,323 GRMZM2G030465 iaa24 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 214,460,676 214,461,910 GRMZM2G000158 iaa25 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 80,078,086 80,079,839 GRMZM2G079200 iaa26 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 103,303,641 103,305,338 GRMZM2G147243 iaa28 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 133,380,995 133,384,727 GRMZM2G141205 iaa29 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 146,698,068 146,698,763 GRMZM2G366373 iaa3 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 253,362,067 253,363,413 GRMZM2G074427 iaa30 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 160,362,230 160,365,730 GRMZM2G149449 iaa31 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 9,398,079 9,398,800 GRMZM2G115357 iaa32 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 10,975,561 10,976,899 GRMZM2G048131 iaa33 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 142,810,056 142,811,513 GRMZM5G853479 iaa34 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 814,321 815,001 GRMZM2G573324 iaa36 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 67,598,583 67,602,666 GRMZM2G359924 iaa37 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 108,094,649 108,096,892 GRMZM2G035465 iaa38 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 110,338,289 110,342,132 GRMZM2G159285 iaa4 Chr1 275,098,311 275,101,078 GRMZM2G435290 iaa40 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 4,283,462 4,287,324 GRMZM2G001799 iaa41 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 16,255,609 16,257,497 GRMZM2G479834 iaa42 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 35,447,564 35,453,445 GRMZM2G134517 iaa43 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 134,279,626 134,280,393 GRMZM2G143352 iaa44 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 145,384,711 145,385,639 GRMZM5G809195 iaa5 Chr1 288,465,742 288,467,255 GRMZM5G825707 iaa6 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 128,381,501 128,388,580 GRMZM2G104176 iaa7 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 7,118,667 7,121,305 GRMZM2G004696 iaa8 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 10,076,687 10,080,041 GRMZM2G074742 iaa9 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 48,983,289 48,985,069 GRMZM2G024131 iaglu1 from: L34847 Chr1 262,955,292 262,957,901 GRMZM2G133806 ial1 from: EU962641; assigned by the Grassius project to ldb40 (Yilmaz et al 2009) Chr8 164,174,038 164,177,190 GRMZM2G063151 ibp1 from: X79085 Chr9 140,000,852 140,005,166 GRMZM2G110309 ibp2 Classical Gene Chr1 40,356,719 40,362,217 GRMZM2G056369 icl1 from BT040479 Chr7 154,227,775 154,230,208 GRMZM2G011357 id1 Classical Gene Chr1 239,667,869 239,671,192 Zm00001d035308 idc1 v4 Chr6 20,483,349 20,484,802 GRMZM2G042666 idd7 from: AY754865 Chr7 146,276,397 146,281,153 GRMZM2G179677 iddp1 from: AY754867 Chr1 206,161,656 206,168,807 GRMZM2G090595 iddp10 from: AY754864 Chr5 194,215,974 194,223,601 GRMZM2G432128 idh1 from: BT043437 Chr8 147,224,301 147,229,189 GRMZM5G829778 idh2 from: BT038585 Chr6 165,734,052 165,737,680 GRMZM2G321725 IDP1465 Chr9 147,172,658 147,176,871 GRMZM2G043493 IDP1489 Chr1 56,577,187 56,579,012 GRMZM2G139797 IDP1639 Jia et al., 2016 Chr10 130,166,275 130,168,203 GRMZM2G154574 IDP1657 Chr7 152,997,411 153,005,288 GRMZM2G121514 IDP2375 Chr6 147,413,665 147,418,505 GRMZM2G061662 IDP2440 Chr1 293,217,775 293,228,618 GRMZM2G353822 IDP2454 Chr8 124,537,076 124,538,244 GRMZM2G061043 IDP257 Chr8 166,638,225 166,643,039 GRMZM2G128057 IDP263 Chr10 139,399,452 139,402,605 GRMZM2G103266 IDP441 Chr6 81,850,247 81,856,948 GRMZM2G327189 IDP472 from: EU977091 Chr3 209,919,655 209,921,032 GRMZM2G093716 IDP51 Chr5 172,973,456 172,980,736 GRMZM2G110832 IDP844 Chr9 4,009,489 4,011,176 GRMZM2G118250 ig1 Classical Gene Chr3 169,260,970 169,264,296 GRMZM2G046191 igl1 Classical Gene Chr1 288,331,936 288,337,173 GRMZM2G046191 igl1 from alignment of cDNA AF271384 Chr1 288,331,936 288,337,173 GRMZM2G004583 ij1 Classical Gene Chr7 134,118,864 134,129,700 GRMZM2G017077 im30p1 Classical Gene Chr3 168,411,704 168,416,865 GRMZM2G173251 imd1 from: EU967697 (chr 1 hit) Chr1 44,533,349 44,534,414 GRMZM5G803490 imd2 from: EU968951 Chr2 24,987,243 24,990,796 GRMZM2G104613 imd3 ENTREZ GENE Chr10 148,406,957 148,410,672 GRMZM2G088088 imp1 Chr8 82,956,568 82,961,691 GRMZM2G042733 in1 Classical Gene Chr7 19,360,149 19,366,043 GRMZM2G139300 incw1 Classical Gene Chr5 169,497,597 169,502,089 GRMZM2G123633 incw3 Classical Gene Chr10 114,308,530 114,310,922 GRMZM2G119941 incw4 from: AF043347 Chr2 3,190,291 3,193,646 GRMZM2G434500 ipe1 Chen et al., 2016 Chr1 80,973,413 80,975,997 GRMZM2G108285 ippi1 From homology to Genbank sequence. Chr7 155,598,887 155,602,061 GRMZM2G145029 ippi2 From homology to Genbank sequence. Chr8 104,182,030 104,186,085 GRMZM2G133082 ippi3 From homology to Genbank sequence. Chr6 147,323,465 147,329,028 GRMZM2G097258 ipt1 from NM_001127724 Chr3 145,470,464 145,473,438 GRMZM2G102915 ipt10 from EU797192 and from homology to rice IPT10 acces# AB239807 Chr6 81,887,637 81,889,903 GRMZM2G084462 ipt2 from EU263126 Chr2 63,147,052 63,148,227 GRMZM2G393014 ipt3 based on location given in Vyroubalova et al. 2009 Chr8 151,130,587 151,131,675 GRMZM2G415751 ipt3B based on location given in Vyroubalova et al. 2009 Chr3 207,330,115 207,331,215 GRMZM2G104559 ipt4 from Gene ID: 100158230 Chr7 19,429,668 19,430,971 AC210013.4_FG005 ipt5 from EU263128 Chr5 3,324,796 3,325,809 GRMZM2G116878 ipt6 from EU263129 Chr1 291,634,128 291,635,190 GRMZM2G436770 ipt7 from EU263130 Chr3 67,172,553 67,173,644 GRMZM2G025429 ipt8 from EU263131 Chr6 162,939,562 162,941,480 GRMZM2G018046 ipt9 from primer sequence in Vyroubalova et al., 2009 Chr2 161,360,574 161,361,649 AC226235.2_FG001 irl1 Chr3 30,997,053 30,998,201 GRMZM2G150796 iso3 Chr7 129,134,063 129,145,654 GRMZM2G023194 isp1 from: M77224 Chr10 111,795,775 111,798,782 GRMZM5G803874 isr1 Classical Gene Chr10 138,512,812 138,515,509 GRMZM2G394450 ivr1 Classical Gene Chr2 23,504,839 23,509,410 GRMZM2G089836 ivr2 Classical Gene Chr5 67,537,393 67,540,691 GRMZM2G465553 iws1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 292,209,665 292,211,668 GRMZM2G108716 iws2 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 2,792,516 2,796,308 GRMZM2G050412 jac1 from Cell Genomics project (Oct 2013) Chr6 31,707,695 31,709,328 GRMZM2G142964 jmj1 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 60,821,906 60,898,916 GRMZM2G044301 jmj10 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 134,321,285 134,327,453 GRMZM2G339379 jmj11 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 162,996,669 163,001,414 GRMZM2G054162 jmj12 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 240,883,468 240,895,570 GRMZM2G078198 jmj13 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 201,051,876 201,056,117 GRMZM2G057466 jmj14 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 103,624,693 103,630,846 GRMZM2G060919 jmj15 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 199,272,243 199,280,188 GRMZM2G180086 jmj16 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 44,657,285 44,663,403 GRMZM2G152877 jmj17 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 66,961,410 66,967,126 GRMZM2G321810 jmj18 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 165,491,789 165,497,935 GRMZM2G108589 jmj19 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 1,519,824 1,523,155 GRMZM2G171163 jmj2 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 172,386,710 172,389,864 AC149475.2_FG005 jmj20 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 152,791,245 152,801,912 GRMZM2G383210 jmj21 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 169,239,655 169,259,508 GRMZM2G417089 jmj22 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 248,568,098 248,575,059 GRMZM2G428933 jmj3 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 130,273,915 130,282,483 GRMZM2G027075 jmj4 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 172,459,736 172,468,782 GRMZM2G070885 jmj5 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 106,518,289 106,522,429 GRMZM2G107109 jmj6 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 172,286,685 172,295,419 GRMZM2G156910 jmj7 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 116,655,146 116,661,337 GRMZM2G431157 jmj8 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 19,854,631 19,862,449 GRMZM2G140524 jmj9 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 172,338,861 172,347,926 GRMZM2G056400 kan1 Classical Gene Chr1 215,657,189 215,662,587 GRMZM2G175827 kan3 Classical Gene Chr4 80,099,618 80,112,468 GRMZM2G089803 kao2 Nelissen, et al. 2012 Chr9 140,279,526 140,282,696 GRMZM2G070273 kcbp1 from: XM_008670512 Chr2 3,067,260 3,076,483 GRMZM2G022915 kch1 alignment to RefGen_v2 by cDNA Y07632 gi 2104907 Chr3 214,355,254 214,361,335 GRMZM2G020859 kch2 from: Y09747 (chr 6 hit) Chr6 148,554,980 148,565,653 GRMZM2G081666 kch3 by alignment of cDNA AJ421640 gi 18077658 to RefGen_v2 (M Schaeffer) Chr4 227,476,359 227,480,644 GRMZM2G081666 kch3 Classical Gene Chr4 227,476,359 227,480,644 GRMZM2G093313 kch4 from alignment of cDNA AJ558238 gi 34576238 to B73 RefGen_v2 Chr3 3,843,599 3,847,168 GRMZM2G171279 kch5 assigned by alignment of cDNA Y07632 gi 2104907 on RefGen_v2 Chr8 146,628,450 146,633,412 AC234152.1_FG002 kch6 Chr8 101,614,919 101,619,583 GRMZM2G119256 kds1 Chr8 68,450,787 68,453,575 GRMZM2G159948 kelp1 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 204,699,354 204,701,927 GRMZM2G090213 kelp2 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 172,514,217 172,520,347 GRMZM2G112535 kelp3 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 153,332,086 153,334,819 GRMZM5G889999 kik1 from: U82481 Chr7 156,219,814 156,225,643 GRMZM2G158394 kin1 from: EU955694 Chr7 176,260,711 176,262,411 GRMZM2G163761 kip1 Classical Gene Chr1 256,573,454 256,575,135 GRMZM2G017087 kn1 Classical Gene Chr1 271,407,490 271,415,210 GRMZM2G159431 knox1 assigned by Gramene; confirmed by alignment to protein sequence at proper map location (Mar 2012) Chr1 5,003,070 5,007,708 GRMZM2G002225 knox10 alignment of protein sequence AAB33489 (Mar 2012) Chr5 13,957,726 13,980,235 GRMZM2G055243 knox2 Chr9 93,868,786 93,877,183 GRMZM2G000743 knox3 Classical Gene Chr1 271,693,702 271,695,058 GRMZM5G832409 knox5 Chr6 24,181,173 24,192,653 GRMZM2G370332 knox6 Entrez Gene 100383874 Chr5 94,481,164 94,484,870 GRMZM2G433591 knox7 from: AM182385 Chr4 235,745,133 235,750,283 GRMZM2G059308 ko1 from BT042205 Chr9 79,864,518 79,871,342 GRMZM2G161472 ko2 from EZ104608 Chr9 79,629,933 79,634,006 GRMZM2G042627 kpp1 From U81960 and HQ858748; assigned to fha16 by the Grassius project, (Yilmaz et al 2009) Chr7 19,331,382 19,358,462 GRMZM2G161868 kri1 Chr3 202,434,872 202,437,694 Zm00001d009638 kri2 alignment with AY103782 & T15312 in v4 Chr8 73,989,684 73,993,106 GRMZM2G129569 krp1 Chr4 149,310,956 149,317,153 GRMZM2G436981 krp11 Chr7 1,144,796 1,151,528 GRMZM2G034828 krp13 from: AF272758 Chr1 246,878,397 246,883,986 GRMZM2G054418 krp15 Chr10 133,348,999 133,354,774 GRMZM2G124883 krp16 Chr8 174,510,782 174,515,041 GRMZM2G136838 krp2 Chr9 26,591,337 26,597,907 GRMZM2G173700 krp3 Chr8 123,987,283 123,994,126 GRMZM2G320689 krp4 Chr1 204,903,790 204,910,966 GRMZM2G093391 krp5 from: AF272753 Chr6 105,208,479 105,214,743 GRMZM2G132371 krp8 Chr4 51,919,903 51,926,112 GRMZM5G881464 krp9 from: AF272756 Chr6 127,292,905 127,310,354 GRMZM2G016922 ks1 from: BT067769 Chr1 237,109,339 237,115,584 GRMZM2G093526 ks2 from: BT042236 Chr2 10,574,515 10,578,571 GRMZM2G093603 ks3 from Nelissen et al 2012 Table S2 Chr2 10,562,532 10,567,539 AC214360.3_FG001 ks4 from: BT054450 Chr3 110,200,299 110,204,076 Zm00001d024514 ks5 v4 Chr10 75,446,562 75,449,964 GRMZM2G391312 ks6 from: AFW61735 (Fu et al., 2015) Chr4 53,284,808 53,288,327 GRMZM2G177169 l15 rom B73_v2 alignment to cDNA FJ490677.1 GI:218684530 (July 2011) Chr6 95,481,573 95,484,475 GRMZM2G135019 la1 Dong et al., 2013 Chr4 18,000,248 18,006,785 GRMZM2G140527 lac10 Rius et al., 2016 Chr4 4,216,683 4,219,243 GRMZM2G092483 lbd1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 10,818,799 10,819,994 GRMZM2G154320 lbd10 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 254,949,670 254,950,944 GRMZM2G017319 lbd11 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 255,383,520 255,385,569 GRMZM2G447176 lbd12 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 258,866,950 258,868,413 GRMZM2G011385 lbd13 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 286,409,470 286,410,127 GRMZM2G177110 lbd14 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 209,518,630 209,519,766 AC207888.3_FG009 lbd15 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 234,934,167 234,936,218 GRMZM2G132693 lbd17 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 23,103,082 23,104,417 AC218973.3_FG003 lbd18 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 93,840,474 93,841,301 GRMZM2G092517 lbd20 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 184,175,771 184,177,879 GRMZM2G025758 lbd21 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 192,970,241 192,971,643 GRMZM2G095982 lbd22 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 6,391,031 6,392,616 GRMZM2G079768 lbd23 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 74,723,078 74,724,495 GRMZM2G075499 lbd24 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 170,838,318 170,839,405 GRMZM2G025989 lbd25 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 183,769,526 183,770,541 GRMZM2G079185 lbd26 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 15,203,964 15,206,688 GRMZM2G362627 lbd27 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 18,398,844 18,400,101 GRMZM2G165805 lbd28 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 28,091,948 28,093,028 GRMZM2G386095 lbd29 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 64,768,557 64,769,285 GRMZM2G110913 lbd3 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 33,801,737 33,804,005 GRMZM2G180319 lbd30 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 85,751,370 85,752,655 GRMZM2G044150 lbd31 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 141,232,270 141,233,226 GRMZM2G121487 lbd32 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 147,424,552 147,430,624 GRMZM2G386674 lbd33 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 159,313,186 159,314,511 GRMZM2G704330 lbd34 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 6,439,450 6,441,294 GRMZM5G868471 lbd35 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 81,896,223 81,898,153 GRMZM2G096064 lbd36 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 103,789,363 103,790,421 AC234149.1_FG002 lbd37 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 122,851,972 122,852,823 GRMZM2G073044 lbd38 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 122,998,640 123,000,039 AC214648.3_FG005 lbd39 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 131,315,533 131,316,325 GRMZM2G021095 lbd4 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 44,165,940 44,167,054 GRMZM2G145568 lbd41 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 138,557,713 138,558,785 GRMZM2G150594 lbd42 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 143,011,637 143,013,786 GRMZM5G873586 lbd44 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 3,275,775 3,281,566 GRMZM2G060544 lbd5 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 72,360,144 72,361,438 GRMZM2G044902 lbd6 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 77,152,675 77,154,117 GRMZM2G076327 lbd7 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 124,634,056 124,634,920 GRMZM2G132667 lbd8 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 191,562,085 191,562,888 AC217910.3_FG006 lbd9 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 217,326,067 217,327,326 GRMZM6G851663 lbp1 Forestan et al., 2016 Chr2 58,076,051 58,076,601 GRMZM2G128929 ldh1 from: Z11754 Chr5 67,432,367 67,434,244 GRMZM2G106613 ldp1 from: W21755 Chr3 154,702,548 154,712,172 GRMZM2G011789 lec1 Classical Gene Chr5 204,386,830 204,388,007 GRMZM2G011789 lec1 in silico, MS 2011 Chr5 204,386,830 204,388,007 GRMZM2G174883 leg1 from BT042037 Chr6 40,050,689 40,052,652 AC234157.1_FG002 lem1 Classical Gene Chr1 281,175,269 281,177,006 GRMZM2G044074 les22 Classical Gene Chr1 56,560,198 56,564,777 GRMZM2G036297 lg1 Classical Gene Chr2 4,265,163 4,268,840 GRMZM2G060216 lg2 Classical Gene Chr3 176,845,304 176,853,978 GRMZM2G060216 lg2 Chr3 176,845,304 176,853,978 GRMZM2G087741 lg3 Classical Gene Chr3 53,883,227 53,893,066 GRMZM2G087741 lg3 Chr3 53,883,227 53,893,066 GRMZM2G094241 lg4 alignment to AF457120 sequence accession (Mar 2012) Chr8 130,383,323 130,388,890 GRMZM2G094241 lg4 Classical Gene Chr8 130,383,323 130,388,890 GRMZM2G134382 lgn1 Moon et al, 2013 Chr9 47,658,297 47,660,713 GRMZM2G038519 lhca1 from: Entrez Gene 100191715 Chr2 207,611,861 207,618,663 GRMZM2G351977 lhcb1 Classical Gene Chr8 141,176,051 141,177,936 AC207722.2_FG009 lhcb2 Classical Gene Chr7 147,094,052 147,095,217 GRMZM2G155216 lhcb3 Classical Gene Chr8 70,312,571 70,314,733 GRMZM2G103101 lhcb4 from: T18807 Chr5 209,922,350 209,924,302 GRMZM2G149428 lhcb5 Chr2 220,058,172 220,060,652 GRMZM2G092427 lhcb6 from: U23190 Chr10 147,325,724 147,327,040 GRMZM2G402936 lhcb7 Classical Gene Chr6 165,101,052 165,102,377 GRMZM2G018627 lhcb9 lhcb9 or umc1383 Chr1 247,817,664 247,819,376 GRMZM2G414192 lhcb9 lhcb9 or umc1383 Chr1 247,786,586 247,788,296 GRMZM2G474769 lhy1 Ko et al, 2016 Chr10 78,333,991 78,337,257 GRMZM2G128206 limtf1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 38,621,379 38,628,799 GRMZM2G004959 limtf10 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 21,973,369 21,975,498 GRMZM2G017845 limtf11 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 52,901,117 52,909,594 GRMZM2G010960 limtf12 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 114,357,794 114,367,987 GRMZM2G151934 limtf13 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 140,469,500 140,474,431 GRMZM2G024887 limtf14 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 132,724,522 132,726,075 GRMZM2G160198 limtf2 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 39,040,586 39,044,425 GRMZM2G385236 limtf3 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 123,983,180 123,985,570 GRMZM2G099328 limtf4 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 167,019,236 167,024,935 GRMZM2G342105 limtf5 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 253,827,545 253,837,409 GRMZM2G153268 limtf6 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 23,758,072 23,759,626 GRMZM2G175761 limtf7 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 134,641,615 134,643,267 GRMZM2G134752 limtf8 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 147,679,277 147,680,759 GRMZM2G170034 limtf9 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 188,946,269 188,947,853 GRMZM2G448607 lip15 Chr6 24,280,540 24,281,904 GRMZM2G181362 lkrsdh1 Classical Gene Chr4 175,769,672 175,780,762 GRMZM2G339563 lls1 Classical Gene Chr1 10,090,835 10,095,173 GRMZM2G339563 lls1 Chr1 10,090,835 10,095,173 GRMZM2G169089 ln1 allelism with dgat1 (Classical Gene from: EU039830) Chr6 105,027,581 105,034,465 GRMZM2G109560 lon1 Chr7 143,360,732 143,369,569 GRMZM2G113056 lon2 Chr7 174,539,360 174,548,995 GRMZM2G072886 lop1 Classical Gene & from: L14271 Chr9 117,765,965 117,767,293 GRMZM2G156861 lox1 Classical Gene Chr3 168,738,873 168,882,335 GRMZM2G015419 lox10 Christensen et al., 2015 Chr4 234,164,919 234,168,681 GRMZM2G009479 lox11 from: DQ335769 Chr5 123,239,668 123,243,697 GRMZM2G106748 lox12 from: DQ335770 Chr3 93,841,905 93,845,764 GRMZM2G156861 lox2 from: DQ335761 Chr3 168,738,873 168,882,335 GRMZM2G109130 lox3 Classical Gene Chr1 264,266,381 264,271,190 GRMZM2G109056 lox4 from: DQ335762 Chr1 264,275,083 264,291,510 GRMZM2G102760 lox5 from: DQ335763 Chr5 12,285,656 12,290,564 GRMZM2G040095 lox6 from: DQ335764 Chr2 4,192,152 4,196,263 GRMZM2G070092 lox7 from: DQ335765 Chr10 120,237,308 120,241,527 GRMZM2G017616 lox9 from Cell Genomics project (10-2013) Chr1 16,573,827 16,580,722 GRMZM2G155242 lpa1 Classical Gene Chr1 25,282,951 25,287,161 GRMZM2G155242 lpa1 Chr1 25,282,951 25,287,161 GRMZM2G456626 lpa2 Classical Gene Chr1 101,838,959 101,841,220 GRMZM2G456626 lpa2 Chr1 101,838,959 101,841,220 GRMZM2G361593 lpa3 from AY772410 Chr1 273,963,482 273,967,146 GRMZM5G858417 lpe1 Belcher et al., 2015 Chr1 263,063,356 263,068,441 GRMZM2G064750 lrk1 Chr8 9,630,289 9,634,061 GRMZM2G077752 lrp1 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 157,286,610 157,288,482 AC232238.2_FG004 lrs1 from: AY180107 Chr8 166,341,735 166,349,613 GRMZM2G153393 ltk1 Chr1 17,640,006 17,655,596 GRMZM2G330907 ltk2 Chr9 150,263,840 150,275,563 GRMZM2G320373 ltp1 Forestan et al., 2016 Chr6 162,859,289 162,860,116 GRMZM2G361398 lug1 Li et al., 2016 Chr3 224,206,634 224,220,693 GRMZM2G079013 lug2 Li et al., 2016 Chr5 215,387,951 215,401,364 GRMZM2G036169 lug3 Li et al., 2016 Chr1 300,351,265 300,364,771 GRMZM2G097640 lug4 Li et al., 2016 Chr1 233,885,155 233,892,825 GRMZM2G037683 lug5 Chr3 58,295,849 58,307,713 GRMZM2G149708 lug6 Li et al., 2016 Chr2 105,360,159 105,380,776 GRMZM2G111247 lug7 Li et al., 2016 Chr4 36,237,183 36,244,148 GRMZM2G061186 lug8 Li et al., 2016 Chr6 8,382,834 8,403,391 GRMZM2G027059 lw1 Based on data for zb7 from Lu et al. 2012 Chr1 273,003,521 273,007,187 GRMZM2G012966 lyce1 Classical Gene Chr8 138,416,903 138,424,121 GRMZM2G012966 lyce1 Transcript 03 seems to be the correct one for lyce1. Transcript 01 appears to be associated with some other gene product. Chr8 138,416,903 138,424,121 AC195147.3_FG001 mab1 Juranic et al., 2012 Chr7 168,147,615 168,148,658 GRMZM2G154437 mab10 Juranic et al., 2012 Chr2 273,517 274,882 GRMZM2G077428 mab11 Juranic et al., 2012 Chr1 246,318,002 246,319,761 GRMZM2G181276 mab12 Juranic et al., 2012 Chr1 262,061,380 262,063,351 GRMZM2G027688 mab13 Juranic et al., 2012 Chr1 239,162,396 239,163,906 GRMZM2G052985 mab14 Juranic et al., 2012 Chr2 235,827,342 235,833,741 GRMZM2G148213 mab15 Juranic et al., 2012 Chr7 170,591,410 170,601,470 GRMZM2G172210 mab16 Juranic et al., 2012 Chr2 215,193,244 215,198,622 GRMZM2G166049 mab17 Juranic et al., 2012 Chr5 4,571,239 4,574,942 GRMZM2G060765 mab18 Juranic et al., 2012 Chr1 286,737,004 286,741,315 GRMZM2G074323 mab19 Juranic et al. 2012 Chr7 8,066,461 8,071,872 GRMZM2G404188 mab2 Juranic et al., 2012 Chr1 191,709,343 191,710,638 GRMZM2G009724 mab20 Juranic et al., 2012 Chr9 110,588,223 110,590,058 GRMZM2G109738 mab21 Juranic et al., 2012 Chr7 32,747,039 32,748,599 GRMZM2G046238 mab22 Juranic et al., 2012 Chr10 17,890,884 17,892,278 GRMZM2G143782 mab23 Juranic et al. 2012 Chr6 93,484,977 93,486,919 GRMZM2G103251 mab24 Juranic et al., 2012 Chr6 93,500,453 93,502,316 GRMZM2G088086 mab25 Juranic et al., 2012 Chr6 93,605,547 93,607,608 GRMZM2G161610 mab26 Juranic et al., 2012 Chr6 93,653,946 93,656,228 GRMZM2G161569 mab27 Juranic et al., 2012 Chr10 66,779,201 66,780,619 GRMZM2G041963 mab28 Juranic et al., 2012 Chr10 66,889,695 66,890,958 GRMZM2G077951 mab29 Juranic et al., 2012 Chr10 94,602,802 94,605,162 GRMZM2G337139 mab3 Juranic et al., 2012 Chr1 191,652,759 191,653,770 GRMZM2G319215 mab30 Juranic et al., 2012 Chr1 252,199,381 252,201,244 Zm00008a006240 mab31 PH207 chr2 7,994,778 7,995,320 GRMZM2G081441 mab4 Juranic et al., 2012 Chr4 42,393,046 42,394,177 GRMZM2G372171 mab5 Juranic et al., 2012 Chr4 42,424,938 42,426,486 GRMZM2G125162 mab6 Juranic et al., 2012 Chr4 42,454,238 42,456,109 GRMZM2G110531 mab7 Juranic et al., 2012 Chr1 240,647,475 240,649,230 GRMZM2G418031 mab8 Juranic et al., 2012 Chr5 33,629,741 33,631,155 GRMZM2G574887 mab9 Juranic et al., 2012 Chr4 5,470,074 5,471,217 GRMZM2G027522 mac1 Chr10 14,913,865 14,916,717 GRMZM2G171365 mads1 Classical Gene Chr9 154,082,657 154,102,449 GRMZM2G472100 mads13 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 21,134,716 21,135,537 GRMZM2G099522 mads14 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 26,671,505 26,681,206 GRMZM2G553379 mads15 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 6,993,294 7,011,505 GRMZM2G337892 mads17 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 207,704,174 207,705,556 GRMZM5G805387 mads18 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 102,542,053 102,545,720 GRMZM2G316366 mads19 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 177,268,178 177,269,968 GRMZM2G137387 mads20 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 217,863,477 217,870,145 AC233912.1_FG001 mads21 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 19,993,628 19,995,763 GRMZM2G052045 mads22 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 214,460,902 214,461,626 GRMZM2G099408 mads25 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 6,442,913 6,443,786 GRMZM2G044408 mads26 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 204,799,296 204,799,985 GRMZM2G135018 mads27 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 33,471,001 33,472,629 GRMZM2G128953 mads28 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 138,090,540 138,096,148 GRMZM2G072582 mads3 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 2,065,444 2,076,981 GRMZM2G069370 mads30 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 119,044,582 119,046,541 GRMZM2G105387 mads32 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 38,790,111 38,793,001 GRMZM2G459864 mads33 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 69,143,279 69,144,043 GRMZM2G137510 mads34 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 17,785,901 17,791,457 GRMZM2G079727 mads36 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 201,371,185 201,375,806 GRMZM2G334225 mads38 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 112,393,075 112,399,500 GRMZM2G055782 mads39 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 126,011,254 126,012,505 GRMZM2G032339 mads4 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 277,218,151 277,298,925 GRMZM2G441115 mads40 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 2,892,328 2,894,627 GRMZM2G018589 mads41 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 170,408,317 170,413,958 GRMZM2G375707 mads42 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 142,010,577 142,012,164 GRMZM2G001139 mads43 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 155,471,127 155,475,291 GRMZM2G130382 mads44 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 85,114,743 85,115,386 GRMZM2G117961 mads45 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 3,237,228 3,240,201 GRMZM2G306610 mads46 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 40,959,292 40,960,647 GRMZM2G099577 mads47 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 70,600,799 70,601,941 GRMZM2G148220 mads48 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 193,288,684 193,293,762 GRMZM2G129034 mads49 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 192,877,045 192,885,419 GRMZM2G038878 mads50 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 108,882,764 108,883,558 GRMZM2G161666 mads51 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 93,656,696 93,658,911 GRMZM2G446426 mads52 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 191,720,338 191,722,587 GRMZM2G035092 mads53 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 168,968,579 168,969,501 GRMZM2G320549 mads54 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 19,792,210 19,807,087 GRMZM2G137289 mads55 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 127,959,457 127,959,975 GRMZM2G026223 mads56 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 4,855,703 4,871,281 GRMZM2G470857 mads57 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 19,431,756 19,432,706 GRMZM2G073357 mads58 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 141,270,744 141,271,664 AC234185.1_FG006 mads59 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 72,172,257 72,173,003 GRMZM2G152415 mads60 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 5,512,084 5,517,672 GRMZM5G878490 mads62 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 234,414,387 234,415,043 GRMZM2G032905 mads63 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 42,386,298 42,388,815 GRMZM5G853066 mads64 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 19,800,106 19,800,942 AC212823.4_FG003 mads65 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 167,376,720 167,382,187 GRMZM5G839969 mads66 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 172,002,654 172,003,517 GRMZM2G147716 mads67 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 164,451,097 164,456,819 GRMZM2G059102 mads68 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 17,964,695 17,986,258 GRMZM2G171650 mads69 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 159,022,119 159,050,063 GRMZM2G097059 mads7 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 136,296,029 136,307,251 GRMZM5G891280 mads70 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 165,738,341 165,739,291 GRMZM2G110582 mads71 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 78,317,642 78,332,274 GRMZM2G046885 mads73 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 209,573,312 209,581,383 GRMZM5G814279 mads74 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 7,111,132 7,121,722 GRMZM2G472096 mads75 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 21,145,677 21,146,564 GRMZM2G070034 mads76 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 125,606,160 125,639,409 GRMZM2G098986 mads77 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 194,482,102 194,488,891 GRMZM2G492156 mads78 Chen et al., 2014 Chr5 177,275,445 177,279,005 GRMZM2G005155 mads9 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 10,371,800 10,374,751 GRMZM2G479245 maf1 Chr9 147,736,551 147,737,374 GRMZM2G102183 mas1 from: Entrez Gene 542252 Chr2 36,945,679 36,948,155 GRMZM5G870170 mate1 from B73_v2 alignment to sequence accession FJ015157 (MS Mar 2013) Chr6 5,869,544 5,874,565 GRMZM2G170128 mate2 from B73_v2 alignment to sequence accession FJ873684 Chr5 20,622,821 20,626,799 GRMZM2G163154 mate3 Guimaraes et al., 2014 Chr1 27,099,590 27,103,458 GRMZM2G080450 mate4 Guimaraes et al., 2014 Chr3 57,084,587 57,091,384 GRMZM5G890665 mate5 Guimaraes et al., 2014 Chr2 153,549,513 153,553,629 GRMZM2G065154 mate6 Guimaraes et al., 2014 Chr5 71,724,077 71,731,917 GRMZM2G471240 matl1 Kelliher et al., 2017 Chr1 68,248,585 68,250,379 GRMZM2G040131 mbd101a from: AY029556 Chr8 106,608,894 106,621,408 GRMZM2G069254 mbd101b from AY029556 (chr 6 hit) Chr6 146,224,513 146,226,056 GRMZM2G476933 mbd105 from: AY029558 Chr3 88,540,265 88,546,003 GRMZM2G022365 mbd106 Chr1 175,322,304 175,330,120 GRMZM2G168269 mbd108 Chr7 134,171,280 134,175,278 GRMZM2G112679 mbd109 from: AF527618 Chr5 16,320,354 16,321,171 GRMZM2G025095 mbd111 Chr2 191,314,651 191,336,825 GRMZM2G126545 mbd113 Chr10 105,058,169 105,069,085 GRMZM2G157470 mbd115 from: AY863051 Chr1 250,122,582 250,128,271 GRMZM2G048411 mbd117 Chr2 188,802,765 188,808,500 GRMZM2G301098 mbd119 Chr1 182,446,629 182,451,070 GRMZM2G119802 mbd123 Chr10 141,516,809 141,520,645 GRMZM2G101480 mbf1 Classical Gene Chr4 24,639,257 24,642,130 GRMZM2G518638 mc1 from alignment of AF371262 | gi 16305110to B73_v2 Chr2 183,992,102 183,992,798 GRMZM2G161299 mcf1 from Zallot et al 2013 Chr5 152,470,618 152,479,871 GRMZM2G420119 mcf2 from Zallot et al 2013 Chr8 139,126,558 139,129,894 GRMZM2G069762 mch2 Chr4 108,571,396 108,574,204 GRMZM2G155281 mde1 from: T14784 Chr2 69,807,566 69,810,549 GRMZM2G154595 mdh2 Classical Gene Chr6 165,831,537 165,836,297 GRMZM2G466833 mdh3 from: EU963335 Chr3 213,978,038 213,986,724 GRMZM2G415359 mdh4 Classical Gene Chr1 231,398,148 231,403,913 GRMZM2G129513 mdh6 from Cell Genomics Project (Oct 2013) Chr1 203,209,824 203,213,983 GRMZM2G122479 me2 from B73_V2 alignment to cDNA U399958 Chr6 139,464,390 139,470,075 GRMZM2G085019 me3 Classical Gene Chr3 7,276,387 7,281,737 GRMZM2G118770 me4 from: AJ224847 Chr8 174,612,565 174,617,106 GRMZM2G122479 me5 from B73_V2 alignment to cDNA U39958 Chr6 139,464,390 139,470,075 GRMZM2G159724 me6 from: BT055901 Chr3 201,756,751 201,761,835 GRMZM5G835542 mecs1 Owens et al., 2014 Chr4 155,857,959 155,859,966 AC209374.4_FG002 mecs2 Owens et al., 2014 Chr5 196,331,063 196,332,805 GRMZM2G354335 meg1 Classical Gene Chr7 13,073,446 13,074,744 GRMZM2G086827 meg10 Xiong et al., 2014 Chr7 12,673,702 12,674,015 GRMZM2G181051 meg11 Xiong et al., 2014 Chr7 12,626,477 12,627,199 GRMZM2G175896 meg12 Xiong et al., 2014 Chr7 12,531,786 12,532,621 GRMZM2G175912 meg13 Xiong et al., 2014 Chr7 12,484,473 12,485,342 GRMZM2G145466 meg14 Xiong et al., 2014 Chr7 13,178,054 13,178,841 GRMZM2G137959 meg15 Xiong et al., 2014 Chr7 12,591,109 12,591,978 GRMZM2G088896 meg2 from: BT068231 Chr7 12,676,389 12,677,577 GRMZM2G344323 meg3 from: Entrez Gene 100101508 Chr7 12,776,201 12,779,156 GRMZM5G896560 meg4 from: AY536124 Chr7 39,888,296 39,889,211 GRMZM2G094054 meg6 Xiong et al., 2014 Chr7 12,709,254 12,710,092 GRMZM2G116212 meg7 Xiong et al., 2014 Chr7 13,003,435 13,004,149 GRMZM2G123153 meg8 Xiong et al., 2014 Chr7 12,859,255 12,859,461 GRMZM2G502035 meg9 Xiong et al., 2014 Chr7 12,752,035 12,752,664 GRMZM2G167856 mek1 from sequence U83625 Chr3 201,966,295 201,973,589 GRMZM2G333916 met1 Classical Gene Chr7 11,133,095 11,139,492 GRMZM2G333916 met1 from: Li et al., 2014; ; aligns best with reference sequence AF229183 Chr7 11,133,095 11,139,492 GRMZM2G025592 met2 From sequence homology to Genbank accession NM_001111508.1 Chr10 141,612,636 141,620,390 GRMZM2G092497 met3 was gene model GRMZM2G092545 on RefGen_v1 corresponds to the gene model GRMZM2G092497 on RefGen_v2 Chr9 154,729,337 154,755,677 GRMZM2G157589 met4 Entrez Gene Chr8 142,201,711 142,206,667 GRMZM2G005310 met5 from: AY027539 Chr2 10,343,925 10,353,440 GRMZM2G065599 met6 Li et al., 2014 Chr8 129,490,869 129,493,053 GRMZM2G137366 met7 Chr1 2,930,055 2,935,014 GRMZM2G334041 met8 from: AY093415, AF063403 & Li et al., 2014 Chr7 11,151,804 11,157,815 GRMZM2G157820 mez1 Classical Gene Chr6 79,622,840 79,633,054 GRMZM5G875502 mez2 Chr9 135,509,551 135,524,285 GRMZM2G043484 mez3 from Entrez Gene 541955 Chr1 49,403,087 49,413,070 EF517601.1_FG016 mfs18 Chr3 34,681,198 34,681,584 GRMZM2G161310 mfsd1 Chr3 45,563,077 45,577,326 GRMZM5G877788 mfsd2 from: AY104766 Chr4 186,656,010 186,660,015 GRMZM2G317406 mgs1 Classical Gene Chr10 111,861,870 111,862,808 GRMZM2G080056 mgs2 from Entrez Gene 542245 Chr4 231,421,874 231,423,870 GRMZM2G323418 mgs3 from: BT055324 Chr9 20,163,896 20,165,966 GRMZM2G108477 mgt1 Li et al., 2016 Chr9 104,353,895 104,357,808 GRMZM2G018706 mgt10 Li et al., 2016 Chr1 8,348,905 8,351,557 GRMZM2G054632 mgt11 Li et al., 2016 Chr10 116,913,274 116,917,658 GRMZM2G420436 mgt12 Li et al., 2016 Chr1 260,979,921 260,988,130 GRMZM2G170326 mgt2 Li et al., 2016 Chr6 95,771,854 95,778,367 GRMZM2G064467 mgt3 Li et al., 2016 Chr2 32,222,808 32,227,738 GRMZM2G145794 mgt4 Li et al., 2016 Chr9 126,705,574 126,709,100 GRMZM2G159295 mgt5 Li et al., 2016 Chr1 275,052,382 275,058,949 GRMZM2G453832 mgt6 Li et al., 2016 Chr1 85,998,310 86,001,537 GRMZM2G458879 mgt7 Li et al., 2016 Chr2 51,802,797 51,804,523 GRMZM2G065971 mgt8 Li et al., 2016 Chr8 162,836,382 162,842,987 GRMZM2G139822 mgt9 Li et al., 2016 Chr3 164,927,197 164,941,379 GRMZM2G144821 mha1 from: U09989 Chr2 233,155,669 233,160,713 GRMZM2G019404 mha2 Classical Gene Chr2 4,305,357 4,312,971 GRMZM2G104325 mha3 originally associated with mha1, but that is on chr 2 Chr7 14,468,797 14,474,919 GRMZM2G006894 mha4 Chr10 145,614,824 145,621,943 GRMZM2G150276 mir1 Classical Gene Chr6 89,072,247 89,074,183 GRMZM2G150256 mir2 from: BT040644 Chr6 89,066,267 89,071,191 GRMZM2G166281 mir3 alignment to sequence AF019147.1 GI:2425065 Chr2 5,275,102 5,279,397 GRMZM2G090087 mis1 Chr6 161,650,053 161,657,588 GRMZM2G173660 mis12a from: FJ971487 Chr10 147,960,260 147,963,853 GRMZM2G049495 mis12b from: FJ971488; GRMZM2G127481 on RefGen_v1 corresponds to the gene model GRMZM2G049495 on RefGen_v2 Chr2 1,049,355 1,141,492 GRMZM5G867568 mkk3 from JN972438.1 on B73_V2 Chr3 111,094,841 111,094,990 GRMZM5G878379 mkk4 from: GU942956 Chr5 212,702,420 212,703,869 GRMZM2G180555 mkkk10 from Kong et al 2013 Chr9 141,628,047 141,638,073 GRMZM2G066120 mkkk11 from Kong et al 2013 Chr1 37,470,728 37,476,121 GRMZM2G305066 mkkk18 from Kong et al 2013 Chr8 152,510,200 152,511,639 GRMZM2G089159 mkkk27 from Kong et al 2013 Chr2 207,080,135 207,083,546 GRMZM2G045366 mkkk47 from Kong et al 2013 Chr3 197,586,815 197,591,360 GRMZM2G019434 mkkk51 from Kong et al 2013 Chr1 171,553,382 171,558,256 GRMZM2G088299 mkkk55 from Kong et al 2013 Chr3 215,295,086 215,300,436 GRMZM2G152889 mkkk63 from Kong et al 2013 Chr3 142,725,252 142,734,848 GRMZM2G096475 mlg3 Classical Gene Chr6 162,162,303 162,163,681 GRMZM2G032219 mlo1 from: Entrez Gene 542672 Chr1 6,227,483 6,231,125 GRMZM2G040441 mlo2 from: Entrez Gene 542061 Chr1 84,547,891 84,553,701 GRMZM2G031331 mlo3 from: Entrez Gene 542508 Chr2 47,067,541 47,072,637 GRMZM2G089259 mlo4 Chr4 207,435,849 207,441,283 GRMZM2G471142 mlo5 from: BT039054 Chr3 169,916,619 169,920,590 GRMZM2G325653 mlo6 from: Entrez Gene 542064 Chr5 64,702,557 64,709,182 GRMZM2G416887 mlo7 from: Entrez Gene 542673 Chr9 103,186,013 103,204,159 GRMZM5G881803 mlo8 from: Entrez Gene 542065 Chr6 147,620,043 147,639,499 GRMZM2G051974 mlo9 from: BT040335 Chr2 1,273,216 1,278,753 GRMZM2G087918 mmp93 Chr1 10,220,690 10,229,909 GRMZM2G119689 mn1 Classical Gene Chr2 57,435,843 57,439,124 GRMZM2G042443 mop1 Classical Gene Chr2 41,131,324 41,136,928 GRMZM2G042443 mop1 Chr2 41,131,324 41,136,928 GRMZM2G053987 mpk1 from AB016801 Chr9 138,684,018 138,689,891 GRMZM2G062914 mpk14 alignment of DQ295030 and AY105935 to B73_v2 Chr5 79,898,949 79,904,417 GRMZM2G020216 mpk2 from AB016802 Chr9 18,879,527 18,885,415 GRMZM2G017792 mpk3 B73_v2 alignment to EU130900 Chr1 43,690,126 43,693,022 GRMZM2G089484 mpk6 from BT060960 Chr10 88,695,003 88,700,854 GRMZM2G002100 mpk7 from BT040404 Chr6 74,762,186 74,767,526 GRMZM2G152827 mpt1 Chr5 210,195,424 210,200,092 GRMZM2G106056 mre11a from: ABQ59303 (Sidhu et al., 2017) Chr2 6,993,096 7,000,975 GRMZM2G309109 mre11b from Cell Genomics Project (Oct 2013) Chr4 29,935,686 29,941,454 GRMZM2G111306 mrp1 Classical Gene Chr8 127,960,823 127,962,081 GRMZM2G113203 mrpa1 from: Entrez Gene 100037760 Chr9 58,021,949 58,028,182 GRMZM5G832772 mrpa2 Chr7 123,394,542 123,423,972 GRMZM2G111903 mrpa3 Classical Gene Chr9 17,746,515 17,758,407 GRMZM5G820122 mrpa4 from: CS229842 Chr1 9,298,049 9,301,828 GRMZM2G142870 mrpa6 from: EU950350 Chr8 45,267,687 45,282,726 GRMZM5G830695 mrpa7 Chr3 11,403,408 11,407,172 GRMZM2G139160 mrpi1 from: FM252125 Chr8 171,358,270 171,363,973 GRMZM2G105224 mrpi2 Chr3 190,121,699 190,124,115 GRMZM5G830329 ms10 Somaratne et al.,2016 Chr10 84,622,439 84,624,344 GRMZM2G442791 ms22 from homology to GN051196 Chr7 5,333,364 5,334,245 GRMZM2G021276 ms23 Nan et al., 2016; assigned by the Grassius project, (Yilmaz et al 2009) Chr8 95,823 98,367 GRMZM2G091822 ms26 Classical Gene Chr1 14,505,716 14,508,042 GRMZM2G163233 ms32 Moon et al., 2013 Chr2 205,125,283 205,135,718 AC225127.3_FG003 ms44 Fox et al., 2017 Chr4 195,238,767 195,239,581 GRMZM2G307906 ms45 Classical Gene Chr9 141,198,898 141,203,399 GRMZM5G890224 ms7 Zhang et al., 2017 Chr7 123,885,131 123,886,963 Zm00001d020680 ms7 v4 Chr7 127,860,533 127,863,145 GRMZM2G119265 ms8 Wang et al., 2013 Chr8 164,959,333 164,961,811 GRMZM2G308034 ms9 from: sequence in Albertsen et al., 2016 Chr1 45,942,719 45,945,140 GRMZM2G057450 msf1 Chr4 2,116,635 2,122,723 GRMZM2G036217 msh1 Chr4 52,923,800 52,927,833 GRMZM2G089308 msrb2 Olukolu, BA et al. 2016 Chr8 107,317,423 107,322,839 GRMZM2G110185 mss1 from: BT042297 Chr5 212,423,808 212,427,681 GRMZM2G135739 mstr1 from: AY683004 Chr7 1,232,553 1,236,835 GRMZM2G141034 mstr2 from: AY683005 Chr4 29,873,533 29,875,971 GRMZM2G034061 mstr4 Chr9 115,519,260 115,524,432 GRMZM2G090422 mta1 Classical Gene Chr1 277,805,915 277,807,951 GRMZM2G168665 mterf1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 62,678,623 62,679,874 GRMZM2G177019 mterf10 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 125,764,251 125,766,015 GRMZM2G023257 mterf11 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 164,545,324 164,547,139 GRMZM2G113181 mterf12 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 40,732,037 40,733,517 GRMZM2G312806 mterf13 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 125,520,897 125,522,276 GRMZM2G000610 mterf14 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 175,942,990 175,945,922 GRMZM2G119921 mterf15 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 97,211,503 97,213,224 GRMZM2G395850 mterf16 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 160,553,137 160,554,858 GRMZM2G024550 mterf17 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 181,938,089 181,940,862 GRMZM2G017355 mterf18 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 207,946,920 207,948,448 GRMZM2G017429 mterf19 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 207,948,915 207,950,416 GRMZM2G061542 mterf2 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 191,096,212 191,098,816 GRMZM2G158854 mterf20 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 208,026,456 208,027,062 GRMZM2G161146 mterf21 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 208,983,535 208,985,153 GRMZM2G012999 mterf22 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 145,978,354 145,980,232 GRMZM2G426154 mterf23 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 4,125,505 4,128,341 GRMZM2G175930 mterf24 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 4,166,250 4,167,474 GRMZM2G142150 mterf25 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 145,340,020 145,344,782 GRMZM2G062910 mterf26 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 149,471,798 149,473,953 GRMZM2G325350 mterf27 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 107,021,009 107,022,559 GRMZM2G068462 mterf29 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 149,784,489 149,785,027 GRMZM2G034217 mterf3 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 247,924,596 247,928,127 GRMZM2G157716 mterf30 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 128,351,184 128,353,531 GRMZM2G054517 mterf32 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 293,596,590 293,597,275 GRMZM2G044832 mterf33 from protein sequence NP_001152154.1 Chr4 72,413,770 72,415,391 GRMZM2G029933 mterf4 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 107,478,416 107,481,820 GRMZM2G159766 mterf5 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 293,884,036 293,885,697 GRMZM2G170137 mterf6 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 296,849,440 296,855,068 GRMZM2G087679 mterf7 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 200,677,205 200,677,752 GRMZM2G060114 mterf8 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 206,785,654 206,788,258 GRMZM2G130773 mterf9 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 208,493,066 208,496,996 GRMZM2G164229 mtl1 from: X82186 - low confidence overlaps with AC188003.3_FG012, GRMZM2G164225, AC188003.3_FG011, GRMZM2G415161, and GRMZM2G308369 Chr4 1,078,840 1,080,800 GRMZM2G402564 mtl2 from: Z34469 Chr1 84,824,229 84,824,959 GRMZM2G099340 mtl3 Chr3 17,614,009 17,614,990 GRMZM2G009070 murE1 from: AFW87925 Chr9 117,602,450 117,606,164 GRMZM2G056075 mus1 Chr7 162,805,707 162,815,421 GRMZM2G110212 mus2 from: AJ238787 Chr3 9,425,062 9,436,121 GRMZM2G421541 mus3 Chr7 110,073,686 110,083,762 GRMZM2G082264 mwp1 Classical Gene Chr7 107,261,176 107,267,803 GRMZM2G102790 myb1 from AF474115 Chr6 57,696,052 57,697,795 GRMZM2G395672 myb10 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 152,307,135 152,308,035 GRMZM2G143046 myb100 Chr1 148,636,099 148,638,077 GRMZM2G425427 myb101 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 85,332,939 85,334,512 GRMZM2G392823 myb102 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 24,562,822 24,564,246 GRMZM2G111045 myb103 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 147,942,670 147,945,039 GRMZM2G105137 myb104 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 20,746,096 20,747,513 GRMZM2G031323 myb105 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 157,205,480 157,207,019 GRMZM2G048910 myb106 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 118,137,380 118,139,235 GRMZM2G172575 myb107 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 2,635,968 2,636,971 GRMZM2G011422 myb108 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 68,821,398 68,822,736 GRMZM2G052606 myb109 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 28,608,735 28,611,473 GRMZM2G000818 myb11 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 176,175,338 176,183,379 GRMZM2G176327 myb110 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 218,127,126 218,128,844 GRMZM2G115859 myb111 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 183,375,901 183,377,379 GRMZM5G803308 myb112 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 97,396,868 97,398,308 GRMZM2G090837 myb113 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 164,905,509 164,906,823 GRMZM2G151205 myb114 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 155,174,836 155,176,075 GRMZM2G423833 myb115 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 89,300,616 89,303,600 GRMZM2G343068 myb116 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 91,094,278 91,096,039 GRMZM2G470307 myb117 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 2,100,964 2,106,267 GRMZM2G160840 myb118 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 127,632,800 127,634,389 AC213884.3_FG002 myb119 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 140,735,955 140,737,064 GRMZM2G104789 myb12 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 5,492,315 5,496,291 GRMZM2G054111 myb120 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 9,210,655 9,212,108 GRMZM2G147346 myb121 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 231,339,380 231,341,787 GRMZM2G416652 myb122 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 91,044,353 91,053,527 GRMZM2G172487 myb123 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 2,629,931 2,630,888 GRMZM2G003406 myb124 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 153,001,174 153,002,887 GRMZM2G079123 myb125 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 213,964,635 213,966,254 GRMZM2G001223 myb126 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 177,037,863 177,039,897 GRMZM2G369799 myb127 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 143,516,968 143,518,615 GRMZM2G017520 myb128 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 48,494,886 48,497,275 GRMZM2G070523 myb129 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 20,219,035 20,221,972 GRMZM2G038722 myb13 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 13,306,159 13,307,935 GRMZM2G069325 myb130 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 163,187,174 163,188,702 GRMZM2G001875 myb131 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 6,740,166 6,741,503 AC206901.3_FG005 myb132 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 130,744,061 130,745,625 GRMZM2G149958 myb133 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 1,678,831 1,682,752 GRMZM2G001824 myb134 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 85,407,063 85,408,480 GRMZM2G460869 myb136 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 43,581,101 43,582,165 GRMZM2G162709 myb137 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 23,685,016 23,686,756 GRMZM2G139688 myb138 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 187,060,539 187,064,561 GRMZM2G087955 myb139 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 164,459,324 164,461,196 GRMZM2G172327 myb14 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 150,123,692 150,125,127 GRMZM2G117244 myb140 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 118,942,837 118,944,366 GRMZM2G166337 myb141 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 205,695,705 205,697,501 GRMZM2G055158 myb142 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 166,940,293 166,941,682 GRMZM2G043792 myb144 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 140,905,500 140,906,629 GRMZM2G158700 myb145 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 52,310,607 52,311,832 GRMZM2G106558 myb146 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 215,390,233 215,391,851 GRMZM2G330475 myb147 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 129,632,727 129,634,070 GRMZM2G044824 myb148 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 26,643,904 26,645,305 GRMZM2G127490 myb149 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 87,801,492 87,804,648 GRMZM2G081919 myb15 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 180,868,369 180,880,014 GRMZM2G161512 myb150 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 41,714,515 41,716,637 GRMZM2G167829 myb151 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 202,003,124 202,004,769 GRMZM2G104551 myb152 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 143,239,537 143,250,321 GRMZM2G050550 myb153 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 51,486,945 51,489,455 GRMZM2G022686 myb154 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 136,428,923 136,433,765 GRMZM2G150680 myb155 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 74,619,373 74,623,124 GRMZM2G147698 myb156 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 64,243,765 64,245,594 GRMZM2G073836 myb157 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 135,315,692 135,321,511 GRMZM2G078820 myb158 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 97,484,061 97,485,484 GRMZM2G126566 myb159 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 108,815,110 108,818,213 GRMZM2G015021 myb16 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 175,365,997 175,368,482 GRMZM2G302549 myb160 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 4,156,159 4,161,139 GRMZM2G088189 myb161 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 69,331,089 69,332,668 GRMZM2G045748 myb162 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 112,497,750 112,499,904 GRMZM2G405094 myb163 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 165,425,516 165,426,742 GRMZM2G110135 myb164 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 182,569,440 182,570,779 GRMZM2G089686 myb165 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 152,402,913 152,404,601 GRMZM2G496770 myb166 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 147,813,432 147,816,122 GRMZM2G037650 myb167 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 207,220,915 207,226,619 GRMZM2G138427 myb17 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 216,738,472 216,740,213 GRMZM2G356718 myb18 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 281,831,441 281,837,582 GRMZM5G833253 myb19 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 157,794,216 157,795,479 AC203535.4_FG001 myb2 Classical Gene Chr3 157,551,793 157,560,623 GRMZM2G052377 myb20 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 13,212,794 13,213,981 GRMZM2G305856 myb21 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 34,889,113 34,891,065 GRMZM2G096358 myb22 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 11,486,302 11,488,135 GRMZM2G150841 myb23 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 168,329,433 168,331,529 GRMZM2G006352 myb24 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 150,874,045 150,875,425 GRMZM2G431156 myb25 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 101,285,814 101,286,751 GRMZM2G170049 myb26 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 188,966,583 188,971,226 GRMZM2G064744 myb27 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 227,482,800 227,485,105 GRMZM2G111117 myb28 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 82,918,804 82,920,269 GRMZM2G134279 myb29 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 134,045,064 134,047,281 GRMZM2G099334 myb3 Chr5 167,471,479 167,473,890 GRMZM2G171781 myb30 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 128,605,416 128,608,501 GRMZM2G050305 myb31 Chr2 196,943,580 196,945,201 GRMZM2G160838 myb32 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 173,563,412 173,564,760 GRMZM2G131937 myb33 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 212,948,280 212,949,607 GRMZM2G125522 myb34 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 178,602,360 178,604,208 AC165178.2_FG004 myb35 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 182,073,111 182,074,488 GRMZM2G169316 myb36 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 167,538,578 167,540,715 GRMZM2G455869 myb37 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 10,183,391 10,185,240 GRMZM2G084583 myb38 from Grassius Chr1 206,902,673 206,903,955 GRMZM2G127857 myb39 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 142,662,999 142,664,773 GRMZM2G131442 myb4 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 2,048,276 2,051,646 GRMZM2G051256 myb40 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 54,471,016 54,474,812 GRMZM2G095904 myb41 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 186,464,058 186,465,312 GRMZM2G419239 myb42 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 217,140,381 217,141,824 GRMZM2G083239 myb43 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 43,407,839 43,409,117 GRMZM2G111731 myb44 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 43,359,914 43,361,633 GRMZM2G051793 myb45 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 4,708,398 4,726,962 GRMZM2G088783 myb47 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 204,223,730 204,225,741 GRMZM2G159547 myb48 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 208,398,128 208,399,748 GRMZM2G032655 myb49 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 42,399,734 42,402,189 GRMZM2G097636 myb5 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 139,613,167 139,614,620 GRMZM2G145444 myb50 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 98,692,287 98,694,146 GRMZM5G803355 myb51 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 138,430,393 138,432,531 GRMZM2G098179 myb52 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 119,563,181 119,564,683 GRMZM2G143328 myb53 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 215,930,994 215,932,039 GRMZM2G123202 myb54 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 23,621,911 23,623,663 GRMZM2G130149 myb56 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 150,717,400 150,722,235 GRMZM2G102790 myb57 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 57,696,052 57,697,795 AC217264.3_FG005 myb58 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 246,090,026 246,092,492 GRMZM2G093789 myb59 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 89,403,121 89,416,241 GRMZM2G047626 myb6 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 127,316,146 127,317,795 GRMZM2G312419 myb60 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 2,761,493 2,763,284 GRMZM2G108959 myb61 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 211,371,663 211,373,398 GRMZM2G013581 myb62 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 34,825,413 34,826,773 GRMZM2G017268 myb63 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 197,249,760 197,251,014 GRMZM2G124715 myb64 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 131,979,387 131,980,997 GRMZM2G097638 myb65 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 139,616,209 139,617,701 GRMZM2G169356 myb66 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 108,726,504 108,727,871 GRMZM2G089244 myb67 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 207,043,753 207,046,336 GRMZM2G311059 myb68 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 139,262,188 139,263,199 AC197146.3_FG002 myb69 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 2,469,595 2,470,558 GRMZM2G064630 myb7 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 213,301,143 213,305,674 GRMZM2G139284 myb70 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 213,409,017 213,410,688 GRMZM2G093647 myb71 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 140,863,600 140,864,545 GRMZM2G048295 myb72 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 30,170,679 30,172,939 GRMZM2G121570 myb73 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 252,379,991 252,382,041 GRMZM2G028054 myb74 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 170,725,034 170,728,865 GRMZM2G070849 myb75 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 51,395,397 51,397,668 GRMZM2G143274 myb76 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 16,772,384 16,773,583 GRMZM2G077147 myb77 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 269,707,858 269,709,728 GRMZM2G428555 myb78 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 213,582,734 213,586,180 GRMZM2G056986 myb79 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 167,004,561 167,005,794 GRMZM2G041415 myb8 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 140,151,898 140,153,093 GRMZM5G870592 myb80 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 288,542,157 288,545,680 GRMZM2G020772 myb81 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 19,005,064 19,007,583 GRMZM2G167088 myb82 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 91,085,847 91,092,849 GRMZM2G024468 myb83 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 212,890,592 212,892,164 GRMZM2G173633 myb84 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 124,346,736 124,348,421 GRMZM2G077789 myb85 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 150,884,611 150,885,947 GRMZM2G027697 myb86 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 185,547,753 185,549,361 GRMZM2G004090 myb87 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 91,131,737 91,138,554 GRMZM2G048136 myb88 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 1,269,236 1,270,429 GRMZM2G040924 myb89 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 189,017,104 189,019,282 GRMZM2G081557 myb9 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 139,471,900 139,473,418 GRMZM2G047600 myb90 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 33,141,828 33,143,103 GRMZM2G119693 myb91 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 63,068,162 63,069,647 GRMZM2G325907 myb92 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 81,840,592 81,843,874 GRMZM2G093660 myb93 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 140,832,154 140,833,178 GRMZM2G051528 myb95 from: Entrez Gene 100037755; and assigned by the Grassius project, (Yilmaz et al 2009) Chr8 34,675,104 34,689,130 GRMZM2G322490 myb96 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 40,556,783 40,558,240 GRMZM2G046443 myb98 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 190,346,919 190,348,170 GRMZM2G175232 myb99 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 162,305,213 162,306,663 GRMZM2G477533 mybr10 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 20,943,684 20,945,224 GRMZM5G833032 mybr100 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 196,333,385 196,347,387 GRMZM2G136887 mybr101 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 139,912,821 139,920,531 GRMZM2G129872 mybr102 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 48,011,049 48,012,183 GRMZM2G022499 mybr103 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 188,491,207 188,494,857 GRMZM2G023557 mybr104 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 299,468,335 299,469,321 GRMZM2G471039 mybr105 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 44,822,275 44,823,668 GRMZM2G129817 mybr106 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 7,149,223 7,161,457 GRMZM2G456960 mybr107 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 1,837,921 1,839,249 GRMZM2G304840 mybr108 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 149,181,160 149,185,462 GRMZM2G433450 mybr109 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 62,424,724 62,426,967 GRMZM2G071468 mybr11 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 192,547,214 192,555,085 GRMZM2G443202 mybr110 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 221,293,909 221,300,124 GRMZM2G181030 mybr111 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 134,854,638 134,857,160 GRMZM2G370896 mybr112 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 96,553,982 96,582,581 GRMZM2G001106 mybr113 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 132,817,600 132,819,290 GRMZM2G119261 mybr114 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 113,806,626 113,816,795 GRMZM2G049378 mybr115 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 148,179,996 148,182,680 GRMZM5G847287 mybr116 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 194,297,473 194,298,570 GRMZM2G112263 mybr12 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 48,154,654 48,155,041 GRMZM2G091201 mybr13 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 149,547,176 149,548,435 GRMZM2G340756 mybr14 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 139,757,841 139,764,438 GRMZM2G048403 mybr15 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 210,149,799 210,173,485 GRMZM2G382029 mybr16 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 8,495,835 8,497,325 GRMZM2G071977 mybr17 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 223,767,189 223,769,272 GRMZM2G176568 mybr18 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 13,792,506 13,793,319 GRMZM2G402156 mybr19 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 15,055,667 15,056,797 GRMZM2G400489 mybr2 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 824,954 835,548 GRMZM2G421256 mybr20 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 14,726,120 14,728,827 GRMZM2G079458 mybr21 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 13,801,696 13,804,475 GRMZM2G468479 mybr22 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 6,089,921 6,097,881 GRMZM2G075064 mybr23 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 102,481,776 102,484,118 GRMZM2G049695 mybr24 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 20,520,277 20,522,116 GRMZM5G848185 mybr25 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 212,643,601 212,645,908 GRMZM2G112764 mybr26 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 85,321,554 85,325,088 GRMZM2G119133 mybr28 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 171,749,221 171,756,808 AC199820.4_FG006 mybr29 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 210,594,735 210,595,406 GRMZM2G002128 mybr3 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 149,021,224 149,023,568 GRMZM2G169991 mybr30 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 32,103,896 32,105,382 GRMZM2G034110 mybr31 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 115,514,419 115,517,835 GRMZM2G088524 mybr32 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 94,375,921 94,377,959 GRMZM2G422083 mybr33 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 88,729,270 88,730,919 GRMZM2G101806 mybr34 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 24,642,311 24,643,851 GRMZM2G065829 mybr35 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 141,446,174 141,448,103 GRMZM2G014534 mybr36 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 13,349,180 13,350,397 GRMZM2G027914 mybr37 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 176,478,861 176,480,372 GRMZM2G059167 mybr38 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 115,304,028 115,319,510 GRMZM2G451116 mybr39 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 216,327,065 216,328,448 GRMZM2G032180 mybr4 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 152,273,149 152,273,832 GRMZM2G088005 mybr40 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 19,456,504 19,458,038 GRMZM2G150260 mybr41 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 216,312,171 216,314,107 GRMZM2G369993 mybr42 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 155,061,845 155,063,380 GRMZM5G813892 mybr43 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 89,448,263 89,451,835 GRMZM2G016020 mybr44 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 48,014,364 48,015,108 GRMZM2G415077 mybr45 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 300,823,403 300,824,061 GRMZM2G005112 mybr46 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 179,262,685 179,263,682 GRMZM2G117497 mybr47 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 165,301,952 165,303,494 GRMZM2G175265 mybr48 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 78,356,797 78,358,456 GRMZM2G416708 mybr49 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 41,295,336 41,296,872 GRMZM2G401809 mybr5 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 211,646,121 211,647,607 GRMZM2G337011 mybr50 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 9,316,108 9,317,023 GRMZM2G379167 mybr51 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 215,521,132 215,523,527 GRMZM2G029850 mybr52 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 197,657,418 197,660,109 GRMZM2G047038 mybr53 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 270,191,276 270,202,265 GRMZM2G152319 mybr54 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 143,795,886 143,800,919 GRMZM2G143640 mybr55 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 166,202,168 166,203,590 GRMZM2G398758 mybr56 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 235,101,440 235,102,975 GRMZM2G139174 mybr57 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 166,438,508 166,439,034 GRMZM2G170322 mybr58 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 156,546,886 156,549,720 GRMZM2G085427 mybr59 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 32,374,231 32,382,033 GRMZM2G087817 mybr6 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 221,663,066 221,667,898 GRMZM5G845296 mybr60 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 113,866,855 113,869,756 GRMZM2G139760 mybr61 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 208,030,163 208,035,544 GRMZM2G531738 mybr62 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 135,326,257 135,335,990 GRMZM2G447745 mybr63 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 26,908,013 26,915,169 GRMZM2G118693 mybr64 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 155,860,243 155,865,096 GRMZM2G546369 mybr65 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 144,803,533 144,808,264 GRMZM2G049194 mybr67 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 211,753,884 211,765,564 GRMZM2G410083 mybr68 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 129,607,133 129,610,574 GRMZM2G135052 mybr69 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 27,185,077 27,191,507 GRMZM2G071648 mybr70 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 100,111,985 100,113,471 GRMZM2G448104 mybr71 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 142,938,806 142,965,743 GRMZM2G700011 mybr72 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 137,511,121 137,512,076 GRMZM2G147152 mybr73 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 126,546,425 126,548,480 GRMZM2G073826 mybr74 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 135,342,824 135,344,111 GRMZM2G023667 mybr75 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 153,685,211 153,695,652 GRMZM2G301642 mybr76 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 45,267,830 45,269,717 GRMZM2G057408 mybr77 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 93,259,854 93,265,695 AC204212.4_FG001 mybr78 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 201,176,614 201,176,904 GRMZM2G177760 mybr8 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 62,405,348 62,407,503 GRMZM2G163291 mybr80 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 14,476,929 14,481,586 GRMZM2G121111 mybr81 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 88,764,345 88,765,689 GRMZM2G103783 mybr82 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 133,402,091 133,405,607 GRMZM2G098884 mybr83 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 30,961,505 30,976,774 GRMZM2G108892 mybr84 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 81,701,345 81,729,386 GRMZM2G089406 mybr85 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 130,868,798 130,875,685 GRMZM2G170148 mybr86 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 110,859,050 110,870,308 GRMZM2G158117 mybr87 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 70,808,377 70,809,767 GRMZM2G064328 mybr88 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 234,391,361 234,395,800 GRMZM2G121753 mybr89 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 211,692,320 211,693,746 GRMZM2G030403 mybr9 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 89,125,351 89,126,605 GRMZM2G046438 mybr90 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 31,921,424 31,926,755 GRMZM2G111990 mybr91 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 48,136,700 48,137,829 GRMZM2G157306 mybr92 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 34,498,413 34,504,954 GRMZM2G135410 mybr93 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 37,825,696 37,830,335 GRMZM2G328814 mybr94 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 175,758,339 175,759,719 GRMZM2G115070 mybr95 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 300,879,227 300,880,127 GRMZM2G145041 mybr96 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 64,145,458 64,148,638 GRMZM2G057955 mybr97 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 218,099,741 218,101,238 GRMZM2G111906 mybr98 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 82,660,395 82,663,470 GRMZM2G024054 mybr99 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 21,005,810 21,011,591 GRMZM2G034110 mybst1 Chr9 115,514,419 115,517,835 GRMZM2G001930 myc7 assigned by the Grassius project, (Yilmaz et al 2009) to bhlh149 Chr1 98,363,081 98,365,897 AC155377.1_FG001 myo1 from: AF104924 Chr3 220,967,145 220,986,200 GRMZM2G034362 myo2 Chr5 215,754,092 215,764,902 GRMZM2G332687 myo2 Chr5 215,751,740 215,753,860 GRMZM2G113202 myo3 from: AF147738 Chr1 229,251,332 229,267,181 GRMZM2G449033 na1 based on GenBank NM_001156344 Chr3 179,041,147 179,042,863 GRMZM2G057000 na2 Best et al., 2016 Chr5 65,138,723 65,143,833 GRMZM2G096958 naat1 Chr4 220,114,792 220,118,307 GRMZM2G015605 nac1 Classical Gene Chr10 87,283,919 87,284,844 GRMZM2G134717 nactf1 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 149,342,434 149,343,235 GRMZM2G315140 nactf10 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 189,452,831 189,457,211 AC211478.3_FG004 nactf100 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 141,524,464 141,524,928 GRMZM2G104078 nactf101 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 130,546,212 130,550,063 GRMZM5G894234 nactf102 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 146,509,128 146,512,839 AC212859.3_FG008 nactf103 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 26,370,683 26,372,492 GRMZM5G857701 nactf104 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 214,998,412 215,000,055 GRMZM2G123246 nactf105 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 38,574,124 38,577,183 GRMZM2G031120 nactf106 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 254,134,957 254,136,440 GRMZM2G172264 nactf107 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 98,794,488 98,795,642 GRMZM2G114850 nactf108 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 122,090,412 122,094,741 GRMZM2G014653 nactf109 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 170,863,580 170,866,035 GRMZM2G031001 nactf11 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 53,419,144 53,421,347 GRMZM2G167018 nactf110 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 61,009,621 61,012,269 GRMZM2G450445 nactf111 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 38,182,053 38,187,930 GRMZM2G456568 nactf112 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 148,114,978 148,119,765 GRMZM2G063522 nactf113 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 43,445,603 43,449,974 GRMZM2G430522 nactf114 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 188,939,619 188,942,480 GRMZM2G069047 nactf115 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 38,060,800 38,063,263 GRMZM2G041746 nactf116 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 106,419,729 106,421,601 GRMZM2G163914 nactf117 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 28,857,463 28,862,279 GRMZM2G109627 nactf118 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 7,036,425 7,039,141 GRMZM2G393433 nactf119 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 16,291,317 16,293,647 GRMZM2G125777 nactf12 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 50,123,857 50,128,792 GRMZM2G176677 nactf120 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 27,056,209 27,064,181 AC233865.1_FG003 nactf121 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 146,634,161 146,635,852 GRMZM2G430849 nactf122 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 173,556,184 173,558,723 GRMZM2G092465 nactf123 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 4,308,720 4,311,321 GRMZM2G104074 nactf124 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 65,939,491 65,941,420 GRMZM2G123667 nactf125 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 208,153,304 208,156,017 GRMZM2G018436 nactf126 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 150,664,743 150,666,249 GRMZM2G389557 nactf127 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 63,305,824 63,308,265 GRMZM2G078954 nactf129 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 116,856,576 116,860,095 GRMZM2G038073 nactf13 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 180,419,619 180,423,120 GRMZM2G154182 nactf130 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 7,300,179 7,302,179 GRMZM2G178998 nactf131 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 23,327,304 23,330,538 GRMZM2G179885 nactf132 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 158,275,103 158,277,300 GRMZM2G094067 nactf133 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 172,963,066 172,964,225 GRMZM2G163843 nactf134 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 150,104,921 150,106,384 GRMZM2G159094 nactf14 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 111,693,679 111,695,863 GRMZM2G111770 nactf15 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 125,215,781 125,218,953 GRMZM2G166721 nactf16 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 6,939,608 6,945,972 GRMZM2G062009 nactf17 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 142,276,736 142,279,162 GRMZM5G885329 nactf18 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 146,638,618 146,642,822 GRMZM2G155816 nactf19 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 142,222,049 142,223,803 GRMZM2G181605 nactf2 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 173,780,290 173,782,115 GRMZM2G180328 nactf20 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 148,062,214 148,064,233 GRMZM2G091490 nactf21 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 66,186,789 66,189,233 GRMZM2G156977 nactf22 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 9,417,298 9,419,858 GRMZM2G068973 nactf23 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 170,415,625 170,417,408 GRMZM2G008374 nactf24 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 191,504,046 191,505,927 GRMZM2G127379 nactf25 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 2,682,268 2,684,357 GRMZM2G113950 nactf26 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 170,273,726 170,278,146 GRMZM2G354151 nactf27 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 148,843,760 148,847,667 GRMZM2G033014 nactf28 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 2,720,485 2,721,893 GRMZM2G159500 nactf29 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 133,066,105 133,068,297 GRMZM2G147867 nactf3 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 147,704,754 147,707,417 GRMZM2G146380 nactf30 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 176,985,518 176,986,621 GRMZM2G465835 nactf31 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 149,591,626 149,592,760 GRMZM2G009892 nactf32 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 42,514,433 42,516,336 GRMZM2G025642 nactf33 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 5,629,470 5,636,419 AC208663.3_FG002 nactf34 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 30,554,102 30,555,190 GRMZM2G179049 nactf35 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 193,103,406 193,105,706 GRMZM2G081930 nactf36 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 29,749,591 29,752,453 AC198937.4_FG005 nactf37 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 83,598,016 83,599,406 GRMZM2G104400 nactf38 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 102,056,994 102,060,989 GRMZM2G126817 nactf39 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 151,938,782 151,940,287 GRMZM2G079632 nactf4 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 20,903,390 20,905,225 GRMZM5G898290 nactf40 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 125,797,543 125,799,275 GRMZM2G439903 nactf41 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 189,283,188 189,284,375 GRMZM2G074358 nactf42 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 82,927,597 82,929,052 GRMZM2G082709 nactf43 Chr1 98,104,945 98,106,412 GRMZM2G011598 nactf44 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 53,631,300 53,633,544 GRMZM2G126936 nactf45 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 146,100,422 146,101,729 GRMZM2G440219 nactf46 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 28,147,827 28,149,574 GRMZM2G112681 nactf47 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 20,832,776 20,839,314 GRMZM2G054252 nactf48 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 195,218,120 195,221,530 GRMZM2G347043 nactf49 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 292,162,441 292,164,227 GRMZM2G162739 nactf5 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 159,575,160 159,577,058 GRMZM2G475014 nactf50 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 178,427,919 178,429,404 GRMZM2G140901 nactf51 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 172,222,465 172,224,718 GRMZM2G342647 nactf52 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 20,171,779 20,179,415 GRMZM2G059428 nactf53 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 7,483,453 7,485,519 GRMZM2G030325 nactf54 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 3,872,449 3,875,734 GRMZM2G152543 nactf55 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 212,998,702 213,000,426 GRMZM2G386163 nactf56 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 134,727,893 134,737,413 GRMZM2G174070 nactf57 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 154,227,661 154,232,106 AC205484.3_FG005 nactf58 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 124,806,079 124,815,002 GRMZM2G100593 nactf59 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 207,025,280 207,028,850 GRMZM2G018553 nactf6 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 2,917,818 2,919,494 GRMZM2G336533 nactf60 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 2,887,335 2,889,124 GRMZM2G003715 nactf61 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 78,142,498 78,146,839 GRMZM2G052239 nactf62 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 779,681 780,894 GRMZM2G054277 nactf63 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 135,925,560 135,927,070 GRMZM2G077045 nactf64 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 25,170,856 25,179,088 GRMZM2G043813 nactf65 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 130,642,692 130,645,462 GRMZM2G064541 nactf66 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 38,053,466 38,062,764 GRMZM2G083347 nactf67 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 14,449,665 14,451,543 GRMZM2G459156 nactf68 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 28,855,314 28,857,245 GRMZM2G379608 nactf69 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 116,852,378 116,855,345 GRMZM2G163251 nactf7 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 283,321,395 283,323,293 GRMZM2G312201 nactf70 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 186,256,882 186,265,853 GRMZM2G099144 nactf71 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 47,676,667 47,678,102 GRMZM2G163841 nactf72 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 150,109,224 150,110,189 GRMZM2G479980 nactf73 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 4,587,851 4,589,019 GRMZM2G112548 nactf74 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 5,328,429 5,329,897 GRMZM2G100583 nactf75 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 46,961,569 46,964,308 GRMZM2G316840 nactf76 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 49,451,938 49,453,443 AC196475.3_FG005 nactf77 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 32,272,270 32,275,424 GRMZM2G406204 nactf78 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 4,241,971 4,245,996 GRMZM2G004531 nactf79 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 134,132,129 134,135,181 GRMZM2G086768 nactf8 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 116,840,085 116,849,846 GRMZM2G060116 nactf80 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 155,888,047 155,889,189 GRMZM2G042494 nactf81 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 132,501,909 132,504,247 GRMZM2G058518 nactf82 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 210,312,706 210,317,109 GRMZM2G158204 nactf83 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 45,532,530 45,535,404 GRMZM2G139700 nactf84 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 137,606,842 137,608,651 GRMZM2G435824 nactf85 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 119,146,473 119,148,431 GRMZM2G171395 nactf86 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 23,290,000 23,294,805 GRMZM2G031200 nactf87 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 164,697,457 164,699,173 GRMZM2G134687 nactf88 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 102,889,073 102,892,003 GRMZM2G340305 nactf89 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 203,127,019 203,131,923 GRMZM2G134073 nactf9 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 159,967,636 159,969,818 AC203535.4_FG002 nactf90 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 157,618,651 157,620,063 GRMZM2G041668 nactf91 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 28,053,152 28,057,136 GRMZM2G048826 nactf92 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 59,362,407 59,363,516 GRMZM5G832473 nactf93 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 176,555,601 176,557,109 GRMZM2G122615 nactf94 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 209,169,170 209,170,481 GRMZM5G813651 nactf95 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 170,066,207 170,069,008 GRMZM5G803888 nactf96 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 237,492,353 237,493,667 GRMZM2G167492 nactf97 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 4,542,485 4,559,631 GRMZM2G115721 nactf98 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 56,518,998 56,523,929 GRMZM2G027309 nactf99 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 116,761,395 116,766,110 GRMZM2G018941 nad1 from: T15339 Chr1 51,011,368 51,013,407 GRMZM5G878308 nad2 Chr8 154,962,386 154,965,330 GRMZM2G008464 nad3 Chr8 80,199,540 80,203,096 GRMZM2G137312 nad4 Chr1 6,540,564 6,544,389 GRMZM2G014382 nad5 Chr1 4,055,334 4,063,464 GRMZM2G385200 nas1 from Zhou et al 2013 Chr9 135,804,104 135,805,335 GRMZM2G034956 nas10 one of 3 gene model on B73_V2 that align to cDNA AB061270 reported in Mizuno et al 2003 Chr9 136,049,697 136,050,938 GRMZM2G030036 nas2 from Zhou et al 2013 Chr1 49,283,725 49,286,176 GRMZM2G478568 nas3 from Zhou et al 2013 Chr1 259,836,588 259,838,272 GRMZM2G439195 nas4 from Zhou et al 2013 Chr5 15,816,565 15,818,557 GRMZM2G050108 nas5 from Zhou et al 2013 Chr7 174,448,119 174,450,107 GRMZM2G704488 nas6 from Zhou et al 2013 Chr9 135,552,425 135,553,600 AC233955.1_FG003 nas7 from Zhou et al 2013 Chr9 135,559,726 135,560,709 GRMZM2G312481 nas8 from Zhou et al 2013 Chr9 135,973,757 135,974,988 GRMZM2G124785 nas9 from Zhou et al 2013 Chr1 49,317,235 49,319,685 GRMZM2G455658 natl1 Best et al., 2016 Chr4 169,187,814 169,189,693 GRMZM2G011129 nbp1 Classical Gene Chr7 46,493,910 46,497,427 GRMZM2G011129 nbp1 Chr7 46,493,910 46,497,427 GRMZM2G031496 nbp35 Chr5 181,446,831 181,450,049 GRMZM2G407181 nced2 Owens et al., 2014 Chr1 174,550,907 174,553,815 GRMZM5G858784 nced3 from EU955712 Chr3 87,358,369 87,360,132 GRMZM2G408158 nced4 Owens et al., 2014 Chr2 235,244,890 235,246,909 GRMZM2G417954 nced5 from BT062179 Chr7 5,981,141 5,983,425 GRMZM2G110192 nced6 Owens et al., 2014 Chr4 159,750,700 159,753,143 GRMZM2G330848 nced7 Owens et al., 2014 Chr7 175,907,236 175,908,949 GRMZM2G150363 nced8 Owens et al., 2014 Chr5 200,743,141 200,745,544 GRMZM5G838285 nced9 Owens et al., 2014 Chr5 16,869,343 16,871,148 GRMZM2G134797 ndk1 Classical Gene Chr7 149,952,414 149,954,818 GRMZM2G178576 ndpk1 Kopylov et al., 2015 Chr1 94,688,138 94,693,847 GRMZM5G870342 nec4 from DQ250640 Chr2 10,671,618 10,672,229 GRMZM2G075637 nfa104 Chr5 176,433,165 176,437,607 GRMZM2G090217 nfc103a based on genetic map, and alignment to sequence AF440219 Chr1 251,873,300 251,887,770 GRMZM2G320606 nfc103b based on genetic map position, and alignment to sequence AF440219 Chr5 17,928,839 17,933,771 GRMZM2G032711 nfc104a based on genetic map position, and alignment to sequence AY093418 Chr7 175,605,746 175,613,533 GRMZM2G145968 nfd102 Chr2 17,972,424 17,980,326 GRMZM2G125648 nfd106 from: AF440223 and assigned by the Grassius project, (Yilmaz et al 2009) to hmg7 Chr4 195,556,757 195,558,537 GRMZM2G032252 nfd110 from: AJ244017 Chr8 21,829,304 21,836,106 GRMZM5G804893 nfy2 from: X59714 & assigned by the Grassius project, (Yilmaz et al 2009) to cadtfr17 Chr6 152,381,850 152,387,535 GRMZM2G000686 nfya1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 15,805,373 15,808,637 GRMZM2G110210 nfyc2 Zhang et al., 2016 Chr1 73,920,871 73,922,877 GRMZM2G079381 nii2 from: Enrez Gene 542264 Chr4 178,613,063 178,616,618 GRMZM2G041980 nip1a from BT040783 on v3 Chr5 148,343,674 148,346,041 GRMZM2G028325 nip2a Chr5 206,972,501 206,976,357 GRMZM2G137108 nip2b Chr6 113,136,258 113,140,405 GRMZM2G081239 nip2c from: AF342810 Chr9 4,504,176 4,507,865 GRMZM2G178517 nit1 B73_v2 alignment to sequence accession AY156979 Chr5 188,512,723 188,518,155 GRMZM2G111225 nit2 B73_V2 alignment to sequence accession AY156978 from Park et al 2003 Chr4 145,590,144 145,596,670 GRMZM2G129261 nkd1 Yi et al., 2015 Chr2 17,718,739 17,726,319 GRMZM5G884137 nkd2 Yi et al., 2015 Chr10 137,525,111 137,530,608 AC233880.1_FG006 nlp1 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 1,290,534 1,292,045 GRMZM2G071322 nlp10 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 226,910,212 226,911,995 GRMZM2G472589 nlp11 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 226,922,510 226,928,416 GRMZM2G105641 nlp12 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 206,943,203 206,944,195 GRMZM2G053298 nlp13 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 147,146,774 147,152,347 GRMZM2G392306 nlp14 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 4,398,480 4,399,600 GRMZM2G042278 nlp15 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 76,715,126 76,718,411 GRMZM2G004663 nlp16 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 98,208,303 98,218,330 GRMZM2G048582 nlp17 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 198,102,096 198,107,328 GRMZM2G057131 nlp2 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 18,055,134 18,060,421 GRMZM2G031398 nlp3 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 33,701,563 33,710,286 GRMZM2G375675 nlp4 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 29,209,906 29,216,097 AC207342.3_FG001 nlp5 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 135,914,954 135,916,479 GRMZM2G475305 nlp6 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 1,540,716 1,545,106 GRMZM2G109509 nlp7 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 7,079,807 7,085,736 GRMZM2G176655 nlp8 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 133,982,025 133,991,228 GRMZM2G105004 nlp9 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 127,592,222 127,597,271 GRMZM2G568636 nnr1 Classical Gene Chr4 56,335,735 56,340,792 GRMZM2G027821 nod1 Rosa et al, 2017 Chr1 11,979,866 11,984,789 AC233751.1_FG002 not1 Preston et al 2011 Chr4 44,806,723 44,811,049 GRMZM2G350841 npi285a(cac) Chr10 5,006,086 5,010,500 GRMZM2G158668 npi393 Chr6 96,837,112 96,840,842 GRMZM2G069260 npi414a Chr8 169,336,134 169,340,170 GRMZM2G069198 nrat1 Guimaraes et al., 2014 Chr5 43,175,325 43,180,945 GRMZM2G062650 nrp1 assigned by the Grassius project, (Yilmaz et al 2009) to nactf128 Chr3 31,805,298 31,807,331 GRMZM2G054225 nrpd2/e2 from GQ356034 and GQ453405 Chr2 6,336,518 6,347,954 GRMZM2G010251 nrt1 from: AY659965 Chr4 240,790,398 240,792,301 GRMZM2G010280 nrt2 from: AJ344451 Chr4 240,779,448 240,781,473 GRMZM2G163866 nrt3 from: AY968681 Chr5 68,900,266 68,902,129 GRMZM2G163494 nrt4 from: NM_001112454 Chr2 37,958,393 37,960,212 GRMZM2G048324 nrx1 from: BT037898 Chr1 70,432,377 70,436,980 GRMZM2G069028 ns1 Classical Gene Chr2 143,166,134 143,168,172 Zm00001d052598 ns2 v4 Chr4 194,314,663 194,315,585 Zm00001d052598 ns2 v4 Chr4 194,314,663 194,315,808 GRMZM2G110258 nta1 Chr9 154,869,141 154,872,005 GRMZM2G006953 ntf1 Chr4 44,885,697 44,888,397 GRMZM2G407249 ntf1 Chr1 194,524,205 194,526,962 GRMZM2G073377 nthr3 from: BT042787 Chr7 141,680,355 141,682,024 GRMZM2G031461 nudix1 Chr7 88,132,355 88,151,112 GRMZM2G170013 nyc1 Chan et al., 2017 Chr3 2,138,069 2,142,526 GRMZM2G449909 o1 from Wang et al., 2012 Chr4 176,899,980 176,926,797 GRMZM2G346263 o10 Yao et al., 2016 Chr1 265,018,615 265,025,388 GRMZM2G015534 o2 Classical Gene Chr7 10,798,507 10,801,399 GRMZM2G142873 o5 from alignment of fl cDNA BT042676 (Myers et al 2011) Chr7 117,734,381 117,741,648 GRMZM2G074759 o7 Miclaus et al., 2011 Chr10 148,065,471 148,067,620 GRMZM2G479885 obf1 assigned by the Grassius project, (Yilmaz et al 2009) to bzip39 Chr1 147,170,752 147,172,309 GRMZM2G019907 obf3 from BT034456 Chr3 187,349,410 187,394,170 GRMZM2G125243 obf4 from BT066069 Chr8 170,849,743 170,855,748 GRMZM2G026643 ocl1 Classical Gene Chr3 27,552,061 27,559,751 AC235534.1_FG007 ocl2 Classical Gene Chr10 136,957,427 136,964,001 GRMZM2G116658 ocl3 Classical Gene Chr7 141,712,281 141,718,468 GRMZM2G123140 ocl4 Classical Gene Chr1 100,912,576 100,918,541 GRMZM2G130442 ocl5a Classical Gene Chr4 29,008,617 29,014,800 GRMZM2G151041 odo1 Chr10 109,817,358 109,823,752 GRMZM2G021617 oec2 from: M87435 (chr 9 hit) Chr9 57,921,763 57,923,880 GRMZM2G156857 oec23 from: BT056224 Chr8 78,520,915 78,522,102 GRMZM2G175562 oec33 chr 6 B73_V2 alignment to EU959681 Chr6 88,908,079 88,909,780 GRMZM2G113349 oec33b from B73_V2 alignment to cDNA EU959477 Chr5 51,897,880 51,899,471 GRMZM2G058070 oec6 Classical Gene & Z26824 (chr 7 hit) Chr7 155,404,548 155,405,848 GRMZM2G055737 ofp1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 5,511,015 5,512,341 GRMZM2G032478 ofp10 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 142,057,406 142,058,499 GRMZM2G130131 ofp11 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 142,230,107 142,231,460 GRMZM2G359116 ofp12 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 217,596,031 217,596,732 GRMZM2G169973 ofp13 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 2,145,565 2,147,044 GRMZM2G434098 ofp14 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 176,376,917 176,378,611 GRMZM2G133311 ofp15 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 176,399,487 176,401,158 GRMZM2G330159 ofp16 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 184,369,059 184,370,437 GRMZM2G127431 ofp17 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 198,109,815 198,111,352 GRMZM2G023285 ofp18 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 200,770,762 200,772,307 AC198725.4_FG004 ofp19 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 217,373,974 217,375,254 GRMZM2G096252 ofp2 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 12,208,463 12,209,068 GRMZM2G150823 ofp20 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 222,037,098 222,037,820 GRMZM2G013302 ofp21 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 190,514,387 190,515,895 GRMZM2G013271 ofp22 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 190,553,240 190,554,695 GRMZM2G041761 ofp23 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 196,301,608 196,303,357 GRMZM2G436659 ofp24 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 475,010 478,353 GRMZM2G100133 ofp25 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 134,751,875 134,753,206 GRMZM2G122709 ofp26 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 149,397,746 149,398,805 GRMZM2G430871 ofp27 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 149,479,675 149,480,789 GRMZM2G026927 ofp28 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 154,037,242 154,038,876 GRMZM2G127680 ofp29 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 159,209,864 159,210,811 GRMZM2G121706 ofp3 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 23,422,957 23,424,234 GRMZM2G037043 ofp30 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 95,805,103 95,806,257 GRMZM5G845472 ofp31 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 173,016,115 173,017,181 GRMZM2G001721 ofp32 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 19,242,262 19,242,864 GRMZM2G067376 ofp33 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 91,371,796 91,372,796 GRMZM2G028982 ofp34 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 144,996,205 144,997,637 GRMZM2G085035 ofp35 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 166,174,085 166,175,881 AC204502.4_FG006 ofp36 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 169,827,040 169,828,125 GRMZM2G137869 ofp37 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 125,223,241 125,224,349 GRMZM2G057753 ofp38 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 6,401,895 6,403,520 AC187891.3_FG006 ofp39 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 6,406,678 6,407,469 GRMZM2G075988 ofp4 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 56,308,513 56,309,790 GRMZM2G432846 ofp40 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 120,555,416 120,556,201 GRMZM2G040673 ofp41 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 136,127,929 136,129,652 GRMZM2G106836 ofp42 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 148,249,961 148,250,692 GRMZM2G106781 ofp43 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 148,265,774 148,266,844 GRMZM2G039312 ofp5 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 82,197,775 82,199,916 GRMZM2G095452 ofp6 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 238,871,804 238,872,878 GRMZM2G164428 ofp7 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 15,919,760 15,921,239 GRMZM2G053985 ofp8 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 45,347,688 45,348,600 GRMZM2G055257 ofp9 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 56,421,131 56,422,484 GRMZM2G139031 ogg1 Chr5 172,334,155 172,337,856 GRMZM2G016150 ohp1 Classical Gene Chr1 288,278,441 288,283,216 GRMZM2G007063 ohp2 Classical Gene Chr5 4,253,958 4,257,719 GRMZM2G337229 ole1 Classical Gene Chr2 21,389,641 21,391,610 AC206941.2_FG002 ole3 Classical Gene Chr5 12,302,727 12,303,287 GRMZM2G480954 ole4 from: U13702 Chr1 263,817,609 263,818,594 GRMZM2G018417 ommp1 from: EU956492 Chr1 8,306,859 8,347,066 GRMZM2G127948 omt1 Li et al., 2013 Chr6 79,357,043 79,359,228 GRMZM2G099363 omt2 from: AI637136 Chr9 16,325,170 16,327,546 GRMZM2G077486 omt3 Chr10 80,419,760 80,423,498 GRMZM2G332522 omt4 Chr4 198,256,537 198,258,374 GRMZM2G106303 opr1 B73_v2 alignment to AY108052 Chr9 7,393,651 7,395,331 GRMZM2G000236 opr2 B72_v2 alignment to AY921639 Chr9 7,308,584 7,310,337 GRMZM2G156712 opr3 from alignment to cDNA AY921640 on B73_V@ Chr6 111,640,645 111,642,331 Zm00001d011097 opr4 from alignment to AY921641 Chr8 138,824,703 138,825,854 GRMZM2G087192 opr5 from B73_v2 alignment to cDNA AY921642 Chr2 47,717,535 47,720,768 GRMZM2G068947 opr6 from B73_V2 alignment to cDNA AY921643 Chr3 69,859,514 69,861,831 GRMZM2G148281 opr7 from alignment on B73_v2 of cDNA AY921644 Chr1 207,946,160 207,950,205 GRMZM2G082087 opr8 aligns to cDNA AY921645 Chr4 63,562,327 63,567,747 GRMZM2G455243 orc1 Chr9 12,350,567 12,372,569 GRMZM2G117238 orc2 Chr5 190,532,565 190,536,335 GRMZM2G381822 orc3 Chr1 174,021,190 174,024,616 GRMZM5G876520 orc4 Chr3 207,987,759 207,990,967 GRMZM2G089556 orc5 from: EU954679 Chr5 6,552,930 6,555,038 GRMZM5G834666 orf140-b (mt) Wei & Han, 2016 ChrMt 265,988 266,410 GRMZM2G156255 ork1 Chr6 115,732,874 115,738,363 GRMZM2G169593 orp1 Classical Gene Chr4 35,950,109 35,954,045 GRMZM2G169593 orp1 Chr4 35,950,109 35,954,045 GRMZM2G005024 orp2 Classical Gene Chr10 84,247,242 84,250,053 GRMZM5G899787 orrm1 Sun et al., 2013 Chr5 204,811,304 204,817,342 GRMZM2G462325 ost1 Chr7 19,083,049 19,101,243 GRMZM2G325019 otp51 Belcher et al., 2015 Chr5 200,487,577 200,491,114 GRMZM2G383088 oxmt1 alignment of cDNA AB112936 to B73_v2 assemgly Chr10 28,396,447 28,402,412 GRMZM2G419806 oy1 Classical Gene Chr10 9,225,307 9,229,786 GRMZM5G822829 P This is probably the correct locus associated with this gene model in B73, which is r1-r. Chr10 138,489,998 138,498,818 GRMZM2G084799 p1 Classical Gene Chr1 48,118,788 48,129,338 GRMZM2G057027 p2 Classical Gene Chr1 48,096,443 48,101,954 GRMZM2G178460 paac1 Chr3 39,820,091 39,823,461 GRMZM2G058292 pac1 Classical Gene Chr5 196,661,199 196,666,224 GRMZM2G074604 pal1 Classical Gene Chr5 186,727,239 186,730,980 GRMZM2G441347 pal2 from: BT069509 Chr2 28,745,742 28,748,887 GRMZM2G160541 pal3 from: M95077 (chr 4 hit) Chr4 143,404,315 143,408,521 GRMZM2G063917 pal4 Chr4 143,539,451 143,542,437 GRMZM2G081582 pal5 Chr4 143,491,905 143,496,980 GRMZM2G118345 pal6 Chr2 28,677,255 28,680,358 GRMZM2G170692 pal7 Rius et al., 2016 Chr5 186,845,785 186,848,361 GRMZM2G334660 pal8 Chr5 186,783,199 186,785,900 GRMZM2G029048 pal9 Chr5 186,776,435 186,780,444 GRMZM5G836190 pan1 sequence alignment to B73_v2 by DNA accession FJ231525 (Nov 2011 M Schaeffer) Chr1 188,011,520 188,014,028 GRMZM2G034572 pan2 Zhang et al., 2012 Chr2 237,789,995 237,798,040 GRMZM2G034152 pao1 Chr10 62,260,920 62,265,303 GRMZM2G124718 parp1 from: BT034831 Chr8 44,048,003 44,054,105 GRMZM5G831712 parp2 Chr2 158,095,514 158,128,380 GRMZM2G177508 pba1 from: EU962752 (chr1 hit) Chr1 5,582,721 5,584,189 GRMZM2G146283 pbf1 assigned by the Grassius project, (Yilmaz et al 2009) to dof3; renamed dof103; subsequesntly found indentical to pbf1 Chr2 154,144,472 154,148,029 GRMZM2G123709 pc326 Chr9 126,453,735 126,456,483 GRMZM2G001696 pck1 from alignment to cDNA AB018744 Chr1 35,744,406 35,748,813 GRMZM5G870932 pck2 from: BT054804 Chr9 142,082,081 142,086,925 GRMZM2G030523 pcna1 Classical Gene Chr5 214,473,508 214,475,861 GRMZM2G108712 pcna2 from: Entrez gene 542357 Chr4 173,062,872 173,064,850 GRMZM2G168375 pco061803 Chr8 156,176,245 156,178,529 GRMZM2G072911 pco065449 Chr5 196,155,729 196,159,058 GRMZM2G410812 pco066521 Chr6 153,662,746 153,665,882 GRMZM2G178958 pco101682(581) from: AY103547 Chr5 213,590,124 213,594,002 GRMZM2G043291 pco124824 Chr1 43,114,366 43,116,827 GRMZM2G006791 pco131924a Chr5 172,434,779 172,439,962 GRMZM2G055678 PCO134814 Chr6 134,643,812 134,656,424 GRMZM2G026892 PCO135705 Chr5 23,284,770 23,288,690 GRMZM2G045275 pco135758 Jamann et al., 2017 Chr3 218,979,525 218,985,381 GRMZM2G049021 pco137163 Chr5 133,656,772 133,665,057 GRMZM2G084958 pcr1 from sequence accession EU963402.1 GI:195627379 | PCO151862 AY106314.1 GI:21209392 | Chr2 1,463,875 1,465,462 AC197705.4_FG001 pdc1 from X17555 Chr8 117,692,828 117,694,964 GRMZM2G038821 pdc2 Classical Gene Chr8 15,550,758 15,554,318 GRMZM2G087186 pdc3 Classical Gene Chr1 45,517,324 45,520,500 GRMZM2G361693 pdh1 from: AF069911 Chr4 182,908,776 182,913,540 GRMZM2G043198 pdh2 from: AF069908 Chr1 195,433,120 195,449,499 GRMZM2G097226 pdh3 from: AF069909 Chr2 193,226,331 193,233,048 GRMZM2G128121 pdh4 from: AF069910 Chr7 135,870,838 135,874,027 GRMZM2G091481 pdi1 Classical Gene Chr4 14,877,067 14,881,858 GRMZM2G091481 pdi1 from Cell Genomics project Oct 2013) Chr4 14,877,067 14,881,858 GRMZM2G113629 pdi10 Chr2 50,618,990 50,621,060 GRMZM2G176443 pdi11 from: AY739293 Chr10 117,344,580 117,348,113 GRMZM2G067063 pdi12 Chr2 204,369,552 204,379,182 GRMZM2G163421 pdi2 from: AY739285 Chr2 221,208,466 221,212,560 GRMZM2G134889 pdi3 Chr4 241,788,226 241,794,277 GRMZM2G033829 pdi4 from: AY739287 Chr5 66,062,056 66,073,374 GRMZM2G014076 pdi5 Chr9 16,724,287 16,729,342 GRMZM2G128171 pdi6 from: AY739288 Chr3 64,460,450 64,464,396 GRMZM2G159369 pdi7 from: AY739289 Chr6 126,962,678 126,967,338 GRMZM2G389173 pdi8 from: AY739290 Chr7 124,417,173 124,422,099 GRMZM2G073628 pdi9 Chr1 44,196,096 44,197,753 GRMZM2G306345 pdk1 aligns to genbank accession S46966 (M Schaeffer 2012) Chr6 146,179,404 146,189,965 GRMZM2G097457 pdk2 aligns to sequence S46967 (M Schaeffer 2012)) Chr8 106,530,187 106,541,083 GRMZM2G097821 pdk3 Zaidi et al., 2015 Chr3 174,102,966 174,108,133 AC217975.3_FG001 pdk4 Chr7 168,632,072 168,635,401 GRMZM2G107196 pdlk1 Chr1 64,007,986 64,013,684 GRMZM2G066860 pdlp1 from Cell Genomics Project (Oct 20130 Chr1 8,877,557 8,880,470 GRMZM2G131286 pdrp1 from B73_V2 alignment to cDNA DQ645424.1 GI:108733638 Chr2 204,498,422 204,501,387 GRMZM2G092008 pebp1 Classical Gene Chr3 231,199,114 231,200,263 GRMZM2G152689 pebp10 Classical Gene Chr3 28,400,356 28,402,122 GRMZM2G117057 pebp11 Classical Gene Chr6 121,720,043 121,721,582 GRMZM2G103666 pebp12 Classical Gene Chr3 197,706,353 197,708,239 GRMZM2G108016 pebp13 Classical Gene Chr5 150,036,613 150,037,929 GRMZM2G373928 pebp14 Classical Gene Chr8 25,338,663 25,347,919 GRMZM2G051338 pebp15 Classical Gene Chr6 76,400,211 76,402,023 GRMZM2G127121 pebp16 Classical Gene Chr5 181,990,493 181,993,244 GRMZM2G075215 pebp17 Classical Gene Chr2 120,292,154 120,293,853 GRMZM2G158809 pebp18 Classical Gene Chr2 193,839,589 193,845,094 GRMZM2G062052 pebp19 Classical Gene Chr10 126,937,360 126,941,217 GRMZM2G156079 pebp2 Classical Gene Chr4 106,696,523 106,697,982 AC214791.2_FG002 pebp20 Classical Gene Chr10 36,388,693 36,389,588 GRMZM2G019993 pebp21 Alter et al., 2016 Chr2 74,102,888 74,107,552 GRMZM2G440005 pebp24 Chr7 138,923,902 138,933,246 GRMZM2G021560 pebp25 From: EU241936 Chr2 35,895,307 35,898,831 GRMZM2G400167 pebp26 Chr9 77,335,866 77,339,429 GRMZM2G338454 pebp3 Classical Gene Chr10 5,465,315 5,465,881 GRMZM2G075081 pebp4 Classical Gene Chr2 58,373,992 58,376,007 AC217051.3_FG006 pebp5 Classical Gene Chr10 114,050,161 114,051,244 GRMZM2G132880 pebp6 Classical Gene Chr4 188,561,914 188,563,106 GRMZM2G141756 pebp7 Classical Gene Chr6 159,399,177 159,400,713 GRMZM2G179264 pebp8 Classical Gene Chr8 123,030,387 123,032,175 GRMZM2G179264 pebp8 Chr8 123,030,387 123,032,175 GRMZM2G021614 pebp9 Classical Gene Chr8 8,472,799 8,475,229 GRMZM2G083841 pep1 Classical Gene Chr9 62,306,266 62,311,673 GRMZM2G069542 pep2 from: BT085108 Chr5 144,847,481 144,855,080 GRMZM2G074122 pep3 originally from: X67471 (chr 4 hit) [and more strongly to chr5 B73 sequences assigned in Apr 2015] Chr4 227,807,369 227,818,655 GRMZM2G473001 pep4 Classical Gene Chr7 86,459,173 86,464,913 GRMZM2G087063 pet2 provided by A Barkan (2010) Chr1 80,629,933 80,632,693 GRMZM2G177145 pet3 Chr2 5,103,401 5,103,769 GRMZM5G841015 pex1 Classical Gene Chr2 231,055,349 231,059,232 GRMZM2G478929 pex2 Chr4 3,413,177 3,413,824 GRMZM2G059151 pfk1 from: T70624 Chr6 115,372,536 115,378,936 GRMZM2G450163 pfk2 Liu et al., 2016 Chr1 221,791,929 221,796,752 GRMZM2G127798 pgd1 from: AF061838 Chr6 57,903,596 57,906,292 GRMZM2G145715 pgd2 Classical Gene Chr3 153,964,271 153,968,156 GRMZM2G440208 pgd3 Chr4 18,596,164 18,598,086 GRMZM2G094811 pgl1 from: DQ421831 Chr6 99,520,235 99,522,243 GRMZM2G320175 pgl2 Classical Gene Chr6 99,582,016 99,584,295 GRMZM2G160526 pgl7 Chr6 99,103,865 99,105,564 GRMZM2G394259 pgl8 Classical Gene Chr6 99,529,941 99,532,218 GRMZM2G023289 pgm1 Based on homology to Genbank mRNA sequence. Chr1 267,953,427 267,960,205 GRMZM2G109383 pgm2 Based on homology to Genbank mRNA sequence. Chr5 10,865,997 10,872,126 GRMZM2G372632 pgr3 Belcher et al., 2015 Chr9 124,424,696 124,428,135 GRMZM2G134955 phb1 Chr2 171,554,524 171,555,173 GRMZM2G107114 phb2 Chr10 123,209,142 123,210,706 GRMZM2G410710 phb3 Chr5 177,870,707 177,873,657 AC217358.3_FG005 phb4 Chr1 296,971,341 296,973,619 GRMZM2G039895 phd1 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 1,537,642 1,541,643 GRMZM2G335720 phd10 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 136,676,466 136,698,927 GRMZM2G408897 phd11 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 10,447,338 10,450,616 GRMZM2G455664 phd12 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 27,533,651 27,548,861 GRMZM2G059266 phd13 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 40,387,081 40,391,160 GRMZM2G178072 phd14 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 152,453,261 152,461,059 GRMZM2G173852 phd15 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 276,041,856 276,051,331 GRMZM2G168249 phd16 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 107,265,910 107,274,437 GRMZM2G155123 phd17 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 131,105,649 131,117,697 GRMZM2G443565 phd18 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 4,449,604 4,458,482 GRMZM2G412492 phd19 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 8,831,484 8,837,242 GRMZM2G119357 phd2 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 216,523,958 216,531,563 GRMZM5G843893 phd20 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 1,903,989 1,908,431 GRMZM2G156129 phd21 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 29,170,751 29,171,909 GRMZM2G045544 phd22 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 203,702,356 203,707,024 GRMZM2G103230 phd23 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 58,423,170 58,430,307 GRMZM2G434715 phd24 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 174,811,135 174,819,968 GRMZM2G087482 phd25 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 7,451,874 7,467,413 GRMZM2G316191 phd26 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 150,195,961 150,215,431 GRMZM2G071613 phd27 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 36,768,420 36,771,264 GRMZM2G068331 phd28 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 10,235,511 10,240,157 GRMZM2G466270 phd29 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 65,470,804 65,484,230 GRMZM2G097726 phd3 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 13,356,454 13,364,295 GRMZM2G091265 phd30 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 105,935,513 105,940,065 GRMZM2G181158 phd31 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 201,783,834 201,787,692 GRMZM2G134214 phd32 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 54,934,854 54,944,793 GRMZM5G871463 phd33 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 79,026,612 79,032,492 GRMZM2G158194 phd34 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 9,045,175 9,047,443 GRMZM5G813111 phd35 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 276,177,130 276,182,727 GRMZM5G889372 phd36 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 136,728,879 136,733,895 GRMZM2G473258 phd38 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 94,679,099 94,681,569 GRMZM2G385338 phd39 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 234,727,096 234,739,242 GRMZM2G365888 phd4 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 27,274,598 27,281,804 GRMZM2G081350 phd40 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 133,770,585 133,777,342 GRMZM2G149587 phd42 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 156,446,973 156,452,761 GRMZM2G025703 phd43 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 171,075,200 171,078,825 GRMZM2G391413 phd5 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 239,865,653 239,878,509 GRMZM2G022945 phd6 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 48,527,429 48,531,044 GRMZM2G038050 phd8 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 148,985,897 148,996,435 GRMZM2G073581 phd9 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 141,102,389 141,111,678 GRMZM2G346455 phi002 Chr1 228,306,620 228,318,304 GRMZM2G065083 phi1 from: U17225 Chr1 283,156,653 283,159,112 GRMZM2G380515 phm10525 Chr8 125,606,805 125,613,287 GRMZM2G069773 phm13360 Chr2 111,452,832 111,456,698 GRMZM2G022088 phm13823 Chr3 40,318,889 40,324,047 GRMZM2G067601 phm15278 Chr8 156,263,468 156,265,092 GRMZM2G098800 phm1558 Chr4 153,223,584 153,226,721 GRMZM2G003883 phm15899 Chr3 44,224,072 44,229,612 GRMZM2G096470 phm1675 Chr3 182,131,706 182,144,018 GRMZM2G080917 phm1959 Chr3 170,149,613 170,154,226 GRMZM2G472428 phm229 Chr9 30,063,256 30,088,418 GRMZM2G076104 phm2343 Chr3 28,334,298 28,336,773 GRMZM2G119104 phm3226 Chr1 22,583,820 22,595,788 GRMZM2G041015 phm3342 Chr3 217,773,782 217,777,054 GRMZM2G023020 phm3457 Chr2 63,554,418 63,558,011 GRMZM2G072337 phm4341 Chr10 117,586,271 117,590,284 GRMZM2G092129 phm4353 Chr7 34,183,685 34,198,384 GRMZM2G325762 phm4880 Chr2 107,818,821 107,820,874 GRMZM2G112247 phm532 Chr5 193,782,893 193,784,506 GRMZM2G345667 phm5822 Chr2 10,522,351 10,526,336 GRMZM2G313481 phm662 Chr5 1,045,283 1,050,017 GRMZM2G110408 phm8909 Chr9 110,677,553 110,681,978 GRMZM2G156713 phm9695 Chr8 12,285,354 12,288,966 GRMZM2G140107 phm9914 Chr3 161,295,516 161,301,138 GRMZM2G074158 pho1 Chr1 278,250,612 278,259,617 GRMZM2G085577 pho2 Chr3 179,031,418 179,040,320 GRMZM5G891944 phos1 Salazar-Vidal et al., 2016 Chr3 28,919,073 28,923,612 GRMZM2G466545 phos2 Salazar-Vidal et al., 2016 Chr4 171,946,555 171,952,268 GRMZM5G851655 phos3 cited as GRMZM2G058444 Salazar-Vidal et al., 2016 Chr5 215,112,901 215,114,452 GRMZM2G064657 phos4 Salazar-Vidal et al., 2016 Chr6 122,577,593 122,582,074 GRMZM2G001457 phot1 Classical Gene Chr3 229,220,592 229,241,592 GRMZM2G032351 phot2 from EU955535 Chr1 220,359,597 220,392,126 GRMZM2G172596 php20075a(gast) Chr10 2,649,738 2,651,194 GRMZM2G089056 php20537b Chr1 6,914,659 6,919,235 GRMZM2G172751 php20603 Chr1 8,533,004 8,536,769 GRMZM2G101818 php20608a Chr4 237,244,514 237,245,531 GRMZM2G076435 php20725a Chr4 5,044,212 5,046,753 GRMZM2G100103 phs1 from BT041980 Chr9 52,042,688 52,059,619 GRMZM2G326707 pht1 from: AY639019 Chr5 31,900,810 31,903,008 GRMZM2G075870 pht10 Chr1 8,032,558 8,034,556 GRMZM2G139639 pht11 Chr7 34,937,541 34,939,375 GRMZM2G009800 pht12 Chr2 99,926,376 99,930,029 GRMZM2G170208 pht13 Chr2 99,805,638 99,807,544 GRMZM2G154090 pht2 from: AY974041 Chr1 236,840,157 236,842,176 GRMZM2G045473 pht3 from: AY639021 Chr2 99,381,968 99,383,837 GRMZM2G159075 pht4 from: AY639022 Chr10 100,011,935 100,014,106 GRMZM2G041595 pht5 from: AY974045 Chr7 172,022,758 172,024,519 GRMZM5G881088 pht6 from: AY974046 Chr8 147,629,397 147,631,460 GRMZM2G112377 pht7 from: AY974043 Chr1 202,585,823 202,587,997 GRMZM2G009779 pht8 Chr2 99,885,266 99,886,925 GRMZM2G070087 pht9 Chr1 11,209,543 11,211,528 GRMZM2G157727 phyA1 Classical Gene Chr1 269,388,274 269,395,277 GRMZM2G181028 phyA2 from: AY260865 Chr5 10,111,505 10,117,216 GRMZM2G124532 phyB1 Classical Gene Chr1 50,023,180 50,034,523 GRMZM2G092174 phyB2 Classical Gene Chr9 135,245,567 135,251,882 GRMZM2G057935 phyC1 Classical Gene Chr1 277,059,620 277,064,623 GRMZM2G129889 phyC2 Classical Gene Chr5 7,129,937 7,134,953 GRMZM2G140101 phys1 from: U75531 Chr3 131,730,020 131,731,520 GRMZM2G043336 phys2 from: AJ223471 Chr3 132,181,945 132,183,468 GRMZM2G387528 pif3 from primers in Gao et al 2015; also assigned by the Grassius project, (Yilmaz et al 2009) Chr8 935,667 938,714 AC234161.1_FG001 piip1 Classical Gene Chr9 117,425,596 117,425,985 GRMZM2G300135 piip2 from: AF001635 Chr5 61,702,710 61,706,176 GRMZM2G098643 pin1 From Forestan et al 2012 Chr9 3,650,989 3,654,397 GRMZM2G126260 pin10 from Forestan et al 2012 Chr3 214,980,803 214,985,892 GRMZM2G040911 pin11 from Forestan et al 2012 Chr2 192,510,578 192,514,240 GRMZM2G160496 pin12 from Forestan et al 2012 Chr9 16,732,113 16,734,511 GRMZM2G050089 pin14 from Forestan et al 2012 Chr3 185,812,392 185,817,191 GRMZM2G403601 pin15 Li et al, 2017 Chr3 20,120,984 20,121,889 GRMZM2G074267 pin2 from Forestan et al 2012 Chr5 206,777,162 206,780,578 GRMZM2G149184 pin3 aligns to sequence EU570251; see also Forestan et al 2012 Chr4 182,180,280 182,183,396 GRMZM2G171702 pin4 from Forestan et al 2012 Chr4 186,818,289 186,821,067 GRMZM2G025742 pin5 from Forestan et al 2012 Chr3 160,795,816 160,799,946 GRMZM2G148648 pin7 from Forestan et al 2012 Chr1 193,487,892 193,489,699 GRMZM5G839411 pin8 from Forestan et al 2012 Chr3 203,002,580 203,005,107 GRMZM5G859099 pin9 from Forestan et al 2012 Chr3 187,868,057 187,871,142 GRMZM2G174807 pip1a from: X82633 (chr 2 hit) Chr2 18,757,671 18,759,694 AC209208.3_FG002 pip1b Classical Gene Chr5 193,359,341 193,362,190 GRMZM2G392975 pip1c Classical Gene Chr4 153,654,423 153,658,268 GRMZM2G392975 pip1d from: Entrez Gene 541886 Chr4 153,654,423 153,658,268 GRMZM2G081843 pip1e Classical Gene Chr4 170,004,633 170,006,133 GRMZM2G136032 pip1f Classical Gene Chr9 6,467,685 6,469,385 GRMZM2G178693 pip2a Classical Gene Chr2 28,493,204 28,495,467 GRMZM2G092125 pip2b Classical Gene Chr2 169,186,912 169,190,423 GRMZM2G081192 pip2c Classical Gene Chr4 143,891,075 143,894,123 GRMZM2G154628 pip2d Classical Gene Chr5 195,239,679 195,242,694 GRMZM2G014914 pip2e Classical Gene Chr7 41,435,006 41,438,812 GRMZM2G047368 pip2f Classical Gene Chr7 41,553,959 41,555,454 GRMZM2G309025 pk3 Chr7 156,513,100 156,515,973 GRMZM2G014833 pk4 Classical Gene Chr3 195,572,570 195,576,335 GRMZM2G018728 pki1 Classical Gene Chr1 52,805,139 52,807,763 GRMZM2G091302 pks1 from: EU967359 Chr2 8,724,139 8,731,931 GRMZM2G701063 pl1 Classical Gene Chr6 108,491,299 108,492,380 GRMZM2G408887 platz1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 39,877,358 39,878,626 GRMZM2G323553 platz10 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 124,275,861 124,276,933 GRMZM2G004548 platz11 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 198,868,436 198,870,185 GRMZM2G006585 platz12 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 51,608,197 51,609,614 GRMZM2G093270 platz13 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 112,352,112 112,354,428 GRMZM2G077495 platz14 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 122,343,878 122,349,453 GRMZM2G086403 platz15 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 135,709,748 135,712,426 GRMZM2G311656 platz2 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 69,256,093 69,257,978 GRMZM2G094168 platz3 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 98,770,498 98,772,402 GRMZM2G171934 platz4 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 204,103,938 204,106,057 GRMZM2G131280 platz5 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 13,553,048 13,555,243 GRMZM2G342691 platz6 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 152,864,604 152,869,253 GRMZM2G091044 platz7 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 157,531,940 157,533,735 GRMZM2G017882 platz8 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 85,901,285 85,902,702 GRMZM2G070295 platz9 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 95,257,993 95,259,419 GRMZM5G889467 plc1 Chr5 65,559,888 65,563,651 GRMZM2G054559 pld1 from: D73410 Chr3 12,195,404 12,200,349 GRMZM2G108912 pld10 Chen et al., 2016 Chr2 197,187,325 197,194,172 GRMZM2G140811 pld11 Chen et al., 2016 Chr7 175,225,393 175,232,833 GRMZM2G145944 pld12 Chen et al., 2016 Chr2 171,514,014 171,519,145 GRMZM2G066485 pld13 Chen et al., 2016 Chr6 138,879,310 138,901,971 GRMZM2G158008 pld14 Chr8 33,876,556 33,895,080 GRMZM2G312438 pld15 Chr1 4,034,105 4,039,749 GRMZM2G343588 pld16 Chr8 33,850,982 33,854,872 GRMZM5G865943 pld17 Chr5 70,898,275 70,901,412 GRMZM2G061969 pld2 Chen et al., 2016 Chr8 17,391,163 17,395,926 GRMZM2G438378 pld3 Chen et al., 2016 Chr6 128,905,006 128,908,832 GRMZM2G043340 pld4 Chen et al., 2016 Chr6 94,011,753 94,013,434 GRMZM2G442551 pld5 Chen et al., 2016 Chr9 90,709,327 90,713,727 GRMZM2G019029 pld6 Chen et al., 2016 Chr9 121,042,044 121,044,689 GRMZM2G179792 pld7 Chen et al., 2016 Chr1 67,777,685 67,781,676 GRMZM2G159125 pld8 Chen et al., 2016 Chr2 182,836,551 182,840,311 GRMZM2G133943 pld9 Chen et al., 2016 Chr1 80,976,254 80,982,317 GRMZM2G071450 ploc1 Chr6 54,372,730 54,374,538 GRMZM2G078409 ploc2 from sequence EU955234 Chr2 24,166,809 24,167,435 GRMZM2G037104 pls1 from: Z29518 Chr2 230,276,620 230,282,304 GRMZM5G878139 pls2 from: AI622087 Chr4 4,398,962 4,410,023 GRMZM2G101958 plt1 Classical Gene (from: J04176) Chr10 4,168,397 4,169,548 GRMZM2G010868 plt2 Classical Gene Chr3 230,694,240 230,696,031 GRMZM2G126397 plt3 Chr3 184,490,364 184,491,451 GRMZM2G174680 plt4 Chr1 52,623,482 52,624,713 GRMZM2G005991 plt5 Chr1 287,217,033 287,218,320 GRMZM2G116167 plt6 Chr5 60,007,150 60,008,477 GRMZM2G125356 pme1 Chr10 122,250,862 122,253,051 GRMZM2G046618 pme2 Hawkins et al., 2014 Chr9 11,632,550 11,635,276 GRMZM5G833389 pmg1 Classical Gene Chr8 170,315,932 170,320,657 GRMZM2G019260 pmk1 Chr1 34,940,742 34,950,638 GRMZM2G029824 pmp1 from Cell Genomics Project (Oct 2013) Chr1 3,701,760 3,704,275 GRMZM2G153369 pmpm2 from alignment to sequence in Fu et al (2012), and to accession EU959002 Chr2 199,044,953 199,046,279 GRMZM2G079306 pmpm3 aligns to cDNA EU962407 and to sequence file [Fu et al 2012) Chr9 12,875,822 12,883,410 GRMZM2G179462 pmpm4 from alignment to sequence file in Fu et al 2012, and to EU954642 Chr1 43,986,382 43,987,175 GRMZM2G477325 pmpm5 from alignment to sequence in Fu et al (2012), and to sequence accession EU975274 Chr7 168,441,642 168,442,771 GRMZM2G099984 pmpm7 from sequence in Fu et al (2012), and aligment to sequence accession EU955642 Chr8 853,213 853,915 GRMZM2G066870 pmpm8 aligns to sequence in Fu et al 2012, and to sequence accession EU971491 Chr3 49,118,179 49,119,770 GRMZM2G023422 pol1 Udy et al, 2012 Chr10 71,277,936 71,288,557 GRMZM2G114459 polm1 Chr1 2,088,572 2,102,312 GRMZM5G828278 polm2 Chr9 155,361,528 155,366,191 GRMZM5G844080 polm2 Chr9 155,371,097 155,373,747 Zm00001d048541 polm2 Chr9 158,173,924 158,186,211 GRMZM2G053588 polm3 Chr9 28,392,287 28,396,846 GRMZM2G153792 polm3 Chr9 28,406,066 28,413,513 Zm00001d045603 polm3 Chr9 28,436,212 28,457,275 GRMZM2G024823 pop1 from: EU961905 & Classical Gene Chr1 99,180,327 99,184,416 GRMZM2G155021 por1 from: X73429 Chr8 139,629,328 139,632,254 GRMZM2G125023 por2 from: AF326503 Chr10 139,149,943 139,152,962 GRMZM2G104394 pox1 from B73_v3 alignment sequence AJ401274 Chr3 59,039,454 59,047,011 GRMZM2G040638 pox2 B73_V3 reference genome alignment to sequence AJ401275.1 (MLS 2015) Chr1 63,648,608 63,650,100 GRMZM2G135108 pox3 from alignment of B73_V3 to sequence AJ401276.1 (MLS 20150) Chr6 125,194,486 125,196,087 GRMZM2G178074 ppck1 from B73_V2 aligment to sequence AY911413 Chr5 214,764,762 214,766,299 GRMZM2G135091 ppck2 B73_v2 alignment to sequence AY911414 Chr4 143,105,617 143,107,036 GRMZM2G096753 ppck3 from B73_v2 alignment to AY911415 Chr5 186,556,056 186,557,725 GRMZM2G049541 ppck4 from B73_V2 alignment to AY911416 Chr2 30,268,597 30,270,037 GRMZM6G924006 ppd1 Chr1 151,734,051 151,736,151 GRMZM2G326111 ppi1 from: BT042680 Chr5 167,791,848 167,793,057 GRMZM5G851266 ppo1 Chr10 59,669,631 59,671,907 GRMZM2G090718 ppp1 Classical Gene Chr5 210,643,769 210,647,890 GRMZM2G428579 ppr100 Chr9 118,298,087 118,300,177 GRMZM2G012174 ppr102 Chr3 200,829,117 200,833,808 GRMZM2G170896 ppr103 Hammani et al., 2016 Chr2 234,360,122 234,362,918 GRMZM2G099604 ppr13 Chr5 4,335,522 4,337,752 GRMZM2G050697 ppr152 from B73_v2 Chr3 206,557,927 206,560,435 GRMZM2G341621 ppr2 from B73_v2 alignment to cDNA EU956685 |gi| 195613945 (July 2011) Chr7 2,584,810 2,587,604 AC215198.3_FG002 ppr2263 from Sosso et al 2012 Chr9 12,723,540 12,725,903 GRMZM2G333678 ppr36 Chr4 15,638,404 15,640,330 Zm00001d026654 ppr4 no good match in v3; excellent hit in v4 Chr10 149,493,855 149,501,735 Zm00001d026654 ppr4 no good match in v3; excellent hit in v4 Chr10 149,493,959 149,499,804 GRMZM2G025409 ppr5 Classical Gene Chr4 181,456,446 181,458,981 GRMZM2G025409 ppr5 from alignment of B73_v2 to cDNA EU037901 | GI:154520280 (July 2011) Chr4 181,456,446 181,458,981 GRMZM2G337701 ppr521 Wei & Han, 2016 scaffold_498 111,300 114,195 GRMZM2G438524 ppr53 Zoschke et al., 2015 Chr1 299,484,354 299,486,920 GRMZM2G005938 ppr*-59040 Chr10 60,236,510 60,241,598 GRMZM2G093291 ppr6 Chr9 26,487,832 26,491,734 GRMZM2G341479 ppr61 Chr5 204,809,810 204,811,353 GRMZM2G475897 ppr*-GRMZM2G475897 Chr1 180,544,078 180,547,525 GRMZM2G164202 pprsmr4 Chr5 70,802,337 70,804,170 GRMZM2G047404 ppt1 from: U66403 Chr2 173,925,593 173,929,511 GRMZM2G103047 ppt2 from: U66404 Chr7 82,105,784 82,109,932 GRMZM2G025832 pr1 from B73_v2 alignment to GenBank locus HQ699781 Chr5 180,084,037 180,086,107 GRMZM2G120047 prc1 Classical Gene Chr6 81,137,995 81,139,170 GRMZM2G111566 prc2 from homology to Genbank sequence EU952592 Chr5 12,576,565 12,579,887 GRMZM2G472167 prc3 from homology to Genbank sequence EU957210 Chr1 8,552,957 8,556,040 GRMZM2G171604 prc4 from homology to Genbank sequence AY109445 Chr5 116,903,623 116,911,871 GRMZM2G049915 prcw1 from homology to Genbank sequence EU941682 Chr10 36,785,988 36,787,819 GRMZM2G079452 prda1 Belcher et al., 2015 Chr4 16,807,094 16,815,389 GRMZM2G072861 prep2 Chr5 209,718,873 209,720,882 GRMZM2G074361 prf1 Classical Gene Chr6 160,357,192 160,358,354 GRMZM2G109842 prf2 from: Entrez Gene 542410 Chr8 124,237,915 124,239,012 GRMZM5G876285 prf3 from: EU960514 Chr8 174,848,342 174,876,645 GRMZM5G877388 prf5 from: Entrez Gene 542625 Chr9 19,041,804 19,045,538 GRMZM2G112240 prh1 Classical Gene Chr4 170,944,444 170,947,965 GRMZM2G019819 prh10 Xiang, YL et al. 2016 Chr2 103,675,901 103,679,774 GRMZM2G159811 prh11 Xiang, YL et al. 2016 Chr10 101,377,174 101,382,475 GRMZM2G177386 prh12 Chr6 161,744,096 161,747,484 GRMZM2G134628 prh13 Xiang, YL et al. 2016 Chr3 220,928,320 220,934,085 GRMZM2G102255 prh14 Xiang, YL et al. 2016 Chr6 167,604,993 167,607,983 GRMZM2G383807 prh15 Xiang, YL et al. 2016 Chr8 77,501,631 77,504,702 GRMZM2G056572 prh16 Chr2 3,973,404 3,978,693 GRMZM2G164352 prh17 Wang et al., 2017 Chr6 64,676,766 64,683,561 GRMZM2G140288 prh2 From homology to genbank sequence BT068007 Chr7 167,183,707 167,192,292 GRMZM2G059453 prh3 Xiang, YL et al. 2016 Chr3 180,096,139 180,098,099 GRMZM2G166297 prh4 Xiang, YL et al. 2016 Chr8 168,030,486 168,032,471 GRMZM2G010855 prh5 Xiang, YL et al. 2016 Chr1 39,144,013 39,146,119 GRMZM2G308615 prh6 Xiang, YL et al. 2016 Chr7 89,059,718 89,061,311 GRMZM2G082487 prh7 Xiang, YL et al. 2016 Chr2 176,186,305 176,187,719 GRMZM2G122228 prh8 Xiang, YL et al. 2016 Chr3 212,913,668 212,919,667 GRMZM5G818101 prh9 Xiang, YL et al. 2016 Chr8 72,141,439 72,143,820 GRMZM2G119906 prin2 Williams-Carrier et al. 2014 Chr2 178,872,908 178,874,445 GRMZM2G162529 prk1 from Cell Genomics Project (Oct 2013) Chr5 199,643,154 199,645,484 GRMZM2G133919 prl1 Chr5 216,749,557 216,756,161 GRMZM2G409309 prm5 Olukolu, BA et al. 2016 Chr3 56,470,193 56,479,063 GRMZM2G375504 pro1 Wang et al., 2014 Chr8 95,226,658 95,237,335 GRMZM5G899080 propep1 B73_v2 model provided by A Huffaker Chr2 6,583,856 6,584,704 GRMZM2G339117 propep3 B73_v2 gene model provided by A Huffaker 5/2013 Chr2 6,597,929 6,598,629 GRMZM2G141133 propep4 B73_v2 gene model provided by A Huffaker 5/2013 Chr10 72,626,088 72,626,699 GRMZM2G141071 propep5 B73_v2 gene model provided by A Huffaker 5/2013 Chr10 72,636,057 72,636,866 AC205274.3_FG001 prp1 Classical Gene Chr8 51,816,721 51,817,224 GRMZM2G102356 prp2 Classical Gene Chr2 41,216,939 41,217,919 GRMZM2G117989 prp3 from: X82184 Chr4 9,662,595 9,664,016 GRMZM2G465226 prp4 from: U82200 Chr7 3,487,009 3,488,071 GRMZM2G402631 prp5 Christensen et al., 2015 Chr1 178,035,095 178,036,072 GRMZM2G039396 prpo1 from AF218052 alignment to B73_V3 Chr8 876,212 882,478 GRMZM2G364901 prpo2 from AF273767 alignment to B73_V2 Chr2 35,316,673 35,329,767 GRMZM2G320307 prr1 Chr5 201,317,849 201,326,036 GRMZM2G177792 prx35 Lopez-Castillo et al., 2015 Chr10 86,298,080 86,299,400 GRMZM5G849107 ps1 Classical Gene Chr5 100,737,438 100,739,288 GRMZM2G100976 psa1 Chr6 88,729,231 88,730,546 GRMZM2G021687 psa2 Fristedt et al., 2014 Chr1 197,879,675 197,881,628 GRMZM2G051403 psa3 Shen et al., 2017 Chr5 7,706,026 7,707,915 GRMZM2G012397 psa6 Entrez Gene 100286020 Chr7 5,134,217 5,135,120 GRMZM2G024150 psad1 from: AF147726 Chr5 3,530,018 3,531,150 GRMZM2G451224 psah1 From homology to Genbank accession AF052076 Chr6 164,173,766 164,175,105 GRMZM2G080107 psan1 From homology to Genbank sequence BT040227 Chr3 138,460,913 138,462,021 GRMZM2G102838 psb1 Belcher et al., 2015 Chr6 81,891,034 81,893,207 GRMZM2G033885 psb29 Entrez Gene 542478 Chr7 157,314,547 157,315,990 GRMZM2G174984 psb3 from: BT085953 Chr4 27,121,588 27,123,964 GRMZM5G834496 psbJ (cp) Wei & Han, 2016 ChrPt 63,347 63,469 GRMZM2G077333 psbs1 from: AY291061 Chr3 174,868,242 174,870,828 GRMZM2G438551 psei1 Classical Gene Chr3 187,772,204 187,778,415 GRMZM2G030717 psei10 Chr8 162,128,796 162,129,551 GRMZM2G012160 psei2 Classical Gene Chr8 170,965,314 170,968,006 GRMZM2G440968 psei3 Chr6 155,861,031 155,863,018 GRMZM2G013461 psei4 Chr8 3,347,946 3,350,818 GRMZM2G024264 psei5 Chr6 146,669,647 146,672,066 GRMZM2G401328 psei6 Chr1 79,139,823 79,140,627 GRMZM2G148925 psei7 Chr1 79,075,655 79,077,147 GRMZM2G401374 psei8 Chr1 79,147,344 79,148,016 AC196110.4_FG004 psei9 from alignment of cloning primers in van der Linde et al 2012 Chr4 15,343,574 15,344,100 GRMZM2G044194 psk1 from: BK000133 Chr7 3,025,543 3,026,306 GRMZM2G079290 psk2 Chr3 143,262,466 143,263,677 GRMZM2G084859 psk3 from: BK000135 Chr9 145,248,876 145,249,788 GRMZM2G031261 psk4 from: BK000136 Chr10 4,752,399 4,753,182 GRMZM2G149317 psy2 Chr8 167,823,550 167,826,600 Zm00001d021410 psy3 v4 Chr7 151,481,395 151,484,398 GRMZM2G091419 ptac10 from: AFW84282 Chr8 163,288,195 163,292,627 GRMZM5G897926 ptac12 from: BT042419 & Williams-Carrier et al. 2014 Chr3 193,671,883 193,678,209 GRMZM5G807767 ptac14 Belcher et al., 2015 Chr8 76,011,360 76,016,337 GRMZM2G180418 ptac17 Chr5 214,171,178 214,181,309 GRMZM2G306104 ptac18 Chr1 106,505,916 106,506,716 GRMZM2G122116 ptac2 from: DAA64282 Chr7 175,323,051 175,332,481 GRMZM2G024530 ptf1 Chr9 11,565,132 11,570,108 GRMZM2G050596 pth1 Chr3 206,596,608 206,608,212 GRMZM2G328785 ptk1 Classical Gene Chr6 133,823,627 133,826,469 GRMZM2G099754 ptk2 from: Entrez Gene 100283338 Chr4 185,250,108 185,255,064 GRMZM2G151216 ptk3 from alignment to GenBank acsession AF24304 to B73_V2 assembly Chr1 190,127,790 190,130,328 AC217842.3_FG001 ptk4 alignment of GenBank accession M62985 to B73_v2 Chr2 156,421,058 156,425,687 GRMZM2G473511 ptk5 from: AF100769 Chr8 9,436,053 9,438,289 GRMZM5G867390 ptr1 from Tnani et al 2013 Chr1 269,419,683 269,424,715 AC211276.4_FG008 pve1 from Zhang et al 2012 Chr5 16,435,871 16,436,953 GRMZM2G134947 px13 from: AF037031 and AF037033 Chr5 32,055,951 32,057,280 GRMZM2G108219 px14 from: Y13905 Chr2 25,437,820 25,439,417 GRMZM2G427815 px3 Chr7 172,809,274 172,811,080 GRMZM2G450233 px5 Chr6 125,337,844 125,340,176 GRMZM5G809292 pyg7 Chr7 145,184,348 145,188,920 GRMZM2G033526 pyk1 Chr1 97,682,229 97,687,870 GRMZM2G004534 pyk2 Chr10 4,697,235 4,702,142 GRMZM2G144730 pyk3 Pouvreau et al 2011 Chr9 113,493,606 113,499,029 GRMZM2G320099 pyrd1 from Husnain et al 2013 Chr1 3,704,159 3,706,769 GRMZM2G090068 pyrr1 Hasnain et al., 2013 Chr5 160,118,507 160,129,431 GRMZM2G007721 pza00048 Chr10 98,714,259 98,732,307 GRMZM2G121790 pza00067 Chr4 229,199,657 229,204,882 GRMZM2G040634 pza00111 Chr7 139,402,429 139,406,268 GRMZM2G314292 pza00131 Chr1 203,986,419 203,987,178 GRMZM2G104258 pza00132 Chr7 31,785,259 31,790,644 GRMZM2G110408 pza00152 Chr9 110,677,553 110,681,978 GRMZM2G012923 pza00270 Chr5 151,484,639 151,489,634 GRMZM2G364068 pza00271 Chr4 172,551,715 172,560,136 GRMZM2G142072 pza00285 Chr9 8,949,490 8,962,539 GRMZM2G022088 pza00297 Chr3 40,318,889 40,324,047 GRMZM2G002578 pza00316 Chr3 225,185,182 225,186,943 GRMZM2G011173 pza00332 Chr4 189,215,297 189,219,182 GRMZM2G153087 pza00363 Chr3 135,934,895 135,940,205 GRMZM2G118917 pza00381 Chr1 238,384,036 238,403,459 GRMZM2G122443 pza00413 Chr3 128,928,165 128,931,335 GRMZM2G434696 pza00424 Chr7 174,820,350 174,831,406 GRMZM2G002959 pza00473 Chr6 124,328,526 124,334,707 GRMZM2G047095 pza00495 Chr2 173,887,377 173,894,291 GRMZM2G101181 pza00497 Chr2 20,541,703 20,545,865 GRMZM2G152127 pza00538 Chr3 208,546,055 208,552,820 GRMZM2G164475 pza00667 Chr3 162,783,765 162,786,921 GRMZM2G049525 pza00726 Chr4 53,468,183 53,474,421 GRMZM2G030529 pza00752 Chr1 82,020,741 82,030,263 GRMZM2G081652 pza00783 Chr3 173,515,706 173,518,871 GRMZM2G101042 pza00793 Chr8 65,656,733 65,662,011 GRMZM2G313481 pza00818 Chr5 1,045,283 1,050,017 GRMZM2G031584 pza00827 Chr3 156,830,533 156,833,606 GRMZM2G054380 pza00838 Chr8 159,782,943 159,797,629 GRMZM2G089121 pza00944 Chr1 89,006,779 89,009,728 GRMZM2G038964 pza00978 Chr1 284,081,140 284,083,876 GRMZM2G072337 pza01089 Chr10 117,586,271 117,590,284 GRMZM2G041015 pza01154 Chr3 217,773,782 217,777,054 GRMZM2G102596 pza01272 Chr9 18,903,400 18,906,316 GRMZM2G089517 pza01304 Chr5 179,240,778 179,243,919 GRMZM2G061681 pza01360 Chr3 225,532,457 225,540,553 GRMZM2G059108 pza01396 Chr3 166,420,293 166,422,669 GRMZM2G103230 pza01527 Chr6 58,423,170 58,430,307 GRMZM2G403007 pza01552 Chr6 129,885,873 129,886,948 GRMZM2G044128 pza01623 Chr8 5,160,708 5,162,795 GRMZM2G112782 pza01677 Chr10 71,063,036 71,066,861 GRMZM2G168364 pza01714 Chr7 134,168,464 134,170,246 GRMZM2G061885 pza01735 Chr2 185,341,447 185,347,936 GRMZM2G305822 pza01791 Chr9 82,022,416 82,025,519 GRMZM2G001530 pza01877 Chr10 77,686,954 77,691,931 GRMZM2G118286 pza01883 Chr10 9,383,491 9,407,372 GRMZM2G068259 pza01921 Chr1 262,219,645 262,230,412 GRMZM2G054803 pza01936 Chr7 45,400,081 45,402,022 GRMZM2G115304 pza01946 Chr7 129,376,221 129,383,767 GRMZM2G165631 pza02040 Chr5 172,133,346 172,138,422 GRMZM2G087612 pza02044 Chr1 291,937,388 291,941,593 GRMZM2G023194 pza02128 Chr10 111,795,775 111,798,782 GRMZM2G369931 pza02182 Chr3 225,852,909 225,856,380 GRMZM2G150383 pza02266 Chr2 229,529,084 229,531,382 GRMZM2G088849 pza02291 Chr7 85,907,159 85,909,631 GRMZM2G125494 pza02337 Chr2 15,582,030 15,592,514 GRMZM2G455568 pza02344 Chr9 13,777,074 13,777,439 GRMZM2G467907 pza02365 Chr7 127,179,179 127,184,226 GRMZM2G158021 pza02373 Chr7 167,373,185 167,379,694 GRMZM2G072526 pza02386 Chr7 160,271,657 160,276,364 GRMZM2G081127 pza02388 Chr8 167,824 174,330 GRMZM2G110398 pza02402 Chr3 171,486,954 171,491,966 GRMZM2G098800 pza02411 Chr4 153,223,584 153,226,721 GRMZM2G073199 pza02421 Chr4 199,962,521 199,966,536 GRMZM2G000660 pza02423 Chr3 230,830,536 230,833,871 GRMZM2G054050 pza02427 Chr3 24,354,426 24,358,548 GRMZM2G005346 pza02450 Chr2 47,788,105 47,793,199 GRMZM2G070639 pza02457 Chr4 29,197,166 29,201,100 GRMZM2G072658 pza02462 Chr5 6,866,349 6,870,062 GRMZM2G106218 pza02472 Chr6 149,672,083 149,678,650 GRMZM2G141760 pza02478 Chr6 141,098,824 141,107,819 GRMZM2G026442 pza02479 Chr4 213,260,027 213,287,363 GRMZM2G013981 pza02480 Chr5 215,883,771 215,886,889 GRMZM2G119104 pza02487 Chr1 22,583,820 22,595,788 GRMZM2G114444 pza02514 Chr3 218,561,885 218,567,450 GRMZM2G104658 pza02527 Chr10 148,410,228 148,419,253 GRMZM2G325762 pza02549 Chr2 107,818,821 107,820,874 GRMZM2G152007 pza02554 Chr10 2,454,333 2,457,858 GRMZM2G073750 pza02619 Chr3 123,881,899 123,888,098 GRMZM2G116434 pza02676 Chr5 60,798,603 60,803,937 GRMZM2G372180 pza02727 Chr2 231,598,423 231,605,113 GRMZM2G410479 pza02791 Chr1 67,529,480 67,539,492 GRMZM2G102845 pza02818 Chr5 78,415,886 78,423,936 GRMZM2G465169 pza02861 Chr9 43,841,651 43,847,738 GRMZM2G163769 pza02939 Chr2 160,620,927 160,623,348 GRMZM2G106590 pza02941 Chr10 71,371,828 71,375,270 GRMZM2G137930 pza02948 Chr6 35,680,636 35,684,873 GRMZM2G068028 pza02957 Chr1 282,860,846 282,864,657 GRMZM2G181251 pza02961 Chr10 16,210,496 16,218,008 GRMZM2G129675 pza02982 Chr4 149,303,644 149,309,556 GRMZM2G100716 pza02992 Chr4 150,491,358 150,496,840 GRMZM2G099186 pza03047 Chr6 31,411,941 31,415,710 GRMZM2G058252 pza03049 Chr5 89,351,903 89,357,717 GRMZM2G018619 pza03057 Chr9 77,764,194 77,768,544 GRMZM2G037140 pza03063 Chr6 35,896,141 35,897,813 GRMZM2G126361 pza03069 Chr6 83,126,966 83,131,041 GRMZM2G003883 pza03070 Chr3 44,224,072 44,229,612 GRMZM2G080917 pza03073 Chr3 170,149,613 170,154,226 GRMZM2G106424 pza03081 Chr4 209,972,408 209,975,654 GRMZM2G130927 pza03092 Chr5 12,044,175 12,049,812 GRMZM2G102790 pza03120 Chr6 57,696,052 57,697,795 GRMZM2G048295 pza03121 Chr2 30,170,679 30,172,939 GRMZM2G143328 pza03146 Chr3 215,930,994 215,932,039 GRMZM2G111045 pza03152 Chr4 147,942,670 147,945,039 GRMZM2G088783 pza03154 Chr3 204,223,730 204,225,741 GRMZM2G159547 pza03167 Chr5 208,398,128 208,399,748 GRMZM2G070849 pza03168 Chr1 51,395,397 51,397,668 GRMZM2G096358 pza03178 Chr8 11,486,302 11,488,135 GRMZM2G003406 pza03182 Chr8 153,001,174 153,002,887 GRMZM2G139688 pza03191 Chr3 187,060,539 187,064,561 GRMZM2G131937 pza03193 Chr1 212,948,280 212,949,607 GRMZM2G173633 pza03196 Chr10 124,346,736 124,348,421 GRMZM2G111117 pza03203 Chr4 82,918,804 82,920,269 GRMZM2G017268 pza03205 Chr4 197,249,760 197,251,014 GRMZM2G070523 pza03226 Chr5 20,219,035 20,221,972 GRMZM2G048136 pza03227 Chr4 1,269,236 1,270,429 GRMZM2G053720 pza03240 Chr1 88,349,118 88,351,781 GRMZM2G107867 pza03243 Chr1 44,371,887 44,378,439 GRMZM2G365423 pza03254 Chr4 65,845,329 65,852,416 GRMZM2G070523 pza03274 Chr5 20,219,035 20,221,972 GRMZM2G176175 pza03344 Chr7 22,015,365 22,026,546 GRMZM2G372398 pza03344 Chr1 36,501,767 36,518,959 GRMZM2G028037 pza03391 Chr3 221,519,554 221,524,903 GRMZM2G020409 pza03409 Chr4 129,844,141 129,848,910 GRMZM2G407044 pza03459 Chr4 135,184,888 135,190,339 GRMZM2G465169 pza03469 Chr9 43,841,651 43,847,738 GRMZM2G472703 pza03491 Chr10 36,254,235 36,258,217 GRMZM2G077197 pza03527 Chr3 5,983,469 5,988,309 GRMZM2G112165 pza03529 Chr2 190,093,038 190,097,209 GRMZM2G024668 pza03531 Chr1 184,272,689 184,277,348 GRMZM2G156105 pza03536 Chr4 108,960,369 108,961,386 GRMZM2G065599 pza03612 Chr8 129,490,869 129,493,053 GRMZM2G077361 pza03723 Chr7 45,162,309 45,167,457 GRMZM2G048170 pza03728 Chr7 142,818,487 142,819,699 GRMZM2G084465 pza03733 Chr3 182,334,242 182,336,143 GRMZM2G084465 pza03735 Chr3 182,334,242 182,336,143 GRMZM2G107867 pza03742 Chr1 44,371,887 44,378,439 GRMZM2G164400 pza03747 Chr2 7,519,489 7,528,034 GRMZM2G024973 pzb00079 Chr5 11,793,473 11,795,945 GRMZM2G104262 pzb00093 Chr4 124,002,463 124,006,407 GRMZM2G102161 pzb00221 Chr9 146,936,987 146,945,281 GRMZM2G145041 pzb00232 Chr5 64,145,458 64,148,638 GRMZM2G143955 pzb00752 Chr7 136,898,993 136,902,620 GRMZM2G022558 pzb00761 Chr9 87,869,349 87,871,737 GRMZM2G126988 pzb00869 Chr5 33,070,313 33,085,769 GRMZM2G080054 pzb00901 Chr2 9,449,250 9,451,125 GRMZM2G090905 pzb00942 Chr6 144,755,799 144,758,179 GRMZM2G365961 pzb01009 Chr6 85,959,826 85,961,557 GRMZM2G002652 pzb01021 Chr4 210,865,185 210,868,144 GRMZM2G171707 pzb01103 Chr2 203,572,465 203,578,306 GRMZM2G082855 pzb01110 Chr9 24,074,354 24,081,173 GRMZM2G016939 pzb01111 Chr10 134,434,838 134,438,537 GRMZM2G020366 pzb01112 Chr5 69,147,384 69,150,733 GRMZM2G474685 pzb01227 Chr1 289,615,706 289,619,063 GRMZM2G047448 pzb01233 Chr2 3,392,385 3,393,860 GRMZM2G046284 pzb01301 Chr10 10,198,909 10,200,857 GRMZM2G090905 pzb01308 Chr6 144,755,799 144,758,179 GRMZM2G313162 pzb01358 Chr9 111,007,594 111,013,702 GRMZM2G107629 pzb01647 Chr1 231,759,993 231,766,222 GRMZM2G102347 pzb01662 Chr1 34,409,866 34,413,485 GRMZM2G079823 pzb01957 Chr1 26,198,119 26,204,511 GRMZM2G058745 pzb02155 Chr8 124,182,497 124,187,982 GRMZM2G471529 pzb02179 Chr3 158,932,008 158,938,325 GRMZM2G087233 qm1 Classical Gene Chr5 19,458,986 19,461,229 GRMZM2G113216 qsox1 Chr6 163,118,403 163,123,994 GRMZM5G822829 r1 Classical Gene Chr10 138,489,998 138,498,818 GRMZM2G003927 ra1 Classical Gene Chr7 110,359,182 110,359,930 AC233943.1_FG002 ra2 Classical Gene Chr3 12,890,068 12,890,853 AC233943.1_FG002 ra2 less than 1/3 of gene based on alignment with cDNA BT035538 GI:194692917 and genomic sequence DQ327701.1 (Jul 2011) Chr3 12,890,068 12,890,853 GRMZM2G014729 ra3 Classical Gene Chr7 166,895,789 166,900,274 GRMZM2G165901 rab15 Classical Gene Chr5 14,084,193 14,085,595 GRMZM2G091535 rab28 chr 5 hit Chr5 5,622,016 5,622,902 GRMZM2G472236 rab30 Chr1 12,246,354 12,247,358 GRMZM2G038032 rack1 receptor for activated C kinase; from: Wang B et al 2014 Chr6 163,078,693 163,081,080 GRMZM2G040477 rack2 receptor for activated C kinase; chr 8 paralog; from: Wang B et al 2014 Chr8 65,264,847 65,267,084 Zm00001d053917 rad1 Chr4 243,631,001 243,639,724 GRMZM2G121543 rad51a Zhang et al., 2014 Chr7 160,178,520 160,182,662 GRMZM2G084762 rad51b Zhang et al., 2014 Chr3 135,467,784 135,471,240 GRMZM2G123089 rad51c Zhang et al, 2014 Chr3 220,254,011 220,258,502 GRMZM2G055464 rad51d Zhang et al, 2014 Chr7 170,060,949 170,067,054 AC219006.2_FG007 rad51e Zhang et al, 2014 Chr8 131,503,426 131,513,533 GRMZM2G457621 raf1 Feiz et al., 2012 Chr2 1,361,783 1,363,354 GRMZM2G139123 raf2 Feiz et al., 2014 Chr1 295,100,635 295,101,482 GRMZM2G700665 rap2 Chr8 131,576,889 131,580,316 GRMZM2G048067 raptor1 Chr10 1,411,349 1,423,184 GRMZM2G330430 ras1 from Cell Genomics Project Chr2 40,054,092 40,056,877 GRMZM2G144008 ras11B2 Chr5 2,259,767 2,263,658 GRMZM2G019119 ras11E2 Chr2 172,384,492 172,387,622 GRMZM2G176677 ras18A1 from: BT087588 Chr2 27,056,209 27,064,181 GRMZM2G173878 ras2 Chr10 124,319,406 124,322,173 GRMZM2G149847 ras8B1 Chr2 233,015,891 233,019,721 GRMZM2G316113 rbap1 chr 8 gene model better sequence match (M Schaeffer Dec 2012) Chr8 153,994,750 154,008,418 GRMZM2G316113 rbap1 Classical Gene Chr8 153,994,750 154,008,418 GRMZM2G137965 rbap2 best match to nfc101 sequence AY10048 Chr3 204,143,323 204,150,370 GRMZM2G093815 rbd1 Chr7 11,492,262 11,493,481 GRMZM2G426953 rboh1 from DQ855284 Chr3 182,095,773 182,101,296 GRMZM2G138152 rboh2 covers a gap in B73_v2 assembly Chr3 200,364,162 200,384,941 GRMZM2G043435 rboh3 covers a gap in B73_v2 Chr6 160,040,811 160,052,133 GRMZM2G441541 rboh4 from EF364442 Chr4 191,928,760 191,933,957 GRMZM2G162200 rca1 from: W21622 Chr4 693,736 696,087 GRMZM2G162200 rca2 from: AF305876 Chr4 693,736 696,087 GRMZM2G162282 rca3 from: JX863889 Chr4 691,410 693,139 GRMZM2G302245 rcc1 Zheng et al., 2016 Chr3 179,842,136 179,848,015 GRMZM2G003565 rcc2 Zheng et al., 2016 Chr2 49,685,916 49,690,865 GRMZM2G135770 rcc3 Zheng et al., 2016 Chr4 81,813,738 81,819,034 GRMZM2G074850 rcp1 from BT056139 Chr6 68,972,623 68,974,546 GRMZM2G097316 rcph1 from: AB021175 Chr3 145,514,689 145,516,008 GRMZM2G146502 rcph2 from: AB021176 Chr4 188,242,843 188,244,300 GRMZM2G082437 rdr6 Petsch et al., 2015 Chr3 102,502,867 102,504,039 GRMZM2G145201 rdr6 Petsch et al., 2015 Chr3 102,532,883 102,536,036 GRMZM2G092001 reas1 Qi et al., 2015 Chr6 154,250,528 154,251,027 GRMZM2G042992 rel2 Classical Gene Chr10 76,650,034 76,659,099 GRMZM2G107774 rem6.3 Jamann et al., 2016 Chr1 25,392,624 25,395,149 GRMZM2G058675 rf2 Classical Gene Chr9 34,129,753 34,143,728 GRMZM2G086934 rfa1 Chr9 147,128,364 147,131,996 Zm00001d037540 rfz1 Chr6 128,726,080 128,728,807 GRMZM2G020187 rgd1 Classical Gene Chr6 17,165,517 17,171,948 GRMZM5G892991 rgd2 v2; from GQ918490 (Schnable & Lyons, 2011); was GRMZM2G365589 in v1; Douglas et al. 2010 Chr1 75,636,094 75,640,439 GRMZM2G128228 rgh3 B73_v2 fragments gene into GRMZM2G128228 and GRMZM5G849788 (from Mark Settle, 4/2013) Chr5 173,740,449 173,741,941 GRMZM5G849788 rgh3 B73_v2 fragments gene into GRMZM5G849788 and GRMZM2G128228 (from Mark Settles, 4/2013) Chr5 173,803,063 173,806,170 GRMZM2G093186 rgp2 Chr8 90,299,372 90,301,852 GRMZM2G415491 rh3 From Askura et al 2012 Chr5 1,933,220 1,947,556 AC198418.3_FG005 rh4 B73_v2 gene model corresponds to B73_v1 GRMZM2G163072 (maizesequence.org); was GRMZM2G163072 in B73_v1, not in B73_v2; from Asakura et al 2012 Chr1 295,187,054 295,270,267 GRMZM2G024690 rhcp1 Li et al., 2017 Chr5 11,830,175 11,839,047 GRMZM2G131254 rhn1 Chr1 179,371,866 179,374,965 GRMZM2G106960 ric1 Chr8 136,938,104 136,941,568 GRMZM2G049155 rif1 Chr7 74,139,858 74,148,720 GRMZM2G063536 rip1 Chr8 108,689,439 108,690,609 GRMZM2G119705 rip2 Chr7 162,849,640 162,851,038 GRMZM2G162748 ris1 from: Entrez Gene 100273354 Chr5 142,748,781 142,750,441 GRMZM2G038365 ris2 from: W49887 (chr 4 hit) Chr4 226,804,999 226,807,042 GRMZM2G109987 rld1 Classical Gene Chr9 154,912,262 154,920,527 GRMZM2G042250 rld2 from: DQ286526 Chr1 2,791,599 2,798,512 GRMZM2G087628 rlsb1 Bowman et al., 2013 Chr3 221,649,770 221,652,972 GRMZM2G546254 rlsb2 From sequence in Yerramsetty et al., 2016 Chr6 161,543,914 161,548,356 GRMZM2G154946 rmr1 Classical Gene Chr6 144,471,007 144,478,241 GRMZM2G009208 rmr2 from Barbour et al., 2012 Chr2 22,729,494 22,732,649 GRMZM2G007681 rmr6 from GenBank FJ426107 Chr1 188,753,176 188,845,235 GRMZM2G035820 rnc1 Classical Gene Chr3 187,230,808 187,235,487 GRMZM2G035820 rnc1 from alignment with cDNA EF650835|gi|149980666 to B73_v2 (Jul 2011) Chr3 187,230,808 187,235,487 GRMZM2G158835 rnp1 Chr7 167,862,249 167,864,329 GRMZM2G100639 roa1 Chr6 153,935,909 153,940,922 GRMZM2G415327 rop1 Entrez Gene 541773 Chr5 206,201,286 206,210,007 GRMZM5G846811 rop2 Classical Gene Chr4 238,592,881 238,596,701 GRMZM5G846811 rop2 from alignment on B73_v2 by mRNA seqence AF126053.2 Chr4 238,592,881 238,596,701 GRMZM2G100505 rop3 Chr6 133,009,256 133,012,520 GRMZM2G375002 rop4 Chr5 217,656,047 217,664,941 GRMZM2G102946 rop5 Chr9 3,063,132 3,080,500 GRMZM2G176217 rop6 from Entrez Gene 542017 Chr6 158,645,247 158,647,592 AC209819.3_FG012 rop7 Chr8 122,478,251 122,480,444 GRMZM2G001953 rop8 from: AF376054 Chr4 182,363,663 182,367,487 GRMZM5G803949 rop9 AY163377, mRNA alignment to B73_v2 (Nov 2011) Chr5 70,912,027 70,915,976 AC152495.1_FG002 rp1 Classical Gene Chr10 3,283,523 3,287,419 AC230011.2_FG002 rp3 From homology to genbank accession AF489541 Chr3 113,913,960 113,920,267 GRMZM2G172883 rpd3 from: AF035815 Chr4 231,335,846 231,342,828 GRMZM2G345039 rph1 from: Entrez gene 100192964 Chr8 67,242,630 67,250,938 GRMZM2G467086 rpl10 Chr3 229,627,953 229,630,162 GRMZM2G180724 rpl15b Chr7 149,310,459 149,313,123 GRMZM2G119169 rpl17a Entrez Gene Chr8 92,685,793 92,690,815 GRMZM2G702426 rpl17b Entrez Gene & Classical Gene & BT060719 Chr4 44,088,617 44,091,066 GRMZM2G148744 rpl17c Chr1 193,824,436 193,827,413 GRMZM2G171444 rpl19 Chr5 190,804,914 190,807,760 GRMZM2G028216 rpl29 Chr4 180,610,547 180,612,241 GRMZM2G027728 rpl30 Chr8 2,349,748 2,352,938 GRMZM2G145758 rpl32 Chr2 44,796,341 44,798,676 GRMZM2G043279 rpl35 Chr5 163,150,789 163,153,241 GRMZM2G100467 rpl39 Chr5 213,868,446 213,869,401 GRMZM2G157007 rpl40 Chr8 1,830,837 1,832,237 GRMZM2G009412 rpl44 Chr7 153,856,520 153,858,758 GRMZM5G815894 rpl5a Chr3 168,275,428 168,278,435 GRMZM2G163081 rpl5b Chr8 163,737,203 163,740,608 GRMZM2G174919 rpl7 from: EU951421 Chr2 135,231,574 135,241,133 GRMZM2G018080 rplp1 Missannotation: A putative gene missannotation (split gene) has been identified for this gene model using Compara homology predictions. Chr1 11,692,597 11,694,219 GRMZM2G315806 rplp1 Missannotation: A putative gene missannotation (split gene) has been identified for this gene model using Compara homology predictions. Chr1 11,687,866 11,691,260 GRMZM2G115564 rpo2 from: AF127022 Chr9 105,489,333 105,500,736 GRMZM2G381395 rpot1 Classical Gene Chr7 166,160,578 166,175,495 GRMZM5G895282 rps1 from: CX129574 Chr7 16,680,018 16,682,350 GRMZM2G095511 rps10 Chr1 274,598,475 274,600,271 GRMZM2G019325 rps11 Classical Gene Chr10 141,493,143 141,495,837 GRMZM2G063340 rps12 from: EU962633 Chr7 21,287,558 21,290,256 GRMZM2G158034 rps13 from: X62455 Chr4 37,626,157 37,628,934 GRMZM2G448511 rps15 Chr5 15,590,888 15,591,710 GRMZM2G093574 rps21a from BT062080 Chr6 137,097,719 137,100,951 GRMZM2G067303 rps22a Chr9 142,752,102 142,755,422 GRMZM2G091383 rps24 from: EU953725 Chr5 151,669,661 151,671,447 GRMZM2G084868 rps25 from: EU957298 Chr4 51,745,820 51,747,254 GRMZM2G066222 rps27 Chr4 218,054,500 218,057,037 GRMZM2G377600 rps27b from: AY106437 Chr5 160,795,273 160,797,497 GRMZM2G132121 rps27c from: DQ245897 Chr5 7,529,197 7,531,742 GRMZM2G099352 rps3 Chr10 75,709,393 75,711,864 GRMZM2G125271 rps4 from: AF013487 Chr5 1,489,127 1,491,854 GRMZM2G156673 rps5 from: AY103625 Chr8 6,591,423 6,593,377 GRMZM2G054136 rps6 Chr7 166,416,769 166,429,948 GRMZM2G336875 rps8 from: M95064 Chr4 232,843,893 232,846,622 GRMZM5G845244 rps8 (cp) Wei & Han. 2016 ChrPt 78,488 78,898 GRMZM2G003043 rrb1 Classical Gene Chr2 224,644,895 224,652,148 GRMZM2G153150 rrb2 Chr4 192,376,709 192,383,877 GRMZM2G033828 rrb3 from: EU945294 Chr1 196,158,449 196,165,691 GRMZM5G868908 rrph1 from NM_001159033.1 in Wang et al 2014 Chr5 169,710,822 169,727,140 GRMZM2G028041 rs1 assigned by the Grassius project, (Yilmaz et al 2009) to hb132 Chr7 3,667,975 3,674,168 GRMZM2G028041 rs1 Classical Gene Chr7 3,667,975 3,674,168 GRMZM2G403620 rs2 Classical Gene Chr1 154,968,134 154,972,600 AC149818.2_FG009 rtcl1 based on sequence homology to rtcs1 Chr9 152,747,407 152,748,234 GRMZM2G092542 rtcs1 Classical Gene Chr1 10,824,798 10,826,042 GRMZM2G092542 rtcs1 from Muthreich et al 2013 Chr1 10,824,798 10,826,042 GRMZM2G166159 rte1 Chatterjee et al., 2014 Chr1 149,321,818 149,326,540 GRMZM2G082203 rte2 Chr3 128,114,749 128,119,422 GRMZM2G051753 rte3 Chr3 10,940,297 10,946,516 GRMZM2G374989 rte4 Chr9 153,707,451 153,713,896 GRMZM2G302559 rte5 Chr3 183,092,037 183,096,804 GRMZM2G454327 rte6 Chr8 79,458,103 79,458,955 GRMZM2G099056 rth1 Classical Gene Chr1 253,953,554 253,966,804 GRMZM2G377215 rth3 Classical Gene Chr1 47,509,017 47,511,525 GRMZM2G436299 rth6 Chr1 104,617,335 104,621,459 GRMZM5G832994 rtl1 from: NM_001151994 Chr8 154,129,622 154,132,963 GRMZM2G077293 rtl2 from: BT036282 Chr3 203,830,116 203,833,100 GRMZM2G121208 rtl3 from: ACN37097 Chr6 161,903,231 161,906,492 GRMZM2G039592 rtl4 from: NM_001150599 Chr1 288,924,643 288,926,264 GRMZM2G017557 rtp1 Classical Gene Chr4 11,930,712 11,932,207 GRMZM2G163848 rul1 Chr8 150,095,586 150,100,818 GRMZM2G037368 rum1 From von Behrens et al 2011 Chr3 209,176,237 209,179,599 GRMZM2G019919 rws1 from: AF533364 Chr2 21,882,159 21,886,917 GRMZM2G334584 rxo1 Chr6 8,100,151 8,105,044 GRMZM2G134980 rz474a(dnaj) Chr5 16,340,013 16,344,789 GRMZM2G113295 rzfl1 Chr9 147,635,621 147,639,545 GRMZM2G056929 s1fa1 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 59,385,197 59,387,466 GRMZM5G852502 sacd1 From aa sequence in Du et al., 2016 Chr3 160,709,513 160,714,196 GRMZM2G119305 sacd10 Han et al., 2016 Chr10 61,689,660 61,692,217 AC215690.3_FG002 sacd11 Chr10 106,806,918 106,810,315 GRMZM2G180399 sacd2 from DQ192663 (sequence from Du et al., 2016) Chr8 161,386,924 161,390,467 GRMZM2G143625 sacd3 Chr1 107,371,746 107,373,355 GRMZM2G003368 sacd4 Han et al., 2016 Chr1 120,854,790 120,856,675 GRMZM2G026793 sacd5 Han et al., 2016 Chr2 74,671,225 74,675,172 GRMZM2G027673 sacd6 Han et al., 2016 Chr4 102,114,754 102,116,797 GRMZM2G073540 sacd7 Han et al., 2016 Chr5 48,865,287 48,866,779 GRMZM5G883417 sacd8 Han et al., 2016 Chr7 136,213,370 136,214,936 GRMZM2G316362 sacd9 Han et al., 2016 Chr8 164,731,500 164,733,879 GRMZM2G014376 sad1 from: Entrez Gene 100191894 Chr10 25,983,459 25,988,271 GRMZM2G042639 saf1 Chr1 43,124,855 43,126,948 GRMZM2G117935 sal1 Classical Gene Chr9 95,580,781 95,583,611 GRMZM2G125635 sam1 Chr10 128,008,870 128,011,887 GRMZM2G154397 sam2 Classical Gene Chr2 33,120,217 33,123,687 GRMZM2G038356 sar1 Classical Gene Chr3 63,530,359 63,532,921 GRMZM2G069203 sat1 from: AF453837 Chr8 155,020,473 155,021,850 GRMZM2G013430 sat2 from: AF453838 Chr1 24,049,836 24,051,294 GRMZM5G816110 sat3 from: AF453836 Chr6 159,594,188 159,596,729 GRMZM2G466908 saur1 Chr6 86,723,314 86,724,099 GRMZM2G088753 sbe1 Classical Gene Chr5 63,346,023 63,352,952 GRMZM2G073054 sbe3 Classical Gene Chr2 59,216,710 59,226,937 GRMZM2G113470 sbip1a Chr4 9,896,475 9,902,642 GRMZM2G060922 sbip1b Chr8 106,815,228 106,820,100 GRMZM2G175038 sbip2a from: Entrez gene 542646 Chr1 52,193,686 52,196,261 GRMZM2G111136 sbp1 from: AJ011614 & assigned by the Grassius project to sbp10 (Yilmaz et al 2009) Chr5 88,828,896 88,831,814 GRMZM2G109354 sbp11 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 106,259,354 106,278,403 GRMZM2G126827 sbp12 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 86,820,671 86,824,256 GRMZM2G113779 sbp13 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 202,626,703 202,628,534 GRMZM2G169270 sbp16 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 189,617,226 189,623,070 GRMZM2G156756 sbp17 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 295,502,079 295,509,029 GRMZM2G371033 sbp18 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 161,072,193 161,075,285 GRMZM2G163813 sbp19 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 236,142,134 236,146,366 GRMZM2G168229 sbp2 from: AJ011615; assigned by the Grassius project to sbp26 (Yilmaz et al 2009) Chr4 235,838,405 235,842,060 GRMZM2G065451 sbp20 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 238,318,275 238,321,628 GRMZM2G148467 sbp21 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 139,106,686 139,109,641 GRMZM5G878561 sbp22 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 159,420,552 159,425,244 GRMZM2G126018 sbp23 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 190,489,085 190,493,109 GRMZM2G133646 sbp24 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 50,944,910 50,952,180 GRMZM2G414805 sbp25 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 58,084,257 58,088,916 GRMZM2G097275 sbp27 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 77,973,223 77,978,271 GRMZM2G058588 sbp28 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 145,726,895 145,730,461 GRMZM2G067624 sbp29 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 151,254,398 151,256,086 GRMZM2G101499 sbp3 from: AJ011616 & assigned by the Grassius project to sbp14 (Yilmaz et al 2009) Chr6 95,232,272 95,235,580 GRMZM2G156621 sbp31 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 131,224,969 131,228,486 GRMZM2G106798 sbp3 (GRASSIUS) assigned by the Grassius project, (Yilmaz et al 2009) Chr4 17,511,896 17,523,810 Zm00001d046906 sbp4 v4 Chr9 109,930,589 109,934,102 GRMZM2G110742 sbp4 (GRASSIUS) assigned by the Grassius project, (Yilmaz et al 2009) Chr7 57,077,560 57,082,391 GRMZM2G061734 sbp5 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 192,807,845 192,812,893 GRMZM2G138421 sbp6 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 1,846,096 1,853,085 GRMZM2G098557 sbp7 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 200,132,272 200,137,588 GRMZM2G081127 sbp9 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 167,824 174,330 GRMZM2G437435 sbt1 Lopez et al., 2016 Chr10 15,035,904 15,038,278 GRMZM2G039538 sbt2 Lopez et al., 2016 Chr2 207,706,084 207,708,708 GRMZM2G363552 sbt3 Lopez et al., 2016 Chr7 160,351,370 160,353,986 GRMZM2G332976 sca1 from: EU965612 (Ma et al, 2015) Chr5 3,146,074 3,147,825 GRMZM2G028393 sci1 Classical Gene Chr8 133,996,633 133,997,534 GRMZM2G023872 scl1 Chr8 72,494,685 72,496,501 GRMZM2G075676 scp1 from JF682634 Chr10 120,298,584 120,303,328 GRMZM2G131516 scro1 from AF263457 Chr4 185,481,408 185,484,991 GRMZM2G121074 sda1 Leiboff et al., 2015 Chr2 7,661,318 7,666,576 AC233961.1_FG001 sdg101 Chr7 20,255,014 20,257,584 GRMZM2G147619 sdg102 Chr2 52,449,235 52,456,233 GRMZM2G074094 sdg103 Chr1 220,057,560 220,061,382 GRMZM2G021044 sdg104 Chr2 21,907,392 21,910,615 GRMZM2G140577 sdg105 Chr8 119,356,309 119,359,897 GRMZM2G409213 sdg106 Chr2 198,768,364 198,773,099 GRMZM2G357972 sdg107 Chr2 26,628,794 26,633,078 GRMZM2G149153 sdg108 Chr4 29,377,433 29,389,813 GRMZM2G130910 sdg110a Chr7 84,870,169 84,881,375 GRMZM2G033694 sdg110b Chr2 174,419,091 174,436,402 GRMZM2G117458 sdg111 Chr6 155,657,316 155,676,425 GRMZM2G139710 sdg113 Chr3 187,087,134 187,091,766 GRMZM2G033350 sdg115 Chr3 213,339,505 213,342,831 GRMZM2G105869 sdg116 Chr2 200,042,816 200,045,662 GRMZM2G172427 sdg117 Chr4 160,952,067 160,967,258 GRMZM2G054380 sdg118 Chr8 159,782,943 159,797,629 GRMZM2G300955 sdg119 Chr2 177,370,536 177,375,918 GRMZM2G091916 sdg122 Chr1 14,508,652 14,510,556 GRMZM2G080462 sdg123 from: Entrez Gene 542096 Chr1 242,199,385 242,208,360 GRMZM2G473138 sdg127 Chr10 4,018,763 4,022,973 GRMZM2G013794 sdg128 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 72,261,177 72,305,728 GRMZM2G305124 sdg129 Chr5 71,873,816 71,875,082 GRMZM2G457881 sdg130 Chr5 11,957,842 11,966,150 GRMZM2G034288 sdg136 Chr7 38,217,966 38,231,106 GRMZM2G025924 sdg137 Chr2 170,175,284 170,177,778 GRMZM2G164277 sdg140 Chr2 7,527,529 7,531,928 GRMZM2G164400 sdg140 Chr2 7,519,489 7,528,034 AC217415.3_FG004 se1 Haro von Mogel, 2014 Chr2 230,653,379 230,653,900 GRMZM2G081626 see2a from: AJ131718 Chr8 137,286,214 137,293,588 GRMZM2G093032 see2b from: AF082347 Chr3 225,910,755 225,916,465 GRMZM2G169160 ser2 from: Y13053 Chr4 5,670,956 5,682,556 GRMZM5G870959 serk1 gene model GRMZM2G043670 on RefGen_v1 corresponds to the gene model GRMZM5G870959 on RefGen_v2. Chr10 121,772,419 121,777,860 GRMZM2G115420 serk2 Chr5 176,261,637 176,267,226 GRMZM2G150024 serk3 Chr4 124,660,672 124,667,062 GRMZM2G147424 sfb1 from: EU959706 and assigned by the Grassius project, (Yilmaz et al 2009) to s1fa2 Chr10 113,732,417 113,734,756 GRMZM2G159632 sfp1 from: AF355602 Chr1 24,403,203 24,407,782 GRMZM2G123159 sgb102 Chr1 264,230,117 264,233,270 GRMZM2G074082 sgo1 Classical Gene Chr7 18,531,204 18,535,522 GRMZM2G074082 sgo1 from B73_v2 alignment to cDNA AY964185 | 63099688 Chr7 18,531,204 18,535,522 GRMZM2G089713 sh1 Classical Gene Chr9 11,500,926 11,507,687 GRMZM2G089713 sh1 Chr9 11,500,926 11,507,687 GRMZM2G429899 sh2 Classical Gene Chr3 216,495,981 216,505,345 GRMZM2G429899 sh2 Chr3 216,495,981 216,505,345 GRMZM6G741210 shbp1 from: W21734 (v3) Chr3 178,865,444 178,897,469 GRMZM2G399073 shpl1 from: BT055135 Chr5 61,555,816 61,564,735 GRMZM2G139073 si1 Classical Gene Chr6 84,949,624 84,954,298 GRMZM2G149481 si606065d12 Chr1 33,322,465 33,326,460 GRMZM2G082007 si683005e02 Chr4 169,989,717 169,993,675 GRMZM2G378452 si946003e12 Chr3 23,844,186 23,847,768 GRMZM2G176175 sid1 from: FJ686697 Chr7 22,015,365 22,026,546 GRMZM2G100086 sig1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 39,680,080 39,682,830 GRMZM2G006736 sig1A from: AF058708 (chr 10 hit) Chr10 75,590,751 75,594,655 GRMZM2G543629 sig1B Chr4 30,954,610 30,958,718 GRMZM2G164084 sig2 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 264,527,252 264,530,002 GRMZM2G143392 sig2A from: AF099110 Chr4 17,349,492 17,354,543 GRMZM2G100086 sig2B aligns to cDNA AF099111 Chr1 39,680,080 39,682,830 GRMZM2G003182 sig3 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 231,692,547 231,695,297 GRMZM2G543629 sig5 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 30,954,610 30,958,718 GRMZM2G144196 sig6 from: Entrez Gene 542484 Chr5 647,402 650,238 GRMZM5G830932 sig7 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 168,024,789 168,028,473 GRMZM2G077436 sig8 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 168,300,149 168,302,190 GRMZM2G006736 sig9 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 75,590,751 75,594,655 GRMZM2G127141 simk1 alignment of Dq422149 and Ay433815 to B73_v2 Chr9 125,383,956 125,388,954 GRMZM2G319104 sin1 Chr6 46,506,476 46,518,999 GRMZM2G374971 sip1 Chr7 160,254,708 160,256,026 GRMZM2G090338 sir1 Chr6 157,217,904 157,222,724 GRMZM2G161664 sirk1 from Aquino et al., 2017 sequence alignment Chr9 133,799,373 133,804,572 GRMZM2G021786 sk1 Haywood et al., 2016 Chr2 27,602,064 27,606,189 GRMZM2G009506 sln1 Moon et al, 2013 Chr5 201,993,077 201,996,818 GRMZM2G031311 sm1 Casas et al., 2016 Chr6 133,839,846 133,843,446 GRMZM2G180283 sm2 Casas et al., 2016 Chr2 202,536,125 202,537,725 GRMZM2G136887 smh1 Classical Gene Chr8 139,912,821 139,920,531 GRMZM2G023667 smh3 Classical Gene Chr8 153,685,211 153,695,652 GRMZM2G108424 smh4 Classical Gene Chr3 204,430,351 204,438,078 GRMZM2G163291 smh5 Classical Gene Chr3 14,476,929 14,481,586 GRMZM2G095239 smh6 Classical Gene Chr5 17,123,432 17,138,841 GRMZM2G030148 smk1 Li, et al., 2014 Chr2 216,076,499 216,078,010 GRMZM2G023528 smk2 Yang et al., 2017 Chr4 239,684,932 239,688,530 GRMZM2G122810 smt1 Chr7 18,150,408 18,159,227 GRMZM2G075701 smt2 Chr1 8,025,216 8,027,013 GRMZM2G430745 smu2 Chr10 1,679,131 1,681,892 GRMZM2G077278 snrk1a1 Chr6 159,785,916 159,790,437 GRMZM2G180704 snrk1a2 Chr2 154,579,939 154,587,570 GRMZM2G138814 snrk1a3 Chr1 52,072,966 52,083,007 GRMZM2G035809 snrkII1 from sequence EU676033 Chr9 121,136,691 121,141,166 GRMZM2G066867 snrkII10 from sequence EU676041 Chr5 18,469,442 18,472,522 GRMZM2G063961 snrkII11 from sequence EU676042 Chr6 150,654,910 150,660,102 GRMZM2G056732 snrkII2 from sequence EU676034 Chr7 166,410,296 166,416,118 GRMZM2G180916 snrkII3 from sequence EU676035 Chr1 94,897,504 94,901,091 GRMZM2G110922 snrkII4 from sequence EU676036 Chr3 174,813,369 174,818,806 GRMZM2G110908 snrkII5 from sequence EU676037 Chr10 148,736,929 148,738,463 GRMZM2G130018 snrkII6 from: Entrez Gene 100216941 Chr4 115,177,727 115,188,805 GRMZM2G155593 snrkII7 aligns to sequence EU676039 Chr2 51,441,153 51,446,361 GRMZM2G138861 snrkII8 from aligmnent to sequence EU676040 Chr1 280,356,771 280,364,881 GRMZM2G114739 so1 B73_v2 alignment to FJ436404 and AY104501 Chr1 193,898,445 193,902,203 GRMZM2G025992 sod2 Classical Gene Chr7 171,775,019 171,778,224 GRMZM2G059991 sod3 Classical Gene Chr6 136,070,517 136,074,741 GRMZM2G169890 sod4 Classical Gene Chr1 60,147,420 60,151,012 GRMZM2G058522 sod9 Classical Gene Chr9 129,535,000 129,538,722 GRMZM2G175423 sodh1 from: EU963336 Chr1 197,301,249 197,304,338 GRMZM2G025222 spi1 Classical Gene Chr3 69,968,705 69,970,558 GRMZM2G025222 spi1 Chr3 69,968,705 69,970,558 GRMZM2G000278 spk1 from: BT055373 Chr5 171,731,069 171,736,269 GRMZM2G129913 spo1 Zhang et al, 2014 Chr5 7,125,276 7,129,809 GRMZM5G890820 spo2 Zhang et al, 2014 Chr4 32,840,049 32,842,275 GRMZM2G052581 spo3 Zhang et al, 2014 Chr1 43,509,811 43,512,799 GRMZM2G055489 spp1 Classical Gene Chr8 115,832,232 115,838,487 GRMZM2G097641 spp2 Sosso et al., 2015 Chr10 89,431,021 89,434,146 GRMZM2G060296 spr1 Chr1 1,960,833 1,968,021 GRMZM2G046576 spr9 from: Y10117 Chr6 121,303,197 121,311,768 GRMZM5G875238 sps1 Classical Gene Chr8 161,465,833 161,471,194 GRMZM2G140107 sps2 from: T26951 (chr 3 hit) Chr3 161,295,516 161,301,138 GRMZM2G108225 sqs1 From: ENTREZ GENE 541614 Chr5 3,667,095 3,677,998 GRMZM2G029396 sqsh1 Chr1 290,074,104 290,082,929 AC217293.3_FG007 srk1 from: BT060988 Chr2 232,381,878 232,388,093 GRMZM2G105019 srph1 from NM_001155651 in Wang et al 2014 Chr3 217,545,398 217,552,377 GRMZM2G042407 srs1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 207,433,916 207,443,393 GRMZM2G080295 srs2 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 196,299,773 196,301,206 GRMZM2G017606 srs3 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 216,534,703 216,536,379 GRMZM2G097683 srs4 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 60,161,264 60,163,883 GRMZM2G108798 srs5 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 85,368,896 85,371,594 GRMZM2G450459 srs6 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 143,217,455 143,220,101 GRMZM2G135783 srs7 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 142,938,485 142,940,360 GRMZM2G179021 srs8 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 143,145,425 143,146,225 GRMZM2G129451 ss1 Classical Gene Chr9 17,640,522 17,651,342 GRMZM2G044744 ss4 Chr8 124,838,621 124,847,166 GRMZM2G130043 ss5 Liu et al., 2015 Chr4 172,635,729 172,706,662 GRMZM2G090935 ssp1 from BT063485 Chr4 233,478,819 233,482,558 GRMZM2G098520 ssu1 Classical Gene Chr4 190,228,051 190,230,534 GRMZM2G113033 ssu1 Classical Gene Chr2 143,429,392 143,430,581 GRMZM2G113033 ssu2 Classical Gene Chr2 143,429,392 143,430,581 GRMZM2G177098 stc1 Classical Gene Chr9 11,745,997 11,754,981 GRMZM2G177098 stc1 from alignment of B73_v2 assembly to cDNA sequence accession AF296122 (Aug 2012 M Schaeffer) Chr9 11,745,997 11,754,981 GRMZM2G165433 stk1 Classical Gene Chr9 11,782,450 11,785,572 GRMZM2G179268 stk2 from: ABF81696 Chr2 41,122,571 41,124,341 GRMZM2G301647 stk3 Wang et al., 2017 Chr4 175,306,259 175,309,558 GRMZM2G023073 stm1 Chr10 77,758,100 77,774,208 GRMZM2G097768 stp1 Classical Gene Chr8 73,418,620 73,424,707 GRMZM2G138060 su1 Classical Gene Chr4 41,396,390 41,405,179 GRMZM2G138060 su1 Chr4 41,396,390 41,405,179 GRMZM2G348551 su2 Classical Gene Chr6 113,414,100 113,419,156 GRMZM2G090905 su4 From Genbank sequence homology Chr6 144,755,799 144,758,179 GRMZM2G064799 sudh1 Chr7 4,239,369 4,244,199 GRMZM2G076524 sudh10 Chr5 13,264,659 13,269,113 GRMZM2G306945 sudh11 Chr1 64,881,015 64,884,264 GRMZM2G146965 sudh12 Chr1 262,265,889 262,269,879 GRMZM2G302259 sudh2 from: BT037104 (chr 4 hit) Chr4 37,053,697 37,057,117 GRMZM2G056912 sudh3 Chr8 22,054,607 22,060,804 GRMZM2G079888 sudh4 Chr2 237,069,904 237,075,210 GRMZM2G109271 sudh5 Chr1 62,981,705 63,005,931 GRMZM2G398876 sudh6 Chr10 115,607,469 115,611,338 GRMZM2G134134 sudh7 Chr6 6,270,568 6,274,593 GRMZM2G023760 sudh8 Chr9 14,624,670 14,625,146 GRMZM2G160685 sudh9 Chr6 154,876,071 154,884,333 GRMZM2G105604 sum1 from: D83391 Chr3 216,674,441 216,678,588 GRMZM2G053898 sumo1a Augustine et al, 2016 Chr8 161,569,233 161,573,399 GRMZM2G082390 sumo1b Augustine et al, 2016 Chr8 161,721,257 161,724,576 GRMZM2G305196 sumo2 Augustine et al, 2016 Chr7 159,960,915 159,961,570 GRMZM2G073404 sumov1 Augustine et al, 2016 Chr8 141,677,418 141,681,979 GRMZM2G109818 sun1 Classical Gene Chr5 88,695,793 88,701,952 GRMZM2G109818 sun1 Chr5 88,695,793 88,701,952 GRMZM2G440614 sun2 Classical Gene Chr3 38,600,230 38,605,885 GRMZM2G440614 sun2 from alignment of sequence accession BT055722 (Apr 2011) Chr3 38,600,230 38,605,885 GRMZM2G005483 sun4 Assigned by BLAST at MaizeGDB (M Schaeffer Apr 2011) Chr8 165,131,574 165,135,243 GRMZM2G005483 sun4 Classical Gene Chr8 165,131,574 165,135,243 AC194341.4_FG003 sun5 by alignment on RefGen_V2 (M Schaeffer Apr 2011) Chr8 140,924,162 140,926,362 AC194341.4_FG003 sun5 Classical Gene Chr8 140,924,162 140,926,362 GRMZM2G152908 sus1 Classical Gene Chr9 122,479,052 122,485,725 GRMZM2G318780 sus2 from AY124703 Chr1 56,787,028 56,794,227 GRMZM2G034302 sut1 B73_v2 alignment to cDNA AB008464 Chr1 15,069,084 15,074,473 GRMZM2G307561 sut2 from AY603492 Chr3 94,809,651 94,815,766 GRMZM2G083248 sut3 Sosso et al., 2015 Chr1 243,274,177 243,277,640 GRMZM2G145107 sut4 from AY581895 Chr5 216,637,674 216,642,140 GRMZM2G081589 sut5 Sosso et al., 2015 Chr5 176,533,898 176,537,221 GRMZM2G106741 sut6 Sosso et al., 2015 Chr4 124,976,888 124,980,047 GRMZM2G087901 sut7 blast match to AY106212 on 9L " Sucrose transporter" Chr9 151,514,437 151,518,716 GRMZM2G368827 sweet11 Sosso et al., 2015 Chr1 194,965,437 194,968,347 GRMZM2G133322 sweet12a Sosso et al., 2015 Chr1 59,182,679 59,185,966 GRMZM2G099609 sweet12b Sosso et al., 2015 Chr9 130,027,643 130,030,345 GRMZM2G173669 sweet13a Sosso et al., 2015 Chr10 14,767,640 14,770,295 GRMZM2G021706 sweet13b Sosso et al., 2015 Chr10 14,648,064 14,650,932 GRMZM2G179349 sweet13c Sosso et al., 2015 Chr3 108,721,006 108,722,375 GRMZM2G094955 sweet14a Sosso et al., 2015 Chr2 223,375,329 223,377,937 GRMZM2G015976 sweet14b Sosso et al., 2015 Chr4 21,691,924 21,695,433 GRMZM2G168365 sweet15a Sosso et al., 2015 Chr4 96,336,663 96,338,566 GRMZM5G872392 sweet15b Sosso et al., 2015 Chr5 164,895,210 164,898,398 GRMZM2G107597 sweet16 Sosso et al., 2015 Chr1 57,248,463 57,251,591 GRMZM2G106462 sweet17a Sosso et al., 2015 Chr3 56,813,678 56,821,576 GRMZM2G111926 sweet17b Sosso et al., 2015 Chr8 33,368,351 33,373,788 GRMZM2G039365 sweet1a Sosso et al., 2015 Chr3 171,792,049 171,795,701 GRMZM2G153358 sweet1b Sosso et al., 2015 Chr6 148,107,348 148,110,301 GRMZM2G324903 sweet2 Sosso et al., 2015 Chr8 58,837,906 58,840,227 GRMZM2G179679 sweet3a Sosso et al., 2015 Chr8 112,056,618 112,058,331 GRMZM2G060974 sweet3b Sosso et al., 2015 Chr3 2,955,821 2,957,584 GRMZM2G000812 sweet4a Sosso et al., 2015 Chr5 126,853,038 126,855,915 GRMZM2G144581 sweet4b Sosso et al., 2015 Chr5 127,638,855 127,642,404 GRMZM2G137954 sweet4c Sosso et al., 2015 Chr5 127,500,983 127,504,476 GRMZM2G157675 sweet6a Sosso et al., 2015 Chr3 223,847,899 223,851,013 GRMZM2G416965 sweet6b Sosso et al., 2015 Chr8 141,481,938 141,485,043 GRMZM2G009785 sxd1 Classical Gene Chr5 133,540,574 133,557,141 GRMZM2G387890 syd1 Chr6 118,452,039 118,460,501 GRMZM2G081955 tab2 Belcher et al., 2015 Chr5 183,533,765 183,536,017 GRMZM2G111906 tacs1 Classical Gene Chr6 82,660,395 82,663,470 GRMZM2G111906 tacs1 Chr6 82,660,395 82,663,470 GRMZM2G002276 taf1 Classical Gene Chr3 179,837,079 179,842,136 GRMZM2G039113 tan1 Classical Gene Chr6 142,758,475 142,760,706 GRMZM2G075844 tap1 Chr5 61,239,228 61,243,371 GRMZM2G127160 tar1 from alignment to sequence EU872320 (June 2012 MLS) Chr6 123,615,202 123,618,258 GRMZM2G141810 tar3 from Bernardi et al 2012 Chr6 129,844,054 129,847,591 GRMZM2G139813 tat1 Chr2 225,968,332 225,976,565 AC233950.1_FG002 tb1 Classical Gene Chr1 265,811,311 265,813,044 GRMZM2G149238 tbp1 from: L13301 Chr1 259,016,743 259,021,894 GRMZM2G161418 tbp2 Classical Gene Chr5 15,340,632 15,345,558 GRMZM2G118515 tcp1 from Frelin et al 2012 Chr8 159,216,940 159,224,411 GRMZM2G124911 tcp2 from Frelin et al 2012 Chr3 154,750,579 154,774,482 GRMZM2G142751 tcptf10 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 112,768,227 112,770,230 GRMZM2G166687 tcptf11 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 214,354,391 214,355,375 GRMZM2G093895 tcptf12 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 10,294,382 10,296,488 GRMZM2G359599 tcptf13 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 612,258 614,155 GRMZM2G465091 tcptf14 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 132,055,803 132,056,847 GRMZM2G060319 tcptf15 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 82,385,034 82,386,103 GRMZM2G178603 tcptf16 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 188,505,434 188,506,555 GRMZM2G458087 tcptf17 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 110,222,622 110,224,294 GRMZM2G064628 tcptf18 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 110,809,038 110,810,529 AC199782.5_FG003 tcptf19 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 195,005,257 195,006,904 GRMZM2G003944 tcptf2 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 205,135,012 205,137,037 GRMZM2G034638 tcptf20 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 160,527,351 160,529,186 GRMZM2G107031 tcptf21 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 197,227,445 197,228,576 GRMZM2G135461 tcptf22 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 142,954,944 142,956,691 GRMZM2G120151 tcptf23 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 158,563,456 158,566,518 GRMZM2G015037 tcptf24 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 24,477,984 24,481,369 GRMZM2G078077 tcptf25 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 145,641,628 145,642,678 GRMZM2G077755 tcptf26 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 207,185,179 207,187,500 GRMZM2G414114 tcptf27 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 225,192,935 225,197,146 GRMZM2G062711 tcptf28 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 55,947,182 55,947,871 GRMZM2G148022 tcptf29 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 173,529,415 173,541,170 GRMZM2G110242 tcptf3 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 180,630,151 180,631,609 GRMZM2G166946 tcptf30 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 194,948,766 194,951,387 GRMZM2G089638 tcptf31 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 140,859,692 140,861,716 GRMZM2G031905 tcptf32 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 27,463,599 27,465,214 AC205574.3_FG006 tcptf33 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 3,475,925 3,478,586 AC234521.1_FG006 tcptf34 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 22,891,424 22,892,551 GRMZM2G055024 tcptf35 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 2,551,378 2,555,043 GRMZM2G424261 tcptf36 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 112,133,491 112,135,588 GRMZM2G088440 tcptf37 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 182,307,219 182,309,604 GRMZM2G180568 tcptf38 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 168,258,012 168,259,093 GRMZM2G170232 tcptf39 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 36,959,864 36,961,776 GRMZM2G445944 tcptf4 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 216,656,588 216,657,717 GRMZM2G096610 tcptf40 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 100,088,723 100,089,636 GRMZM2G416524 tcptf41 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 136,203,178 136,208,519 AC213524.3_FG003 tcptf42 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 193,546,929 193,548,421 GRMZM2G020805 tcptf43 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 235,465,951 235,472,063 GRMZM2G089361 tcptf44 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 4,945,651 4,947,211 GRMZM2G115516 tcptf5 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 285,381,000 285,385,544 AC190734.2_FG003 tcptf6 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 11,858,801 11,859,880 GRMZM2G035944 tcptf7 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 122,433,073 122,435,587 GRMZM2G092214 tcptf8 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 158,493,312 158,495,256 GRMZM2G113888 tcptf9 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 5,004,014 5,006,205 GRMZM2G016145 tcrr1 Chr4 70,600,591 70,601,871 GRMZM2G075624 tct1 from BT068707 Chr5 67,851,004 67,853,565 GRMZM2G300133 td1 From sequence in Fig 4 of Bommert et al., 2005 Chr5 61,698,661 61,702,214 GRMZM2G055458 tdpk1 Guan et al., 2014 Chr3 66,270,831 66,282,839 GRMZM5G864815 tdpk2 Guan et al., 2014 Chr6 137,792,544 137,795,002 GRMZM2G321778 tdy1 Classical Gene Chr6 166,836,363 166,837,893 GRMZM2G321778 tdy1 from B73_v2 alignment to genomic sequence FJ376984 Chr6 166,836,363 166,837,893 GRMZM5G840560 tdy2 Slewinski et al., 2012; homology to sb04g038510 Chr5 217,413,183 217,431,897 GRMZM2G085113 te1 Classical Gene Chr3 165,216,844 165,220,769 GRMZM2G085113 te1 Chr3 165,216,844 165,220,769 GRMZM2G144166 tel2 Chr5 181,264,982 181,272,627 GRMZM2G078283 tena1 Guan et al., 2014 Chr4 48,570,462 48,572,773 GRMZM2G148896 tena2 Guan et al., 2014 Chr1 201,771,782 201,775,619 GRMZM2G080501 tena3 Guan et al, 2014 Chr9 135,600,972 135,602,731 GRMZM2G017831 tfIIB1 Chr9 148,929,810 148,933,147 GRMZM2G101511 tga1 Classical Gene Chr4 44,534,815 44,539,478 GRMZM2G101511 tga1 Chr4 44,534,815 44,539,478 GRMZM2G044027 tgd1 Chr1 41,473,411 41,478,103 GRMZM2G025054 tgz15a from: AJ421525 (chr 10 hit) Chr10 125,323,532 125,327,383 GRMZM2G045005 tgz21 from: AJ488103 Chr2 38,044,187 38,048,031 GRMZM2G090086 tha1 from partial cDNA U71123 Chr2 128,922,840 128,930,111 GRMZM2G472651 tha4 alignment of cDNA AF145755 | 4877983 (v2 Jul 2011) Chr1 253,336,039 253,339,554 GRMZM2G300408 tha5 provided by A Barkan (2010) Chr9 14,541,001 14,542,356 AC217965.2_FG012 tha8 From: AY530730 Chr8 15,108,789 15,109,580 GRMZM2G128454 tha9 from alignment to sequence AF145756 Chr5 17,372,076 17,374,433 GRMZM2G018375 thi1 aligns to sequence U17350 on B73_v2 reference genome Chr8 137,677,256 137,679,026 GRMZM2G074097 thi2 aligns to sequence U17351 on ref. genome B73_v2 (MLS Jan 2013) Chr3 218,917,243 218,918,947 GRMZM2G401934 thi3 from sequence AM167973 alignment to B73_v2 Chr3 138,804,559 138,811,009 GRMZM2G027663 thic1 Guan et al., 2014 Chr1 256,626,740 256,633,146 GRMZM2G094558 thim1 Yazdani et al., 2013 Chr8 47,311,260 47,314,747 GRMZM2G085474 thl1 Chr1 180,427,789 180,433,544 GRMZM2G473389 tho1 Chr1 4,284,638 4,287,038 GRMZM2G050570 thr1 Chr3 206,609,421 206,611,387 GRMZM2G157219 thx1 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 164,397,872 164,405,814 GRMZM2G415229 thx10 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 140,445,959 140,448,997 GRMZM2G016649 thx12 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 22,414,453 22,418,920 GRMZM2G134439 thx13 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 98,309,006 98,312,767 GRMZM2G163157 thx14 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 149,680,318 149,681,806 GRMZM2G021831 thx15 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 46,408,460 46,410,063 GRMZM2G063203 thx16 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 149,923,554 149,927,268 GRMZM2G080583 thx17 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 209,815,458 209,817,472 GRMZM2G314660 thx18 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 3,070,619 3,075,128 GRMZM2G414159 thx19 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 22,121,290 22,125,541 GRMZM2G392168 thx2 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 119,936,505 119,938,289 GRMZM2G169580 thx20 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 190,292,136 190,295,846 GRMZM2G037128 thx21 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 241,077,710 241,081,030 GRMZM2G111760 thx22 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 67,208,649 67,211,604 GRMZM2G156348 thx23 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 12,103,921 12,107,093 GRMZM2G380094 thx24 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 175,099,364 175,100,572 GRMZM2G047370 thx25 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 126,511,889 126,515,647 GRMZM2G002978 thx26 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 59,987,056 59,992,370 AC209784.3_FG011 thx27 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 181,029,394 181,032,191 GRMZM2G428470 thx28 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 114,575,016 114,577,006 GRMZM2G326783 thx29 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 134,290,370 134,296,361 GRMZM5G850092 thx3 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 197,161,489 197,162,856 GRMZM2G481163 thx4 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 94,888,973 94,890,564 GRMZM2G016637 thx5 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 25,703,021 25,704,825 GRMZM2G339957 thx6 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 154,781,227 154,784,741 GRMZM2G023119 thx7 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 122,587,640 122,590,008 GRMZM2G379179 thx8 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 182,381,758 182,383,378 GRMZM2G037493 thx9 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 186,502,389 186,506,512 GRMZM2G073535 TIDP3683 Chr6 156,713,541 156,715,788 GRMZM5G835323 tif1 Classical Gene Chr7 154,305,680 154,308,577 GRMZM2G144030 tif5A Classical Gene Chr7 163,041,712 163,045,353 Zm00001d027652 tip1 Chr1 10,150,836 10,152,891 GRMZM2G168439 tip2 from: AF326500 Chr8 156,113,368 156,114,570 GRMZM2G027098 tip2a from Entrez Gene 541894 Chr4 152,458,301 152,459,746 GRMZM2G056908 tip2b from Entrez Gene 541895 Chr5 191,963,084 191,964,288 GRMZM2G305446 tip3a from: AY104541 Chr5 25,531,005 25,532,346 GRMZM2G103983 tip3b from: AF342809 Chr1 228,464,359 228,465,647 GRMZM2G103945 tip4a from: AF326505 Chr6 133,537,405 133,539,720 GRMZM2G108273 tip4b from: AF326506 Chr8 110,236,661 110,239,074 GRMZM2G146627 tip4c from: AF326507 Chr3 13,536,786 13,539,654 GRMZM2G093090 tip4d from: AF326508 Chr3 1,847,706 1,848,827 GRMZM2G125023 tip5 from: AF326509 Chr10 139,149,943 139,152,962 GRMZM2G033208 tk1 from: EU942796 Chr9 22,790,749 22,795,294 Zm00008a009742 tla1 PH207 v1 chr2 214,970,306 214,971,076 GRMZM2G016671 tlk1 Classical Gene Chr1 276,396,791 276,429,710 GRMZM2G172132 tlk2 Classical Gene Chr5 7,231,744 7,248,155 GRMZM2G176209 tls1 from: Leonard, A et al. 2014 Chr1 223,906,865 223,910,808 GRMZM2G036564 tm20 Classical Gene Chr6 120,315,469 120,319,622 GRMZM2G147727 tms5 from sequence in Li et al., 2017 Chr4 223,366,764 223,369,176 GRMZM2G159777 toc34 Chr9 144,054,835 144,061,089 GRMZM2G157157 toc35 from: AJ271049 Chr1 32,202,204 32,208,281 AC185226.4_FG001 tola1 from: T15269 (chr hit) Chr4 162,608,157 162,617,862 GRMZM2G063306 tom1 Nozoye et al., 2015 Chr3 112,059,631 112,065,432 GRMZM2G141081 tom3 Nozoye et al, 2015 Chr2 149,197,052 149,201,004 GRMZM2G305211 tpi1 from: L00371 (chr 7 hit) Chr7 159,951,153 159,960,399 GRMZM2G002807 tpi2 Chr2 196,570,628 196,574,505 GRMZM2G018177 tpi3 from: EU959275 Chr8 14,391,800 14,395,986 GRMZM2G030784 tpi4 From: Entrez Gene 100272481 Chr3 17,832,286 17,836,567 GRMZM2G146206 tpi5 by homology and map location Chr8 168,296,435 168,300,637 GRMZM2G316967 tpl1 Li et al., 2016 Chr3 35,794,787 35,804,261 GRMZM2G030422 tpl2 Li et al., 2016 Chr1 35,244,552 35,255,551 GRMZM2G049538 tps1 from AF529266 Chr2 10,602,719 10,611,664 GRMZM2G179092 tps10 from AY928078 Chr10 74,488,739 74,492,309 GRMZM2G127087 tps11 from cDNA alignment AY647254 - there are 2 location on B73 v2 assembly, very close to each other (M Schaeffer Aug 2012) Chr10 55,612,816 55,765,958 GRMZM2G010356 tps17 Chr2 113,211,755 113,214,535 GRMZM2G046615 tps2 from AY928081 Chr5 71,292,782 71,295,610 GRMZM2G127336 tps23 from alignment to cDAN EU259633 on B73_v2 assembly (Aug 2012, M Schaeffer) Chr10 57,658,111 57,664,789 GRMZM2G030583 tps26 aligns to cDNA GenBank accession EF599328 Chr6 107,478,552 107,483,274 GRMZM2G064406 tps3 from NM_001112385 Chr5 71,410,033 71,413,111 GRMZM2G117319 tps4 from AY518310 Chr10 74,022,933 74,026,069 GRMZM2G074309 tps5 from GenBank AY518311 match Chr10 74,248,611 74,251,874 GRMZM2G127087 tps6 from AY518315 Chr10 55,612,816 55,765,958 AC217050.4_FG007 tps7 from AY518316 Chr1 214,936,884 214,943,430 GRMZM2G038153 tps8 from AY928080 Chr1 61,014,839 61,021,281 GRMZM2G465812 tps9 from AY518317 Chr10 73,850,131 73,851,474 GRMZM2G162690 tre1 Zhou et al., 2013 Chr1 80,003,683 80,008,544 GRMZM2G424053 trh1 Classical Gene Chr6 157,965,018 157,969,757 GRMZM2G144653 trh2 from: AJ890021 Chr7 13,181,810 13,184,354 GRMZM2G079089 trh3 from BT042328 Chr3 219,419,739 219,421,147 GRMZM2G181258 trm1 Chr10 16,218,811 16,219,788 GRMZM2G358009 trm2 Chr3 138,151,050 138,152,140 GRMZM2G131202 trm3 from Cell Genomics Project (Oct 2013) Chr2 51,853,125 51,854,807 GRMZM2G347280 trpp1 Zhou et al., 2013 Chr1 217,833,921 217,836,445 GRMZM2G080354 trpp10 Zhou et al., 2013 Chr9 5,654,774 5,657,748 GRMZM2G178546 trpp11 Zhou et al., 2013 Chr9 117,179,608 117,183,243 GRMZM2G140078 trpp2 Zhou et al., 2013 Chr2 177,921,904 177,924,464 GRMZM2G117564 trpp3 Zhou et al., 2013 Chr2 213,142,636 213,145,421 GRMZM2G151044 trpp4 Zhou et al., 2013 Chr4 180,916,055 180,919,097 GRMZM2G059840 trpp5 Zhou et al., 2013 Chr4 183,294,232 183,295,877 GRMZM2G112830 trpp6 Zhou et al., 2013 Chr5 192,358,347 192,362,866 GRMZM2G055150 trpp7 Zhou et al., 2013 Chr5 208,220,125 208,222,639 GRMZM2G174396 trpp8 Zhou et al., 2013 Chr7 100,351,591 100,353,678 GRMZM5G840145 trpp9 Zhou et al., 2013 Chr7 166,884,741 166,887,809 GRMZM2G068943 trps1 from EU659122 & Zhou et al., 2013 Chr8 123,130,508 123,138,783 GRMZM2G312521 trps10 Zhou et al., 2013 Chr4 174,991,784 174,996,304 GRMZM2G122231 trps11 Zhou et al., 2013 Chr5 213,103,736 213,107,678 GRMZM2G001304 trps12 Zhou et al., 2013 Chr6 159,446,662 159,451,841 GRMZM2G019183 trps13 Zhou et al., 2013 Chr7 107,954,189 107,958,866 GRMZM2G416836 trps14 Zhou et al., 2013 Chr8 5,488,159 5,500,321 GRMZM2G118462 trps15 Zhou et al., 2013 Chr8 173,973,120 173,978,270 GRMZM2G099860 trps2 Zhou et al., 2013 Chr1 28,446,754 28,451,214 GRMZM2G079928 trps3 Zhou et al., 2013 Chr1 210,710,797 210,714,526 GRMZM2G008226 trps4 Zhou et al., 2013 Chr1 218,618,199 218,623,790 GRMZM2G527891 trps5 Zhou et al., 2013 Chr2 178,595,620 178,602,402 GRMZM2G304274 trps6 Zhou et al., 2013 Chr3 197,959,792 197,974,963 GRMZM2G123277 trps7 Zhou et al., 2013 Chr3 198,017,608 198,022,549 GRMZM2G007736 trps8 Zhou et al., 2013 Chr4 61,432,557 61,437,544 GRMZM2G366659 trps9 Zhou et al., 2013 Chr4 76,359,450 76,362,880 GRMZM2G039867 tru1 Li, W. 2012 Chr3 150,088,574 150,091,550 GRMZM2G104843 ts1 Classical Gene Chr2 45,820,737 45,825,105 GRMZM2G455809 ts2 Classical Gene Chr1 46,683,464 46,684,885 GRMZM5G803935 ts4 Classical Gene Chr3 144,918,011 144,918,720 GRMZM5G862109 ts6 alignment of cDNA AF048900 GI:2944039 to B73_v2 (Jul 2011) Chr1 292,966,682 292,970,925 GRMZM5G862109 ts6 Classical Gene Chr1 292,966,682 292,970,925 GRMZM5G841619 tsa1 from alignment to cDNA EU334442 Chr7 10,780,313 10,784,254 GRMZM2G046191 tsah1 from alignment with cDNA AF271384 Chr1 288,331,936 288,337,173 GRMZM2G325850 tsh1 Classical Gene Chr6 166,277,494 166,278,842 GRMZM2G307588 tsh4 based on sequence for spb6 (Clint Whipple, pers comm) Chr7 133,202,776 133,206,423 GRMZM2G056403 tti1 Garcia et al., 2017 Chr5 43,832,034 43,852,685 GRMZM2G370777 tu1 from sequence AJ430633 Chr4 178,918,189 178,925,234 GRMZM2G153292 tua1 from sequence EU966592; transcript GRMZM2G153292_T06; T06 transcript corresponds to tua1 identified in sequence X15704, B73_v2 Chr1 271,172,696 271,181,023 GRMZM2G153292 tua2 Transcript GRMZM2G153292_T01; gene model includes both tua1, and tua2 Chr1 271,172,696 271,181,023 AC195340.3_FG001 tua3 from: BT054944 Chr5 5,434,731 5,437,116 GRMZM2G152466 tua4 Classical Gene Chr5 9,481,738 9,485,476 GRMZM2G099167 tua5 Classical Gene Chr2 207,291,939 207,295,620 GRMZM2G083243 tua6 Classical Gene Chr7 160,071,867 160,075,599 GRMZM2G164696 tub1 from Cell Genomics Project (OCT 2013) Chr1 2,035,661 2,037,950 GRMZM2G334899 tub2 Classical Gene Chr8 104,292,707 104,296,183 GRMZM2G108766 tub3 Classical Gene Chr1 258,611,047 258,615,106 GRMZM2G066191 tub4 Classical Gene Chr5 14,869,913 14,874,139 GRMZM2G133802 tub5 from: L10636 Chr3 47,738,975 47,742,300 GRMZM2G172932 tub6 from Entrez Gene 100382290 Chr8 170,881,296 170,884,640 Zm00001d046996 tub7 Chr9 114,521,702 114,522,844 GRMZM2G071790 tubb6 from: Entrez Gene 542239 Chr3 187,499,362 187,503,653 GRMZM2G073888 tubg1 Chr8 78,798,124 78,804,134 GRMZM2G085970 tubg2 from: X78891 Chr6 126,762,125 126,766,341 GRMZM2G068586 tubtf1 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 149,813,540 149,818,967 GRMZM2G129288 tubtf10 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 150,264,620 150,270,514 GRMZM2G378907 tubtf11 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 60,094,998 60,103,977 GRMZM5G871407 tubtf12 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 167,438,145 167,440,601 GRMZM2G349376 tubtf13 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 112,038,910 112,042,465 GRMZM2G001272 tubtf14 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 8,789,860 8,796,975 GRMZM2G062154 tubtf15 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 209,720,836 209,725,600 GRMZM5G866954 tubtf2 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 175,734,269 175,738,021 GRMZM2G046816 tubtf3 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 214,907,581 214,912,733 GRMZM2G108228 tubtf4 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 25,431,508 25,435,921 GRMZM2G435445 tubtf5 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 158,666,528 158,671,070 GRMZM2G176340 tubtf6 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 160,005,783 160,009,342 GRMZM2G163726 tubtf7 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 195,960,621 195,964,652 GRMZM2G472945 tubtf8 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 90,798,763 90,801,363 GRMZM2G115701 tubtf9 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 200,962,624 200,966,193 GRMZM2G022269 tufm1 from: Entrez Gene 100273405 Chr1 298,487,571 298,492,926 GRMZM2G051879 uaz248a(his3) Chr1 67,652,509 67,655,143 Zm00001d029394 uaz248a(his3) v4 Chr1 68,805,980 68,808,399 GRMZM2G176358 uaz248b(his3) Chr5 175,696,565 175,700,974 Zm00001d016908 uaz248b(his3) Chr5 179,675,631 179,680,148 GRMZM2G160917 ub2 assigned by the Grassius project, (Yilmaz et al 2009), also from AJ011618 and Chuck et al, 2014 Chr1 188,215,376 188,219,483 GRMZM2G460544 ub3 assigned by the Grassius project, (Yilmaz et al 2009), from: AJ011620, and Chuck et al., 2014 Chr4 199,456,664 199,460,958 GRMZM2G409726 ubi1 from: EU734563 Chr5 82,479,947 82,483,338 GRMZM2G419891 ubi2 Classical Gene Chr4 237,423,191 237,427,552 GRMZM2G014119 ubi3 Ding et al., 2017 Chr6 96,004,229 96,006,495 GRMZM2G156575 ubl1 Li et al., 2016 Chr5 190,738,089 190,739,754 GRMZM2G017845 ubr1 from BT085014 Chr6 52,901,117 52,909,594 GRMZM2G018447 uce1 Classical Gene Chr3 93,201,404 93,219,385 GRMZM2G177276 uce2 Hawkins et al., 2014 Chr9 11,707,996 11,712,257 GRMZM2G070047 uce3 from: U49913 Chr1 4,974,957 4,978,299 GRMZM2G102471 uce4 Chr2 2,808,177 2,811,018 GRMZM2G022859 uce5 Chr1 267,922,012 267,928,571 GRMZM2G141009 uck1 Chr6 57,559,271 57,563,575 GRMZM5G852877 ucp1 Xu et al., 2017 Chr10 96,336,115 96,339,634 GRMZM2G165629 ucp2 Xu et al., 2017 Chr2 115,499,484 115,509,245 GRMZM2G000510 ucp3 Chr4 32,433 63,643 GRMZM2G040627 udg1 Chr2 2,072,014 2,081,975 GRMZM6G729818 ugp1 from: EU959978 & T14797 (chr 2 hit) to v3 Chr2 198,410,457 198,414,756 GRMZM2G032003 ugp2 From: T14797 (chr 7 hit) Chr7 146,528,252 146,535,144 GRMZM2G162755 ugt1 Rius et al., 2016 Chr6 120,058,984 120,060,863 GRMZM2G134903 ugu1 Chr5 34,604,351 34,608,765 GRMZM2G448701 umc1041 Chr1 6,148,853 6,149,887 GRMZM2G301071 umc106a Chr1 274,775,918 274,780,056 GRMZM2G136831 umc109 Chr9 3,310,246 3,313,061 GRMZM2G163912 umc1111 Chr1 288,808,469 288,813,563 GRMZM2G016210 umc1122 Chr1 201,673,513 201,678,322 GRMZM5G854901 umc1123 Chr1 188,048,202 188,051,323 GRMZM2G031893 umc1128 Chr1 224,317,806 224,322,949 GRMZM2G438386 umc1147 Chr1 225,170,303 225,174,114 GRMZM2G105005 umc1149 Chr8 159,840,596 159,842,605 GRMZM2G162814 umc115 Chr1 14,939,938 14,942,616 GRMZM2G137329 umc1177 Chr1 2,993,011 2,993,734 GRMZM2G127635 umc1200 Chr1 23,109,443 23,111,096 GRMZM2G061626 umc1220 Chr1 293,231,711 293,232,742 GRMZM2G056870 umc1222 Chr1 10,989,939 10,997,425 GRMZM2G085198 umc1243 Chr1 83,531,702 83,533,706 GRMZM2G113781 umc1245 Chr1 229,874,104 229,877,959 GRMZM2G087146 umc124a(chk) Chr8 21,151,886 21,155,655 GRMZM2G045135 umc1254 Chr1 196,619,128 196,623,386 Zm00001d017444 umc126a v4 Chr5 196,011,766 196,014,768 Zm00001d017444 umc126a v4 Chr5 196,012,063 196,014,634 GRMZM2G092595 umc1278 Chr1 215,254,512 215,259,644 GRMZM2G026780 umc1290 Chr1 270,897,979 270,898,979 GRMZM2G176604 umc1292 Chr1 5,401,254 5,405,109 GRMZM2G125931 umc130 Chr10 13,559,624 13,562,431 GRMZM2G153476 umc1306 Chr1 265,241,093 265,242,952 GRMZM2G024933 umc131 from: AY771215 Chr2 71,740,629 71,768,626 GRMZM2G100121 umc1323 Chr1 170,491,369 170,495,919 GRMZM2G014303 umc132a(chk) Chr6 161,321,890 161,325,363 GRMZM5G874478 umc1331 Chr1 296,282,014 296,284,211 GRMZM2G477872 umc1335 Chr1 197,104,210 197,113,406 GRMZM2G112617 umc1356 Chr1 206,507,475 206,509,065 GRMZM2G119761 umc1374 Chr1 206,554,966 206,558,522 GRMZM2G052650 umc1386b Chr1 170,866,748 170,871,629 GRMZM2G329655 umc1395 Chr1 164,572,134 164,574,375 GRMZM2G005652 umc1396 Chr1 191,123,119 191,128,083 GRMZM2G160506 umc1397 Chr1 39,115,112 39,118,417 GRMZM2G108032 umc1403 Chr1 33,126,620 33,130,048 GRMZM2G108861 umc140a Chr1 258,714,960 258,716,976 GRMZM6G799230 umc1411a scaffold_511 279 2,173 GRMZM2G078200 umc1421 Chr1 287,959,555 287,963,914 GRMZM2G004012 umc1431 Chr1 267,212,960 267,213,968 GRMZM2G162508 umc1446 Chr1 240,842,179 240,846,321 GRMZM2G107463 umc1452 Chr1 53,171,372 53,176,168 GRMZM5G887068 umc1457 Chr8 101,647,239 101,650,151 AC202185.4_FG004 umc1461 Chr1 122,169,770 122,170,960 GRMZM2G134367 umc1467 Chr1 20,418,111 20,419,920 GRMZM2G466982 umc1469 Chr1 115,653,428 115,654,009 GRMZM2G124576 umc1472 Chr1 59,672,736 59,676,878 GRMZM2G042032 umc1479 Chr1 43,137,809 43,141,198 GRMZM2G037865 umc1482 Chr5 171,020,159 171,021,294 GRMZM2G107532 umc1484 Chr1 9,428,005 9,432,250 GRMZM2G389567 umc1486 Chr1 211,043,052 211,043,783 GRMZM2G069218 umc1500 Chr1 285,603,499 285,608,445 GRMZM2G154523 umc1509 Chr4 5,460,337 5,462,342 GRMZM2G004878 umc1511 Chr4 81,276,744 81,278,113 GRMZM5G831951 umc1538a Chr1 291,973,322 291,974,630 GRMZM2G109429 umc1539 Chr3 168,533,377 168,536,519 GRMZM2G371210 umc1553 Chr1 287,054,286 287,062,461 GRMZM2G047187 umc1558 Chr1 85,839,688 85,844,369 GRMZM2G176962 umc1590 Chr1 182,873,055 182,876,103 GRMZM2G038855 umc1601 Chr1 166,785,190 166,789,349 GRMZM2G127739 umc1603 Chr1 165,422,830 165,427,702 GRMZM5G821637 umc1605 Chr1 298,766,998 298,771,703 GRMZM2G132077 umc1611 Chr1 152,175,789 152,176,887 GRMZM2G161560 umc1613 Chr1 1,785,557 1,787,537 GRMZM2G472827 umc161a Chr1 283,258,252 283,262,785 GRMZM5G801886 umc1626 Chr1 157,148,809 157,149,892 GRMZM2G064031 umc1641 Chr3 227,133,973 227,141,739 GRMZM2G083725 umc1664 Chr1 194,690,089 194,692,196 GRMZM2G135341 umc168 Chr7 174,404,316 174,410,512 GRMZM2G159996 umc1709 Chr1 195,590,031 195,594,661 GRMZM2G008687 umc1710 Chr7 156,539,630 156,543,248 GRMZM2G107815 umc1711 Chr1 25,409,169 25,413,691 GRMZM2G171559 umc1715 LOC100383109 GRMZM2G171559 LOC100276185 -- Chr1 226,296,202 226,296,963 GRMZM2G114667 umc1734 Chr1 92,254,266 92,255,946 GRMZM2G082312 umc1737 Chr1 290,377,065 290,381,073 GRMZM2G073155 umc1744 In v3 browser. Not in v4 browser or NCBI Gene Chr1 292,873,373 292,873,972 GRMZM2G386209 umc1748 Chr1 191,892,986 191,895,008 GRMZM2G125304 umc1790a Chr1 82,498,393 82,505,931 GRMZM2G057283 umc17a Chr3 205,369,890 205,371,486 AC187262.4_FG007 umc1811 Chr1 184,732,930 184,733,551 GRMZM2G169451 umc1812 Chr1 180,743,250 180,744,404 GRMZM2G069618 umc1849 Chr1 56,894,719 56,897,083 GRMZM2G041050 umc1906 Chr1 162,601,608 162,610,432 AC213099.3_FG001 umc1917 Chr1 62,921,411 62,922,558 GRMZM2G329909 umc1919a Chr1 191,885,470 191,889,519 GRMZM5G896294 umc1919a Chr1 191,891,265 191,892,243 GRMZM2G057173 umc1924 Chr1 240,012,334 240,013,819 GRMZM2G172758 umc1948 Chr1 8,531,138 8,532,984 GRMZM2G067315 umc1955 Chr1 235,968,685 235,970,191 GRMZM2G162535 umc1976 Chr1 21,567,145 21,568,044 GRMZM5G842695 umc1991 Chr1 245,369,017 245,372,021 GRMZM2G369130 umc2047 Chr1 258,442,739 258,446,721 GRMZM2G174170 umc21 Chr6 121,033,833 121,040,632 GRMZM2G008290 umc2181 Chr1 237,715,096 237,717,332 GRMZM2G401331 umc2189 Chr1 271,379,568 271,381,337 GRMZM2G076062 umc2224 Chr1 12,162,857 12,167,581 GRMZM2G110847 umc2226 Chr1 21,780,575 21,788,092 GRMZM2G114055 umc2226 Chr1 21,756,543 21,775,704 Zm00001d028075 umc2226 v4 Chr1 22,053,545 22,070,105 GRMZM2G412430 umc2227 Not joined with LOC100275478 in NCBI/Gene but is in MaizeGDB v4 browser (EHC June 15 2017) Chr1 67,856,797 67,858,961 GRMZM2G125241 umc2228 Chr1 73,974,267 73,976,401 GRMZM2G093962 umc2229 Chr1 80,329,646 80,332,141 GRMZM2G070271 umc2230 Chr1 103,272,931 103,324,927 GRMZM2G017170 umc2231 Chr1 156,233,140 156,235,984 GRMZM5G836886 umc2232 Chr1 164,519,562 164,522,656 GRMZM5G878058 umc2232 Chr1 164,522,853 164,525,776 GRMZM2G428216 umc2233 Chr1 165,420,890 165,421,476 GRMZM2G441903 umc2234 Chr1 187,432,434 187,434,251 GRMZM2G074270 umc2235 Chr1 191,475,413 191,478,860 GRMZM2G017110 umc2236 from alignment to BT085675 Chr1 198,263,544 198,267,076 GRMZM2G133413 umc2237 Chr1 200,759,099 200,762,378 GRMZM2G053299 umc2243 Chr1 296,102,632 296,106,489 GRMZM5G876146 umc2244 Chr1 298,813,792 298,816,795 GRMZM2G019916 umc254 Chr7 156,050,388 156,051,083 GRMZM2G452717 umc255a Chr2 153,139,055 153,143,121 AC233888.1_FG001 umc259a Chr10 127,957,386 127,959,778 GRMZM2G113196 umc2621 Chr1 183,809,704 183,811,177 GRMZM2G123519 umc32a Chr3 1,726,094 1,729,468 GRMZM2G116542 umc44a Chr10 137,339,524 137,341,097 GRMZM5G836567 umc44a Chr10 137,311,826 137,319,567 GRMZM2G134930 umc59a Chr6 86,045,720 86,048,771 GRMZM2G060721 umc64a Chr10 85,759,150 85,760,465 GRMZM2G090747 umc7 Chr8 171,085,827 171,089,416 GRMZM2G001812 umc83a Chr1 233,516,803 233,520,836 GRMZM2G019225 umc85a Chr6 8,272,015 8,277,539 GRMZM2G093776 umc86a Chr1 293,531,158 293,535,465 GRMZM5G880028 umc95 Chr9 127,192,292 127,194,925 GRMZM2G450866 umi11 from: AY679129 Chr7 3,889,069 3,891,403 GRMZM2G149923 umi12 from: AY679130 Chr1 275,154,534 275,157,007 GRMZM2G330302 umi8 from: AY679128. Chr3 213,469,252 213,473,397 GRMZM2G121456 v30 from Arabidopsis clpp1 AB022326 & maize EU967773 Chr9 135,397,438 135,401,073 GRMZM2G067546 vacs1 Classical Gene Chr9 131,423,638 131,431,860 GRMZM2G150616 vdac1a from: EU970195 Chr2 177,290,831 177,294,514 GRMZM2G146670 vdac1b from: AF178951 Chr7 97,642,539 97,646,675 GRMZM2G115049 vdac2 from: EU962130 Chr6 161,642,062 161,645,447 GRMZM2G027219 vde1 Based on homology to Genbank sequence. Chr2 74,716,207 74,718,993 GRMZM2G701673 vde2 Xu et al, 2016 Chr10 106,812,274 106,812,762 GRMZM2G408706 vde3 Xu et al, 2016 Chr8 154,564,180 154,569,605 GRMZM2G415538 vdl1 Chr8 156,348,546 156,364,515 GRMZM2G339151 vim102 Li et al., 2014 Chr8 134,742,942 134,746,904 GRMZM2G461447 vim103 Li et al., 2014 Chr6 44,751,886 44,756,124 AC191534.3_FG003 vim104 Li et al., 2014 Chr7 27,685,032 27,687,705 GRMZM2G111696 voz1 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 159,112,392 159,115,898 GRMZM2G158717 voz2 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 216,402,429 216,405,935 GRMZM2G094081 voz3 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 98,456,978 98,457,972 GRMZM2G156016 voz4 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 198,983,586 198,990,186 GRMZM2G449165 voz5 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 173,825,142 173,828,292 GRMZM2G133398 vp1 Classical Gene Chr3 162,842,569 162,847,653 GRMZM2G067176 vp10 Classical Gene Chr10 146,104,115 146,108,434 GRMZM2G014392 vp14 Classical Gene Chr1 250,953,388 250,956,063 GRMZM2G014392 vp14 from alignment of cDNA sequence on Genome Browser v2 (MS 5/2011) Chr1 250,953,388 250,956,063 GRMZM2G121468 vp15 Classical Gene Chr5 174,261,710 174,266,807 GRMZM2G410515 vp5 Classical Gene Chr1 17,660,122 17,666,235 GRMZM2G410515 vp5 Chr1 17,660,122 17,666,235 GRMZM2G010353 vp8 Classical Gene Chr1 286,390,345 286,398,537 GRMZM2G454952 vp9 Chen et al., 2017 Chr7 17,481,578 17,490,013 GRMZM2G463291 vpe1 Chr5 189,856,260 189,862,512 GRMZM2G014240 vpp1 Classical Gene Chr9 14,328,479 14,333,699 GRMZM2G094497 vpp2 from T18416 Chr9 79,417,971 79,429,946 GRMZM2G421857 vpp3 from: U36436 Chr4 235,983,602 235,992,984 GRMZM2G028432 vpp4 from: EU953141 Chr10 9,542,117 9,544,172 GRMZM2G170927 vpp5 Wang et al., 2016 Chr9 95,183,056 95,188,412 GRMZM2G023858 vps1 Chr5 8,007,214 8,021,382 GRMZM2G140737 vpsh26 Chr10 17,837,806 17,842,618 GRMZM2G127308 vt2 aligns to sequence BK007972 (MLS 2012 MGDB BLAST) Chr8 16,853,232 16,857,380 GRMZM2G035213 vte4 from Lipka et al 2013 Chr5 200,419,844 200,423,666 GRMZM2G480171 w2 Udy et. al., 2012 Chr10 144,030,003 144,038,674 GRMZM2G110242 wab1 from JX122765 and Bai et al., 2012. Chr2 180,630,151 180,631,609 GRMZM2G057243 wc1 Classical Gene Chr9 152,353,213 152,359,196 GRMZM5G878541 wee1 Chr4 239,984,257 239,988,267 GRMZM2G012262 whirly2 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 237,573,503 237,579,217 GRMZM2G151227 whp1 Classical Gene Chr2 224,558,005 224,561,990 GRMZM2G155662 why1 Classical Gene Chr6 71,779,327 71,782,388 GRMZM2G155662 why1 from B73_v2 alignment to cDNA EU595664.1 GI:183229933 (Jul 2011) Chr6 71,779,327 71,782,388 GRMZM2G156632 wip1 Classical Gene Chr8 12,275,985 12,276,693 GRMZM2G112795 wip2 from: T15276 Chr4 20,529,042 20,532,586 Zm00001d022524 wox12a v4 Chr7 179,332,232 179,334,819 GRMZM6G260565 wox4 from: EU964275 Chr10 144,893,352 144,894,218 GRMZM2G133972 wox9a from: AM490240 & assigned to hb50 by the Grassius project, (Yilmaz Chr8 148,836,644 148,840,404 GRMZM2G031882 wox9b from: AM234772 & assigned to hb85 by the Grassius project, (Yilmaz et al 2009) Chr3 210,664,178 210,668,618 GRMZM2G409881 wox9c from: AM490242 & hb117 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 164,845,767 164,849,983 GRMZM2G124524 wri1 from Pouvreau at al 2011 Chr2 149,971,656 149,977,527 GRMZM2G174834 wri2 from Pouvreau et al 2011 Chr4 185,907,968 185,912,697 GRMZM2G398506 wrky1 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 161,329,465 161,340,038 GRMZM2G083717 wrky10 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 299,362,324 299,367,903 GRMZM2G401521 wrky100 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 160,019,664 160,021,008 GRMZM2G123387 wrky101 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 22,124,688 22,129,615 GRMZM2G070211 wrky102 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 253,562,148 253,565,268 GRMZM2G141299 wrky103 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 198,284,414 198,286,315 GRMZM2G169149 wrky104 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 115,576,479 115,577,711 GRMZM2G102583 wrky105 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 79,911,960 79,914,453 GRMZM2G063880 wrky106 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 71,900,055 71,901,434 GRMZM2G018487 wrky107 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 274,947,476 274,951,614 GRMZM2G106560 wrky108 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 222,422,824 222,427,359 GRMZM5G880069 wrky109 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 17,336,230 17,338,997 GRMZM2G138683 wrky11 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 158,888,697 158,893,034 GRMZM2G173680 wrky110 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 116,043,878 116,046,928 GRMZM2G013391 wrky111 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 173,930,578 173,932,078 AC208110.2_FG001 wrky112 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 140,081,545 140,084,417 GRMZM2G147880 wrky113 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 7,879,528 7,883,985 AC209050.3_FG003 wrky114 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 96,492,394 96,493,954 GRMZM2G036703 wrky115 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 169,646,298 169,648,807 GRMZM2G130854 wrky116 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 208,504,961 208,511,327 GRMZM2G453571 wrky117 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 164,999,993 165,002,960 GRMZM2G003551 wrky118 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 18,108,182 18,111,635 GRMZM2G015433 wrky119 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 124,481,009 124,482,168 GRMZM2G164082 wrky12 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 288,766,734 288,768,763 AC165171.2_FG002 wrky120 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 144,777,899 144,779,302 GRMZM2G061408 wrky121 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 109,092,838 109,094,506 GRMZM2G549512 wrky122 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 58,356,325 58,374,672 GRMZM2G105140 wrky123 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 217,543,229 217,545,089 GRMZM2G111711 wrky124 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 104,082,393 104,083,964 GRMZM2G163054 wrky125 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 127,773,579 127,775,131 GRMZM2G156529 wrky13 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 110,609,946 110,610,865 GRMZM2G091331 wrky14 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 140,695,930 140,697,533 GRMZM2G004060 wrky15 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 12,108,516 12,110,234 GRMZM2G063216 wrky16 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 184,812,978 184,816,591 GRMZM2G381378 wrky17 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 173,263,217 173,265,322 GRMZM2G092694 wrky18 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 653,032 655,605 GRMZM2G382350 wrky19 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 185,085,984 185,090,499 GRMZM2G048450 wrky2 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 138,386,996 138,389,124 GRMZM2G414315 wrky20 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 74,420,546 74,421,859 GRMZM2G127064 wrky21 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 135,889,651 135,892,588 GRMZM2G111354 wrky22 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 175,251,100 175,252,414 GRMZM2G400559 wrky23 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 152,320,522 152,321,739 GRMZM2G099593 wrky24 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 152,369,498 152,370,911 GRMZM2G324999 wrky25 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 216,633,236 216,634,880 GRMZM2G083350 wrky26 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 19,856,200 19,858,470 GRMZM2G475984 wrky27 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 8,214,258 8,215,483 GRMZM2G145554 wrky28 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 145,062,095 145,064,464 GRMZM2G040298 wrky29 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 201,085,602 201,087,238 GRMZM2G130374 wrky3 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 167,915,436 167,917,645 GRMZM2G143204 wrky30 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 278,228,862 278,232,499 GRMZM2G008029 wrky31 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 278,669,130 278,671,406 GRMZM2G030272 wrky32 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 52,917,450 52,918,870 GRMZM2G020254 wrky33 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 65,429,005 65,430,793 GRMZM2G057116 wrky34 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 88,471,371 88,472,763 GRMZM2G029292 wrky35 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 169,910,906 169,937,945 GRMZM2G054125 wrky36 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 17,875,436 17,878,321 GRMZM2G139815 wrky37 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 92,417,479 92,419,510 GRMZM2G163418 wrky38 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 176,398,481 176,400,987 AC193630.3_FG003 wrky39 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 19,940,858 19,942,697 GRMZM2G501775 wrky4 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 231,953,985 231,957,372 GRMZM2G158328 wrky40 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 184,905,732 184,908,623 GRMZM2G065290 wrky41 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 184,988,151 184,997,449 GRMZM5G812272 wrky42 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 148,612,740 148,615,433 GRMZM2G148087 wrky43 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 183,944,439 183,947,443 GRMZM2G432583 wrky44 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 118,562,818 118,564,187 GRMZM2G151444 wrky45 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 9,237,045 9,244,979 GRMZM5G823157 wrky46 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 199,697,223 199,700,885 GRMZM2G149683 wrky47 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 144,765,374 144,766,804 GRMZM2G120320 wrky48 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 92,841,738 92,843,574 GRMZM2G006497 wrky49 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 13,139,079 13,140,882 AC194362.3_FG003 wrky5 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 232,080,384 232,081,786 GRMZM2G071907 wrky50 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 11,760,940 11,762,535 GRMZM2G366795 wrky51 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 165,221,558 165,224,020 GRMZM2G151407 wrky52 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 131,319,563 131,323,434 GRMZM2G125653 wrky53 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 115,336,589 115,338,419 GRMZM2G178671 wrky54 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 180,652,901 180,653,592 GRMZM2G057011 wrky55 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 181,270,963 181,272,226 GRMZM2G176489 wrky56 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 8,219,105 8,221,465 GRMZM2G169966 wrky57 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 153,458,471 153,461,535 GRMZM2G076657 wrky58 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 134,942,701 134,950,706 GRMZM2G031963 wrky59 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 124,679,542 124,684,591 GRMZM2G161411 wrky6 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 15,337,856 15,339,461 GRMZM2G383594 wrky60 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 105,958,946 105,960,357 GRMZM2G171428 wrky61 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 124,488,682 124,495,259 GRMZM2G143765 wrky62 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 22,907,413 22,912,048 GRMZM2G005207 wrky63 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 3,995,050 3,997,307 AC198725.4_FG009 wrky64 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 217,293,881 217,296,220 GRMZM2G060918 wrky65 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 133,947,951 133,949,483 GRMZM2G045560 wrky66 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 168,374,785 168,379,461 GRMZM2G090594 wrky67 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 68,737,989 68,739,253 GRMZM2G137802 wrky68 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 135,574,148 135,576,504 GRMZM2G448605 wrky69 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 70,575,003 70,578,661 GRMZM2G354384 wrky7 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 221,361,951 221,362,634 GRMZM2G024898 wrky70 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 12,806,751 12,811,093 GRMZM2G052671 wrky71 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 189,959,952 189,963,986 GRMZM5G816457 wrky72 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 39,388,778 39,394,181 GRMZM2G101405 wrky73 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 203,155,290 203,156,282 GRMZM2G408462 wrky74 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 212,821,185 212,822,609 GRMZM2G425430 wrky75 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 75,177,786 75,179,016 GRMZM2G451035 wrky76 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 184,834,748 184,835,856 GRMZM2G461648 wrky77 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 184,849,931 184,851,199 GRMZM2G073272 wrky78 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 159,271,175 159,272,391 GRMZM2G025895 wrky79 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 93,189,728 93,191,396 GRMZM2G038158 wrky8 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 224,059,974 224,061,852 GRMZM2G516301 wrky80 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 19,839,384 19,840,388 GRMZM2G059562 wrky81 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 184,872,991 184,874,285 GRMZM5G863420 wrky82 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 161,673,003 161,674,439 GRMZM2G012724 wrky83 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 141,604,322 141,606,522 GRMZM2G304573 wrky84 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 139,485,939 139,486,968 GRMZM2G018721 wrky85 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 1,923,485 1,924,841 GRMZM2G411766 wrky86 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 147,544,923 147,546,743 GRMZM2G027972 wrky87 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 198,308,636 198,311,250 GRMZM2G029282 wrky88 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 169,904,229 169,907,044 GRMZM2G034421 wrky89 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 118,496,550 118,498,937 GRMZM2G169564 wrky9 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 184,955,171 184,956,823 GRMZM2G468056 wrky90 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 169,887,391 169,888,449 GRMZM2G441031 wrky91 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 4,035,458 4,036,997 GRMZM2G449681 wrky92 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 109,740,015 109,742,387 GRMZM5G871347 wrky93 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 1,260,777 1,262,611 GRMZM2G148561 wrky94 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 69,945,001 69,946,217 GRMZM2G151763 wrky95 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 211,059,226 211,062,376 GRMZM2G149219 wrky96 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 259,014,756 259,016,110 AC205562.3_FG002 wrky97 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 73,393,297 73,394,259 GRMZM2G377217 wrky98 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 151,097,946 151,109,901 GRMZM2G327349 wrky99 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 49,564,575 49,568,298 GRMZM2G403797 wtf1 Classical Gene Chr8 71,815,346 71,817,424 GRMZM2G403797 wtf1 from B73_v2 alignment to cDNA EU968423 |gi| 195642145 Chr8 71,815,346 71,817,424 AC210013.4_FG013 wtf2 Chr5 3,403,642 3,407,902 GRMZM2G350157 wtf4 Chr4 158,327,464 158,329,034 GRMZM2G043878 wusl1032 from: L14835 Chr1 41,441,065 41,442,219 GRMZM2G024993 wx1 Classical Gene Chr9 23,267,684 23,271,612 GRMZM2G160032 x1 From homology to genbank accessions BT062834.1 and AF434193.1 Chr3 216,426,468 216,435,001 GRMZM2G026980 xet1 homology to U15781 Chr5 53,934,855 53,936,718 GRMZM2G157817 xrcc3 Zhang et al, 2014 Chr5 174,035,742 174,036,908 GRMZM2G119783 xth1 from EU965412 Chr10 69,098,782 69,100,591 GRMZM2G170839 xyl1 Classical Gene Chr1 132,575,709 132,578,475 GRMZM2G031004 xyn10 Olukolu, BA et al. 2016 Chr3 21,267,432 21,270,193 GRMZM2G300348 y1 from B73_v2 alignment to NCBI Reference Sequence: NM_001114652.2 Chr6 82,180,486 82,184,345 GRMZM2G011746 y9 from B73_v2 alignment to Genbank sequence NM_001139248 Chr10 13,613,175 13,616,729 GRMZM2G054795 yab1 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 23,380,099 23,382,093 GRMZM2G167824 yab10 Classical Gene Chr1 225,097,097 225,102,315 GRMZM2G141955 yab11 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 175,665,423 175,671,657 GRMZM2G085873 yab12 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 260,424,101 260,427,079 GRMZM2G005353 yab14 Classical Gene Chr10 133,133,767 133,136,401 GRMZM2G529859 yab15 Classical Gene Chr5 189,249,290 189,252,175 GRMZM2G106204 yab3 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 6,315,293 6,328,611 GRMZM2G046829 yab4 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 159,501,156 159,503,146 GRMZM2G116646 yab5 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 89,439,022 89,445,313 GRMZM2G074124 yab6 from Lin et al 2012 Chr5 16,146,472 16,181,777 GRMZM2G074543 yab9 Classical Gene Chr5 23,592,937 23,597,115 GRMZM2G010196 ycf54 Belcher et al., 2015 Chr1 54,599,336 54,602,391 GRMZM2G086971 ypt1 Classical Gene Chr2 47,740,882 47,746,771 GRMZM2G086971 ypt1 from Cell Genomics Project Chr2 47,740,882 47,746,771 GRMZM2G097728 ypt2 Chr5 191,132,644 191,136,724 GRMZM2G416142 ypt3 from: X77795 Chr4 127,723,181 127,727,534 GRMZM2G097746 ypt4 from: EU960755 Chr5 191,122,611 191,130,012 GRMZM2G156599 ys1 Classical Gene Chr5 190,726,052 190,729,182 GRMZM2G159393 yuc2 Bernardi et al. 2012. Chr10 98,816,289 98,818,353 GRMZM2G107761 yuc3 Bernardi et al. 2012. Chr4 14,185,128 14,208,882 GRMZM2G141383 yuc4 From: Suzuki et al., 2016 Chr2 111,172,433 111,174,381 GRMZM2G132489 yuc5 From: Suzuki et al., 2016 Chr7 38,907,938 38,910,587 GRMZM2G019515 yuc6 From: Suzuki et al., 2016 Chr8 2,897,539 2,904,387 GRMZM2G140016 yy1 Classical Gene Chr4 115,453,280 115,456,159 GRMZM2G114048 yz1 Chr3 216,399,970 216,403,243 GRMZM2G052890 zag1 Classical Gene Chr6 132,008,587 132,016,861 GRMZM2G052890 zag1 Chr6 132,008,587 132,016,861 GRMZM2G160687 zag2 Classical Gene Chr3 137,255,997 137,261,748 GRMZM2G160687 zag2 Chr3 137,255,997 137,261,748 GRMZM2G531231 zag4 Classical Gene Chr9 16,806,164 16,814,207 GRMZM2G003514 zag5 Classical Gene Chr4 156,111,149 156,118,295 GRMZM2G026223 zag6 v2 (was GRMZM2G475390 in v1) Chr1 4,855,703 4,871,281 GRMZM2G148693 zap1 Chr2 236,669,675 236,679,078 GRMZM2G446201 zar1 from Guo et al 2014 Chr10 119,433,276 119,435,009 GRMZM2G137546 zar3 from Guo et al 2014 Chr2 220,671,352 220,673,700 GRMZM2G066029 zar4 Chr6 147,571,950 147,572,995 GRMZM2G175995 zar5 Chr6 3,976,733 3,977,389 GRMZM2G162250 zar6 Chr3 147,629,744 147,637,183 GRMZM2G113583 zar7 Chr5 174,393,336 174,397,308 GRMZM2G354338 zar8 from: JN252302 Chr6 143,057,719 143,058,385 GRMZM2G082943 zar9 Chr3 136,407,881 136,409,285 GRMZM2G127139 zep1 from EU970775 Chr2 45,068,944 45,077,882 GRMZM2G136344 zep2 from CO532283 Chr10 120,802,689 120,805,284 GRMZM2G098813 zfl1 Classical Gene Chr10 140,276,803 140,279,827 GRMZM2G180190 zfl2 Classical Gene Chr2 12,649,206 12,652,213 GRMZM2G180190 zfl2 Chr2 12,649,206 12,652,213 GRMZM2G116079 zfp30 from BT038274 and Entrez Gene Chr4 232,434,818 232,442,130 GRMZM2G068330 zhd1 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 11,278,503 11,281,332 GRMZM2G470974 zhd10 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 2,632,775 2,633,842 GRMZM2G328438 zhd11 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 73,654,879 73,656,447 GRMZM2G417229 zhd12 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 201,282,108 201,284,278 GRMZM2G071112 zhd13 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 112,658,777 112,661,470 GRMZM2G172586 zhd14 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 2,639,262 2,640,147 GRMZM2G089619 zhd15 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 50,140,925 50,142,374 GRMZM2G389379 zhd16 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 188,271,896 188,273,136 GRMZM2G069365 zhd17 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 160,153,804 160,155,930 GRMZM2G462417 zhd18 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 185,816,491 185,819,532 GRMZM2G370863 zhd19 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 85,758,755 85,759,432 GRMZM2G161315 zhd2 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 112,903,752 112,905,463 GRMZM2G051955 zhd20 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 181,822,882 181,824,556 GRMZM5G821755 zhd21 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 136,934,215 136,936,196 GRMZM5G884837 zhd22 from maize Cell Genomics Project (Oct 2013) Chr1 200,897,499 200,899,336 GRMZM2G346920 zhd3 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 200,897,499 200,899,336 GRMZM2G425236 zhd4 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 10,223,283 10,224,485 GRMZM2G438438 zhd5 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 212,577,817 212,579,728 GRMZM2G414844 zhd6 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 166,375,940 166,377,410 GRMZM2G353734 zhd7 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 85,320,866 85,323,592 GRMZM2G423423 zhd8 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 269,147,449 269,148,335 GRMZM2G353076 zhd9 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 230,480,803 230,481,862 GRMZM2G126507 zim1 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 108,871,320 108,874,327 GRMZM2G173596 zim10 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 36,976,140 36,977,007 GRMZM2G122160 zim11 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 11,373,950 11,375,953 GRMZM2G101769 zim12 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 211,875,346 211,877,961 GRMZM2G005954 zim13 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 184,649,167 184,651,569 GRMZM2G036288 zim14 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 150,582,432 150,583,458 GRMZM2G114681 zim15 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 180,086,933 180,089,653 GRMZM2G445634 zim16 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 16,791,540 16,792,462 GRMZM2G327263 zim17 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 231,290,310 231,303,400 GRMZM2G145412 zim18 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 244,885,427 244,886,628 GRMZM2G382794 zim19 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 290,452,059 290,455,157 GRMZM2G065896 zim2 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 8,462,838 8,467,789 GRMZM2G080509 zim20 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 87,858,244 87,863,266 GRMZM2G024680 zim21 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 244,829,629 244,830,954 GRMZM2G110131 zim22 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 30,037,028 30,039,032 GRMZM2G089736 zim23 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 165,496,239 165,498,650 GRMZM2G117513 zim24 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 69,894,564 69,897,090 GRMZM2G314145 zim25 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 107,168,442 107,169,441 GRMZM2G343157 zim26 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 16,776,170 16,777,317 GRMZM5G838098 zim27 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 16,782,463 16,783,895 GRMZM2G116614 zim28 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 121,257,089 121,259,224 GRMZM2G064775 zim29 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 36,785,899 36,787,242 GRMZM2G145458 zim3 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 244,892,947 244,893,692 AC197764.4_FG003 zim30 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 36,853,650 36,854,491 GRMZM2G066020 zim31 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 142,622,294 142,626,934 GRMZM2G086920 zim32 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 4,702,643 4,706,609 GRMZM2G145407 zim33 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 65,326,353 65,328,811 GRMZM2G143402 zim34 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 145,369,299 145,373,351 GRMZM2G151519 zim35 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 80,927,425 80,930,017 GRMZM2G058479 zim36 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 55,956,384 55,961,158 GRMZM2G036351 zim4 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 150,514,712 150,515,694 GRMZM2G054689 zim5 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 64,176,829 64,179,518 GRMZM2G036349 zim6 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 150,518,483 150,519,836 GRMZM2G063632 zim7 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 22,279,974 22,282,078 GRMZM2G171830 zim8 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 97,375,739 97,377,764 GRMZM2G338829 zim9 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 14,014,557 14,015,717 GRMZM2G010669 zmm1 from X81199 Chr10 30,872,196 30,876,367 GRMZM2G553379 zmm15 from: BT065993 Chr5 6,993,294 7,011,505 GRMZM2G110153 zmm16 Chr3 171,471,054 171,473,646 GRMZM2G130382 zmm17 from: BT039031 Chr5 85,114,743 85,115,386 GRMZM5G805387 zmm18 from: BT087013 Chr8 102,542,053 102,545,720 GRMZM2G359952 zmm2 Classical Gene Chr8 22,983,104 22,992,125 GRMZM2G129034 zmm27 from: BT033398 Chr2 192,877,045 192,885,419 GRMZM2G152862 zmm29 from: BT064585 Chr8 102,450,748 102,454,585 AC197699.3_FG001 zmm3 from: Y09301 Chr9 17,021,226 17,024,054 GRMZM2G071620 zmm31 Classical Gene Chr5 6,925,447 6,932,461 GRMZM2G159397 zmm6 Classical Gene Chr1 194,046,502 194,054,589 GRMZM2G097059 zmm7 Chr7 136,296,029 136,307,251 GRMZM2G102161 zmm8 Classical Gene Chr9 146,936,987 146,945,281 GRMZM5G836222 znf1 Classical Gene Chr9 102,483,351 102,485,242 GRMZM2G478553 znf2 Hawkins et al., 2014 Chr9 11,736,162 11,737,986 GRMZM2G048154 znf4 Chr1 42,126,085 42,126,784 GRMZM2G001205 znf5 Chr6 35,061,725 35,062,778 GRMZM5G804618 znf6 Chr3 181,613,553 181,615,034 GRMZM2G086277 znfn1 Chr6 79,660,379 79,662,222 GRMZM2G052562 znod1 Chr9 18,630,211 18,632,350 GRMZM2G008913 zp1 Classical Gene Chr4 29,963,321 29,964,591 GRMZM2G086294 zp15 Classical Gene Chr6 44,541,825 44,542,774 GRMZM2G086294 zp15 from alignment of AF371264.1 GI:16305114 to B73_v2 (MS Jul 2013) Chr6 44,541,825 44,542,774 AF546188.1_FG005 zp2 Yang et al., 2016 Chr7 18,865,424 18,866,146 GRMZM2G044625 zp22.1 from: J01246 Chr4 5,122,439 5,123,472 GRMZM2G138727 zp27 Classical Gene Chr7 120,233,940 120,236,057 GRMZM2G160739 zp3 Yang et al., 2016 Chr4 5,171,933 5,177,135 GRMZM2G404459 zpl2a from: Entrez Gene 606400 Chr4 5,521,259 5,523,302 GRMZM2G158043 zpu1 from: Entrez Gene 541711 Chr2 109,260,299 109,311,620 GRMZM2G106980 zrp2 Chr1 203,686,906 203,693,519 GRMZM2G143590 zyp1 Zhang et al., 2014 Chr10 121,738,153 121,749,667