Newly Characterized Genes

CHECK HERE FOR DESCRIPTIONS OF NEWLY CHARACTERIZED MAIZE GENES!

With the overwhelming number of genes that are being discovered by phenotypic and sequence analyses, the MaizeGDB staff is missing some that should be included in MaizeGDB. We need your help! Please let us know about new genes that you're working on or have recently read about.

MaizeGDB prefers not to assign formal gene names to gene models based purely on orthology. Known difficulties include inclusivity (there are over 10,000 functionally characterized Arabidopsis genes)* and some likelihood of errors in inferred functions. Unlike gene models, gene names are generally conserved unless differently named genes are found to be allelic. Of particular note, naming priveleges are customarily held by researchers who first confirm function.

We encourage researchers to use the annotation tool on the MaizeGDB gene model pages to add their insights about putative function, especially when not currently part of the Phytozome or Gramene pipelines.

Below is a list of newly reported or newly characterized genes (new reference, new gene product, and/or new variation) with which you may not yet be familiar. The genes are sorted by the last time the gene has been updated. To suggest genes for inclusion in this list, email us and include the gene name, full name, chromosome or bin, and a recent reference.

If you cannot find the gene you would like to recommend in the database, send us an email so that we can add it to the database!

This page is based on our monthly release. The updates are made around 4:00am CST.


         Recommended Genes


One month | Six months | One year | All time

New or updated genes since one month ago. The cutoff date is June 21st, 2017.

Last UpdateGeneFull Name : DescriptionChromosome
or Bin
Gene
Model
Recent ReferenceOrthologsUpdate information
yesterdaybnlg2238  :
1.04
GRMZM2G016480
    Variation: September 1st, 2003
Gene Model: July 20th, 2017
yesterdaybnlg2295  :
1.04
GRMZM2G143703
    Variation: September 29th, 2010
Gene Model: July 20th, 2017
yesterdayko1 kaurene oxidase1:
 
GRMZM2G059308
Mao, HJ et al. 2017. Biotechnol Lett pp.doi: 10.1007/s10529-017-2401-7     Reference: July 20th, 2017
Gene Product: October 27th, 2014
Gene Model: October 27th, 2014
yesterdayko2 kaurene oxidase2:
 
GRMZM2G161472
Mao, HJ et al. 2017. Biotechnol Lett pp.doi: 10.1007/s10529-017-2401-7     Reference: July 20th, 2017
Gene Product: October 27th, 2014
Gene Model: October 27th, 2014
2 days agocct1 CO CO-LIKE TIMING OF CAB1 protein domain1: photoperiod response locus; confers later flowering in teosintes under longer day lengths; many maize inbred lines, including some adapted to tropical regions, have cct1 alleles insensitive to photoperiod (Hung et al 2012)
 
GRMZM2G381691
Wang, C et al. 2017. New Phytol pp.doi: 10.1111/nph.14688   AT5G24930 (TAIR)
LOC_Os07g15770 (MSU/TIGR)
Os07g0261200 (Gramene)
Reference: July 19th, 2017
Gene Product: July 17th, 2012
Variation: July 19th, 2017
Gene Model: July 17th, 2012
3 days agolox3 lipoxygenase3:
3.06
   Ogunola, OF et al. 2017. PLoS One 12:e0181265     Reference: July 18th, 2017
Gene Product: June 11th, 2014
Variation: November 14th, 2014
3 days agots1 tassel seed1: tassel pistillate and pendant; if removed, small ear with irregular kernel placement develops
2.04 - 2.05
   Ogunola, OF et al. 2017. PLoS One 12:e0181265     Reference: July 18th, 2017
Gene Product: June 11th, 2014
Variation: June 11th, 2014
3 days agolox10 lipoxygenase10: green leaf volatiles, circadian, herbivore defense; sequence predicts plastidic location; images show location in non-chlorophyll containing organelles
4.09
GRMZM2G018424
Ogunola, OF et al. 2017. PLoS One 12:e0181265     Reference: July 18th, 2017
Gene Product: June 11th, 2014
Variation: June 6th, 2014
Gene Model: October 23rd, 2013
3 days agolox6 lipoxygenase6:
2.02
GRMZM2G040095
Ogunola, OF et al. 2017. PLoS One 12:e0181265     Reference: July 18th, 2017
Gene Product: June 11th, 2014
Variation: June 11th, 2014
Gene Model: June 10th, 2014
3 days agolox1 lipoxygenase1: Full length cDNA is expressed in E. coli (Kim et al. 2003)
3.06
   Ogunola, OF et al. 2017. PLoS One 12:e0181265     Reference: July 18th, 2017
Gene Product: November 13th, 2014
Variation: July 24th, 2008
3 days agolox2 lipoxygenase2:
3.06
GRMZM2G156861
Ogunola, OF et al. 2017. PLoS One 12:e0181265     Reference: July 18th, 2017
Gene Product: June 11th, 2014
Variation: July 18th, 2017
Gene Model: June 10th, 2014
3 days agolox4 lipoxygenase4:
1.09
GRMZM2G109056
Ogunola, OF et al. 2017. PLoS One 12:e0181265     Reference: July 18th, 2017
Gene Product: June 11th, 2014
Variation: June 11th, 2014
Gene Model: June 10th, 2014
3 days agolox5 lipoxygenase5:
5.02
GRMZM2G102760
Ogunola, OF et al. 2017. PLoS One 12:e0181265     Reference: July 18th, 2017
Gene Product: June 11th, 2014
Variation: June 11th, 2014
Gene Model: June 10th, 2014
3 days agolox7 lipoxygenase7:
10.04
GRMZM2G070092
Ogunola, OF et al. 2017. PLoS One 12:e0181265     Reference: July 18th, 2017
Gene Product: June 11th, 2014
Variation: April 23rd, 2009
Gene Model: June 10th, 2014
3 days agolox9 lipoxygenase9:
1.02
GRMZM2G017616
Ogunola, OF et al. 2017. PLoS One 12:e0181265     Reference: July 18th, 2017
Gene Product: June 11th, 2014
Variation: June 12th, 2014
Gene Model: October 23rd, 2013
3 days agolox11 lipoxygenase11:
5.04
GRMZM2G009479
Ogunola, OF et al. 2017. PLoS One 12:e0181265     Reference: July 18th, 2017
Gene Product: June 11th, 2014
Variation: June 10th, 2014
Gene Model: June 10th, 2014
3 days agolox12 lipoxygenase12: single copy, required for resistance to Fusarium stalk and ear rot
3.04
GRMZM2G106748
Ogunola, OF et al. 2017. PLoS One 12:e0181265     Reference: July 18th, 2017
Gene Product: November 13th, 2014
Variation: August 15th, 2014
Gene Model: June 10th, 2014
3 days agolox13 lipoxygenase13:
 
GRMZM5G822593
Ogunola, OF et al. 2017. PLoS One 12:e0181265     Reference: July 18th, 2017
Gene Product: June 11th, 2014
Gene Model: July 18th, 2017
6 days agopspb2 photosystem II oxygen evolving polypeptide2: sequence highly similar to OEC23 oxygen evolving complex protein of photosystem II; located peripheral to lumenal side of thylakoid (Huang et al 2013)
 
GRMZM2G047954
Huang, M et al. 2013. J Proteome Res 12:491-504     Reference: August 5th, 2014
Gene Product: September 1st, 2003
Gene Model: July 15th, 2017
6 days agopspb1 photosystem II oxygen evolving polypeptide1: sequence similar to OEC23 photosystem II polypeptide; located by Huang et al 2013 to thylakoid peripheral on lumen side
 
GRMZM2G016677
Huang, M et al. 2013. J Proteome Res 12:491-504     Reference: August 5th, 2014
Gene Product: September 1st, 2003
Gene Model: July 15th, 2017
7 days agobnlg1564  :
1.07
GRMZM5G821828
    Variation: September 1st, 2003
Gene Model: July 14th, 2017
8 days agoumc1627  : cDNA sequences; SSR umc1627; see also loci probed by umc171 and npi472
8.03
GRMZM2G156857
Sheen, J et al. 1987. Plant Mol Biol 9:217-226     Reference: September 1st, 2003
Variation: July 13th, 2017
Gene Model: July 14th, 2015
8 days agoifa1 indeterminate floral apex1: mutants have perturbed floral and inflorescence meristems as well as droopy leaves with increased angle
 
GRMZM2G088309
Strable, J et al. 2017. Plant Cell pp.doi: 10.1105/tpc.16.00477   AT1G69180 (TAIR)
LOC_Os03g11600 (MSU/TIGR)
Reference: July 12th, 2017
Gene Product: October 16th, 2015
Variation: July 13th, 2017
Gene Model: October 16th, 2015
9 days agobnlg1484  :
1.03
GRMZM2G019567
    Variation: September 1st, 2003
Gene Model: July 12th, 2017
9 days agobnlg1556  :
1.07
GRMZM2G028726
    Variation: September 1st, 2003
Gene Model: July 12th, 2017
9 days agodrl2 drooping leaf2: mutant enhances the phenotype of ifa1 mutants (a.k.a. drl1)
9.06
GRMZM2G102218
Strable, J et al. 2017. Plant Cell pp.doi: 10.1105/tpc.16.00477   AT1G69180 (TAIR)
LOC_Os03g11600 (MSU/TIGR)
Reference: July 12th, 2017
Gene Product: October 16th, 2015
Variation: July 12th, 2017
Gene Model: October 16th, 2015
10 days agobnlg1014  :
1.01
GRMZM2G020548
    Variation: September 1st, 2003
Gene Model: July 11th, 2017
10 days agobnlg1025  :
1.07
GRMZM2G078088
    Variation: September 1st, 2003
Gene Model: July 11th, 2017
10 days agobnlg1331  :
1.09
GRMZM2G466385
    Variation: September 1st, 2003
Gene Model: July 11th, 2017
12 days agoelfg1 elongation factor gamma1: endosperm cDNA 5C04C04 (uaz161), similar to Trypanosoma translation factor
6.04
   Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: September 1st, 2003
Variation: July 9th, 2017
12 days agoelfa11 elongation factor alpha11:
 
AC233866.1_FG006
    Variation: July 9th, 2017
Gene Model: July 8th, 2017
13 days agoms7 male sterile7: like ms2; tapetal cell dysfunction
7.02
GRMZM5G890224
Zhang, DF et al. 2017. Plant Biotechnol J pp.doi: 10.1111/pbi.12786   AT5G22260 (TAIR)
LOC_Os09g27620 (MSU/TIGR)
Os09g0449000 (Gramene)
Reference: July 6th, 2017
Gene Product: July 8th, 2017
Variation: July 6th, 2017
Gene Model: July 6th, 2017
13 days agoiaa28 Aux/IAA-transcription factor 28: gene product physically interacts with LA1 (Dong et al 2013)Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Dong, Z, et al. 2013. Plant Physiol. 163:1306-1322     Reference: November 22nd, 2013
Variation: July 8th, 2017
13 days agodof47 C2C2-Dof-transcription factor 1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Chen, Y; Cao, J. 2014. Plant Mol Biol Rep pp.doi: 10.1007/s11105-014-0835-9     Reference: November 26th, 2014
Variation: July 8th, 2017
13 days agoelfa1 elongation factor alpha1: (was csu116) multiple copies; leaf cDNA csu116, partial sequence identical to a tomato elongation factor
8.03
GRMZM2G151193
Berberich, T et al. 1995. Plant Mol Biol 29:611-615     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: July 8th, 2017
Gene Model: July 8th, 2017
13 days agoeif2 elongation initiation factor2: etiolated leaf cDNA 6C02E11(uaz224) similar to eIF-2 gamma chain
7.04
GRMZM2G107654
Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: September 1st, 2003
Variation: July 8th, 2017
Gene Model: January 13th, 2015
13 days agocyp13 cytochrome P450 13: encodes CYP97A
 
GRMZM5G837869
Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851     Reference: May 23rd, 2017
Gene Product: April 8th, 2013
Variation: July 8th, 2017
Gene Model: April 8th, 2013
14 days agoccamk1 calcium/calmodulin dependent protein kinase1: involved in ABA signaling (Ma et al 2012)
 
GRMZM2G062772
Ma, F; et al. 2012. J Exp Bot. 63:4835-47     Reference: April 23rd, 2013
Gene Product: December 3rd, 2013
Variation: July 7th, 2017
Gene Model: April 23rd, 2013
14 days agoarftf11 ARF-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Petsch, KA et al. 2015. Plant Cell pp.doi: 10.1105/tpc.15.00194     Reference: July 27th, 2015
Variation: July 7th, 2017
14 days agoarftf23 ARF-transcription factor 23: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Petsch, KA et al. 2015. Plant Cell pp.doi: 10.1105/tpc.15.00194     Reference: July 27th, 2015
Variation: July 7th, 2017
14 days agoarftf26 ARF-transcription factor 26: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Petsch, KA et al. 2015. Plant Cell pp.doi: 10.1105/tpc.15.00194     Reference: July 27th, 2015
Variation: July 7th, 2017
14 days agofea4 fasciated ear4: Mutants are semidwarfed with fasciated ears and tassels as well as greatly enlarged vegetative and inflorescence meristems.
 
   Zhou, LZ et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.01.012     Reference: February 13th, 2017
Gene Product: January 27th, 2015
Variation: July 7th, 2017
14 days agouce1 ubiquitin conjugating enzyme1: endosperm cDNA 2C06C11 (uaz102), similar to plant ubiquitin conjugating enzymes
1.08
GRMZM2G053764
Helentjaris, T et al. 1994. MNL 68:101-104     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: July 7th, 2017
Gene Model: July 7th, 2017
14 days agoimp1 importin1: leaf cDNA csu244 similar to importin
8.03
   Baysdorfer, C. 1994. cDNA sequence submission to dbEST     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: July 7th, 2017
14 days agombd119 methyl binding domain119:
1.06
GRMZM2G301098
Springer, N; Kaeppler, SM. 2005. Plant Physiol 138:92-104     Reference: February 3rd, 2010
Gene Product: December 24th, 2015
Variation: February 6th, 2010
Gene Model: July 7th, 2017
14 days agocax3 calcium exchanger3: Expression affected by ABP4, auxin, and Ca++. Homolog of Arabidopsis CAX1 involved in auxin transduction pathway.
3.09
GRMZM2G011592
Jurisic-Knezev, D; Bergougnoux, V; Milde, D; Fellner, M. 2014. Botany. 92:332-339     Reference: June 5th, 2014
Variation: July 7th, 2017
Gene Model: June 6th, 2014
14 days agouce6 ubiquitin conjugating enzyme6:
 
GRMZM2G018447
    Gene Product: September 1st, 2003
Variation: July 7th, 2017
Gene Model: July 7th, 2017
14 days agoao2 aldehyde oxidase2:
5.01
GRMZM5G899851
Owens, BF, et al. 2014. Genetics. 198:1699-1716     Reference: January 1st, 2015
Gene Product: October 4th, 2014
Gene Model: July 7th, 2017
14 days agoabh4 abscisic acid 8'-hydroxylase4:
7.02
GRMZM2G065928
Vallabhaneni, R; Wurtzel, E. 2010. Arch Biochem Biophys. 504:112-7     Reference: February 15th, 2013
Gene Product: February 15th, 2013
Variation: March 31st, 2005
Gene Model: July 7th, 2017
14 days agocenH3 centromeric histone H3:
6.06
GRMZM2G158526
Gent, JI; Wang, N; Dawe, RK. 2017. Genome Biol. 18:121     Reference: July 7th, 2017
Gene Product: December 24th, 2015
Variation: November 7th, 2012
Gene Model: October 24th, 2011
15 days agocpps2 copalyl diphosphate synthase2: encodes ent-kaurene synthase, a copalyl diphosphate synthase protein having close identity with An1 gene product; likely duplicate function explains why an1 plants are not fully dwarfed (Harris et al. 2005)
1.04
GRMZM2G044481
Hu, SL et al. 2017. Frontiers Plant Sci 8:1039     Reference: July 6th, 2017
Gene Product: August 16th, 2012
Variation: December 28th, 2015
Gene Model: September 12th, 2011
Recommended by Ed Coe:
January 8th, 2008
15 days agoga2ox1 gibberellin 2-oxidase1: Bolduc and Hake (Plant Cell 21:1647-58, 2009) identify this ga2ox as ga2ox1 by phylogeny. See Supplemental Figure 6. Comparison of syntenic regions containing ga2ox1 in different grasses. They also show that it is a direct target of KN1.
 
GRMZM2G078798
Hu, SL et al. 2017. Frontiers Plant Sci 8:1039     Reference: July 6th, 2017
Gene Product: October 27th, 2014
Variation: November 20th, 2012
Gene Model: November 20th, 2012
15 days agobnl9.11b(lts)  :
1.04
GRMZM2G067371
    Gene Product: September 1st, 2003
Gene Model: July 6th, 2017
15 days agobhlh43 bHLH-transcription factor 43: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.08
GRMZM2G165042
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: July 6th, 2017
15 days agopif3 phytochrome interacting factor3: ortholog of Arabidopsis PIF3; nuclear localized protein; transgenic expression in rice suggest role in stress response (Gao Y et al 2015)
 
GRMZM2G387528
Hu, SL et al. 2017. Frontiers Plant Sci 8:1039   AT1G09530 (TAIR)
LOC_Os05g04740 (MSU/TIGR)
Reference: July 6th, 2017
Gene Product: September 14th, 2016
Gene Model: May 26th, 2015
15 days agoga20ox5 gibberellin 20-oxidase5:
 
GRMZM2G060940
Hu, SL et al. 2017. Frontiers Plant Sci 8:1039     Reference: July 6th, 2017
Gene Product: October 28th, 2014
Variation: July 6th, 2017
Gene Model: October 27th, 2014
15 days agokao2 kaurenoic acid oxidase2:
 
GRMZM2G089803
Hu, SL et al. 2017. Frontiers Plant Sci 8:1039     Reference: July 6th, 2017
Gene Product: August 15th, 2012
Gene Model: October 29th, 2014
15 days agobrc1 brassinosteroid catabolism1: member of BR catabolic gene family
 
GRMZM2G107322
Hu, SL et al. 2017. Frontiers Plant Sci 8:1039   AT2G26710 (TAIR)
LOC_Os02g11020 (MSU/TIGR)
Reference: July 6th, 2017
Gene Product: July 6th, 2017
Gene Model: July 6th, 2017
15 days agobrc2 brassinosteroid catabolism2: member of BR catabolic gene family
 
GRMZM5G852663
Hu, SL et al. 2017. Frontiers Plant Sci 8:1039   AT2G26710 (TAIR)
LOC_Os02g11020 (MSU/TIGR)
Reference: July 6th, 2017
Gene Product: July 6th, 2017
Gene Model: July 6th, 2017
16 days agouaz248a(his3)  :
1.04
GRMZM2G176358
Helentjaris, T. 1994. Nucleotide sequence submission to dbEST/GenBank     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: July 5th, 2017
Gene Model: July 5th, 2017
16 days agouaz248b(his3)  :
5.05
GRMZM2G176358
Shen, B; Carneiro, N; Torres-Jerez, I; Stevenson, B; McCreery, T; Helentjaris, T; Baysdorfer, C; Alm. 1994. Plant Mol Biol 26:1085-1101     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Gene Model: July 5th, 2017
21 days agosdg110b  :
2.06
   Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
21 days agocrr8 cytokinin response regulator8:
1.02
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 30th, 2017
Variation: April 25th, 2008
21 days agocrr2 cytokinin response regulator2: single copy, cDNA and genomic sequences; SSRs umc1569, umc1344; induced by cytokinin, and inorganic nitrogen
10.07
   Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: June 30th, 2017
Variation: October 1st, 2015
21 days agocrr1 cytokinin response regulator1: single copy,cDNA and genomic sequences; induced in leaf by cytokinin, and inorganic nitrogen; SSR umc1622
2.01 - 2.01
GRMZM2G040736
Deji, A et al. 2002. Biosci Biotechnol Biochem 66: 1853-1858     Reference: July 14th, 2007
Gene Product: June 30th, 2017
Gene Model: October 23rd, 2013
21 days agoarr1 ARR-B-transcription factor 1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 30th, 2017
21 days agoarr2 ARR-B-transcription factor 2: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 30th, 2017
21 days agoarr4 ARR-B-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 30th, 2017
21 days agoarr5 ARR-B-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 30th, 2017
21 days agoarr6 ARR-B-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 30th, 2017
21 days agoarr7 ARR-B-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 30th, 2017
21 days agosdg128 set domain gene128: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Chen, LQ et al. 2017. Plant Physiol 174:1795-1806   LOC_Os09g04890 (MSU/TIGR) Reference: June 29th, 2017
Gene Product: June 30th, 2017
Variation: June 29th, 2017
21 days agomez1 enhancer of zeste1:
6.01
   Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: June 30th, 2017
Variation: July 3rd, 2015
21 days agomez2 enhancer of zeste2:
9.04
GRMZM5G875502
Springer, N et al. 2002. Plant Physiol 128:1332-1345     Reference: January 5th, 2011
Gene Product: June 30th, 2017
Variation: September 1st, 2003
Gene Model: July 28th, 2016
21 days agomez3 enhancer of zeste3:
1.03
GRMZM2G043484
Springer, N et al. 2002. Plant Physiol 128:1332-1345     Reference: January 5th, 2011
Gene Product: June 30th, 2017
Variation: September 1st, 2014
Gene Model: September 2nd, 2014
21 days agosdg101 set domain gene101:
7.02
AC233961.1_FG001
Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: June 29th, 2017
Gene Model: June 29th, 2017
21 days agosdg102 set domain gene102:
2.04
GRMZM2G147619
Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: September 1st, 2003
Gene Model: June 29th, 2017
21 days agosdg104 SET domain-containing protein SET104:
2.03
   Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: September 1st, 2003
21 days agosdg105 set domain gene105:
8.05 - 8.05
   Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: June 29th, 2017
21 days agosdg106 set domain gene106:
2.07
GRMZM2G409213
Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: September 1st, 2003
Gene Model: June 29th, 2017
21 days agosdg107 set domain gene107:
2.03
GRMZM2G357972
Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: September 1st, 2003
Gene Model: June 29th, 2017
21 days agosdg108 set domain gene108:
4.04
GRMZM2G149153
Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: September 1st, 2003
Gene Model: June 29th, 2017
21 days agosdg110a set domain gene110a:
7.02
GRMZM2G130910
Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: September 1st, 2003
Gene Model: June 29th, 2017
21 days agosdg111 set domain gene111:
6.06
GRMZM2G117458
Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: September 1st, 2003
Gene Model: June 29th, 2017
21 days agosdg113 set domain gene113:
3.06
   Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: September 1st, 2003
21 days agosdg115 set domain gene115:
3.08
GRMZM2G033350
Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: September 1st, 2003
Gene Model: June 29th, 2017
21 days agosdg116 set domain gene116:
2.07
GRMZM2G105869
Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: September 1st, 2003
Gene Model: June 29th, 2017
21 days agosdg118 set domain gene118:
8.06
GRMZM2G054380
Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: September 1st, 2003
Gene Model: June 29th, 2017
21 days agosdg119 set domain gene119:
2.06
   Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: September 1st, 2003
21 days agosdg123 SET domain protein123: histone methylation; one of 3 with disrupted (S-ET) domains among 22 SET domain proteins
1.08
GRMZM2G080462
Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: February 2nd, 2015
Gene Model: February 2nd, 2015
21 days agosdg129 set domain gene129:
5.03
GRMZM2G305124
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 30th, 2017
Variation: September 1st, 2003
Gene Model: June 29th, 2017
21 days agosdg122 set domain gene122:
1.02
GRMZM2G091916
Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: June 29th, 2017
Gene Model: June 29th, 2017
21 days agocrr7 cytokinin response regulator7:
 
GRMZM2G096171
Asakura, Y, et al. 2003. Plant Mol Biol. 52:331-341     Reference: August 9th, 2004
Gene Product: June 30th, 2017
Gene Model: December 19th, 2015
21 days agoatx3 arabidopsis trithorax homolog3:
 
GRMZM2G372928
Chen, LQ et al. 2017. Plant Physiol 174:1795-1806   AT4G27910 (TAIR)
LOC_Os01g11952 (MSU/TIGR)
Reference: June 29th, 2017
Gene Product: June 30th, 2017
Gene Model: June 29th, 2017
21 days agoatx4 arabidopsis trithorax homolog4:
 
GRMZM2G085266
Chen, LQ et al. 2017. Plant Physiol 174:1795-1806   AT4G27910 (TAIR)
LOC_Os01g11952 (MSU/TIGR)
Reference: June 29th, 2017
Gene Product: June 30th, 2017
Gene Model: June 29th, 2017
21 days agoatx5 arabidopsis trithorax homolog5:
 
GRMZM2G179814
Chen, LQ et al. 2017. Plant Physiol 174:1795-1806   AT4G27910 (TAIR)
LOC_Os01g46700 (MSU/TIGR)
Reference: June 29th, 2017
Gene Product: June 30th, 2017
Variation: June 29th, 2017
Gene Model: June 29th, 2017
21 days agosdg117 set domain gene117:
 
GRMZM2G172427
Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Gene Model: June 29th, 2017
21 days agosdg127 set domain gene127:
 
GRMZM2G473138
Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Gene Model: June 29th, 2017
21 days agosdg130 set domain gene130:
 
GRMZM2G457881
Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: June 29th, 2017
Gene Model: June 29th, 2017
21 days agoarr8 ARR-B-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.08
GRMZM2G479110
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 30th, 2017
Variation: June 30th, 2017
Gene Model: June 30th, 2017
21 days agocrr5 cytokinin response regulator5:
3.05
   Asakura, Y, et al. 2003. Plant Mol Biol. 52:331-341     Reference: August 9th, 2004
Gene Product: June 30th, 2017
Variation: March 31st, 2005
21 days agosdg103 SET domain group 103:
 
GRMZM2G074094
Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Gene Model: June 29th, 2017
21 days agocrr4 cytokinin response regulator4:
8.06
GRMZM2G319187
Asakura, Y, et al. 2003. Plant Mol Biol. 52:331-341     Reference: August 9th, 2004
Gene Product: June 30th, 2017
Gene Model: December 19th, 2015
21 days agoasg75  : NCBI: similar to Arabidopsis lipase class 3 family protein
1.04
GRMZM5G882821
Grant, D et al. 1993. MNL 67:55-61     Reference: September 1st, 2003
Variation: September 19th, 2009
Gene Model: June 30th, 2017
27 days agorte1 rotten ear1: mutants show distinct defects in vegetative and reproductive development, eventually causing widespread sterility in its tassel and ear.
1.05
GRMZM2G166159
Chatterjee, M et al. 2017. Genetics pp.doi: 10.1534/genetics.116.198275     Reference: June 24th, 2017
Gene Product: June 24th, 2017
Variation: July 21st, 2014
Gene Model: July 19th, 2014
27 days agorte2 rotten ear2: mutants strongly enhance the phenotype of rte1 mutants in soils with low boron content, producing shorter plants that fail to form all reproductive structures
 
GRMZM2G082203
Chatterjee, M et al. 2017. Genetics pp.doi: 10.1534/genetics.116.198275     Reference: June 24th, 2017
Gene Product: June 24th, 2017
Variation: June 24th, 2017
Gene Model: June 24th, 2017
27 days agorte3 rotten ear3: phylogenetically related to Class II clade boron transporters
 
GRMZM2G051753
Chatterjee, M et al. 2017. Genetics pp.doi: 10.1534/genetics.116.198275     Reference: June 24th, 2017
Gene Product: June 24th, 2017
Variation: June 24th, 2017
Gene Model: June 24th, 2017
27 days agorte4 rotten ear4: phylogenetically related to Class II clade boron transporters
 
GRMZM2G374989
Chatterjee, M et al. 2017. Genetics pp.doi: 10.1534/genetics.116.198275     Reference: June 24th, 2017
Gene Product: June 24th, 2017
Gene Model: June 24th, 2017
27 days agorte5 rotten ear5: phylogenetically related to Class II clade boron transporters
 
GRMZM2G302559
Chatterjee, M et al. 2017. Genetics pp.doi: 10.1534/genetics.116.198275     Reference: June 24th, 2017
Gene Product: June 24th, 2017
Gene Model: June 24th, 2017
27 days agorte6 rotten ear6: phylogenetically related to Class II clade boron transporters
 
GRMZM2G454327
Chatterjee, M et al. 2017. Genetics pp.doi: 10.1534/genetics.116.198275     Reference: June 24th, 2017
Gene Product: June 24th, 2017
Gene Model: June 24th, 2017
28 days agoali1 aladin1:
 
       Variation: June 23rd, 2017

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