Gene Model ID Gene Symbol Source Chromosome Start End GRMZM2G026930 a1 Classical Gene Chr3 216,386,031 216,387,865 Zm00001d044122 a1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 219,867,858 219,869,656 GRMZM2G345717 a2 Classical Gene Chr5 66,136,522 66,139,360 Zm00001d014914 a2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 68,025,894 68,027,081 GRMZM2G013726 a4 Classical Gene Chr8 145,645,771 145,647,394 Zm00001d011438 a4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 150,482,983 150,484,456 GRMZM5G817886 aaa1 Chr2 10,216,755 10,222,011 Zm00001d002326 aaa1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 10,330,318 10,335,434 GRMZM2G120302 aap1 Chr9 7,579,688 7,587,102 Zm00001d044916 aap1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 7,175,186 7,182,490 GRMZM2G136910 aasr1 from Virlouvet et al 2011 Chr10 8,852,553 8,853,933 Zm00001d023529 aasr1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 8,781,222 8,782,218 GRMZM5G854138 aasr2 from Virlouvet et al 2011 Chr2 139,700,113 139,701,207 Zm00001d004843 aasr2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 143,855,973 143,857,138 GRMZM2G044132 aasr3 from Virlouvet et al 2011 Chr2 54,473,360 54,474,872 Zm00001d003712 aasr3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 55,894,819 55,896,267 GRMZM2G052100 aasr5 from Virlouvet et al 2011 Chr10 116,077,391 116,078,438 Zm00001d025401 aasr5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 117,126,777 117,127,673 GRMZM2G057841 aasr6 from Virlouvet et al 2011 Chr5 171,162,247 171,162,872 Zm00001d016760 aasr6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 175,170,002 175,170,821 GRMZM2G014797 aasr7 from Virlouvet et al 2011 Chr3 65,662,114 65,662,673 Zm00001d040786 aasr7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 65,871,460 65,871,780 GRMZM2G314075 aasr8 from Virlouvet et al 2011 Chr3 65,665,421 65,666,059 Zm00001d040785 aasr8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 65,868,063 65,868,371 GRMZM2G383699 aasr9 from Virlouvet et al 2011 Chr3 65,739,867 65,740,452 Zm00001d040787 aasr9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 65,889,207 65,889,515 GRMZM2G157369 abc1 Chr4 171,570,493 171,575,379 Zm00001d051915 abc1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 174,610,009 174,614,912 GRMZM2G105570 abcf1 Chr2 229,565,962 229,569,990 Zm00001d007597 abcf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 235,972,116 235,976,132 GRMZM2G177812 abcg11 Belcher et al., 2015 Chr2 24,498,593 24,503,843 Zm00001d002871 abcg11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 25,171,106 25,176,433 GRMZM2G179147 abh1 aligns to sequence DR806072 Chr5 200,705,194 200,707,991 Zm00001d017762 abh1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 206,138,068 206,140,902 GRMZM2G126505 abh2 aligns to sequence CD433445 Chr4 159,692,123 159,694,949 Zm00001d051554 abh2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 162,654,597 162,657,413 GRMZM2G105954 abh3 aligns to sequence EU964577 Chr4 57,970,815 57,976,241 Zm00001d050021 abh3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 60,281,640 60,287,213 GRMZM2G065928 abh4 aligns to sequence EC904849 Chr7 126,008,605 126,011,545 Zm00001d020717 abh4 Chr7 129,916,943 129,919,846 GRMZM2G002142 abh5 aligns to sequence CD941324 Chr2 186,842,961 186,845,670 Zm00001d005889 abh5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 191,792,061 191,795,245 AC193767.3_FG003 abi10 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 148,761,047 148,762,234 Zm00001d026694 abi10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 150,074,342 150,075,529 GRMZM2G065478 abi11 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 165,089,891 165,092,452 Zm00001d030908 abi11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 166,746,593 166,757,849 GRMZM2G102059 abi12 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 15,033,794 15,035,837 Zm00001d002562 abi12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 15,448,580 15,449,809 GRMZM2G018336 abi13 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 28,659,785 28,661,138 Zm00001d011639 abi13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 157,135,997 157,137,214 GRMZM2G106673 abi14 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 26,518,896 26,526,586 Zm00001d049369 abi14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 28,013,684 28,016,851 GRMZM2G361376 abi15 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 232,108,213 232,112,166 GRMZM2G024948 abi16 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 196,729,019 196,731,042 Zm00001d017618 abi16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 201,875,376 201,876,644 GRMZM2G017187 abi17 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 48,136,356 48,141,220 Zm00001d003601 abi17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 49,476,573 49,482,029 GRMZM2G019956 abi18 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 18,152,128 18,154,870 Zm00001d013723 abi18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 18,591,711 18,594,476 GRMZM2G035701 abi19 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 154,216,668 154,220,485 Zm00001d011712 abi19 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 159,488,658 159,493,031 GRMZM2G018485 abi2 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 134,624,802 134,626,574 Zm00001d026005 abi2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 135,849,250 135,850,464 GRMZM2G313737 abi20 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 155,378,968 155,387,313 Zm00001d011745 abi20 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 160,627,041 160,632,198 GRMZM2G126194 abi21 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 109,396,005 109,397,093 Zm00001d025233 abi21 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 110,237,211 110,238,274 GRMZM2G008356 abi22 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 157,708,697 157,716,763 Zm00001d021790 abi22 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 163,070,121 163,078,254 GRMZM2G180168 abi23 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 78,160,467 78,161,649 Zm00001d024545 abi23 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 77,547,497 77,548,246 GRMZM2G088413 abi24 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 254,478,910 254,482,162 Zm00001d033314 abi24 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 258,696,000 258,705,544 GRMZM2G344521 abi25 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 254,590,445 254,594,484 Zm00001d033324 abi25 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 259,037,229 259,041,582 GRMZM2G423393 abi26 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 67,375,028 67,375,918 Zm00001d024354 abi26 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 66,471,477 66,472,334 GRMZM2G123461 abi27 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 180,722,884 180,724,089 Zm00001d031225 abi27 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 182,664,294 182,665,524 GRMZM2G109879 abi28 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 103,802,791 103,809,253 Zm00001d004358 abi28 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 106,081,084 106,087,544 GRMZM2G084173 abi29 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 68,219,540 68,224,677 Zm00001d036079 abi29 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 70,988,040 70,992,940 GRMZM2G149940 abi3 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 1,684,944 1,691,150 Zm00001d001838 abi3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 1,675,459 1,681,671 GRMZM2G088427 abi30 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 254,487,577 254,489,679 GRMZM2G177244 abi31 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 165,897,795 165,900,405 Zm00001d042460 abi31 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 168,475,311 168,480,286 GRMZM2G158162 abi32 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 173,216,702 173,223,537 Zm00001d022440 abi32 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 177,716,517 177,723,636 GRMZM2G065538 abi33 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 152,001,159 152,002,001 GRMZM2G125095 abi34 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 83,653,655 83,654,919 Zm00001d029749 abi34 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 85,320,646 85,321,467 GRMZM5G834874 abi35 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 181,252,639 181,256,424 Zm00001d017112 abi35 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 185,773,130 185,777,679 GRMZM2G001048 abi36 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 14,748,387 14,751,790 Zm00001d049094 abi36 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 15,846,668 15,849,827 GRMZM2G027253 abi37 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 56,611,496 56,612,170 Zm00001d035903 abi37 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 59,081,485 59,082,159 GRMZM2G142999 abi38 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 125,822,461 125,823,598 Zm00001d047359 abi38 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 127,613,899 127,614,732 GRMZM2G172621 abi39 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 217,651,494 217,673,563 Zm00001d007173 abi39 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 223,808,167 223,823,179 GRMZM2G098063 abi4 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 254,460,346 254,462,461 Zm00001d033313 abi4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 258,663,739 258,665,853 GRMZM2G328742 abi40 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 189,990,840 189,992,872 Zm00001d052591 abi40 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 193,980,224 193,982,206 GRMZM5G805685 abi41 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 6,074,814 6,076,964 Zm00001d023446 abi41 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 5,747,841 5,749,899 GRMZM2G098443 abi42 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 96,201,480 96,202,346 Zm00001d010077 abi42 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 98,485,716 98,486,495 GRMZM2G028794 abi43 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 150,250,653 150,252,625 Zm00001d048244 abi43 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 153,119,353 153,121,492 GRMZM2G405170 abi44 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 44,129,684 44,130,359 Zm00001d024103 abi44 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 45,381,410 45,382,084 GRMZM2G174610 abi45 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 154,832,684 154,837,678 Zm00001d038504 abi45 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 158,797,382 158,802,161 GRMZM2G065496 abi46 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 165,085,207 165,088,108 Zm00001d030907 abi46 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 166,741,910 166,744,810 GRMZM2G125596 abi47 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 195,559,254 195,562,953 Zm00001d052750 abi47 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 199,667,552 199,671,247 GRMZM2G111123 abi48 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 221,999,802 222,002,668 Zm00001d044355 abi48 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 225,696,574 225,699,290 GRMZM2G405699 abi49 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 267,970 270,851 Zm00001d034965 abi49 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 290,046 293,456 GRMZM2G320754 abi5 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 18,103,497 18,105,325 Zm00001d013722 abi5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 18,543,126 18,544,969 GRMZM2G102938 abi50 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 57,753,651 57,755,275 Zm00001d035922 abi50 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 60,326,794 60,331,273 GRMZM2G173321 abi51 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 65,200,137 65,213,038 Zm00001d024321 abi51 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 64,378,201 64,379,576 GRMZM2G160224 abi6 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 25,616,688 25,619,269 GRMZM2G109480 abi7 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 17,698,816 17,700,801 Zm00001d027939 abi7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 18,004,874 18,006,730 GRMZM2G082227 abi8 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 4,541,352 4,542,978 Zm00001d027409 abi8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 4,661,492 4,662,475 GRMZM2G522066 abi9 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 165,099,882 165,101,147 GRMZM5G832362 abil1 Forestan et al, 2016 Chr3 226,961,580 226,962,818 GRMZM2G132116 abk1 Zheng et al., 2016 Chr3 6,793,085 6,797,402 GRMZM2G116204 abp1 Classical Gene Chr3 133,916,691 133,921,441 Zm00001d041711 abp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 134,550,012 134,554,530 GRMZM2G064371 abp4 Classical Gene Chr10 26,670,823 26,673,897 Zm00001d023904 abp4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 27,313,349 27,316,275 GRMZM2G035688 abph1 Classical Gene Chr2 28,104,302 28,109,281 GRMZM2G035688 abph1 Chr2 28,104,302 28,109,281 Zm00001d002982 abph1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 28,866,474 28,867,724 AC210173.4_FG005 AC210173.4_FG005 Chr1 224,102,016 224,105,678 Zm00001d032467 AC210173.4_FG005 Chr1 227,648,295 227,649,464 GRMZM2G079908 acb1 Chr10 76,415,905 76,418,574 Zm00001d024518 acb1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 75,760,691 75,762,808 AC197672.3_FG002 acc1 chr10 gene homologous to U58598 Chr10 98,149,608 98,168,566 Zm00001d024998 acc1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 98,541,954 98,563,436 GRMZM5G858094 acc2 chr 2 gene with homology to AF359519 Chr2 83,024,018 83,036,516 Zm00001d004125 acc2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 84,495,887 84,510,274 GRMZM2G164883 acco1 Yamauchi et al., 2016 Chr6 104,114,291 104,115,533 GRMZM2G166639 acco15 Yamauchi et al., 2016 Chr10 90,488,171 90,489,769 GRMZM2G007249 acco2 Yamauchi et al., 2016 Chr7 124,313,854 124,315,851 Zm00001d020686 acco2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 128,315,057 128,316,692 GRMZM2G126732 acco20 Chr4 177,657,802 177,660,210 Zm00001d052136 acco20 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 180,604,677 180,607,029 GRMZM2G166616 acco3 Yamauchi et al., 2016 Chr10 90,480,467 90,481,799 GRMZM2G072529 acco31 Yamauchi et al., 2016 Chr10 90,301,775 90,303,069 GRMZM2G052422 acco35 from BT033380 Chr5 210,825,846 210,828,416 Zm00001d018211 acco35 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 216,633,702 216,636,170 GRMZM2G332423 acco4 Yamauchi et al., 2016 Chr10 90,448,978 90,450,072 GRMZM6G953609 ache1 not located to chr in v3 = Zm00001d021961 in v4 scaffold_107 9 854 GRMZM2G020801 aco1 Chr4 28,147,612 28,154,163 Zm00001d049409 aco1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 29,640,856 29,648,406 GRMZM5G858454 aco2 Chr10 96,344,573 96,353,240 Zm00001d024952 aco2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 96,586,361 96,592,679 GRMZM2G009808 aco3 from: AF457945 Chr9 152,030,140 152,038,415 Zm00001d048358 aco3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 154,915,042 154,923,673 GRMZM2G171707 aco5 from: CO520918 Chr2 203,572,465 203,578,306 AC211394.4_FG004 acp1 Chr9 95,254,430 95,260,811 Zm00001d046593 acp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 97,674,582 97,680,959 GRMZM2G175818 acpt1 Chr1 206,784,775 206,787,442 Zm00001d032019 acpt1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 209,574,119 209,576,739 GRMZM2G163015 acs1 Yamauchi et al., 2016 Chr3 6,433,703 6,435,769 GRMZM2G164405 acs2 from: AY359585 Chr2 15,900,748 15,904,400 Zm00001d002592 acs2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 16,311,191 16,314,804 GRMZM2G018006 acs3 Yamauchi et al., 2016 Chr9 23,963,178 23,966,958 GRMZM2G054361 acs6 Chr1 271,834,818 271,837,308 Zm00001d033862 acs6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 276,519,506 276,521,984 GRMZM5G894619 acs7 Chr10 136,107,954 136,110,772 Zm00001d026060 acs7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 137,296,427 137,304,511 GRMZM2G126010 act1 Classical Gene Chr8 99,906,105 99,909,909 Zm00001d010159 act1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 102,413,407 102,417,640 Zm00001d012277 act2 v4 Chr8 171,775,071 171,778,423 Zm00001d010862 add1 Chr8 130,828,250 130,838,826 GRMZM2G117603 adf1 Classical Gene Chr7 148,916,447 148,917,753 Zm00001d021497 adf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 154,119,353 154,120,546 GRMZM2G097122 adf2 Chr2 200,140,261 200,141,322 Zm00001d006372 adf2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 205,994,533 205,995,809 GRMZM2G060702 adf3 from: EU952653 Chr1 293,239,343 293,243,048 Zm00001d034644 adf3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 298,705,539 298,708,107 GRMZM2G077942 adf5 Chr1 32,872,877 32,876,200 Zm00001d028392 adf5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 33,147,676 33,150,346 GRMZM2G442658 adh1 Classical Gene Chr1 274,050,254 274,054,148 Zm00001d033931 adh1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 278,821,298 278,825,118 GRMZM2G098346 adh2 Classical Gene Chr4 13,409,584 13,412,986 Zm00001d049059 adh2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 14,333,136 14,336,565 GRMZM2G178192 adk1 Chr6 2,450,158 2,455,264 Zm00001d035034 adk1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 2,462,763 2,465,579 GRMZM2G119852 adss1 Chr1 15,773,077 15,777,890 Zm00001d027871 adss1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 16,007,197 16,010,258 GRMZM2G437912 adt6 Olukolu, BA et al. 2016 Chr2 59,667,646 59,669,581 Zm00001d003830 adt6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 61,203,599 61,204,879 Zm00001d053301 adxr1 v4; from: EU973445 Chr4 225,026,663 225,038,512 GRMZM2G032628 ae1 Classical Gene Chr5 168,492,139 168,509,225 GRMZM2G032628 ae1 Chr5 168,492,139 168,509,225 Zm00001d016684 ae1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 172,412,995 172,430,415 GRMZM2G059037 afd1 Classical Gene Chr6 166,795,461 166,827,341 GRMZM2G059037 afd1 from B73_v2 alignment to cDNA AY788900 | 60202504 (July 2011) Chr6 166,795,461 166,827,341 Zm00001d039133 afd1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 170,759,206 170,773,388 GRMZM2G095126 agal1 Chr1 228,378,444 228,381,659 Zm00001d032608 agal1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 231,931,416 231,934,263 GRMZM2G162525 ago1 from: BT036371 Chr8 134,439,555 134,444,960 Zm00001d011096 ago1 Chr8 138,816,382 138,824,360 AC189879.3_FG003 ago101 from: BT069919 Chr9 87,408,375 87,414,276 Zm00001d046438 ago101 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 89,734,202 89,740,800 GRMZM2G141818 ago104 Chr6 168,642,369 168,650,358 Zm00001d039214 ago104 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 172,672,133 172,683,962 GRMZM2G089743 ago105 from: BT037796 Chr3 43,646,012 43,657,336 Zm00001d040429 ago105 Chr3 43,101,748 43,117,241 GRMZM2G461936 ago108 Zhai et al., 2015 Chr5 13,611,800 13,618,698 Zm00001d013542 ago108 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 13,953,891 13,960,814 GRMZM2G079080 ago10b Zhai et al., 2015 Chr6 103,286,236 103,293,200 GRMZM2G105250 ago18a Chr2 199,510,528 199,516,085 Zm00001d006351 ago18a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 205,398,373 205,404,779 GRMZM2G457370 ago18b Char et al., 2016 Chr1 250,132,189 250,137,737 Zm00001d033206 ago18b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 254,172,779 254,178,271 GRMZM2G441583 ago1a Xu et al., 2016 Chr6 43,253,105 43,261,555 Zm00001d035747 ago1a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 44,780,803 44,789,355 AC209206.3_FG011 ago1b Xu et al., 2016 Chr10 137,506,877 137,513,415 Zm00001d026111 ago1b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 138,699,397 138,708,217 GRMZM2G039455 ago1c Xu et al., 2016 Chr2 17,563,301 17,573,156 Zm00001d002650 ago1c Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 18,176,301 18,185,185 GRMZM2G361518 ago1d Xu et al., 2016 Chr5 64,791,077 64,796,881 Zm00001d014875 ago1d Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 66,763,342 66,769,045 GRMZM2G007791 ago2a Zhai et al., 2015 Chr2 9,973,816 9,981,340 GRMZM2G354867 ago2b Zhai et al., 2015 Chr10 141,823,070 141,828,449 GRMZM2G589579 ago4a Zhai et al., 2015 Chr8 2,511,463 2,518,808 GRMZM2G059033 ago5b Zhai et al., 2015 Chr2 233,385,077 233,392,000 GRMZM2G123063 ago5c Zhai et al., 2015 Chr5 4,001,278 4,009,529 GRMZM2G347402 ago6 Zhai et al., 2015 Chr7 72,044,775 72,053,779 GRMZM2G106213 agp1 from Huang et al 2014 Chr2 174,023,583 174,034,507 Zm00001d005546 agp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 178,195,810 178,206,466 GRMZM2G027955 agp2 from W21619 Chr6 166,787,452 166,793,059 Zm00001d039131 agp2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 170,732,907 170,739,381 GRMZM2G391936 agpll1 Huang et al. 2014 Chr1 273,514,151 273,518,985 Zm00001d033910 agpll1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 278,289,784 278,294,463 GRMZM2G144002 agpll2 Huang et al. 2014 Chr7 23,769,242 23,780,203 Zm00001d019266 agpll2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 24,811,760 24,822,600 GRMZM2G163437 agpsl1 from AF334960 Chr1 221,701,404 221,705,997 Zm00001d032385 agpsl1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 224,920,493 224,925,108 GRMZM2G302639 agrr21 Chr8 172,961,620 172,964,067 GRMZM2G015295 ahh1 Classical Gene Chr4 21,158,461 21,161,610 Zm00001d049239 ahh1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 22,371,774 22,374,938 GRMZM2G044569 AI665421 Chr1 268,942,960 268,947,663 GRMZM2G005346 AI714808 Chr2 47,788,105 47,793,199 GRMZM2G443525 AI855190 Chr1 164,103,203 164,108,542 Zm00001d030888 AI855190 Chr1 165,741,227 165,745,488 GRMZM6G177089 AI861369 Annotation questioned Chr2 187,273,065 187,274,870 GRMZM2G129413 aic1 Leiboff et al., 2015 Chr1 119,659,886 119,663,853 Zm00001d030310 aic1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 121,458,401 121,462,310 GRMZM2G045057 aic2 Chr4 204,300,266 204,303,009 Zm00001d053004 aic2 Chr4 208,649,304 208,651,866 GRMZM2G061234 ak1 from: AF178976 Chr7 159,799,011 159,812,272 Zm00001d021877 ak1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 165,265,600 165,277,445 GRMZM2G019838 ak2 Chr4 239,494,965 239,497,297 GRMZM2G104546 akh2 Classical Gene Chr2 173,486,913 173,506,976 Zm00001d005535 akh2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 177,655,850 177,675,449 GRMZM2G047774 akin1 Chr1 299,540,824 299,549,015 Zm00001d034896 akin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 305,008,203 305,016,567 GRMZM2G052812 akr1 Chr6 64,079,621 64,110,792 Zm00001d036024 akr1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 66,752,688 66,763,432 GRMZM2G091054 al9 from: FN400767 Chr8 171,118,734 171,119,464 GRMZM2G057823 ald1 Classical Gene Chr3 165,765,568 165,768,179 GRMZM2G057823 ald1 Chr3 165,765,568 165,768,179 Zm00001d042453 ald1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 168,340,504 168,343,022 GRMZM2G066024 ald2 Chr8 162,856,704 162,859,417 Zm00001d012103 ald2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 168,303,869 168,306,204 GRMZM2G125268 aldh2 from: AF348417 Chr4 165,996,358 165,999,622 Zm00001d051754 aldh2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 168,916,658 168,926,460 GRMZM2G071021 aldh3 from: AF348413 Chr3 221,771,183 221,775,333 Zm00001d044339 aldh3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 225,456,709 225,460,729 GRMZM2G097706 aldh5 Chr3 221,783,373 221,791,498 Zm00001d044340 aldh5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 225,468,766 225,476,879 GRMZM2G148810 alf1 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 124,888,239 124,892,792 Zm00001d037537 alf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 128,609,292 128,613,832 GRMZM2G050495 alf10 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 119,722,635 119,728,067 Zm00001d025504 alf10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 120,752,672 120,758,078 GRMZM2G158918 alf11 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 102,976,534 102,982,864 Zm00001d010241 alf11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 105,685,601 105,692,553 GRMZM5G893976 alf12 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 15,276,414 15,280,931 GRMZM2G080917 alf13 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 170,149,613 170,154,226 GRMZM2G156088 alf14 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 119,489,514 119,496,893 Zm00001d025491 alf14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 120,497,307 120,504,861 AC225147.4_FG003 alf15 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 292,952,249 292,956,375 Zm00001d034627 alf15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 298,407,976 298,412,063 GRMZM2G016564 alf16 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 119,517,572 119,518,319 GRMZM2G110952 alf17 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 2,576,260 2,595,158 Zm00001d012979 alf17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 2,666,357 2,681,120 GRMZM2G008259 alf18 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 11,403,566 11,428,284 Zm00001d049007 alf18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 12,330,907 12,332,675 GRMZM2G047316 alf19 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 158,912,747 158,917,610 Zm00001d005185 alf19 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 162,911,443 162,914,557 GRMZM2G063864 alf2 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 174,455,049 174,458,989 Zm00001d016861 alf2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 178,509,709 178,513,664 GRMZM2G038066 alf3 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 165,038,048 165,044,961 Zm00001d022110 alf3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 170,567,006 170,573,897 GRMZM2G153087 alf4 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 135,934,895 135,940,205 Zm00001d041767 alf4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 136,598,676 136,603,856 GRMZM2G016817 alf5 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 147,835,864 147,843,229 Zm00001d038208 alf5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 151,703,542 151,710,829 GRMZM2G115424 alf6 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 31,315,303 31,320,114 Zm00001d023962 alf6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 32,089,437 32,094,242 GRMZM2G107807 alf7 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 120,648,398 120,651,921 Zm00001d050816 alf7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 124,419,619 124,423,060 GRMZM2G172001 alf8 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 164,293,635 164,297,965 Zm00001d012196 alf8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 169,919,970 169,924,239 GRMZM2G017142 alf9 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 125,066,160 125,069,152 Zm00001d010834 alf9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 129,331,385 129,334,443 GRMZM2G030571 algt1 B73_V2 alignment to EU972920 Chr1 56,676,074 56,678,959 Zm00001d029083 algt1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 57,394,910 57,397,707 GRMZM2G003762 alp1 Chr10 4,676,400 4,679,041 Zm00001d023376 alp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 4,272,268 4,274,843 GRMZM2G143357 als1 Chr4 96,832,612 96,834,891 Zm00001d050567 als1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 101,325,893 101,328,003 GRMZM2G143008 als2 Chr5 164,024,379 164,026,683 Zm00001d016572 als2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 167,860,552 167,862,743 GRMZM2G124963 alt10 from Tausta et al 2014 Chr2 212,180,526 212,185,824 Zm00001d006875 alt10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 218,327,505 218,332,462 GRMZM2G088064 alt4 from alignment of B73_v2 to AF055898 and EU962513 Chr5 37,251,082 37,256,273 GRMZM2G088028 alt5 from alignment of B73_v2 to EU954010 Chr5 37,248,072 37,250,198 GRMZM2G120563 alt7 from alignment of B73_v2 to EU969863 Chr7 1,309,331 1,321,760 Zm00001d018638 alt7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 1,410,785 1,413,063 GRMZM5G840582 alt8 from alignment to of B73_v2 to Duff et al sequence listed as gi|21213577 Chr2 236,204,010 236,208,701 Zm00001d007937 alt8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 243,428,038 243,433,183 GRMZM2G053999 alt9 from Tausta et al 2014 Chr7 165,787,766 165,790,666 GRMZM5G883855 am1 Classical Gene Chr5 16,109,038 16,115,968 Zm00001d013659 am1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 16,553,269 16,560,294 GRMZM2G060400 ami1 one of 2 gene models that match protein accession ACR34426 on B73 reference genome_v2 (MLS June 2012) Chr2 183,985,910 183,988,519 Zm00001d005792 ami1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 188,842,874 188,845,587 GRMZM2G137676 ami2 one of 2 gene models that align to protein accession ACR34426 (MLS June 2012) Chr7 120,006,864 120,009,317 Zm00001d020586 ami2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 123,729,032 123,731,282 GRMZM2G359298 amo1 Chr10 103,645,937 103,651,506 Zm00001d025103 amo1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 104,219,161 104,224,390 GRMZM2G175140 amt1 Gu et al., 2013 Chr10 130,101,668 130,103,747 Zm00001d025831 amt1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 131,243,971 131,245,467 GRMZM2G028736 amt2 Gu et al., 2013 Chr5 185,705,977 185,707,950 Zm00001d017249 amt2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 190,317,987 190,319,453 GRMZM2G118950 amt3 Gu et al., 2013 Chr2 28,938,473 28,940,284 Zm00001d003025 amt3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 29,747,763 29,749,475 GRMZM2G138468 amya3 Classical Gene Chr2 186,911,744 186,913,606 Zm00001d005890 amya3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 191,852,046 191,853,897 GRMZM2G450125 amyb2 from: EU957499 Chr1 9,051,958 9,054,939 Zm00001d027619 amyb2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 9,119,707 9,122,688 GRMZM2G175218 amyb4 from: Entrez Gene 100192000 Chr3 1,535,920 1,540,195 Zm00001d039265 amyb4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 822,132 826,368 GRMZM2G058310 amyb5 Classical Gene Chr7 155,396,510 155,399,710 Zm00001d021702 amyb5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 160,752,742 160,758,067 GRMZM2G081554 an1 based on genomic DNA sequence of cloned gene Chr1 241,277,428 241,285,679 Zm00001d032961 an1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 244,858,795 244,867,417 GRMZM2G039942 ane1 Classical Gene Chr4 222,614,892 222,615,724 Zm00001d053331 ane1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 226,420,587 226,421,326 GRMZM2G372553 ane3 Classical Gene Chr10 80,752,876 80,753,536 Zm00001d024607 ane3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 80,160,170 80,160,624 GRMZM2G325131 ans1 from EU965109 Chr2 41,652,488 41,657,690 Zm00001d003395 ans1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 42,789,053 42,794,069 GRMZM2G171383 ans2 from DV174707 Chr10 123,312,541 123,317,141 Zm00001d036484 ans2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 90,182,314 90,188,051 GRMZM5G837108 ant1 From: EU952880 Chr5 203,603,047 203,604,860 Zm00001d017857 ant1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 208,984,585 208,987,631 GRMZM2G135186 ant2 Classical Gene Chr4 163,798,958 163,802,105 Zm00001d051685 ant2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 166,706,837 166,709,814 GRMZM2G064993 anx1 Chr6 112,316,067 112,319,639 Zm00001d037211 anx1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 115,981,077 115,984,636 GRMZM2G061950 anx2 Chr5 208,242,490 208,245,487 Zm00001d018090 anx2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 214,042,874 214,045,954 GRMZM2G141535 ao1 aligns to mRNA sequence accession D88451 (MLS May 2012) Chr1 286,519,501 286,527,285 Zm00001d034387 ao1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 291,605,273 291,613,251 GRMZM5G899851 ao2 Owens et al., 2014 Chr5 4,589,117 4,593,360 GRMZM2G019799 ao3 includes SNP pzb01403.4, associated with locus (Setter et al 2013; MLS 2013) Chr1 286,429,198 286,437,131 Zm00001d034385 ao3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 291,510,737 291,518,900 GRMZM2G141473 ao4 Owens et al., 2014 Chr1 286,577,038 286,584,000 Zm00001d034388 ao4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 291,662,839 291,670,088 GRMZM2G406830 ao5 Owens et al., 2014 Chr7 7,451,202 7,456,538 GRMZM2G077316 aoc1 from alignment of AY103942 to B73_v2 Chr1 76,740,125 76,741,716 Zm00001d029594 aoc1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 78,239,819 78,241,044 GRMZM2G067225 aos1 Christensen et al.2015 Chr9 145,603,968 145,606,347 Zm00001d048021 aos1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 148,185,906 148,187,354 GRMZM2G002178 aos2 from alignment of DQ658738 to B73_v2 chr1 hit Chr1 28,926,395 28,928,612 Zm00001d028282 aos2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 29,125,756 29,127,204 GRMZM2G376661 aos3 Christensen et al., 2015 Chr1 280,918,468 280,920,450 Zm00001d034186 aos3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 285,956,186 285,957,745 GRMZM2G072653 aos4 Christensen et al., 2015 Chr1 280,908,391 280,910,737 Zm00001d034184 aos4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 285,946,538 285,948,088 AC233960.1_FG002 aox1 aligns to sequence accession AY059646 Chr5 200,032,552 200,035,241 Zm00001d017727 aox1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 205,304,084 205,306,760 GRMZM2G125669 aox2 aligns to sequence accession AY059647 Chr2 12,345,073 12,348,033 Zm00001d002436 aox2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 12,637,877 12,640,584 GRMZM2G074743 aox3 aligns to sequence accession AY059648 Chr2 12,274,611 12,276,371 Zm00001d002434 aox3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 12,564,577 12,567,196 AC195874.2_FG002 ap17 from: EU959074 Chr2 220,221,529 220,227,569 Zm00001d007270 ap17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 226,300,833 226,306,935 GRMZM2G082998 apg1 Belcher et al., 2015 Chr1 174,010,202 174,012,244 Zm00001d031071 apg1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 175,969,709 175,971,563 GRMZM2G007453 apo1 from Watkins et al 2011 Chr2 9,988,448 9,994,999 Zm00001d002317 apo1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 10,169,661 10,178,662 AC189750.4_FG004 aprl1 from: AY739296 Chr7 152,388,543 152,391,232 Zm00001d021596 aprl1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 157,694,972 157,698,287 GRMZM2G087254 aprl2 from: AY739297 Chr2 203,181,028 203,184,356 Zm00001d006467 aprl2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 209,132,700 209,135,945 GRMZM2G042582 aprl3 from: AY739298 Chr4 180,575,468 180,577,838 Zm00001d052215 aprl3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 183,479,773 183,481,948 GRMZM2G159535 aprl4 from: AY739299 Chr5 208,428,136 208,430,824 Zm00001d018099 aprl4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 214,157,648 214,160,124 GRMZM2G085249 aprl5 Chr1 218,147,403 218,155,498 Zm00001d032303 aprl5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 221,288,907 221,296,871 GRMZM2G141848 aprl6 from: Entrez Gene 606422 Chr10 24,452,184 24,457,178 Zm00001d023853 aprl6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 25,081,643 25,084,377 GRMZM2G155073 aprl7 from: AY739302 Chr3 132,867,816 132,870,557 Zm00001d041690 aprl7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 133,491,020 133,493,729 GRMZM2G046231 aprl8 from: AY739303 & Entrez Gene 606423 Chr1 290,214,394 290,215,834 Zm00001d034525 aprl8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 295,633,173 295,636,319 GRMZM2G025248 aprl9 from: AY739304 Chr5 3,553,168 3,555,891 Zm00001d013043 aprl9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 3,626,153 3,629,045 GRMZM2G170101 aprt1 Chr2 31,501,795 31,510,516 Zm00001d003108 aprt1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 32,464,010 32,470,101 GRMZM2G149952 aps1 from: EU973074 Chr1 275,157,705 275,161,519 Zm00001d033981 aps1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 279,982,395 279,986,186 GRMZM2G448687 apt1 Classical Gene Chr9 129,022,644 129,046,413 Zm00001d047468 apt1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 131,003,201 131,026,782 GRMZM2G054300 apx1 from B73_v2 alignment to EU966070 Chr9 138,678,093 138,682,438 Zm00001d047757 apx1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 141,020,616 141,024,529 GRMZM2G140667 apx2 from: Z34934 Chr2 219,258,176 219,261,097 Zm00001d007234 apx2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 225,336,968 225,339,744 GRMZM2G137839 apx3 from B73_v2 alignment to EU973991 Chr1 43,682,818 43,686,019 Zm00001d028709 apx3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 43,901,180 43,904,278 GRMZM2G316256 apx4 Xu et al., 2017 Chr7 15,085,776 15,086,381 GRMZM2G061900 ara3 Chr1 293,212,122 293,215,703 GRMZM2G395844 arf1 Chr5 3,055,229 3,058,761 Zm00001d013007 arf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 3,149,161 3,151,741 GRMZM2G169820 arftf1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 190,580,078 190,595,543 Zm00001d031522 arftf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 192,746,884 192,762,316 GRMZM2G338259 arftf10 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 156,523,681 156,529,660 Zm00001d042267 arftf10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 158,098,798 158,103,660 GRMZM2G056120 arftf11 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 196,638,145 196,644,110 Zm00001d043431 arftf11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 199,611,426 199,617,608 GRMZM2G437460 arftf12 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 210,346,707 210,354,569 Zm00001d043922 arftf12 Chr3 213,879,427 213,887,358 GRMZM2G378580 arftf13 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 23,548,742 23,554,591 Zm00001d049295 arftf13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 24,981,833 24,987,633 GRMZM2G137413 arftf14 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 118,717,709 118,723,692 Zm00001d050781 arftf14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 122,461,155 122,466,889 GRMZM2G081406 arftf15 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 143,829,841 143,832,631 Zm00001d051172 arftf15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 147,112,461 147,115,250 GRMZM2G028980 arftf16 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 237,016,081 237,022,029 Zm00001d053819 arftf16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 241,710,056 241,716,042 GRMZM2G159399 arftf17 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 27,964,682 27,969,438 Zm00001d014013 arftf17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 28,634,910 28,639,671 GRMZM2G035405 arftf18 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 42,328,068 42,332,365 Zm00001d014377 arftf18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 43,566,076 43,572,737 AC207656.3_FG002 arftf19 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 49,282,509 49,284,911 Zm00001d014507 arftf19 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 50,795,874 50,799,332 GRMZM2G153233 arftf2 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 230,778,452 230,782,861 Zm00001d032683 arftf2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 234,266,863 234,271,357 GRMZM2G102845 arftf20 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 78,415,886 78,423,936 GRMZM2G390641 arftf21 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 89,284,779 89,287,980 Zm00001d000358 arftf21 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73V4_ctg115 30,305 33,567 GRMZM2G089640 arftf22 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 91,485,004 91,487,958 Zm00001d036593 arftf22 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 93,920,665 93,928,357 GRMZM2G441325 arftf23 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 158,843,020 158,849,314 Zm00001d038698 arftf23 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 162,803,581 162,809,813 GRMZM2G030710 arftf24 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 164,719,893 164,725,158 Zm00001d039006 arftf24 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 168,658,572 168,663,801 GRMZM2G116557 arftf25 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 159,641,546 159,646,951 Zm00001d011953 arftf25 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 164,990,904 164,996,249 GRMZM5G874163 arftf26 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 173,768,820 173,775,129 Zm00001d012731 arftf26 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 179,454,361 179,460,511 GRMZM2G160005 arftf27 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 11,128,329 11,140,405 Zm00001d045026 arftf27 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 10,505,361 10,517,524 GRMZM2G006042 arftf28 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 13,788,443 13,794,457 Zm00001d023659 arftf28 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 13,876,466 13,882,683 GRMZM2G086949 arftf29 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 146,553,165 146,558,259 Zm00001d026540 arftf29 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 147,919,136 147,925,555 GRMZM2G078274 arftf3 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 2,271,404 2,279,360 Zm00001d001879 arftf3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 2,248,003 2,256,074 GRMZM2G475882 arftf30 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 147,154,383 147,163,265 Zm00001d026590 arftf30 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 148,523,746 148,532,791 GRMZM2G023813 arftf31 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 148,635,880 148,637,733 Zm00001d026687 arftf31 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 149,949,300 149,951,152 GRMZM2G181254 arftf32 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 159,192,608 159,194,386 Zm00001d030803 arftf32 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 160,596,383 160,597,405 GRMZM2G179121 arftf33 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 158,940,439 158,942,519 Zm00001d030801 arftf33 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 160,336,523 160,338,525 GRMZM2G081158 arftf34 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 173,434,033 173,442,028 Zm00001d031064 arftf34 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 175,371,170 175,379,288 GRMZM2G317900 arftf35 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 57,456,264 57,463,575 Zm00001d014690 arftf35 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 59,249,984 59,258,522 GRMZM2G702026 arftf36 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 173,850,054 173,855,670 Zm00001d016838 arftf36 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 177,880,117 177,886,035 GRMZM2G075715 arftf37 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 39,745,937 39,752,588 GRMZM2G005284 arftf38 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 130,985,138 130,987,563 Zm00001d025871 arftf38 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 132,193,858 132,195,808 GRMZM2G034840 arftf4 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 3,342,917 3,349,175 Zm00001d001945 arftf4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 3,367,272 3,374,233 GRMZM5G808366 arftf5 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 26,048,274 26,053,073 Zm00001d002929 arftf5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 26,786,830 26,791,581 GRMZM2G122614 arftf6 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 28,604,618 28,606,017 Zm00001d003011 arftf6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 29,384,400 29,385,005 GRMZM2G475263 arftf7 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 1,552,179 1,556,524 Zm00001d039267 arftf7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 838,392 842,742 GRMZM2G352159 arftf8 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 107,585,492 107,591,866 Zm00001d041056 arftf8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 93,516,867 93,523,481 GRMZM2G073750 arftf9 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 123,881,899 123,888,098 GRMZM2G365731 arid1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 236,206,412 236,245,981 Zm00001d032832 arid1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 239,629,217 239,639,245 GRMZM5G883993 arid10 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 100,869,848 100,876,008 Zm00001d046719 arid10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 103,323,268 103,329,526 GRMZM2G140156 arid2 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 184,041,779 184,053,401 Zm00001d005794 arid2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 188,896,263 188,907,951 GRMZM2G110109 arid3 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 162,151,216 162,155,711 Zm00001d051632 arid3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 165,121,574 165,126,113 GRMZM2G138976 arid4 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 120,237,787 120,284,629 Zm00001d020593 arid4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 123,984,904 123,993,063 GRMZM2G421899 arid5 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 202,662,495 202,668,619 Zm00001d017831 arid5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 208,057,546 208,063,084 GRMZM2G024976 arid6 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 159,240,339 159,247,522 Zm00001d016456 arid6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 162,962,741 162,970,452 GRMZM2G466292 arid7 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 65,453,074 65,462,393 GRMZM2G180654 arid8 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 98,248,764 98,255,015 Zm00001d036790 arid8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 100,942,359 100,948,393 GRMZM5G866423 arid9 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 209,583,050 209,585,556 GRMZM2G015384 arp4 Nelissen et al., 2015 Chr1 2,874,117 2,894,252 Zm00001d027326 arp4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 2,977,014 2,997,162 GRMZM2G015861 arp7 Chr5 31,838,656 31,847,972 Zm00001d014112 arp7 Chr5 32,942,679 32,952,221 GRMZM2G066460 arpp0 from: Y07959 Chr6 9,206,517 9,209,074 Zm00001d035201 arpp0 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 9,611,943 9,614,439 GRMZM2G032315 arpp1a Classical Gene Chr6 4,596,812 4,609,378 Zm00001d035087 arpp1a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 4,639,411 4,640,898 GRMZM2G119809 arpp2a Classical Gene Chr8 72,904,843 72,907,132 Zm00001d009653 arpp2a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 74,612,588 74,614,857 GRMZM2G102891 arpp2a-2 from: U62748 Chr8 72,750,165 72,752,947 Zm00001d009652 arpp2a-2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 74,457,985 74,460,428 GRMZM2G010257 arpp2a-3 from: U62749 Chr2 2,550,585 2,552,593 Zm00001d001899 arpp2a-3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 2,559,817 2,561,845 GRMZM2G114954 arpp2b from: U62753 Chr8 98,106,249 98,110,627 Zm00001d010128 arpp2b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 100,554,189 100,558,541 GRMZM2G077208 arpp3 from: U62751 Chr5 56,870,925 56,872,383 Zm00001d014679 arpp3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 58,659,914 58,661,357 GRMZM2G126821 arpp40 Chr9 151,935,786 151,938,224 Zm00001d048346 arpp40 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 154,820,912 154,823,371 GRMZM2G126834 arr1 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 146,136,871 146,143,251 Zm00001d048046 arr1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 148,718,695 148,724,289 GRMZM2G409974 arr2 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 13,465,293 13,469,635 Zm00001d045112 arr2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 13,117,991 13,122,682 GRMZM2G360523 arr4 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 101,990,935 101,999,695 Zm00001d046755 arr4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 104,439,437 104,448,739 GRMZM2G133262 arr5 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 58,834,080 58,845,813 Zm00001d014723 arr5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 60,590,272 60,603,467 GRMZM2G177220 arr6 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 165,939,858 165,943,821 Zm00001d042463 arr6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 168,517,515 168,521,580 GRMZM2G100318 arr7 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 163,129,203 163,133,084 Zm00001d012128 arr7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 168,571,952 168,576,042 GRMZM2G479110 arr8 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 213,780,789 213,785,593 Zm00001d018380 arr8 Chr5 219,584,158 219,587,472 GRMZM2G140633 asc1 from B73_V2 alignment to AW076338 Chr7 127,925,177 127,927,750 Zm00001d020772 asc1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 131,855,551 131,857,649 GRMZM2G423472 asg11 Chr1 180,718,980 180,720,314 GRMZM2G423476 asg11 Chr1 180,715,229 180,718,717 Zm00001d031223 asg11 Chr1 182,657,007 182,661,933 GRMZM2G048375 asg12a Chr9 148,237,745 148,240,963 GRMZM2G418289 asg3 Chr1 82,397,413 82,401,819 Zm00001d029721 asg3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 84,037,187 84,040,069 GRMZM5G885628 asg30b Chr1 61,021,664 61,024,477 Zm00001d029196 asg30b Chr1 61,783,914 61,789,718 GRMZM2G054267 asg34a(msd) Chr7 13,967,993 13,969,287 GRMZM2G158342 asg48a Chr3 13,109,108 13,110,869 GRMZM2G003869 asg49 Chr7 128,171,458 128,175,453 GRMZM2G134205 asg58 Chr1 185,502,621 185,506,038 Zm00001d031372 asg58 Chr1 187,621,387 187,624,780 GRMZM2G122863 asg73 Chr5 9,339,454 9,342,646 GRMZM5G882821 asg75 Chr1 59,507,378 59,510,682 GRMZM2G052935 ask2 Chr2 157,355,447 157,361,044 GRMZM2G074589 asn1 Chr9 32,468,024 32,477,360 Zm00001d045675 asn1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 32,681,291 32,690,688 GRMZM2G093175 asn2 Chr3 229,507,263 229,511,632 Zm00001d044608 asn2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 233,328,410 233,331,483 GRMZM2G053669 asn3 Chr1 45,118,780 45,122,813 Zm00001d028750 asn3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 45,286,331 45,290,076 GRMZM2G078472 asn4 Chr9 138,041,002 138,044,999 Zm00001d047736 asn4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 140,319,258 140,322,843 GRMZM2G395114 ast91 Purduns et al., 2015 Chr2 4,895,674 4,900,685 Zm00001d002038 ast91 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 4,861,458 4,865,979 GRMZM2G066059 atg10 Chr10 127,832,805 127,834,732 Zm00001d025765 atg10 Chr10 128,934,892 128,936,806 GRMZM2G160174 atg101 Chr4 134,649,000 134,653,272 Zm00001d051033 atg101 Chr4 137,842,313 137,846,513 GRMZM2G143445 atg11a Chr4 235,491,209 235,496,287 Zm00001d053741 atg11a Chr4 240,158,918 240,164,128 GRMZM2G119571 atg11b Chr5 91,301,942 91,306,920 Zm00001d015493 atg11b Chr5 93,597,362 93,602,535 GRMZM5G842517 atg12 Li et al., 2015 Chr5 211,765,878 211,769,316 Zm00001d018259 atg12 Chr5 217,540,268 217,543,540 GRMZM2G129675 atg13a Chr4 149,303,644 149,309,556 Zm00001d051307 atg13a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 152,668,573 152,674,431 GRMZM2G109348 atg13b Chr5 189,930,896 189,935,903 Zm00001d017403 atg13b Chr5 194,992,409 194,999,989 GRMZM5G825909 atg13c Chr2 22,894,288 22,899,981 Zm00001d002819 atg13c Chr2 23,558,116 23,563,958 GRMZM2G000973 atg13d Chr10 133,332,732 133,338,321 Zm00001d025950 atg13d Chr10 134,553,869 134,559,580 GRMZM2G044733 atg13e Chr4 214,493,953 214,497,097 Zm00001d053173 atg13e Chr4 218,017,452 218,021,002 GRMZM2G125352 atg13f Chr2 140,942,228 140,947,086 Zm00001d004856 atg13f Chr2 145,083,433 145,087,343 GRMZM2G078252 atg16L Chr1 275,755,025 275,757,919 Zm00001d033994 atg16L Chr1 280,605,377 280,608,220 GRMZM2G122607 atg18a Chr8 159,245,954 159,250,705 Zm00001d011920 atg18a Chr8 164,595,644 164,600,231 GRMZM2G146280 atg18b Chr3 155,017,904 155,022,611 Zm00001d042215 atg18b Chr3 156,417,053 156,421,558 GRMZM2G069177 atg18c Chr3 13,319,540 13,323,979 Zm00001d039703 atg18c Chr3 12,596,468 12,600,760 GRMZM2G143211 atg18d Chr8 16,744,023 16,748,694 Zm00001d008691 atg18d Chr8 17,288,750 17,293,014 GRMZM2G018573 atg18e Chr5 213,304,323 213,308,887 Zm00001d018355 atg18e Chr5 219,132,562 219,138,725 GRMZM2G116700 atg18f Chr3 189,955,263 189,961,162 Zm00001d043239 atg18f Chr3 192,795,025 192,801,090 GRMZM2G546452 atg18g Chr6 145,841,966 145,847,437 GRMZM5G815032 atg18g Chr6 145,841,032 145,841,908 Zm00001d038156 atg18g Chr6 149,721,375 149,731,447 GRMZM2G078468 atg18h Chr8 106,464,907 106,525,082 Zm00001d010315 atg18h Chr8 109,278,193 109,288,346 GRMZM2G301031 atg18i Chr1 236,282,952 236,289,928 GRMZM2G103793 atg18j Chr8 119,334,838 119,335,859 Zm00001d010645 atg18j Chr8 122,851,051 122,852,068 GRMZM2G105415 atg1a Chr1 4,709,171 4,714,557 Zm00001d027415 atg1a Chr1 4,832,874 4,838,381 GRMZM2G160428 atg1b Chr1 39,064,381 39,071,002 Zm00001d028570 atg1b Chr1 39,410,431 39,417,092 GRMZM2G164160 atg1c Chr9 140,368,230 140,376,655 Zm00001d047833 atg1c Chr9 142,784,493 142,792,921 GRMZM2G104658 atg1t Chr10 148,410,228 148,419,253 Zm00001d026677 atg1t Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 149,751,381 149,758,192 GRMZM2G042889 atg2 Chr6 117,200,568 117,211,409 GRMZM2G426483 atg2 Chr6 117,195,254 117,197,344 Zm00001d037321 atg2 Chr6 120,999,149 121,016,423 GRMZM5G818887 atg3 Chr9 115,692,361 115,698,056 Zm00001d000178 atg3 B73V4_ctg181 132,473 138,116 GRMZM2G064212 atg4a Chr2 1,038,241 1,042,272 Zm00001d001790 atg4a Chr2 1,019,499 1,023,493 GRMZM2G173682 atg4b Chr10 147,965,797 147,969,285 Zm00001d026641 atg4b Chr10 149,273,828 149,277,821 GRMZM2G098420 atg5 Chr5 70,074,271 70,077,861 Zm00001d015009 atg5 Chr5 72,040,325 72,044,623 GRMZM2G092112 atg6a Chr3 158,481,307 158,487,300 Zm00001d042303 atg6a Chr3 160,015,501 160,021,474 GRMZM2G027857 atg6b Chr8 160,472,107 160,477,829 Zm00001d011984 atg6b Chr8 165,880,817 165,889,059 GRMZM2G005304 atg7 Chr8 142,688,645 142,697,014 Zm00001d011347 atg7 Chr8 147,387,271 147,396,132 GRMZM2G336871 atg8a Li et al., 2015 Chr2 203,402,562 203,407,632 Zm00001d006474 atg8a Chr2 209,341,868 209,344,124 GRMZM2G419694 atg8b Chr10 142,392,553 142,395,739 Zm00001d026335 atg8b Chr10 143,747,463 143,750,718 GRMZM2G076826 atg8c Chr2 8,901,390 8,904,605 Zm00001d002257 atg8c Chr2 9,067,800 9,076,270 GRMZM2G134613 atg8d Chr10 59,882,332 59,885,876 Zm00001d024239 atg8d Chr10 59,002,720 59,005,171 GRMZM2G014975 atg8e Chr4 28,055,574 28,056,779 Zm00001d049405 atg8e Chr4 29,550,441 29,552,705 GRMZM2G035461 atg9 Chr1 33,887,967 33,895,308 Zm00001d028417 atg9 Chr1 34,216,191 34,223,589 GRMZM2G127949 atl1 Chr3 178,053,577 178,060,075 Zm00001d042809 atl1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 180,800,042 180,806,507 GRMZM2G101020 atp1 Classical Gene Chr3 141,387,560 141,390,705 GRMZM2G101020 atp1 from B73_v2 alignment to EU962507 Chr3 141,387,560 141,390,705 Zm00001d041882 atp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 142,230,896 142,233,815 GRMZM2G113408 atp2 from: entrez gene 542267 Chr6 163,133,778 163,137,313 Zm00001d038929 atp2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 167,164,721 167,168,568 GRMZM2G171628 atp3 from: BT062053 Chr2 202,325,435 202,328,872 Zm00001d006439 atp3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 208,238,550 208,242,017 GRMZM2G128665 atp4 Zoschke et al., 2012 Chr1 26,825,757 26,828,101 Zm00001d028221 atp4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 27,049,419 27,051,494 GRMZM5G862663 atpc1 from: X66005 Chr5 208,034,934 208,036,864 Zm00001d018069 atpc1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 213,760,677 213,761,423 GRMZM2G048907 atpc2 Belcher et al., 2015 Chr7 152,868,671 152,870,546 Zm00001d021620 atpc2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 158,179,238 158,180,317 GRMZM2G372928 atx3 Chr8 25,359,643 25,396,088 GRMZM2G085176 atx4 part of Zm00001d039355 in v4 Chr3 3,209,218 3,210,859 GRMZM2G085266 atx4 Chen et al, 2017 Chr3 3,200,792 3,209,093 Zm00001d039355 atx4 v4 Chr3 2,451,357 2,465,548 GRMZM2G170412 atx5 Chen et al, 2017 Chr8 147,255,919 147,262,824 GRMZM2G179814 atx5 part of Zm00001d011490 in v4 Chr8 147,263,113 147,264,543 GRMZM6G025093 atx5 part of Zm00001d011490 in v4 Chr8 147,255,919 147,262,824 Zm00001d011490 atx5 v4 Chr8 152,111,717 152,120,844 GRMZM2G106218 AW036917 Chr6 149,672,083 149,678,650 GRMZM2G140590 AW231791 Chr8 114,541,249 114,555,400 Zm00001d028925 AW400087 Chr1 51,729,487 51,730,402 GRMZM2G014240 AY103622 Chr9 14,328,479 14,333,699 GRMZM2G352129 AY103944 Chr2 31,534,332 31,539,953 GRMZM2G124557 AY104360 Chr1 189,385,226 189,390,834 GRMZM2G063754 AY105479 Chr6 123,931,291 123,934,591 Zm00001d037509 AY105479 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 127,637,988 127,641,192 GRMZM2G303118 AY106040 Chr2 14,837,139 14,848,360 Zm00001d002553 AY106040 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 15,281,181 15,287,925 GRMZM2G069676 AY106170 Chr7 41,746,480 41,810,114 Zm00001d019568 AY106170 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 43,298,735 43,322,873 GRMZM2G153138 AY106313 from: AY106313 Chr3 2,070,509 2,079,118 Zm00001d039304 AY106313 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 1,395,539 1,402,948 Zm00001d028708 AY106736 v4 alignment to AY106736 Chr1 43,891,995 43,892,168 GRMZM2G068117 AY106825 Chr1 293,700,005 293,704,720 Zm00001d034662 AY106825 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 299,188,693 299,193,386 GRMZM2G404973 AY107034 Chr2 22,692,870 22,695,229 Zm00001d002811 AY107034 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 23,362,233 23,364,607 GRMZM2G383404 AY107053 Chr6 120,201,718 120,203,603 Zm00001d037384 AY107053 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 123,931,487 123,933,195 GRMZM2G085718 AY107200 Chr4 229,715,408 229,720,104 Zm00001d053561 AY107200 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 234,194,672 234,201,038 GRMZM2G007466 AY107329 Chr5 183,171,312 183,177,271 Zm00001d017167 AY107329 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 187,781,967 187,787,211 GRMZM2G394212 AY107489 Chr1 50,093,597 50,096,783 Zm00001d028907 AY107489 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 50,514,018 50,524,361 GRMZM2G467169 AY107496 Chr9 12,108,547 12,115,783 Zm00001d045072 AY107496 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 11,555,037 11,562,320 GRMZM2G136453 AY107847 Chr1 195,364,024 195,371,310 GRMZM2G021781 AY108136 Chr1 277,442,411 277,443,354 GRMZM2G459811 AY109128 Chr1 293,870,055 293,875,566 Zm00001d034667 AY109128 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 299,308,121 299,311,210 GRMZM2G023392 AY109506 Chr1 250,361,435 250,364,192 GRMZM2G021605 AY109534 Chr4 181,259,476 181,262,496 Zm00001d052233 AY109534 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 184,160,265 184,163,189 GRMZM2G028039 AY109543 Chr9 149,430,555 149,437,059 Zm00001d048199 AY109543 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 152,292,837 152,294,447 GRMZM2G111309 AY109644 Chr7 148,490,575 148,493,173 GRMZM2G110198 AY109678 Chr1 115,412,522 115,416,244 Zm00001d030256 AY109678 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 117,002,474 117,006,192 GRMZM2G422649 AY109916 Chr1 299,045,202 299,049,209 GRMZM2G004619 AY109917 Chr2 199,378,455 199,380,799 Zm00001d006348 AY109917 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 205,258,531 205,260,875 GRMZM2G012566 AY109929 Chr1 38,552,479 38,555,256 Zm00001d028548 AY109929 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 38,916,237 38,917,464 GRMZM2G019267 AY110019 Chr1 271,027,530 271,032,041 Zm00001d033847 AY110019 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 275,685,215 275,689,769 GRMZM2G141799 AY110052 Chr1 39,217,739 39,224,044 Zm00001d028575 AY110052 Chr1 39,563,411 39,569,231 GRMZM5G888696 AY110159 Chr1 228,622,230 228,626,047 GRMZM2G139041 AY110160 Chr1 295,097,497 295,100,438 Zm00001d034714 AY110160 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 300,523,648 300,526,448 GRMZM2G703928 AY110191 Chr1 227,428,695 227,431,105 Zm00001d032572 AY110191 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 230,960,883 230,963,337 GRMZM2G070011 AY110253 Chr4 15,320,600 15,322,087 Zm00001d049113 AY110253 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 16,448,731 16,450,218 GRMZM2G115981 AY110296 Chr1 184,600,901 184,602,544 Zm00001d031338 AY110296 possible overlap with php20654 Chr1 186,729,080 186,739,316 GRMZM2G031568 AY110297 Chr3 67,694,182 67,699,591 Zm00001d040818 AY110297 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 67,922,595 67,928,066 GRMZM2G382569 AY110330 v3 position distinct from GRMZM2G703582; v4 location is merged Chr1 62,144,320 62,146,281 GRMZM2G703582 AY110330 v3 position distinct from GRMZM2G382569; v4 location is merged Chr1 61,951,365 61,953,102 Zm00001d029218 AY110330 v4 Chr1 62,747,068 62,748,525 GRMZM2G703918 AY110356 Chr1 224,142,943 224,149,783 Zm00001d032470 AY110356 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 227,690,751 227,697,800 GRMZM2G084783 AY110393 Chr1 51,288,714 51,290,044 GRMZM2G110572 AY110396 Chr1 147,990,710 148,002,097 Zm00001d030626 AY110396 Chr1 149,605,257 149,616,644 GRMZM2G006047 AY110426 Chr1 287,181,576 287,182,811 Zm00001d034414 AY110426 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 292,295,756 292,296,877 AC204292.4_FG006 AY110435 Chr6 137,265,858 137,268,134 Zm00001d037890 AY110435 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 141,204,831 141,207,107 GRMZM2G087612 AY110479 Chr1 291,937,388 291,941,593 GRMZM2G462635 AY110542 Chr6 135,110,368 135,111,326 Zm00001d037831 AY110542 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 139,023,844 139,024,401 GRMZM2G374302 AY110562 Chr4 144,862,958 144,868,207 Zm00001d051194 AY110562 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 148,148,821 148,150,740 GRMZM6G274034 AY110566 Chr1 183,801,911 183,803,760 Zm00001d031308 AY110566 Chr1 185,839,155 185,840,307 Zm00001d031309 AY110566 Chr1 185,840,864 185,842,897 GRMZM2G149265 AY110569 Chr8 167,827,882 167,831,438 Zm00001d012395 AY110569 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 173,526,390 173,530,216 GRMZM2G313678 AY110625 Chr5 1,033,436 1,038,047 GRMZM2G032047 AY110632 Chr1 46,129,394 46,130,844 Zm00001d028785 AY110632 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 46,379,532 46,380,892 GRMZM2G065552 AY110640 Chr1 44,344,382 44,345,273 GRMZM2G158261 AY110640 Chr1 44,339,652 44,344,157 Zm00001d028728 AY110640 v4 Chr1 44,521,225 44,532,226 GRMZM2G179308 AY111089 Chr5 180,787,355 180,790,720 Zm00001d017096 AY111089 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 185,267,329 185,270,693 GRMZM2G436319 AY111153 Chr1 194,767,910 194,771,939 Zm00001d031641 AY111153 Chr1 197,111,866 197,115,583 GRMZM2G018793 AY111333 Chr3 93,198,079 93,199,928 Zm00001d041217 AY111333 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 105,966,468 105,968,206 GRMZM2G098331 AY111680 Chr1 104,477,515 104,491,515 Zm00001d030116 AY111680 Chr1 107,042,927 107,056,687 GRMZM2G092823 AY111834 Chr1 207,572,006 207,574,422 Zm00001d032042 AY111834 Chr1 210,344,733 210,347,136 GRMZM2G125239 AY111962 Chr4 221,138,448 221,144,193 Zm00001d053298 AY111962 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 224,897,414 224,899,075 GRMZM2G120440 AY112175 Chr1 294,807,181 294,809,796 Zm00001d034702 AY112175 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 300,265,094 300,268,087 AF546187.1_FG001 az19D1 from: AF371267 Chr1 161,790,710 161,791,432 AF546187.1_FG007 az19D2 from: AF371268 Chr1 162,006,911 162,007,636 Zm00001d030855 az19D2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 163,526,102 163,526,827 GRMZM2G044625 az22z3 from: AF371275 Chr4 5,122,439 5,123,472 Zm00001d048809 az22z3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 5,874,886 5,875,686 GRMZM2G346897 az22z4 from: Entrez Gene 606402 Chr4 5,145,291 5,146,364 Zm00001d048812 az22z4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 5,897,751 5,898,554 GRMZM2G088365 az22z5 from: Entrez Gene 541926 Chr4 5,083,079 5,084,155 Zm00001d048806 az22z5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 5,835,517 5,836,317 GRMZM2G172795 b1 Classical Gene Chr2 19,041,697 19,046,154 GRMZM2G172795 b1 from B73_v2 alignment to GenBank X57276 Chr2 19,041,697 19,046,154 Zm00001d000236 b1 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73V4_ctg44 29,069 33,275 GRMZM2G397518 ba1 Classical Gene Chr3 183,139,911 183,140,880 GRMZM2G397518 ba1 Chr3 183,139,911 183,140,880 Zm00001d042989 ba1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 186,014,629 186,015,264 GRMZM2G072274 baf1 alignment of B73_V2 to sequence JF309450 Chr9 21,976,903 21,978,472 Zm00001d045427 baf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 21,786,350 21,787,375 GRMZM2G145720 bak1 Leiboff et al., 2015 Chr9 35,179,613 35,185,362 Zm00001d045728 bak1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 35,557,580 35,561,282 GRMZM2G008271 bap1a Chr10 80,861,842 80,863,106 GRMZM2G008403 bap1b Chr10 80,878,304 80,878,997 GRMZM2G152655 bap2 Classical Gene Chr4 34,294,927 34,295,919 Zm00001d049576 bap2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 35,888,519 35,889,106 GRMZM2G077673 bas1 Chr7 149,169,258 149,171,046 Zm00001d021506 bas1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 154,416,323 154,419,080 GRMZM2G007928 bbi1 Johnson et al., 2014 Chr3 179,685,800 179,686,954 Zm00001d042867 bbi1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 182,501,764 182,502,401 GRMZM2G179366 bbr1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 192,523,101 192,525,654 Zm00001d031572 bbr1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 194,778,144 194,780,073 GRMZM2G166230 bbr2 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 157,868,458 157,869,994 Zm00001d005160 bbr2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 161,883,752 161,884,455 GRMZM2G164735 bbr3 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 43,266,139 43,268,012 Zm00001d049800 bbr3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 45,047,883 45,048,929 GRMZM2G118690 bbr4 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 23,765,880 23,771,224 Zm00001d045477 bbr4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 23,631,215 23,636,103 GRMZM2G025488 bcd98a Chr1 205,727,961 205,738,069 Zm00001d031981 bcd98a Chr1 208,507,191 208,517,368 GRMZM2G307119 bd1 Classical Gene Chr7 172,248,843 172,250,339 GRMZM2G307119 bd1 from B73_v2 alignment to cDNA AY178191|27802486 (July 2011); assigned by the Grassius project to ereb151, (Yilmaz et al 2009) Chr7 172,248,843 172,250,339 Zm00001d022488 bd1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 178,605,958 178,606,905 GRMZM2G160565 bde1 Classical Gene Chr5 196,601,246 196,608,839 Zm00001d017614 bde1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 201,741,196 201,748,623 GRMZM2G104226 BE639338 Chr3 214,143,658 214,147,325 GRMZM2G301071 BE639426 Chr1 274,775,918 274,780,056 GRMZM2G090432 ben1 Chr5 6,548,812 6,551,287 Zm00001d013230 ben1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 6,781,804 6,783,662 GRMZM2G102514 bes1 assigned by the Grassius project, (Yilmaz et al 2009) and the Cell Genomics Project Chr7 160,551,419 160,553,078 Zm00001d021927 bes1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 165,996,679 165,998,338 GRMZM2G091445 betl10 from: AI665330 Chr3 155,423,558 155,424,150 Zm00001d042231 betl10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 156,958,516 156,959,137 GRMZM2G175976 betl3 Classical Gene Chr3 132,282,587 132,283,333 Zm00001d041671 betl3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 132,868,467 132,868,983 GRMZM2G073290 betl4 from: AJ133531 Chr4 209,022,805 209,023,472 Zm00001d000161 betl4 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73V4_ctg53 334,998 335,553 GRMZM2G087413 betl9 from: LOC100286270 Chr3 138,651,695 138,652,380 Zm00001d041822 betl9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 139,335,175 139,335,830 GRMZM2G051219 bf1 from BT034353 Chr9 153,861,473 153,877,358 Zm00001d048461 bf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 156,752,400 156,768,303 GRMZM2G172204 bgaf1 alignment of cDNA AF232008 to B73_v2 AGP Chr7 26,167,430 26,169,874 Zm00001d019312 bgaf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 27,241,848 27,243,532 GRMZM2G067654 bhlh10 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 12,986,561 12,988,736 Zm00001d045107 bhlh10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 12,899,327 12,901,462 GRMZM2G313756 bhlh100 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 108,376,074 108,377,174 Zm00001d025205 bhlh100 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 109,117,980 109,119,599 GRMZM2G173521 bhlh101 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 73,730,378 73,731,762 GRMZM2G355469 bhlh102 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 118,390,725 118,392,197 Zm00001d025462 bhlh102 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 119,451,223 119,452,565 GRMZM2G301089 bhlh103 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 274,801,584 274,803,327 Zm00001d033957 bhlh103 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 279,603,784 279,609,495 GRMZM2G088443 bhlh104 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 14,937,168 14,939,315 Zm00001d039764 bhlh104 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 14,220,288 14,222,436 GRMZM2G082586 bhlh105 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 128,740,346 128,742,573 Zm00001d020790 bhlh105 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 132,794,517 132,796,578 GRMZM2G089501 bhlh106 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 130,270,033 130,277,723 Zm00001d020834 bhlh106 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 134,251,695 134,259,327 GRMZM2G145146 bhlh107 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 127,620,549 127,621,728 Zm00001d020763 bhlh107 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 131,556,875 131,558,045 GRMZM2G119823 bhlh108 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 105,635,764 105,638,288 Zm00001d025141 bhlh108 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 106,318,787 106,321,238 GRMZM2G013688 bhlh109 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 139,760,958 139,761,887 Zm00001d021164 bhlh109 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 144,534,579 144,535,451 GRMZM2G176289 bhlh11 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 160,021,000 160,023,829 Zm00001d051569 bhlh11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 162,992,089 162,994,208 GRMZM2G452996 bhlh110 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 12,462,798 12,465,171 Zm00001d027753 bhlh110 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 12,658,925 12,661,298 GRMZM2G150327 bhlh111 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 112,414,537 112,416,571 Zm00001d030232 bhlh111 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 114,928,784 114,930,818 GRMZM5G879527 bhlh112 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 188,065,123 188,068,113 Zm00001d031441 bhlh112 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 190,232,595 190,235,627 GRMZM2G471635 bhlh113 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 57,373,825 57,374,550 Zm00001d050016 bhlh113 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 59,679,062 59,679,787 GRMZM2G095899 bhlh114 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 257,635,033 257,637,914 Zm00001d033407 bhlh114 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 262,150,222 262,152,715 GRMZM2G068604 bhlh115 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 178,455,867 178,460,697 Zm00001d031167 bhlh115 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 180,398,895 180,403,600 GRMZM2G042895 bhlh116 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 76,600,002 76,602,213 Zm00001d024522 bhlh116 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 75,943,680 75,945,921 GRMZM2G062541 bhlh117 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 87,704,026 87,706,060 Zm00001d024783 bhlh117 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 87,873,243 87,875,642 GRMZM2G061906 bhlh118 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 151,319,278 151,321,414 Zm00001d038357 bhlh118 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 155,275,133 155,277,368 GRMZM5G863198 bhlh119 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 150,359,143 150,360,185 Zm00001d016257 bhlh119 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 153,889,883 153,891,184 GRMZM2G316758 bhlh12 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 174,031,590 174,034,049 Zm00001d052038 bhlh12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 177,039,742 177,043,438 GRMZM2G109605 bhlh120 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 49,157,774 49,159,839 Zm00001d012642 bhlh120 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 177,705,263 177,706,934 GRMZM2G083504 bhlh121 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 192,028,339 192,031,016 Zm00001d006065 bhlh121 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 197,131,272 197,133,841 AC233960.1_FG005 bhlh122 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 200,017,893 200,019,898 Zm00001d017724 bhlh122 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 205,288,559 205,291,755 GRMZM2G369629 bhlh123 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 124,380,275 124,381,777 Zm00001d037528 bhlh123 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 128,147,394 128,148,828 GRMZM2G132550 bhlh124 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 132,371,821 132,374,168 Zm00001d037749 bhlh124 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 136,322,271 136,324,598 GRMZM2G017349 bhlh125 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 16,492,659 16,496,592 Zm00001d045212 bhlh125 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 16,243,543 16,247,283 GRMZM2G057413 bhlh126 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 148,071,103 148,072,213 Zm00001d042062 bhlh126 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 149,339,655 149,340,629 GRMZM2G128807 bhlh127 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 62,292,037 62,293,983 Zm00001d014814 bhlh127 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 64,070,549 64,072,356 GRMZM2G314882 bhlh128 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 240,582,530 240,585,487 Zm00001d054038 bhlh128 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 245,455,205 245,458,068 GRMZM5G856837 bhlh129 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 69,476,595 69,479,221 Zm00001d014995 bhlh129 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 71,410,131 71,412,758 GRMZM2G091003 bhlh13 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 157,508,570 157,511,308 Zm00001d051509 bhlh13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 160,961,176 160,963,697 GRMZM2G033356 bhlh130 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 23,448,577 23,452,318 Zm00001d049294 bhlh130 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 24,896,748 24,900,567 GRMZM2G171464 bhlh131 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 154,113,331 154,114,780 Zm00001d048478 bhlh131 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 156,990,040 156,991,863 GRMZM2G114873 bhlh132 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 166,491,755 166,495,032 Zm00001d042482 bhlh132 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 169,071,573 169,074,850 GRMZM2G437481 bhlh133 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 126,674,304 126,678,092 GRMZM2G086474 bhlh134 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 135,701,832 135,705,430 Zm00001d026046 bhlh134 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 136,883,275 136,886,894 GRMZM2G134735 bhlh135 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 199,103,560 199,104,328 Zm00001d031781 bhlh135 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 201,578,936 201,579,691 GRMZM2G144275 bhlh136 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 137,522,634 137,525,144 Zm00001d021019 bhlh136 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 140,533,153 140,535,630 GRMZM2G019806 bhlh137 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 271,047,086 271,049,436 Zm00001d033848 bhlh137 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 275,704,805 275,707,378 GRMZM2G176141 bhlh138 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 180,804,696 180,807,605 Zm00001d005740 bhlh138 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 185,575,930 185,578,477 GRMZM2G064638 bhlh139 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 140,971,813 140,976,844 Zm00001d016095 bhlh139 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 144,342,410 144,347,442 GRMZM5G817854 bhlh14 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 159,527,964 159,528,647 GRMZM2G475289 bhlh140 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 4,742,268 4,744,173 Zm00001d027419 bhlh140 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 4,891,941 4,894,990 GRMZM2G080168 bhlh141 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 17,257,180 17,259,695 Zm00001d049158 bhlh141 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 18,372,576 18,374,628 GRMZM2G074438 bhlh142 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 98,786,270 98,791,819 Zm00001d036807 bhlh142 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 101,495,580 101,501,691 GRMZM2G043854 bhlh143 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 141,691,622 141,695,021 Zm00001d047878 bhlh143 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 144,091,969 144,094,662 GRMZM2G042893 bhlh144 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 81,074,165 81,077,414 Zm00001d004095 bhlh144 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 82,544,089 82,547,190 GRMZM2G472671 bhlh145 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 196,839,526 196,840,758 Zm00001d031717 bhlh145 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 199,251,192 199,251,956 GRMZM2G085467 bhlh146 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 132,922,697 132,925,252 Zm00001d020932 bhlh146 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 136,986,209 136,988,745 GRMZM2G383841 bhlh147 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 209,280,712 209,282,012 Zm00001d006733 bhlh147 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 215,451,653 215,453,055 GRMZM2G080054 bhlh148 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 9,449,250 9,451,125 GRMZM2G057260 bhlh15 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 162,119,125 162,124,837 Zm00001d021988 bhlh15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 167,558,259 167,560,016 GRMZM2G045431 bhlh150 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 125,355,436 125,357,466 Zm00001d020705 bhlh150 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 129,461,161 129,461,889 GRMZM2G137541 bhlh151 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 189,054,253 189,057,549 Zm00001d005964 bhlh151 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 194,057,868 194,060,798 GRMZM5G839518 bhlh152 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 174,979,821 174,983,548 Zm00001d016873 bhlh152 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 178,968,180 178,971,530 GRMZM2G036554 bhlh153 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 87,433,402 87,434,930 Zm00001d024781 bhlh153 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 87,545,456 87,546,629 GRMZM2G385543 bhlh154 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 9,129,443 9,131,483 Zm00001d013357 bhlh154 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 9,460,784 9,464,546 GRMZM2G042101 bhlh155 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 181,930,597 181,931,947 Zm00001d052254 bhlh155 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 184,820,400 184,821,661 GRMZM2G317450 bhlh156 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 204,572,094 204,577,083 Zm00001d017908 bhlh156 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 209,974,275 209,978,114 GRMZM2G009478 bhlh157 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 189,179,955 189,185,728 Zm00001d005969 bhlh157 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 194,253,687 194,260,197 GRMZM2G165090 bhlh158 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 168,447,178 168,451,942 Zm00001d030972 bhlh158 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 170,184,543 170,189,193 GRMZM2G004356 bhlh159 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 4,217,936 4,222,849 GRMZM2G006631 bhlh160 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 19,099,172 19,101,186 Zm00001d027987 bhlh160 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 19,433,159 19,435,672 GRMZM2G045883 bhlh161 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 208,944,482 208,949,818 Zm00001d018119 bhlh161 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 214,694,032 214,695,978 GRMZM2G093744 bhlh162 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 83,606,148 83,609,440 GRMZM5G865967 bhlh163 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 172,897,122 172,899,655 Zm00001d031044 bhlh163 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 174,811,257 174,813,790 GRMZM2G058451 bhlh164 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 155,380,896 155,384,951 Zm00001d021701 bhlh164 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 160,737,172 160,741,199 GRMZM2G145579 bhlh165 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 47,618,440 47,620,839 Zm00001d049870 bhlh165 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 49,701,453 49,703,760 GRMZM2G114444 bhlh166 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 218,561,885 218,567,450 GRMZM2G147685 bhlh167 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 52,437,508 52,442,955 Zm00001d003677 bhlh167 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 53,849,188 53,854,880 GRMZM2G030744 bhlh168 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 214,476,567 214,480,784 Zm00001d018416 bhlh168 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 220,300,212 220,303,859 GRMZM2G113257 bhlh169 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 187,772,580 187,773,665 Zm00001d005919 bhlh169 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 192,761,281 192,762,454 GRMZM2G137358 bhlh17 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 289,415,533 289,418,791 Zm00001d034503 bhlh17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 294,741,570 294,745,159 GRMZM2G082630 bhlh170 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 200,448,170 200,449,019 Zm00001d031818 bhlh170 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 202,899,615 202,900,464 GRMZM2G024530 bhlh171 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 11,565,132 11,570,108 Zm00001d045046 bhlh171 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 10,972,295 10,977,439 GRMZM2G017586 bhlh172 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 35,609,001 35,611,562 Zm00001d024679 bhlh172 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 83,443,909 83,447,138 GRMZM5G882527 bhlh173 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 195,753,205 195,755,657 Zm00001d031665 bhlh173 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 198,078,399 198,080,869 GRMZM2G016039 bhlh174 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 63,778,666 63,781,023 GRMZM2G173534 bhlh175 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 156,404,566 156,407,511 Zm00001d042263 bhlh175 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 157,976,446 157,978,862 GRMZM2G082343 bhlh18 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 9,626,997 9,629,496 Zm00001d013370 bhlh18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 9,971,912 9,974,426 GRMZM2G066057 bhlh19 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 8,416,520 8,418,397 Zm00001d008444 bhlh19 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 8,757,504 8,759,356 GRMZM2G414252 bhlh20 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 185,616,246 185,617,611 Zm00001d005841 bhlh20 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 190,556,326 190,557,054 AC233899.1_FG002 bhlh21 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 149,930,657 149,932,165 Zm00001d048229 bhlh21 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 152,802,586 152,804,818 GRMZM2G162450 bhlh22 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 75,508,770 75,510,438 Zm00001d009715 bhlh22 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 77,390,569 77,394,258 GRMZM2G178182 bhlh23 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 193,433,358 193,435,869 Zm00001d006110 bhlh23 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 198,518,592 198,520,833 GRMZM2G085751 bhlh24 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 225,161,834 225,165,399 Zm00001d053391 bhlh24 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 228,952,679 228,956,244 GRMZM2G081816 bhlh25 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 219,263,852 219,266,149 Zm00001d044242 bhlh25 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 222,847,014 222,848,459 GRMZM2G018472 bhlh26 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 168,430,589 168,435,266 Zm00001d030971 bhlh26 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 170,169,839 170,174,596 GRMZM2G092091 bhlh27 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 272,109,897 272,113,700 Zm00001d033870 bhlh27 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 276,811,932 276,815,539 GRMZM2G155043 bhlh28 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 257,844,735 257,852,201 Zm00001d033413 bhlh28 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 262,398,584 262,399,667 GRMZM2G101350 bhlh29 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 200,993,308 200,996,110 Zm00001d017778 bhlh29 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 206,414,473 206,416,485 GRMZM2G180452 bhlh3 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 29,260,545 29,264,281 Zm00001d028297 bhlh3 Chr1 29,513,368 29,517,917 GRMZM2G036092 bhlh30 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 207,554,896 207,556,510 Zm00001d018056 bhlh30 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 213,279,676 213,281,098 GRMZM2G435015 bhlh31 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 140,262,343 140,265,347 Zm00001d021172 bhlh31 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 144,963,872 144,965,891 GRMZM2G180406 bhlh32 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 162,105,905 162,109,184 Zm00001d042373 bhlh32 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 163,721,949 163,725,152 GRMZM2G015666 bhlh33 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 188,465,323 188,467,491 Zm00001d005939 bhlh33 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 193,440,250 193,442,203 GRMZM2G045109 bhlh34 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 68,081,459 68,085,268 Zm00001d046096 bhlh34 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 63,010,300 63,011,576 GRMZM2G173372 bhlh35 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 7,991,271 7,993,431 Zm00001d027546 bhlh35 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 8,017,653 8,019,823 GRMZM2G008691 bhlh36 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 179,831,785 179,834,012 Zm00001d052192 bhlh36 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 182,751,796 182,753,978 GRMZM2G107672 bhlh37 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 160,532,119 160,533,504 Zm00001d004007 bhlh37 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 75,054,959 75,056,736 GRMZM2G165188 bhlh38 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 4,752,932 4,754,547 Zm00001d048786 bhlh38 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 5,537,283 5,538,661 GRMZM2G162382 bhlh39 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 10,699,275 10,703,311 Zm00001d018967 bhlh39 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 10,976,782 10,980,428 AC177924.2_FG001 bhlh4 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 71,347,459 71,352,265 Zm00001d003964 bhlh4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 72,580,663 72,582,175 GRMZM2G526668 bhlh40 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 82,667,624 82,670,258 Zm00001d050394 bhlh40 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 85,655,816 85,658,613 GRMZM2G171818 bhlh41 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 221,338,746 221,341,097 Zm00001d007311 bhlh41 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 227,455,863 227,458,214 GRMZM2G107276 bhlh42 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 214,199,438 214,201,742 Zm00001d032213 bhlh42 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 217,293,260 217,296,215 GRMZM2G165042 bhlh43 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 252,434,109 252,437,685 Zm00001d033267 bhlh43 Chr1 256,575,051 256,579,029 GRMZM2G175480 bhlh44 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 91,709,652 91,711,010 Zm00001d009999 bhlh44 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 93,996,343 93,997,092 GRMZM2G481280 bhlh45 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 6,917,077 6,917,523 Zm00001d035155 bhlh45 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 7,226,400 7,226,759 GRMZM2G148723 bhlh46 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 1,600,639 1,613,076 Zm00001d039272 bhlh46 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 897,637 901,853 GRMZM2G065374 bhlh47 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 283,670,986 283,676,031 Zm00001d034298 bhlh47 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 288,721,311 288,725,239 GRMZM2G027068 bhlh48 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 291,976,341 291,978,412 Zm00001d034596 bhlh48 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 297,421,545 297,422,826 GRMZM2G137374 bhlh49 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 6,562,587 6,564,261 Zm00001d027496 bhlh49 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 6,561,983 6,563,016 GRMZM2G116785 bhlh5 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 107,553,355 107,556,923 Zm00001d037098 bhlh5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 112,038,762 112,044,232 GRMZM2G137380 bhlh50 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 6,567,359 6,573,560 Zm00001d027497 bhlh50 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 6,567,895 6,569,220 GRMZM2G139372 bhlh51 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 238,494,709 238,498,244 Zm00001d053895 bhlh51 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 243,230,105 243,233,634 GRMZM5G812883 bhlh52 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 39,775,178 39,776,044 GRMZM2G111146 bhlh53 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 198,825,972 198,829,612 Zm00001d017677 bhlh53 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 204,020,338 204,023,940 AC193786.3_FG005 bhlh54 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 157,462,749 157,463,805 Zm00001d011847 bhlh54 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 162,652,002 162,656,985 GRMZM2G030762 bhlh55 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 162,106,868 162,110,024 Zm00001d012067 bhlh55 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 167,566,134 167,569,229 GRMZM2G072376 bhlh56 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 36,921,186 36,922,008 GRMZM2G159937 bhlh57 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 204,715,844 204,717,904 Zm00001d043706 bhlh57 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 207,941,097 207,942,500 AC198518.3_FG005 bhlh58 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 107,386,150 107,387,495 Zm00001d041351 bhlh58 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 113,913,411 113,915,053 GRMZM2G303463 bhlh59 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 227,935,074 227,939,134 Zm00001d007536 bhlh59 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 234,252,951 234,257,011 GRMZM2G417597 bhlh6 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 190,350,810 190,353,409 Zm00001d006022 bhlh6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 195,425,336 195,428,897 GRMZM2G016756 bhlh60 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 5,102,185 5,106,027 Zm00001d013130 bhlh60 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 5,228,815 5,231,062 GRMZM5G818776 bhlh61 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 39,756,428 39,757,291 GRMZM2G333582 bhlh62 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 21,912,581 21,916,036 Zm00001d008853 bhlh62 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 22,586,868 22,590,558 GRMZM2G166642 bhlh63 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 3,342,194 3,344,518 GRMZM2G175955 bhlh64 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 182,200,079 182,224,660 Zm00001d031260 bhlh64 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 184,153,032 184,161,955 GRMZM2G115960 bhlh68 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 48,806,991 48,810,673 Zm00001d040536 bhlh68 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 48,598,914 48,602,327 GRMZM2G378653 bhlh69 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 102,204,171 102,210,509 Zm00001d046759 bhlh69 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 104,670,937 104,675,421 GRMZM2G042920 bhlh7 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 142,141,640 142,143,666 Zm00001d026317 bhlh7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 143,490,316 143,494,748 GRMZM2G397755 bhlh70 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 5,777,497 5,779,734 Zm00001d039459 bhlh70 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 4,941,036 4,943,303 GRMZM2G120021 bhlh71 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 257,791,786 257,797,338 Zm00001d033412 bhlh71 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 262,342,434 262,343,681 GRMZM2G170559 bhlh72 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 155,134,147 155,137,380 Zm00001d016354 bhlh72 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 158,889,636 158,893,874 GRMZM2G008898 bhlh73 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 233,050,785 233,053,965 Zm00001d007768 bhlh73 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 239,284,190 239,287,487 GRMZM2G035156 bhlh74 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 15,133,264 15,135,363 Zm00001d027855 bhlh74 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 15,365,601 15,366,843 GRMZM2G395549 bhlh75 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 113,451,859 113,489,330 GRMZM2G112629 bhlh76 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 29,613,767 29,617,374 Zm00001d040148 bhlh76 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 29,230,164 29,233,762 GRMZM2G463133 bhlh77 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 138,472,851 138,478,264 Zm00001d011212 bhlh77 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 143,076,291 143,081,577 GRMZM2G049686 bhlh78 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 178,465,632 178,471,112 GRMZM2G173862 bhlh79 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 171,949,309 171,951,373 GRMZM2G038479 bhlh8 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 195,089,318 195,090,145 Zm00001d052728 bhlh8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 199,184,093 199,184,920 GRMZM2G142932 bhlh80 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 205,425,915 205,430,161 Zm00001d006578 bhlh80 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 211,375,734 211,378,716 GRMZM5G828396 bhlh81 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 192,065,332 192,068,032 Zm00001d031561 bhlh81 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 194,339,694 194,342,403 GRMZM2G417164 bhlh82 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 78,660,104 78,661,278 Zm00001d009778 bhlh82 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 80,617,513 80,618,172 GRMZM2G169947 bhlh83 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 29,652,992 29,653,739 Zm00001d040152 bhlh83 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 29,271,520 29,275,778 GRMZM2G159456 bhlh84 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 15,267,736 15,269,173 Zm00001d027859 bhlh84 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 15,500,226 15,501,662 GRMZM2G354618 bhlh85 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 39,739,891 39,740,988 Zm00001d049721 bhlh85 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 41,503,972 41,504,835 GRMZM5G818643 bhlh86 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 129,994,890 129,998,161 Zm00001d020826 bhlh86 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 133,997,692 134,000,698 GRMZM2G027563 bhlh87 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 115,302,848 115,305,396 Zm00001d020490 bhlh87 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 118,687,248 118,689,664 GRMZM2G350165 bhlh88 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 181,310,638 181,313,797 Zm00001d000291 bhlh88 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73V4_ctg14 71,867 75,016 AC216731.3_FG001 bhlh89 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 201,922,854 201,924,055 Zm00001d017804 bhlh89 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 207,299,284 207,300,818 GRMZM2G407119 bhlh9 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 145,064,265 145,067,533 Zm00001d047999 bhlh9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 147,624,186 147,626,585 GRMZM2G153454 bhlh90 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 156,776,841 156,779,616 Zm00001d021748 bhlh90 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 162,167,457 162,170,381 GRMZM2G049229 bhlh91 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 112,025,169 112,028,072 Zm00001d047017 bhlh91 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 115,421,894 115,424,005 GRMZM2G164341 bhlh92 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 137,796,648 137,798,798 Zm00001d011187 bhlh92 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 142,339,407 142,340,699 GRMZM5G899865 bhlh93 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 267,629,500 267,631,521 Zm00001d033729 bhlh93 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 272,362,116 272,364,398 GRMZM5G849600 bhlh94 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 219,912,558 219,917,830 Zm00001d044272 bhlh94 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 223,519,903 223,525,403 GRMZM2G107560 bhlh95 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 194,532,042 194,532,930 Zm00001d006150 bhlh95 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 199,785,894 199,786,769 GRMZM2G172297 bhlh96 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 223,952,471 223,954,890 Zm00001d007382 bhlh96 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 230,338,653 230,341,206 AC149829.2_FG004 bhlh97 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 151,395,822 151,396,321 Zm00001d048309 bhlh97 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 154,303,194 154,304,565 GRMZM2G340177 bhlh98 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 80,126,699 80,131,343 Zm00001d046346 bhlh98 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 82,254,067 82,256,584 GRMZM2G076636 bhlh99 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 29,235,609 29,238,897 Zm00001d009013 bhlh99 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 30,167,000 30,168,835 GRMZM2G130953 bif1 Galli et al., 2015; and assigned by the Grassius project, (Yilmaz et al 2009) to iaa35 Chr8 18,321,199 18,323,290 Zm00001d008749 bif1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 18,951,758 18,953,833 GRMZM2G171822 bif2 Classical Gene Chr1 173,865,554 173,867,297 Zm00001d031068 bif2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 175,807,851 175,809,432 GRMZM5G864847 bif4 Galli et al, 2015; assigned by the Grassius project, (Yilmaz et al 2009) to iaa27 Chr6 130,188,997 130,190,406 Zm00001d037691 bif4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 134,088,831 134,092,670 GRMZM2G148937 bige1 Suzuki et al., 2015 Chr5 1,543,960 1,547,006 Zm00001d012883 bige1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 1,584,315 1,587,019 GRMZM2G114793 bip1 Classical Gene Chr5 69,354,043 69,357,915 Zm00001d014993 bip1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 71,285,640 71,289,674 GRMZM2G415007 bip2 from: BT041486 Chr4 240,596,989 240,600,763 Zm00001d054043 bip2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 245,469,383 245,473,221 GRMZM2G471196 bip3 from Li et al 2012 Chr5 7,364,184 7,366,162 GRMZM2G109326 bk2 alignment to cDNA Chr9 123,497,640 123,499,951 Zm00001d047276 bk2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 125,270,207 125,272,239 GRMZM5G844562 bm1 Classical Gene Chr5 99,030,278 99,034,633 Zm00001d015618 bm1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 101,493,553 101,498,009 GRMZM2G347056 bm2 Tang et al., 2013 Chr1 292,165,519 292,171,793 Zm00001d034602 bm2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 297,605,177 297,611,407 AC196475.3_FG004 bm3 Classical Gene Chr4 32,278,881 32,280,752 Zm00001d049541 bm3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 33,817,769 33,820,095 GRMZM2G393334 bm4 Li et al, 2014 Chr9 154,723,992 154,730,009 Zm00001d048514 bm4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 157,624,300 157,629,807 GRMZM2G142832 bnl10.13a Chr10 137,853,898 137,858,727 GRMZM2G113840 bnl5.59a Chr1 183,837,554 183,842,497 Zm00001d031316 bnl5.59a Chr1 185,876,713 185,882,166 GRMZM2G153127 bnl8.15 Chr3 2,060,989 2,068,244 GRMZM2G067371 bnl9.11b(lts) Chr1 73,517,191 73,520,282 GRMZM2G020548 bnlg1014 Chr1 7,034,342 7,040,091 GRMZM2G078088 bnlg1025 Chr1 223,690,871 223,693,268 Zm00001d032454 bnlg1025 Chr1 227,220,061 227,226,179 GRMZM2G466385 bnlg1331 Chr1 259,280,053 259,283,583 Zm00001d033481 bnlg1331 Chr1 263,890,476 263,893,516 Zm00001d027881 bnlg1429 Chr1 16,562,282 16,562,617 GRMZM2G019567 bnlg1484 Chr1 34,960,609 34,962,573 Zm00001d028447 bnlg1484 Chr1 35,263,025 35,264,614 GRMZM5G833153 bnlg149 Chr1 144,957 145,646 GRMZM2G028726 bnlg1556 Chr1 208,478,252 208,483,075 Zm00001d032072 bnlg1556 Chr1 211,385,712 211,390,492 GRMZM5G821828 bnlg1564 Chr1 226,836,898 226,839,806 GRMZM2G012123 bnlg1615 Chr1 193,065,555 193,074,458 GRMZM2G012453 bnlg1615 Chr1 193,074,564 193,078,345 Zm00001d031581 bnlg1615 v4 Chr1 195,388,615 195,402,490 GRMZM2G171073 bnlg1953 Chr1 23,562,530 23,566,071 Zm00001d028139 bnlg1953 Chr1 23,959,615 23,962,773 GRMZM2G017629 bnlg2057 Chr1 184,813,331 184,814,965 Zm00001d031345 bnlg2057 Chr1 186,945,218 186,946,580 GRMZM2G016480 bnlg2238 Chr1 55,080,810 55,087,098 Zm00001d029040 bnlg2238 Chr1 55,709,486 55,715,009 GRMZM2G143703 bnlg2295 Chr1 80,173,133 80,176,373 GRMZM2G063162 bnl(pho80) from: T14681 Chr5 139,395,266 139,403,105 Zm00001d016070 bnl(pho80) Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 142,715,769 142,723,741 GRMZM5G805008 bpd1 Chen et al., 2014 Chr7 37,739,239 37,740,147 Zm00001d019513 bpd1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 38,992,333 38,993,388 GRMZM2G315375 br2 by AY366085 sequence Chr1 202,334,824 202,342,008 Zm00001d031871 br2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 204,748,411 204,755,635 GRMZM2G107322 brc1 Chr4 232,045,412 232,047,833 Zm00001d053617 brc1 Chr4 236,577,171 236,580,231 GRMZM2G047684 brc2 Chr9 86,578,789 86,581,528 GRMZM5G852663 brc2 Chr9 86,651,469 86,654,199 Zm00001d046422 brc2 Chr9 88,938,385 88,941,121 GRMZM2G103773 brd1 from Makervitch et al 2012 Chr1 249,371,977 249,376,239 Zm00001d033180 brd1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 253,162,491 253,166,753 GRMZM2G048294 bri1a Kir et al., 2015 Chr8 154,615,633 154,619,705 Zm00001d011721 bri1a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 159,899,428 159,902,796 GRMZM2G449830 bri1b Kir et al., 2015 Chr5 60,684,674 60,686,106 GRMZM5G842058 brk1 Classical Gene Chr5 216,747,837 216,749,400 GRMZM5G842058 brk1 from maize Cell Genomics Project (Oct 2013) Chr5 216,747,837 216,749,400 GRMZM2G180150 brk3 Facette, MR et al. 2015 Chr10 2,033,382 2,034,248 GRMZM5G886363 brk3 Facette, MR et al. 2015 Chr10 2,011,814 2,017,183 Zm00001d023262 brk3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 1,565,392 1,599,381 GRMZM2G092604 brl1 Kir et al., 2015 Chr7 79,119,386 79,123,848 Zm00001d019983 brl1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 81,911,649 81,915,296 GRMZM2G002515 brl2 Kir et al., 2015 Chr1 113,534,938 113,538,490 Zm00001d000055 brl2 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73V4_ctg10 94,253 97,609 GRMZM2G438007 brl3 Kir et al., 2015 Chr4 65,769,675 65,773,352 Zm00001d050132 brl3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 68,202,250 68,205,876 GRMZM2G163849 brm1 Nelissen et al., 2015 Chr5 68,902,393 68,913,355 Zm00001d014977 brm1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 70,822,621 70,833,837 GRMZM2G065635 brs1 aligns to cDNA Chr1 30,536,285 30,542,652 Zm00001d028325 brs1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 30,793,737 30,799,897 GRMZM2G062788 bsd2 Classical Gene Chr1 158,329,236 158,340,592 Zm00001d030786 bsd2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 159,716,363 159,727,649 GRMZM2G170161 bsdtf1 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 226,346,872 226,351,462 Zm00001d007479 bsdtf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 232,670,519 232,674,294 GRMZM2G368898 bsdtf10 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 146,122,401 146,124,707 Zm00001d026518 bsdtf10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 147,474,669 147,476,975 GRMZM2G013378 bsdtf2 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 41,600,483 41,602,814 Zm00001d040393 bsdtf2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 41,209,163 41,210,950 GRMZM5G870572 bsdtf3 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 33,727,744 33,735,419 Zm00001d049563 bsdtf3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 35,300,551 35,308,212 GRMZM2G127548 bsdtf4 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 164,281,187 164,285,309 Zm00001d051702 bsdtf4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 167,217,231 167,220,804 GRMZM2G451806 bsdtf5 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 121,089,794 121,095,789 Zm00001d015822 bsdtf5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 123,923,364 123,931,531 GRMZM2G145594 bsdtf6 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 204,479,884 204,482,990 Zm00001d017905 bsdtf6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 209,876,443 209,879,538 GRMZM2G111672 bsdtf7 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 170,460,497 170,462,364 Zm00001d022353 bsdtf7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 176,066,383 176,067,741 GRMZM2G027535 bsdtf8 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 172,530,034 172,533,971 Zm00001d012665 bsdtf8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 178,290,064 178,293,854 GRMZM2G167207 bsdtf9 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 14,848,000 14,852,986 Zm00001d045155 bsdtf9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 14,559,471 14,564,663 GRMZM2G168552 bss1 from Virlouvet et al., 2011 Chr8 156,640,234 156,641,211 Zm00001d011813 bss1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 161,930,926 161,931,866 GRMZM2G144081 bt1 Classical Gene Chr5 112,964,229 112,966,353 Zm00001d015746 bt1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 115,748,852 115,750,963 GRMZM2G068506 bt2 Classical Gene Chr4 58,979,526 58,985,686 GRMZM2G068506 bt2 Chr4 58,979,526 58,985,686 Zm00001d050032 bt2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 61,315,575 61,321,350 GRMZM2G041881 btf3 Chr1 2,798,951 2,801,848 Zm00001d027318 btf3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 2,827,035 2,829,836 GRMZM2G105750 bub1 from XP_008650955; Su et al., 2017 Chr7 151,985,560 152,001,155 Zm00001d021588 bub1 Chr7 157,319,980 157,335,608 GRMZM5G899300 bub3 from: NP_001149777; Su et al., 2017 Chr9 20,608,590 20,614,721 Zm00001d045389 bub3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 20,391,918 20,402,487 GRMZM2G446170 burp1 Chr8 175,285,916 175,288,181 Zm00001d012791 burp1 Chr8 181,042,885 181,044,792 GRMZM5G800586 burp2 Chr3 200,503,799 200,505,886 Zm00001d043538 burp2 Chr3 203,302,960 203,305,033 GRMZM2G032145 burp3 Chr7 6,575,550 6,579,920 Zm00001d018837 burp3 Chr7 6,925,327 6,929,344 GRMZM2G078779 burp4 Chr7 131,222,527 131,224,041 Zm00001d020875 burp4 Chr7 135,220,239 135,221,598 GRMZM2G108422 burp5 Chr1 170,735,349 170,736,402 Zm00001d030997 burp5 Chr1 172,610,221 172,611,532 GRMZM2G113229 burp6 Chr1 183,811,717 183,813,646 Zm00001d031312 burp6 Chr1 185,850,815 185,852,753 GRMZM2G146665 burp7 Chr7 91,390,413 91,392,643 Zm00001d020122 burp7 Chr7 94,287,204 94,289,243 GRMZM2G147756 burp8 Chr4 72,842,573 72,845,272 Zm00001d050241 burp8 Chr4 75,536,877 75,538,808 GRMZM2G406170 burp9 Chr7 6,361,037 6,362,223 Zm00001d018830 burp9 Chr7 6,731,455 6,733,751 GRMZM2G366698 bv1 Avila et al, 2016 Chr5 160,747,586 160,759,982 Zm00001d016486 bv1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 164,499,366 164,511,896 GRMZM2G085381 bx1 Classical Gene Chr4 3,260,762 3,263,006 GRMZM2G085381 bx1 Chr4 3,260,762 3,263,006 Zm00001d048709 bx1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 3,833,330 3,835,353 GRMZM2G311036 bx10 from Meihls et al Chr1 66,310,637 66,312,743 Zm00001d029359 bx10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 67,311,965 67,314,047 GRMZM2G336824 bx11 from Meihls et al 2013 Chr1 66,393,409 66,395,849 Zm00001d029356 bx11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 67,228,813 67,231,314 GRMZM2G023325 bx12 from Meihls et al 2013 Chr1 66,506,457 66,507,471 Zm00001d029353 bx12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 67,108,827 67,116,860 AC148152.3_FG005 bx13 Handrick et al., 2016 Chr2 231,952,642 231,954,277 Zm00001d007718 bx13 Chr2 238,143,557 238,145,188 GRMZM2G127418 bx14 Handrick et al., 2016 Chr2 144,827,059 144,828,816 Zm00001d004921 bx14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 148,710,174 148,711,618 GRMZM2G085661 bx2 alignment of sequence Y11368 to B73_v2 (Oct 2011) Chr4 3,265,213 3,267,368 GRMZM2G085661 bx2 Classical Gene Chr4 3,265,213 3,267,368 Zm00001d048710 bx2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 3,837,797 3,839,930 GRMZM2G167549 bx3 Classical Gene Chr4 3,003,162 3,005,932 GRMZM2G167549 bx3 from Butron et al 2010 Chr4 3,003,162 3,005,932 Zm00001d048702 bx3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 3,574,390 3,576,530 GRMZM2G172491 bx4 Classical Gene Chr4 3,051,215 3,054,036 GRMZM2G172491 bx4 from Butron et al 2010 Chr4 3,051,215 3,054,036 Zm00001d048703 bx4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 3,614,699 3,616,705 GRMZM2G063756 bx5 Classical Gene Chr4 3,112,925 3,115,501 GRMZM2G063756 bx5 from Butron et al 2010 Chr4 3,112,925 3,115,501 Zm00001d048705 bx5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 3,672,327 3,674,403 GRMZM6G617209 bx6 from: EU960746; in v3 Chr4 1,252,638 1,254,044 GRMZM2G441753 bx7 alignment to cDNA EU192149; note there is gap in the BAC sequence at this region so gene model is not complete Chr4 18,244,663 18,245,553 GRMZM2G085054 bx8 from alignment of cDNA EU968182.1 to B73 v2 genome (Oct 2011 M Schaeffer) Chr4 3,214,647 3,216,558 Zm00001d048707 bx8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 3,787,419 3,789,065 GRMZM2G161335 bx9 From alignment of AY107409 Chr1 180,333,582 180,335,486 Zm00001d031209 bx9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 182,293,107 182,294,953 GRMZM2G165390 bz1 Classical Gene Chr9 11,779,648 11,781,406 Zm00001d045055 bz1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 11,218,973 11,220,493 GRMZM2G016241 bz2 Classical Gene Chr1 241,430,768 241,432,121 Zm00001d032969 bz2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 245,012,635 245,014,564 GRMZM2G117851 bzip1 from: AY685208 Chr3 212,260,636 212,276,109 Zm00001d043992 bzip1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 215,850,507 215,866,477 GRMZM2G136266 bzip10 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 7,921,801 7,925,637 Zm00001d023507 bzip10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 7,855,627 7,859,481 GRMZM2G033413 bzip100 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 8,230,021 8,240,287 Zm00001d044940 bzip100 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 7,823,935 7,834,292 GRMZM2G129247 bzip101 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 150,274,418 150,276,924 Zm00001d038311 bzip101 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 154,175,962 154,178,461 GRMZM2G159134 bzip102 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 186,805,980 186,810,898 Zm00001d043117 bzip102 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 189,693,131 189,698,040 GRMZM2G092609 bzip103 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 170,106,632 170,111,141 Zm00001d016732 bzip103 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 174,493,368 174,497,696 GRMZM2G098904 bzip104 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 87,150,348 87,153,356 Zm00001d015421 bzip104 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 89,376,383 89,379,344 GRMZM2G056099 bzip105 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 134,188,555 134,195,791 Zm00001d047587 bzip105 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 136,381,079 136,391,778 GRMZM2G055413 bzip106 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 83,866,787 83,869,911 Zm00001d036400 bzip106 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 86,826,580 86,827,383 GRMZM2G094352 bzip107 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 49,989,443 49,992,484 Zm00001d024160 bzip107 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 51,315,314 51,327,171 GRMZM2G033230 bzip108 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 120,135,941 120,137,704 Zm00001d010667 bzip108 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 123,641,909 123,643,672 GRMZM2G366264 bzip109 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 5,534,459 5,537,102 Zm00001d023424 bzip109 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 5,180,381 5,183,180 GRMZM2G079365 bzip110 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 213,863,947 213,880,121 Zm00001d053162 bzip110 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 217,387,342 217,403,410 GRMZM2G073427 bzip111 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 170,592,733 170,597,621 Zm00001d030995 bzip111 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 172,452,608 172,457,478 GRMZM2G445575 bzip113 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 143,949,572 143,957,213 Zm00001d026398 bzip113 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 145,211,405 145,218,613 GRMZM2G428184 bzip114 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 5,738,361 5,741,644 Zm00001d027461 bzip114 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 5,816,871 5,819,671 GRMZM2G157177 bzip115 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 32,163,794 32,172,639 Zm00001d028372 bzip115 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 32,433,751 32,442,505 GRMZM2G132868 bzip116 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 100,221,799 100,225,360 Zm00001d010168 bzip116 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 102,731,520 102,732,709 AC233853.1_FG002 bzip117 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 3,820,878 3,822,105 Zm00001d039383 bzip117 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 3,077,422 3,079,293 GRMZM2G164848 bzip118 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 168,467,346 168,469,169 Zm00001d039206 bzip118 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 172,509,105 172,510,659 GRMZM2G120167 bzip119 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 16,152,931 16,158,076 Zm00001d049135 bzip119 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 17,281,947 17,287,115 GRMZM2G052102 bzip120 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 227,156,011 227,158,307 Zm00001d053442 bzip120 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 231,582,689 231,584,787 GRMZM2G112483 bzip121 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 33,969,678 33,974,472 Zm00001d003180 bzip121 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 34,882,973 34,887,627 GRMZM2G171912 bzip122 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 17,665,206 17,666,030 Zm00001d008734 bzip122 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 18,247,920 18,249,030 GRMZM2G002075 bzip123 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 186,805,631 186,808,459 Zm00001d005884 bzip123 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 191,754,966 191,757,817 GRMZM2G151295 bzip124 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 131,353,502 131,359,160 Zm00001d047519 bzip124 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 133,377,512 133,383,097 GRMZM2G008166 bzip125 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 111,882,466 111,885,951 Zm00001d037170 bzip125 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 114,741,698 114,745,764 AC186606.4_FG003 bzip126 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 182,653,546 182,654,452 Zm00001d031272 bzip126 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 184,633,692 184,634,300 GRMZM2G175280 bzip127 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 197,089,134 197,092,935 Zm00001d031723 bzip127 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 199,502,427 199,506,388 GRMZM2G020799 bzip13 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 204,603,643 204,604,321 Zm00001d017911 bzip13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 210,005,007 210,005,537 GRMZM2G153144 bzip14 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 74,180,653 74,185,259 Zm00001d015118 bzip14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 76,331,375 76,334,353 GRMZM2G402862 bzip15 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 83,701,174 83,703,062 Zm00001d036392 bzip15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 86,656,485 86,658,128 GRMZM2G144480 bzip16 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 197,332,482 197,333,254 Zm00001d052807 bzip16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 201,501,262 201,501,687 GRMZM2G444748 bzip160 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 74,948,230 74,950,097 Zm00001d015153 bzip160 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 77,126,570 77,127,082 GRMZM2G103647 bzip17 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 109,162,612 109,164,995 Zm00001d046937 bzip17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 111,794,987 111,797,460 GRMZM5G848942 bzip19 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 210,000,778 210,007,937 Zm00001d043908 bzip19 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 213,533,138 213,534,279 GRMZM2G170079 bzip20 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 173,480,420 173,483,149 Zm00001d012719 bzip20 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 179,164,455 179,168,169 GRMZM2G368491 bzip21 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 227,566,001 227,567,569 Zm00001d044546 bzip21 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 231,393,431 231,393,859 GRMZM2G043600 bzip22 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 140,743,498 140,746,868 Zm00001d021191 bzip22 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 145,445,635 145,448,907 GRMZM5G821024 bzip23 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 140,955,847 140,960,153 Zm00001d004857 bzip23 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 145,114,887 145,119,368 GRMZM2G038015 bzip24 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 49,087,360 49,088,276 Zm00001d028879 bzip24 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 49,496,883 49,497,413 GRMZM2G080731 bzip25 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 119,662,868 119,665,630 Zm00001d010658 bzip25 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 123,182,660 123,185,472 GRMZM2G177046 bzip26 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 281,401,644 281,402,596 Zm00001d034199 bzip26 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 286,425,311 286,425,868 GRMZM2G131961 bzip27 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 6,719,168 6,724,854 Zm00001d002143 bzip27 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 6,636,877 6,642,835 GRMZM2G029979 bzip28 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 122,676,355 122,688,947 Zm00001d015846 bzip28 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 125,802,400 125,805,852 GRMZM2G138340 bzip29 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 291,173,937 291,177,741 Zm00001d034571 bzip29 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 296,596,877 296,600,683 GRMZM2G074373 bzip3 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 98,816,200 98,821,699 Zm00001d041142 bzip3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 100,232,730 100,240,533 GRMZM2G370026 bzip31 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 179,860,588 179,861,190 Zm00001d031194 bzip31 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 181,836,162 181,836,725 GRMZM5G884349 bzip32 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 62,486,203 62,490,700 Zm00001d024285 bzip32 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 61,712,124 61,716,615 GRMZM2G045236 bzip34 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 147,087,480 147,092,015 Zm00001d038189 bzip34 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 150,913,450 150,943,935 GRMZM2G407631 bzip35 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 98,758,805 98,759,314 Zm00001d046664 bzip35 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 101,174,444 101,175,007 GRMZM2G080111 bzip36 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 101,670,496 101,671,080 Zm00001d015664 bzip36 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 104,209,488 104,209,994 GRMZM2G088140 bzip37 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 37,914,656 37,954,097 Zm00001d024041 bzip37 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 39,073,197 39,078,744 GRMZM2G073892 bzip38 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 217,591,763 217,592,969 Zm00001d018571 bzip38 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 223,499,069 223,500,207 GRMZM2G479760 bzip4 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 210,099,032 210,100,747 Zm00001d018178 bzip4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 215,861,734 215,871,643 AC203957.3_FG004 bzip40 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 175,112,514 175,113,156 Zm00001d005578 bzip40 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 179,315,956 179,317,710 GRMZM2G019446 bzip41 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 288,150,005 288,174,446 Zm00001d034447 bzip41 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 293,289,851 293,293,079 GRMZM2G160136 bzip42 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 47,233,315 47,236,145 Zm00001d040500 bzip42 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 47,004,098 47,005,326 GRMZM2G149150 bzip43 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 194,939,730 194,943,802 Zm00001d052725 bzip43 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 199,034,864 199,038,928 GRMZM2G438293 bzip44 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 165,990,148 165,991,775 Zm00001d012273 bzip44 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 171,684,370 171,696,504 GRMZM2G093020 bzip45 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 143,352,528 143,354,301 Zm00001d030577 bzip45 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 145,543,611 145,545,618 GRMZM2G037910 bzip46 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 194,763,066 194,765,126 Zm00001d006157 bzip46 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 200,049,082 200,051,424 AC200057.4_FG007 bzip47 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 140,723,278 140,728,024 Zm00001d021189 bzip47 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 145,424,990 145,430,280 GRMZM2G160902 bzip48 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 128,957,708 128,959,418 Zm00001d041604 bzip48 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 129,456,939 129,457,397 GRMZM2G478417 bzip49 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 199,519,465 199,525,696 Zm00001d031790 bzip49 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 201,947,175 201,952,222 GRMZM2G358701 bzip5 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 123,688,845 123,694,048 Zm00001d025638 bzip5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 124,744,076 124,745,217 GRMZM2G336766 bzip50 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 234,937,825 234,938,696 Zm00001d053703 bzip50 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 239,596,872 239,597,402 GRMZM2G438652 bzip51 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 3,077,372 3,078,435 Zm00001d018729 bzip51 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 3,195,528 3,196,172 GRMZM2G174284 bzip52 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 51,753,616 51,759,590 Zm00001d028936 bzip52 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 52,167,612 52,173,614 GRMZM2G027976 bzip53 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 196,217,599 196,220,887 Zm00001d043420 bzip53 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 199,110,559 199,113,757 GRMZM2G361847 bzip54 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 174,267,403 174,273,062 Zm00001d022542 bzip54 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 179,748,248 179,754,088 GRMZM2G386273 bzip55 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 5,632,236 5,633,262 Zm00001d013172 bzip55 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 5,811,446 5,811,943 GRMZM2G019907 bzip56 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 187,349,410 187,394,170 GRMZM2G149040 bzip58 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 173,190,014 173,195,685 Zm00001d022442 bzip58 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 177,744,976 177,750,636 GRMZM2G396632 bzip59 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 119,010,423 119,011,019 Zm00001d037360 bzip59 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 122,835,847 122,836,443 GRMZM2G039828 bzip6 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 11,637,318 11,638,804 Zm00001d039658 bzip6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 10,933,798 10,935,205 GRMZM2G025812 bzip60 B73_v2 alignment to cDNA AY104864 Chr9 100,855,159 100,857,284 Zm00001d046718 bzip60 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 103,268,035 103,270,103 GRMZM2G137046 bzip61 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 112,670,143 112,675,317 Zm00001d015743 bzip61 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 115,451,296 115,456,402 GRMZM2G332294 bzip62 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 196,404,600 196,407,477 Zm00001d031697 bzip62 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 198,774,832 198,777,673 GRMZM2G011119 bzip63 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 189,210,328 189,213,307 GRMZM2G473274 bzip64 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 153,788,422 153,790,144 Zm00001d048455 bzip64 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 156,679,754 156,681,460 GRMZM2G180847 bzip65 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 194,071,950 194,077,869 Zm00001d006127 bzip65 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 199,265,525 199,270,738 GRMZM2G342424 bzip66 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 58,361,634 58,369,149 Zm00001d014710 bzip66 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 60,106,171 60,107,716 GRMZM2G365754 bzip67 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 5,921,816 5,922,855 GRMZM2G157722 bzip68 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 57,698,284 57,703,555 Zm00001d050018 bzip68 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 60,011,623 60,016,737 GRMZM2G111504 bzip69 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 186,117,899 186,119,612 GRMZM2G006578 bzip7 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 133,162,136 133,172,180 Zm00001d020938 bzip7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 137,232,926 137,243,079 GRMZM2G060290 bzip70 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 101,925,918 101,931,804 Zm00001d046751 bzip70 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 104,375,107 104,380,709 GRMZM2G019106 bzip71 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 239,534,487 239,538,429 Zm00001d053967 bzip71 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 244,414,417 244,418,397 GRMZM2G030280 bzip72 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 1,640,229 1,650,451 Zm00001d008225 bzip72 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 1,785,019 1,794,777 GRMZM2G175870 bzip73 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 156,230,705 156,237,177 Zm00001d038574 bzip73 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 160,173,085 160,179,557 GRMZM2G358796 bzip74 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 129,930,503 129,931,378 Zm00001d020823 bzip74 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 133,939,918 133,940,505 GRMZM2G168079 bzip75 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 166,357,554 166,362,143 Zm00001d012296 bzip75 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 172,051,538 172,056,127 GRMZM2G134863 bzip76 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 96,717,113 96,724,364 Zm00001d036736 bzip76 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 99,406,292 99,413,471 GRMZM2G066734 bzip77 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 135,645,489 135,646,430 Zm00001d047644 bzip77 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 137,917,348 137,917,737 GRMZM2G353553 bzip78 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 81,928,301 81,930,832 Zm00001d029711 bzip78 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 83,544,940 83,547,374 GRMZM2G030877 bzip79 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 188,665,527 188,672,962 Zm00001d052543 bzip79 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 192,657,367 192,664,592 GRMZM2G146020 bzip8 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 142,765,244 142,769,768 Zm00001d041920 bzip8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 143,644,925 143,649,063 GRMZM2G140355 bzip80 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 85,130,086 85,132,905 Zm00001d046402 bzip80 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 87,461,762 87,465,060 AC190609.3_FG001 bzip81 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 194,461,406 194,464,593 Zm00001d052717 bzip81 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 198,573,893 198,576,750 GRMZM2G137532 bzip82 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 189,016,699 189,017,193 Zm00001d005962 bzip82 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 194,020,190 194,020,684 GRMZM2G000171 bzip83 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 61,724,734 61,728,541 Zm00001d014795 bzip83 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 63,482,860 63,486,476 GRMZM2G361611 bzip84 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 239,887,667 239,890,292 Zm00001d053988 bzip84 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 244,691,517 244,692,145 GRMZM2G125934 bzip85 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 190,471,098 190,480,166 Zm00001d006027 bzip85 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 195,561,468 195,570,994 GRMZM2G171370 bzip86 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 161,590,575 161,596,682 Zm00001d005244 bzip86 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 165,521,128 165,527,158 GRMZM2G000842 bzip87 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 149,721,944 149,728,050 Zm00001d038296 bzip87 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 153,617,288 153,623,323 GRMZM2G425920 bzip88 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 122,253,987 122,259,270 Zm00001d025589 bzip88 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 123,303,091 123,307,977 GRMZM2G158313 bzip89 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 144,011,521 144,013,252 Zm00001d016154 bzip89 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 147,356,832 147,358,697 GRMZM2G092137 bzip9 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 83,788,712 83,791,125 Zm00001d020025 bzip9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 86,720,505 86,722,227 GRMZM2G060109 bzip91 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 214,613,200 214,616,521 Zm00001d007042 bzip91 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 220,735,632 220,738,913 GRMZM2G077124 bzip92 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 174,321,118 174,323,831 Zm00001d022550 bzip92 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 179,802,619 179,805,281 GRMZM2G050912 bzip93 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 93,665,910 93,671,589 Zm00001d046564 bzip93 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 96,085,990 96,091,648 GRMZM5G858197 bzip95 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 175,672,623 175,675,787 Zm00001d042721 bzip95 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 178,186,600 178,189,773 GRMZM2G161009 bzip96 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 119,246,143 119,249,647 Zm00001d010638 bzip96 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 122,764,919 122,767,912 GRMZM2G122846 bzip97 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 165,667,701 165,668,420 Zm00001d051739 bzip97 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 168,580,085 168,580,537 GRMZM2G062391 bzip98 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 56,217,970 56,223,418 Zm00001d029064 bzip98 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 56,911,430 56,916,805 GRMZM5G812774 bzr1 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 77,471,270 77,474,631 Zm00001d046305 bzr1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 79,548,451 79,551,855 GRMZM5G852801 bzr2 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 5,297,544 5,298,608 Zm00001d039439 bzr2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 4,457,841 4,460,509 GRMZM2G307241 bzr3 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 229,089,140 229,092,844 Zm00001d053543 bzr3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 233,528,735 233,529,987 GRMZM2G446515 bzr4 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 62,317,634 62,323,803 Zm00001d019756 bzr4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 56,698,394 56,703,572 GRMZM2G069486 bzr5 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 239,624,836 239,636,828 Zm00001d053975 bzr5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 244,506,167 244,518,266 GRMZM5G868061 bzr6 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 10,517,485 10,518,461 Zm00001d039635 bzr6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 9,812,399 9,813,375 AC194970.5_FG002 bzr7 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 207,890,126 207,891,291 Zm00001d006677 bzr7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 214,086,849 214,088,343 GRMZM2G369018 bzr8 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 147,915,664 147,917,490 Zm00001d016231 bzr8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 151,405,284 151,407,104 GRMZM2G152172 bzr9 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 8,453,673 8,455,727 Zm00001d027587 bzr9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 8,496,660 8,498,315 GRMZM2G005066 c1 Classical Gene Chr9 9,746,518 9,747,591 Zm00001d044975 c1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 8,983,448 8,984,721 GRMZM2G422750 c2 Classical Gene Chr4 192,758,391 192,761,788 Zm00001d052673 c2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 196,893,203 196,896,534 GRMZM2G380515 c2h1 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 125,606,805 125,613,287 GRMZM5G885700 c2h133 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 172,058,302 172,062,571 Zm00001d016793 c2h133 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 176,105,797 176,109,934 GRMZM2G074032 c2h2 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 144,292,832 144,296,553 Zm00001d047976 c2h2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 146,835,862 146,839,383 GRMZM2G465595 c2h25 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 31,769,080 31,772,988 Zm00001d028361 c2h25 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 32,068,552 32,072,460 GRMZM2G050939 c2h26 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 29,281,533 29,285,348 Zm00001d035514 c2h26 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 30,749,990 30,753,788 GRMZM2G023988 c2h3 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 175,731,230 175,738,132 Zm00001d016911 c2h3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 179,711,450 179,716,881 GRMZM2G068710 c2h35 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 10,140,592 10,148,973 Zm00001d023558 c2h35 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 10,165,237 10,166,640 GRMZM2G175000 c2h4 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 40,052,653 40,057,169 Zm00001d035701 c2h4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 41,698,476 41,703,037 GRMZM2G136494 c2h46 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 148,529,899 148,531,915 Zm00001d026684 c2h46 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 149,857,632 149,859,149 GRMZM2G470422 c2h5 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 296,848,076 296,849,261 Zm00001d034783 c2h5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 302,248,572 302,249,757 GRMZM2G119640 c3h1 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 237,433,598 237,440,210 Zm00001d053841 c3h1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 242,143,111 242,149,682 GRMZM2G147623 c3h10 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 114,431,775 114,441,385 Zm00001d004541 c3h10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 117,112,005 117,121,714 GRMZM2G146514 c3h11 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 20,203,138 20,224,156 Zm00001d049223 c3h11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 21,429,671 21,450,419 GRMZM2G069009 c3h12 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 36,833,446 36,838,605 Zm00001d040301 c3h12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 36,557,966 36,563,190 GRMZM2G087032 c3h13 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 161,685,821 161,692,051 Zm00001d042363 c3h13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 163,299,606 163,305,479 GRMZM2G150262 c3h14 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 147,037,098 147,041,632 Zm00001d026587 c3h14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 148,406,795 148,411,190 GRMZM2G099622 c3h15 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 206,567,610 206,570,522 Zm00001d006619 c3h15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 212,747,709 212,749,721 GRMZM2G071034 c3h16 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 3,094,658 3,099,169 Zm00001d001933 c3h16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 3,097,287 3,101,632 GRMZM2G180979 c3h17 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 263,796,852 263,800,378 Zm00001d033610 c3h17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 268,575,554 268,577,794 GRMZM2G151689 c3h18 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 101,513,894 101,516,776 Zm00001d046740 c3h18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 103,969,348 103,972,229 GRMZM2G100794 c3h19 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 122,860,183 122,884,420 Zm00001d004651 c3h19 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 126,256,187 126,280,335 GRMZM2G306357 c3h2 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 219,556,286 219,569,553 Zm00001d044260 c3h2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 223,156,502 223,169,831 GRMZM2G311665 c3h20 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 173,486,547 173,490,629 Zm00001d022427 c3h20 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 177,449,434 177,453,594 GRMZM2G157927 c3h21 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 214,832,691 214,834,785 Zm00001d044074 c3h21 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 218,387,500 218,388,660 GRMZM2G422205 c3h22 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 225,673,226 225,688,992 Zm00001d044481 c3h22 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 229,389,338 229,411,816 GRMZM2G475017 c3h23 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 4,955,650 4,961,914 Zm00001d008323 c3h23 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 5,210,822 5,217,086 GRMZM2G005126 c3h24 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 84,252,239 84,259,713 Zm00001d024703 c3h24 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 84,135,184 84,142,738 GRMZM5G849788 c3h25 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 173,803,063 173,806,170 GRMZM2G110402 c3h26 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 98,477,144 98,480,310 Zm00001d036796 c3h26 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 101,178,916 101,181,950 GRMZM5G845366 c3h27 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 12,394,277 12,396,390 Zm00001d013497 c3h27 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 12,787,522 12,789,765 GRMZM2G036837 c3h28 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 4,916,708 4,925,557 Zm00001d008322 c3h28 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 5,172,219 5,181,074 GRMZM2G089050 c3h29 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 58,232,976 58,237,550 Zm00001d014705 c3h29 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 59,972,600 59,977,078 GRMZM2G149347 c3h3 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 166,060,984 166,063,087 Zm00001d039101 c3h3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 170,023,704 170,025,807 GRMZM2G123876 c3h30 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 294,963,341 294,966,931 Zm00001d034710 c3h30 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 300,423,240 300,426,736 GRMZM2G305582 c3h31 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 77,459,194 77,463,222 Zm00001d024534 c3h31 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 76,841,341 76,845,268 GRMZM5G842019 c3h32 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 158,715,746 158,718,906 AC233871.1_FG008 c3h33 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 1,823,275 1,825,348 Zm00001d021831 c3h33 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 164,100,462 164,102,432 GRMZM2G037200 c3h34 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 196,068,947 196,075,524 Zm00001d017595 c3h34 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 201,207,642 201,214,016 GRMZM2G086994 c3h35 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 36,943,805 36,949,840 Zm00001d040302 c3h35 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 36,669,164 36,675,206 GRMZM2G031827 c3h36 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 69,651,989 69,660,585 Zm00001d009570 c3h36 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 71,232,543 71,233,457 GRMZM2G171942 c3h37 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 17,672,604 17,674,106 Zm00001d008735 c3h37 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 18,255,737 18,257,026 GRMZM2G056920 c3h38 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 234,301,708 234,304,462 Zm00001d053682 c3h38 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 238,942,996 238,945,802 GRMZM5G801627 c3h39 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 132,847,404 132,849,278 Zm00001d037769 c3h39 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 136,802,596 136,803,895 GRMZM2G025014 c3h4 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 233,311,308 233,314,199 Zm00001d007784 c3h4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 239,549,775 239,550,674 GRMZM2G177229 c3h40 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 133,562,993 133,564,875 Zm00001d020954 c3h40 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 137,626,105 137,626,968 GRMZM2G427438 c3h41 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 47,597,558 47,599,537 Zm00001d028828 c3h41 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 47,876,114 47,877,953 GRMZM2G024655 c3h42 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 5,908,910 5,912,846 Zm00001d008356 c3h42 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 6,168,205 6,172,172 GRMZM2G164359 c3h43 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 225,552,715 225,560,422 Zm00001d053397 c3h43 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 229,276,261 229,284,755 GRMZM2G162119 c3h44 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 130,398,102 130,399,300 Zm00001d041639 c3h44 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 130,914,687 130,915,205 GRMZM2G003424 c3h45 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 54,122,528 54,126,795 Zm00001d029010 c3h45 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 54,753,176 54,756,798 GRMZM2G039889 c3h46 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 143,230,970 143,239,777 Zm00001d011355 c3h46 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 147,966,473 147,976,741 GRMZM2G173124 c3h47 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 20,674,613 20,676,836 Zm00001d008812 c3h47 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 21,359,783 21,360,919 GRMZM2G044004 c3h48 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 230,611,403 230,615,986 Zm00001d044667 c3h48 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 234,427,651 234,431,985 GRMZM2G107491 c3h49 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 161,770,572 161,775,615 Zm00001d012049 c3h49 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 167,234,279 167,239,072 GRMZM2G395842 c3h5 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 44,938,811 44,971,017 Zm00001d045887 c3h5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 45,732,153 45,749,402 GRMZM2G346113 c3h50 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 185,559,571 185,563,721 Zm00001d052385 c3h50 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 188,826,682 188,830,788 GRMZM2G068476 c3h51 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 262,230,777 262,236,243 Zm00001d033553 c3h51 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 266,977,364 266,985,110 GRMZM2G124476 c3h52 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 146,582,797 146,586,445 GRMZM2G020928 c3h53 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 164,773,159 164,775,979 Zm00001d039014 c3h53 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 168,713,527 168,714,450 GRMZM2G006493 c3h54 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 13,006,885 13,025,813 Zm00001d023636 c3h54 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 13,145,933 13,165,086 GRMZM2G086614 c3h6 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 132,165,988 132,170,589 Zm00001d047539 c3h6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 134,366,863 134,371,934 GRMZM2G117007 c3h7 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 130,574,595 130,576,060 Zm00001d010956 c3h7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 134,965,004 134,966,797 GRMZM2G315515 c3h8 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 31,410,265 31,411,096 Zm00001d049516 c3h8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 32,965,071 32,965,902 GRMZM5G830949 c3h9 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 146,510,296 146,512,179 Zm00001d011470 c3h9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 151,370,919 151,372,642 GRMZM2G026157 ca2p1 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 12,557,664 12,558,570 Zm00001d013501 ca2p1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 12,924,588 12,927,450 GRMZM2G165488 ca2p10 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 16,480,475 16,484,858 Zm00001d013676 ca2p10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 17,050,121 17,054,266 GRMZM2G104396 ca2p12 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 123,431,302 123,438,343 Zm00001d041491 ca2p12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 123,760,201 123,767,258 GRMZM5G857944 ca2p13 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 211,715,089 211,720,032 Zm00001d018255 ca2p13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 217,462,041 217,466,991 GRMZM2G096016 ca2p14 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 235,103,649 235,106,245 Zm00001d007882 ca2p14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 241,672,970 241,675,483 GRMZM2G038303 ca2p15 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 165,030,959 165,035,270 Zm00001d022109 ca2p15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 170,559,870 170,564,261 GRMZM2G091964 ca2p16 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 263,505,895 263,513,358 Zm00001d033602 ca2p16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 268,308,237 268,315,814 GRMZM2G582893 ca2p2 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 22,308,191 22,311,425 GRMZM2G037630 ca2p3 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 71,589,264 71,595,809 Zm00001d029489 ca2p3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 72,880,539 72,887,083 GRMZM2G040349 ca2p4 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 211,453,451 211,457,855 Zm00001d006835 ca2p4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 217,595,882 217,600,202 GRMZM5G853836 ca2p5 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 174,875,434 174,876,987 GRMZM5G829103 ca2p6 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 250,377,935 250,382,233 Zm00001d033215 ca2p6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 254,416,539 254,420,845 GRMZM2G126957 ca2p7 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 141,891,517 141,897,548 Zm00001d026305 ca2p7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 143,264,094 143,272,292 GRMZM2G361842 ca2p8 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 173,335,601 173,340,617 GRMZM5G865626 ca2p9 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 268,504,277 268,506,002 GRMZM2G303465 ca3p1 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 182,472,591 182,474,866 Zm00001d042968 ca3p1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 185,334,729 185,336,842 GRMZM2G480621 ca3p2 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 567,968 568,904 Zm00001d001775 ca3p2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 546,551 547,601 GRMZM2G169884 ca3p3 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 154,457,527 154,458,030 Zm00001d042197 ca3p3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 155,849,692 155,850,192 GRMZM2G384528 ca3p4 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 164,733,507 164,734,923 Zm00001d022099 ca3p4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 170,256,890 170,257,680 GRMZM2G074773 ca5p1 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 148,048,984 148,050,065 Zm00001d026648 ca5p1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 149,366,118 149,366,501 GRMZM2G440949 ca5p10 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 155,856,085 155,862,224 Zm00001d038557 ca5p10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 159,799,343 159,805,085 GRMZM2G089812 ca5p11 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 34,599,368 34,601,378 Zm00001d028432 ca5p11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 34,899,450 34,900,187 GRMZM2G022162 ca5p12 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 189,855,073 189,858,562 Zm00001d005993 ca5p12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 194,914,879 194,915,718 GRMZM2G113127 ca5p13 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 183,805,913 183,807,419 Zm00001d031310 ca5p13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 185,845,156 185,845,758 GRMZM2G174776 ca5p14 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 198,165,814 198,167,061 Zm00001d052838 ca5p14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 202,307,193 202,307,801 GRMZM2G099461 ca5p15 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 9,072,834 9,073,771 Zm00001d039581 ca5p15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 8,291,514 8,292,125 GRMZM2G078691 ca5p16 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 131,218,518 131,219,657 Zm00001d020874 ca5p16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 135,216,263 135,216,865 GRMZM2G052499 ca5p17 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 6,682,348 6,683,697 Zm00001d023466 ca5p17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 6,445,727 6,447,046 AC201832.3_FG006 ca5p18 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 119,573,868 119,575,960 GRMZM2G479610 ca5p2 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 163,223,636 163,224,280 GRMZM2G161680 ca5p3 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 93,659,875 93,665,056 Zm00001d036648 ca5p3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 96,210,403 96,211,140 GRMZM2G083964 ca5p4 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 298,942,487 298,959,287 Zm00001d034872 ca5p4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 304,416,011 304,432,351 GRMZM2G311316 ca5p5 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 57,549,401 57,552,804 Zm00001d024230 ca5p5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 58,448,599 58,449,354 GRMZM2G375448 ca5p6 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 163,213,351 163,214,685 GRMZM2G124421 ca5p7 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 110,476,000 110,480,388 Zm00001d046967 ca5p7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 113,422,355 113,423,101 GRMZM2G105317 ca5p8 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 225,260,746 225,264,684 Zm00001d007436 ca5p8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 231,673,422 231,677,391 GRMZM2G091433 ca5p9 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 191,046,626 191,052,377 Zm00001d052621 ca5p9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 195,062,098 195,068,004 GRMZM2G046070 cad1 from NM_001137309 Chr2 10,537,220 10,541,464 Zm00001d002346 cad1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 10,649,171 10,653,316 GRMZM2G121897 cadtfr10 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 68,729,341 68,730,919 GRMZM2G146286 cadtfr11 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 219,431,537 219,437,566 Zm00001d032328 cadtfr11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 222,602,363 222,608,275 GRMZM2G167576 cadtfr12 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 37,856,306 37,857,363 Zm00001d045772 cadtfr12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 38,367,392 38,368,180 GRMZM2G020305 cadtfr13 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 204,568,019 204,571,253 GRMZM2G152822 cadtfr14 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 16,202,771 16,203,691 Zm00001d019101 cadtfr14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 16,745,486 16,746,406 GRMZM2G064426 cadtfr15 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 117,330,071 117,333,930 Zm00001d010574 cadtfr15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 120,713,490 120,716,661 GRMZM2G012654 cadtfr16 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 68,994,825 68,997,112 Zm00001d019865 cadtfr16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 71,121,964 71,124,116 GRMZM2G473152 cadtfr2 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 154,450,608 154,451,831 Zm00001d042196 cadtfr2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 155,843,175 155,843,714 GRMZM2G147712 cadtfr3 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 72,873,166 72,879,736 Zm00001d050242 cadtfr3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 75,567,139 75,573,713 GRMZM2G478501 cadtfr4 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 21,156,624 21,175,149 Zm00001d039957 cadtfr4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 20,590,750 20,592,623 GRMZM2G444073 cadtfr5 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 30,460,409 30,461,221 Zm00001d049485 cadtfr5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 31,972,821 31,973,600 GRMZM2G180947 cadtfr6 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 211,052,666 211,054,021 Zm00001d006813 cadtfr6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 217,201,427 217,202,044 GRMZM2G124663 cadtfr7 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 164,127,479 164,128,599 Zm00001d051697 cadtfr7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 167,044,925 167,045,719 GRMZM5G866699 cadtfr8 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 168,982,663 168,990,876 Zm00001d012445 cadtfr8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 174,626,161 174,634,719 GRMZM5G809663 cadtfr9 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 106,425,069 106,426,667 Zm00001d030151 cadtfr9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 108,955,564 108,956,702 GRMZM2G089222 caf1 aligns with AY264368 Chr7 42,230,925 42,231,874 GRMZM2G173923 caf1 Belcher et al. 2015 Chr7 42,211,043 42,244,189 Zm00001d019573 caf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 43,781,038 43,811,942 AC199526.5_FG003 caf2 alignment of cDNA AY264369 GI:30349368 to B73_v2 (Jul 2011) Chr3 58,874,517 58,886,337 AC199526.5_FG003 caf2 Classical Gene Chr3 58,874,517 58,886,337 Zm00001d040696 caf2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 58,880,502 58,892,481 GRMZM2G121878 cah1 from Studer et al 2014 Chr3 215,547,876 215,555,228 Zm00001d044099 cah1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 219,075,378 219,082,694 GRMZM2G348512 cah2 from Studer et al 2014 Chr3 215,506,034 215,518,935 GRMZM2G348512 cah3 one of two gene associated with GRMZM2G34851 in B73_V2 (see Studer et al 2014) Chr3 215,506,034 215,518,935 Zm00001d044096 cah3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 219,038,137 219,043,860 GRMZM2G414528 cah4 from Studer et al 2014 Chr2 187,772,976 187,777,268 Zm00001d005920 cah4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 192,762,349 192,766,625 GRMZM2G145101 cah5 from Studer et al 2014 Chr7 127,621,256 127,626,940 Zm00001d020764 cah5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 131,557,949 131,561,931 GRMZM2G094165 cah6 from Studer et al 2014 Chr8 146,085,244 146,092,203 Zm00001d011454 cah6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 150,927,227 150,934,087 GRMZM2G117582 cal1 Classical Gene Chr6 155,708,190 155,712,626 Zm00001d038545 cal1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 159,656,851 159,657,300 GRMZM2G067511 cal2 Classical Gene Chr3 38,428,315 38,432,905 Zm00001d040323 cal2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 38,197,170 38,197,511 GRMZM2G152891 cal3 Classical Gene Chr1 52,092,838 52,096,639 Zm00001d028948 cal3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 52,518,690 52,523,101 GRMZM2G143205 camta1 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 70,964,747 70,973,190 Zm00001d003958 camta1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 72,202,914 72,211,422 GRMZM2G032336 camta2 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 149,639,376 149,658,357 Zm00001d021516 camta2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 154,821,346 154,840,399 GRMZM2G171600 camta3 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 158,938,555 158,944,768 Zm00001d042313 camta3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 160,480,671 160,486,892 GRMZM2G447551 camta4 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 19,788,672 19,813,731 Zm00001d028007 camta4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 20,105,976 20,131,237 GRMZM2G152661 camta5 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 109,591,875 109,599,342 Zm00001d025235 camta5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 110,432,656 110,441,915 GRMZM2G056014 cap1 Classical Gene Chr8 132,408,451 132,413,070 Zm00001d011013 cap1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 136,856,323 136,861,244 GRMZM2G141704 cap2 Chr1 42,849,862 42,855,504 GRMZM2G428096 cap2 Chr1 42,855,656 42,857,040 Zm00001d028687 cap2 v4 Chr1 43,083,284 43,088,852 GRMZM2G162426 cap3 from: AFW88771 Chr9 139,025,595 139,031,089 Zm00001d047769 cap3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 141,363,314 141,368,940 AC233878.1_FG004 cap4 Chr1 272,711,753 272,730,612 Zm00001d033886 cap4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 277,447,305 277,479,291 GRMZM2G065494 cas1 Chr4 238,310,811 238,319,374 Zm00001d053889 cas1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 243,042,533 243,050,543 GRMZM2G088212 cat1 Classical Gene Chr5 63,593,142 63,597,617 Zm00001d014848 cat1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 65,456,721 65,461,269 GRMZM2G090568 cat2 Classical Gene Chr1 7,153,870 7,156,146 Zm00001d027511 cat2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 7,144,392 7,146,668 GRMZM2G079348 cat3 Classical Gene Chr4 240,651,914 240,655,881 Zm00001d054044 cat3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 245,523,681 245,525,759 GRMZM5G809587 cax1 Chr8 78,171,551 78,175,986 Zm00001d009763 cax1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 80,087,989 80,092,194 GRMZM2G040017 cax2 aligns to sequence AB044567 in B73_v2 assembly Chr2 4,585,422 4,590,928 Zm00001d002022 cax2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 4,547,285 4,552,574 GRMZM2G011592 cax3 aligns to AY108295 on B73_v2 Chr3 227,277,700 227,282,452 Zm00001d044533 cax3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 231,100,304 231,105,284 GRMZM2G107575 cbl1 Zhang et al., 2016 Chr1 94,993,988 94,998,653 GRMZM2G116584 cbl10 Zhang et al., 2016 Chr3 220,604,800 220,608,677 GRMZM2G007555 cbl11 Zhang et al., 2016 Chr1 167,215,863 167,225,574 GRMZM2G137751 cbl12 Zhang et al., 2016 Chr2 30,021,407 30,023,024 GRMZM2G173424 cbl2 Zhang et al., 2016 Chr3 115,377,120 115,403,275 GRMZM2G112672 cbl3 Zhang et al., 2016 Chr1 253,698,726 253,716,291 Zm00001d033295 cbl3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 257,899,024 257,916,953 GRMZM2G001221 cbl4 Zhang et al., 2016 Chr6 159,455,359 159,458,229 Zm00001d038730 cbl4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 163,424,160 163,426,976 GRMZM2G041729 cbl5 Zhang et al., 2016 Chr3 223,169,117 223,172,637 GRMZM2G010093 cbl6 Zhang et al., 2016 Chr10 7,732,074 7,735,779 Zm00001d023504 cbl6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 7,631,028 7,634,680 GRMZM2G033680 cbl7 Zhang et al., 2016 Chr10 7,869,640 7,874,007 GRMZM2G110080 cbl8 Zhang et al., 2016 Chr4 220,865,888 220,867,679 GRMZM2G015324 cbl9 Zhang et al., 2016 Chr9 114,480,823 114,485,894 GRMZM2G113453 cbp1 from: L01496 Chr5 174,362,481 174,368,947 Zm00001d016856 cbp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 178,414,694 178,421,024 GRMZM2G018837 cbp2 Chr4 235,806,854 235,815,316 Zm00001d053753 cbp2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 240,492,305 240,500,796 GRMZM2G416388 cbs1 aligns with sequence in Avramova et al., 1996 (Fig 3) and Sorghum BAC sequence AF124045 in the syntenous region. Chr1 273,932,226 273,937,442 Zm00001d033925 cbs1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 278,704,407 278,706,905 GRMZM2G014902 cca1 from: EU955544; and assigned by the Grassius project, (Yilmaz et al 2009) to mybr79 Chr4 32,527,798 32,560,791 Zm00001d049543 cca1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 34,070,590 34,104,400 GRMZM2G062772 ccamk1 B73_v2 alignment to seqeunce accession DQ403196 (referenced in Ma et al 2012) Chr4 201,540,262 201,543,535 Zm00001d052944 ccamk1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 205,745,035 205,748,279 GRMZM2G158657 ccd7 Owens et al., 2014 Chr2 20,083,041 20,085,698 Zm00001d002736 ccd7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 20,731,283 20,734,451 GRMZM2G446858 ccd8 Guan et al., 2012 Chr3 197,085,779 197,089,273 Zm00001d043442 ccd8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 200,059,008 200,062,529 GRMZM2G098298 ccp1 Classical Gene Chr5 158,904,820 158,908,319 Zm00001d016446 ccp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 162,603,198 162,606,546 GRMZM2G038636 ccp2 Classical Gene Chr7 122,016,558 122,021,703 Zm00001d020636 ccp2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 125,837,492 125,842,596 GRMZM2G073465 ccp3 Chr10 144,912,181 144,916,261 Zm00001d026458 ccp3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 146,241,809 146,245,690 GRMZM2G066326 ccp5 alignment to cDNAs Chr6 39,529,235 39,530,882 Zm00001d035689 ccp5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 41,139,965 41,141,457 GRMZM2G170457 ccr1 Chr1 290,295,024 290,298,191 Zm00001d034528 ccr1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 295,707,225 295,710,471 GRMZM2G064896 ccr2 Chr2 149,136,004 149,139,243 Zm00001d004997 ccr2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 153,083,988 153,087,202 GRMZM2G038301 ccs1 Belcher et al., 2015 Chr1 281,272,122 281,275,134 Zm00001d034196 ccs1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 286,308,027 286,310,892 GRMZM2G381691 cct1 from coordinates in Hung et al 2012 Chr10 94,262,291 94,264,845 Zm00001d024909 cct1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 94,430,850 94,433,495 GRMZM2G082924 cda1 Chr7 24,237,831 24,240,669 GRMZM2G008216 cda2 Chr2 170,859,967 170,862,507 GRMZM2G008327 cdc2 EU961894 Chr1 3,872,113 3,877,700 Zm00001d027373 cdc2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 3,960,300 3,964,921 GRMZM2G063192 cdc201 Zheng et al., 2016 Chr4 159,201,602 159,204,082 Zm00001d000168 cdc201 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73V4_ctg50 189,024 191,498 GRMZM2G130425 cdc202 Zheng et al., 2016 Chr5 137,431,853 137,435,424 GRMZM2G134917 cdj1 Chr1 285,992,073 285,995,271 Zm00001d034368 cdj1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 291,055,449 291,058,538 GRMZM2G364069 cdj2 Classical Gene Chr1 250,153,164 250,156,813 Zm00001d033210 cdj2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 254,194,092 254,197,449 GRMZM2G166771 cdk8 Nunez-Rios et al., 2017 Chr5 45,567,569 45,573,392 Zm00001d014438 cdk8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 46,913,470 46,918,669 GRMZM2G119494 cdo1081a from: EU969516 Chr1 5,338,770 5,342,488 Zm00001d027441 cdo1081a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 5,431,259 5,434,466 GRMZM2G056462 cdo938a Chr1 55,444,071 55,454,067 Zm00001d029048 cdo938a Chr1 56,094,245 56,104,240 GRMZM2G115518 cdpk1 from sequence D84507 Chr5 60,830,003 60,836,777 Zm00001d014773 cdpk1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 62,639,884 62,646,464 GRMZM2G320506 cdpk10 from: AJ007366 Chr5 4,670,693 4,674,066 Zm00001d013109 cdpk10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 4,781,512 4,784,720 GRMZM2G047486 cdpk11 Chr2 136,808,741 136,813,600 Zm00001d004812 cdpk11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 140,809,252 140,813,969 GRMZM2G173928 cdpk13 from: D84508 Chr6 84,540,654 84,547,361 Zm00001d036416 cdpk13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 87,481,068 87,487,593 GRMZM2G178756 cdpk14 from: EU946805 Chr6 62,895,992 62,899,068 Zm00001d036008 cdpk14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 65,514,626 65,517,557 GRMZM2G365815 cdpk2 from: EU958676 Chr2 149,142,039 149,144,480 Zm00001d004998 cdpk2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 153,089,892 153,092,511 GRMZM2G168706 cdpk3 from alignment of cDNA sequence D85039 to B73_V2 Chr2 203,612,491 203,616,678 Zm00001d006479 cdpk3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 209,563,817 209,568,015 GRMZM2G321239 cdpk4 from sequence D87042 alignment to B73_V2 Chr10 134,942,355 134,946,973 Zm00001d026018 cdpk4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 136,174,872 136,179,753 GRMZM2G314396 cdpk5 Chr2 14,545,463 14,553,791 Zm00001d002540 cdpk5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 14,993,653 14,998,930 GRMZM2G081310 cdpk7 from: L15390 Chr4 157,020,786 157,026,774 Zm00001d051502 cdpk7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 160,498,471 160,504,465 GRMZM2G154489 cdpk8 from: U28376 Chr7 152,988,408 152,989,553 Zm00001d021623 cdpk8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 158,301,155 158,305,234 GRMZM2G322186 cef1 From Entrez Gene 100284775 Chr3 49,620,840 49,626,586 Zm00001d040555 cef1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 49,418,717 49,420,159 GRMZM2G158526 cenH3 From homology to cDNA sequence Chr6 155,443,675 155,448,220 GRMZM2G114315 cenpc1 Chr3 218,621,155 218,631,182 Zm00001d044220 cenpc1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 222,160,707 222,170,731 GRMZM2G112336 cesa1 Classical Gene Chr8 79,738,607 79,744,724 Zm00001d009795 cesa1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 81,764,683 81,771,357 GRMZM2G445905 cesa10 from: AY372244 Chr1 234,316,246 234,326,747 Zm00001d032776 cesa10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 237,886,808 237,891,037 GRMZM2G055795 cesa11 from: AY372245 Chr3 198,438,731 198,444,359 GRMZM2G142898 cesa12 from: AY372246 Chr7 117,546,197 117,550,877 Zm00001d020531 cesa12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 121,208,571 121,213,304 GRMZM2G037413 cesa13 Xiao et al., 2017 Chr2 29,981,034 29,986,917 GRMZM2G027723 cesa2 Classical Gene Chr6 128,743,576 128,750,030 Zm00001d037636 cesa2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 132,563,362 132,570,425 GRMZM2G039454 cesa3 Classical Gene Chr3 11,648,913 11,655,958 Zm00001d039660 cesa3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 10,945,251 10,952,016 GRMZM2G424832 cesa4 from: EU942461 Chr7 18,620,330 18,626,341 Zm00001d019149 cesa4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 19,277,318 19,283,307 GRMZM2G111642 cesa5 Classical Gene Chr1 290,666,783 290,672,751 Zm00001d034553 cesa5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 296,072,136 296,078,144 GRMZM2G113137 cesa6 Classical Gene Chr1 296,334,073 296,339,855 Zm00001d034770 cesa6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 301,722,755 301,728,981 GRMZM2G025231 cesa7 Classical Gene Chr7 37,037,007 37,042,784 Zm00001d019507 cesa7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 38,301,954 38,308,175 GRMZM2G177631 cesa8 Classical Gene Chr7 26,503,597 26,509,680 Zm00001d019317 cesa8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 27,567,011 27,572,466 GRMZM2G018241 cesa9 Classical Gene Chr2 161,757,546 161,763,704 Zm00001d005250 cesa9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 165,690,684 165,696,645 GRMZM2G026117 cf1 Classical Gene Chr5 84,284,464 84,288,424 Zm00001d015366 cf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 86,475,220 86,478,975 GRMZM5G813259 cfm1 Chr6 162,967,857 162,970,961 GRMZM2G094072 cfm2 from alignment to sequence EU047713 Chr10 123,593,979 123,609,810 Zm00001d025629 cfm2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 124,622,263 124,638,536 GRMZM2G436001 cfm3 from alignment to sequence EU084957 Chr2 228,710,700 228,721,042 Zm00001d007572 cfm3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 235,053,907 235,060,019 GRMZM2G142740 cfm4 Chr7 98,272,614 98,278,027 AC214507.3_FG001 cfm6 from: DQ402046 Chr10 125,952,699 125,954,050 Zm00001d025706 cfm6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 126,880,549 126,888,843 GRMZM2G022489 cg1 Chr3 7,774,552 7,776,125 GRMZM2G113873 cgs1 Chr9 118,703,401 118,709,158 Zm00001d047166 cgs1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 120,520,071 120,525,521 GRMZM2G155329 chi1 Classical Gene Chr1 293,118,119 293,119,647 GRMZM2G155329 chi1 from alignment with sequence EU964968 for chi1, Chr1 293,118,119 293,119,647 Zm00001d034635 chi1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 298,580,972 298,582,430 GRMZM2G119186 chi3 from BLAST to chi1 sequence, mapping data; and synteny with barley and rice Chr5 2,496,042 2,497,691 Zm00001d012972 chi3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 2,582,304 2,584,012 GRMZM2G043453 chld1 Chr5 3,095,928 3,103,654 Zm00001d013013 chld1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 3,206,170 3,213,965 GRMZM2G323024 chlh1 Chr10 147,389,924 147,396,098 GRMZM2G453805 chn1 Chr3 212,090,496 212,091,850 Zm00001d043988 chn1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 215,679,092 215,679,979 GRMZM2G145461 chn2 Classical Gene Chr6 83,025,839 83,027,065 Zm00001d036370 chn2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 85,905,987 85,906,962 GRMZM2G389582 chn3 Classical Gene Chr5 63,306,100 63,308,250 Zm00001d014842 chn3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 65,145,138 65,146,204 GRMZM2G170734 chph1 Owens et al., 2014 Chr7 62,149,059 62,150,389 Zm00001d019758 chph1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 56,865,812 56,867,212 GRMZM2G127421 chph2 Chr1 239,887,471 239,889,132 GRMZM2G177165 chr101 Chr2 237,177,008 237,182,832 Zm00001d007978 chr101 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 244,407,619 244,413,284 GRMZM2G071025 chr106 from ENTREZ GENE 100273981 Chr1 270,318,386 270,325,104 Zm00001d033827 chr106 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 275,021,147 275,027,856 GRMZM2G097289 chr122 Chr10 89,218,737 89,223,927 Zm00001d024816 chr122 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 89,407,915 89,426,926 GRMZM2G130739 chr124 split gene model Chr1 235,255,302 235,258,327 GRMZM2G435541 chr124 split gene model Chr1 235,254,537 235,254,864 GRMZM6G007923 chs1 from: BT042386 & DQ244778 Chr10 18,758,297 18,761,647 GRMZM2G009443 cip1 Classical Gene Chr10 35,591,531 35,598,325 Zm00001d024009 cip1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 36,528,738 36,535,462 GRMZM2G174896 cipk3 Chr1 52,148,170 52,153,288 GRMZM2G383240 cipk8 Chr3 372,718 380,906 Zm00001d000080 cipk8 B73V4_ctg31 421,411 431,957 GRMZM2G028521 citt1 Chr1 10,540,341 10,544,903 Zm00001d027667 citt1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 10,614,579 10,622,700 GRMZM2G143602 cka1 Classical Gene Chr2 236,711,216 236,716,685 Zm00001d007951 cka1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 243,948,909 243,953,867 GRMZM2G047855 cka2 Classical Gene Chr1 279,484,878 279,490,883 Zm00001d034125 cka2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 284,545,422 284,551,392 GRMZM5G845755 cka4 Chr7 2,138,862 2,144,213 Zm00001d018669 cka4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 2,251,936 2,257,510 GRMZM5G857992 ckb1 Chr2 21,659,964 21,665,567 Zm00001d002778 ckb1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 22,322,661 22,328,202 GRMZM2G116885 cki1 Chr1 232,980,076 232,983,251 Zm00001d032732 cki1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 236,508,473 236,511,638 GRMZM2G037926 cki2 Xiao et al., 2017 Chr5 29,641,580 29,644,988 GRMZM2G157510 cki3 Xiao et al., 2017 Chr1 8,442,682 8,446,230 GRMZM2G358931 cki4 Xiao et al., 2017 Chr9 152,252,293 152,255,778 GRMZM2G101613 cki5 Xiao, Q Chr5 209,770,434 209,772,179 GRMZM2G084570 cki6 Xiao et al., 2017 Chr4 178,774,992 178,776,727 Zm00001d052174 cki6 v4 Chr4 181,715,802 181,717,531 GRMZM2G343769 cki7 Xiao et al., 2017 Chr9 7,870,479 7,871,904 GRMZM2G154414 cki8 Xiao et al., 2017 Chr4 5,410,267 5,411,691 GRMZM2G146644 cko1 Classical Gene Chr3 7,601,132 7,605,870 GRMZM2G146644 cko1 from Mameaux et al 2012 Chr3 7,601,132 7,605,870 Zm00001d039520 cko1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 6,768,568 6,770,834 GRMZM2G050997 cko2 from maize Cell Genomics Project (Oct 2013) Chr3 152,240,440 152,243,093 Zm00001d042148 cko2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 153,591,150 153,593,841 GRMZM2G167220 cko3 alignment to AJ606943, and chr 8 genetic map position (Massonneau 2004) Chr8 158,737,677 158,740,474 Zm00001d011890 cko3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 164,045,195 164,048,986 GRMZM5G817173 cko4 from sequence AW506922 and GU160398 Chr3 191,899,705 191,903,570 Zm00001d043293 cko4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 194,807,024 194,810,736 GRMZM2G024476 cko4b from position in SUPL Table S1 of Vyroubalova et al 2009 Chr8 171,917,567 171,921,620 Zm00001d012641 cko4b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 177,673,222 177,677,285 GRMZM2G325612 cko5 from alignment of AQ844401 and GU160400 Chr8 22,250,244 22,254,270 Zm00001d008862 cko5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 22,933,354 22,936,966 GRMZM2G348452 ckx10 from alignment of B73_v2 to FJ269181 Chr1 207,753,174 207,757,725 Zm00001d032046 ckx10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 210,548,810 210,553,536 GRMZM2G122340 ckx11 assigned by Gu et al 2010 Chr10 131,816,214 131,824,636 Zm00001d025885 ckx11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 133,022,288 133,031,500 GRMZM2G008792 ckx12 pre Vyroubalova et al 2009 Chr2 28,171,679 28,176,605 Zm00001d002989 ckx12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 28,930,734 28,935,603 GRMZM2G404443 ckx6 from GU160401 Chr1 230,073,700 230,077,262 Zm00001d032664 ckx6 Chr1 233,548,082 233,551,762 GRMZM2G114427 ckx7 as assigned by Gu et al 2010 Chr4 230,558,257 230,560,081 Zm00001d053578 ckx7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 235,114,056 235,116,023 GRMZM2G134634 ckx8 from SUPL table S1 of Vryoubalova et al 2009 Chr4 230,648,266 230,650,090 GRMZM2G162048 ckx8b aligns to sequece GU160402 for cko8 (Gu et al 2010; Vyroubalova et al 2009) Chr4 230,722,879 230,724,687 Zm00001d053579 ckx8b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 235,221,490 235,224,289 GRMZM2G303707 ckx9 based on AC194337.2-contig42 per Vyroubalova Chr9 81,495,589 81,497,784 Zm00001d046356 ckx9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 83,663,514 83,665,446 GRMZM2G064868 cld1 Chr4 29,145,785 29,159,221 Zm00001d049449 cld1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 30,656,934 30,669,525 AC191109.3_FG001 cle14 Je et al., 2016 Chr2 228,749,730 228,750,254 GRMZM5G818232 cle16 Je et al., 2016 Chr9 141,708,812 141,709,096 GRMZM2G008651 cle20 Je et al., 2016 Chr7 162,750,384 162,751,038 GRMZM5G826174 cle21 Je et al., 2016 Chr1 226,281,053 226,281,753 GRMZM2G070192 cle22 Je et al., 2016 Chr6 158,463,657 158,465,175 GRMZM2G098918 cle23 Je et al., 2016 Chr5 54,443,972 54,445,002 GRMZM2G123818 cle24 Je et al., 2016 Chr4 169,575,895 169,576,594 GRMZM2G525788 cle25 from: LOC103644665 Chr1 63,215,440 63,215,543 GRMZM2G473147 cle26 Je et al., 2016 Chr8 17,245,262 17,246,579 GRMZM2G468688 cle27 Je et al., 2016 Chr10 132,555,330 132,555,915 GRMZM5G875999 cle5 Je et al., 2016 Chr5 13,148,983 13,151,122 Zm00001d013520 cle5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 13,513,911 13,514,693 GRMZM2G052776 cle6 Chr3 196,510,926 196,511,186 Zm00001d043427 cle6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 199,485,601 199,485,861 GRMZM2G372364 cle7 Je et al., 2016 Chr4 7,570,324 7,571,104 GRMZM2G056373 clpp2 from Arabidopsis clpp1 AB022326 & maize BT065143 Chr1 49,617,140 49,619,406 Zm00001d028895 clpp2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 49,992,905 49,996,375 GRMZM2G134668 clx1 Chr2 62,121,211 62,125,114 Zm00001d003857 clx1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 63,033,369 63,037,024 GRMZM2G022180 clx2 Chr10 112,603,406 112,606,897 Zm00001d025305 clx2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 113,480,669 113,484,076 GRMZM5G859195 cmk1 Entrez Gene 100282760 Chr3 187,980,568 187,985,888 Zm00001d043182 cmk1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 190,807,759 190,813,079 GRMZM2G075333 cml1 Chr5 89,189,678 89,194,264 Zm00001d015459 cml1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 91,459,227 91,463,857 GRMZM2G116087 cmu1 aligns to sequence EU968465.1 GI:195642229 Chr8 172,665,323 172,669,357 Zm00001d012674 cmu1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 178,397,389 178,409,967 GRMZM2G179454 cmu2 aligns to sequence EU951879.1 GI:195604333 Chr5 92,220,297 92,223,624 Zm00001d015509 cmu2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 94,540,334 94,543,558 GRMZM2G131205 cncr1 Chr1 211,567,137 211,573,211 Zm00001d032152 cncr1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 214,573,739 214,579,407 GRMZM2G131836 cncr2 Chr7 47,738,518 47,740,886 Zm00001d019669 cncr2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 49,321,600 49,323,862 GRMZM2G097030 cngt1 from sequence FJ748891 Chr7 23,728,517 23,730,596 Zm00001d019265 cngt1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 24,771,102 24,772,823 GRMZM2G169365 cnh1 Chr9 151,083,033 151,087,840 GRMZM2G012717 col10 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 117,553,493 117,555,386 Zm00001d037327 col10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 121,369,894 121,371,711 GRMZM2G095598 col11 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 33,216,134 33,217,640 Zm00001d003162 col11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 34,080,161 34,081,769 GRMZM2G041991 col12 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 204,659,225 204,661,268 Zm00001d017939 col12 Chr5 210,407,150 210,409,118 GRMZM2G038783 col13 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 108,447,974 108,449,794 Zm00001d046925 col13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 111,032,442 111,034,142 GRMZM2G042198 col14 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 162,885,359 162,891,594 Zm00001d051684 col14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 166,653,210 166,659,390 GRMZM2G144346 col2 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 267,460,450 267,462,897 Zm00001d033719 col2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 272,190,270 272,192,279 GRMZM2G021777 col3 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 183,418,226 183,419,769 Zm00001d017176 col3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 188,032,923 188,034,708 GRMZM2G107886 col4 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 31,881,581 31,883,549 Zm00001d045661 col4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 32,056,769 32,058,471 GRMZM2G075562 col5 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 204,223,654 204,228,519 Zm00001d017885 col5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 209,614,260 209,620,254 GRMZM2G013398 col6 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 39,579,626 39,585,243 Zm00001d045804 col6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 40,102,185 40,108,023 AC233888.1_FG002 col7 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 127,941,747 127,942,849 Zm00001d025770 col7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 129,045,322 129,046,879 GRMZM2G114137 col8 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 11,383,616 11,385,590 Zm00001d013443 col8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 11,710,780 11,712,488 GRMZM2G167560 col9 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 165,343,973 165,348,286 GRMZM2G405368 conz1 Classical Gene Chr9 35,635,308 35,639,846 Zm00001d045735 conz1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 36,009,335 36,013,889 GRMZM2G143354 cop1 Chr3 137,371,268 137,378,912 Zm00001d041785 cop1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 138,022,243 138,030,035 GRMZM2G028929 cop2 Chr10 141,389,160 141,394,314 Zm00001d026283 cop2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 142,760,846 142,765,876 GRMZM2G111477 cpn1 from: Z12114; overlap with GRMZM2G458208 Chr5 31,014,041 31,015,732 GRMZM2G458208 cpn1 overlap with GRMZM2G111477 Chr5 31,022,591 31,026,410 Zm00001d014090 cpn1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 31,979,596 31,985,197 GRMZM2G091189 cpn10 from: T18415 Chr4 176,529,663 176,531,725 Zm00001d052101 cpn10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 179,536,713 179,538,773 GRMZM2G416120 cpn2 from: Z12115 Chr1 234,834,523 234,840,412 Zm00001d032789 cpn2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 238,195,329 238,201,192 GRMZM2G153754 cpp1 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 9,332,269 9,337,505 Zm00001d018930 cpp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 9,617,295 9,622,711 GRMZM2G701689 cpp10 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 119,999,294 120,014,210 Zm00001d041445 cpp10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 120,191,179 120,204,285 GRMZM2G059678 cpp11 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 195,307,506 195,312,044 Zm00001d043378 cpp11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 198,206,233 198,229,237 GRMZM2G342588 cpp12 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 122,278,172 122,285,658 Zm00001d037461 cpp12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 126,010,753 126,018,314 AC203865.3_FG001 cpp13 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 119,995,077 119,998,350 Zm00001d041444 cpp13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 120,186,769 120,190,340 GRMZM2G015097 cpp2 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 171,249,195 171,254,764 Zm00001d031008 cpp2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 173,135,204 173,140,452 GRMZM2G173198 cpp3 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 121,766,217 121,767,657 GRMZM2G060170 cpp4 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 158,012,795 158,016,012 Zm00001d038660 cpp4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 161,968,078 161,971,277 GRMZM2G322090 cpp5 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 171,296,402 171,301,898 GRMZM2G366584 cpp6 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 252,868,475 252,877,327 Zm00001d033274 cpp6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 257,013,447 257,022,654 GRMZM2G104246 cpp7 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 172,942,841 172,947,390 Zm00001d012688 cpp7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 178,683,463 178,701,014 GRMZM2G096600 cpp8 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 121,748,701 121,752,582 Zm00001d010713 cpp8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 125,353,037 125,356,933 GRMZM2G388148 cpp9 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 134,229,441 134,245,208 Zm00001d015990 cpp9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 137,506,224 137,522,034 GRMZM2G044481 cpps2 from alignment to genomic sequence Chr1 79,711,199 79,714,961 Zm00001d029648 cpps2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 81,308,232 81,312,047 GRMZM2G068808 cpps3 from: CF634281 Chr10 75,822,918 75,828,439 Zm00001d024512 cpps3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 75,069,687 75,075,183 GRMZM2G156565 cps1 Chr1 295,555,161 295,563,804 Zm00001d034736 cps1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 300,979,516 300,987,458 AC215201.3_FG005 cps2 Chr6 142,273,603 142,277,674 Zm00001d000399 cps2 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73V4_ctg4 28,493 32,925 GRMZM2G566786 cps5 Chr8 10,072,049 10,076,873 GRMZM5G858471 cps5 Belcher et al., 2015 Chr8 10,078,647 10,080,295 Zm00001d008497 cps5 v4 Chr8 10,439,104 10,447,983 GRMZM2G048821 cptk1 Chr1 79,243,435 79,249,210 Zm00001d029632 cptk1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 80,760,581 80,766,373 GRMZM2G032282 cpx2 from alignment of cDNA DQ250641 to B73 AGP_v2 (MLS) Chr10 141,340,391 141,349,914 Zm00001d026277 cpx2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 142,707,254 142,721,455 GRMZM2G051637 cr4 Classical Gene Chr10 5,591,911 5,595,821 GRMZM2G051637 cr4 Chr10 5,591,911 5,595,821 Zm00001d023425 cr4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 5,235,583 5,238,288 GRMZM2G083950 crp1 Classical Gene Chr7 155,872,362 155,876,338 Zm00001d021716 crp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 161,220,659 161,224,485 GRMZM5G802566 crp11 Chr7 131,855,975 131,859,128 GRMZM2G377761 crp4 provided by Barkan (2010) Chr7 8,183,160 8,199,889 Zm00001d018891 crp4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 8,478,320 8,494,304 GRMZM2G040736 crr1 from Cell Genomics project (Oct 2013) Chr2 2,084,221 2,085,003 Zm00001d001865 crr1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 2,078,887 2,079,669 GRMZM2G392101 crr2 Classical Gene Chr10 147,279,947 147,281,251 Zm00001d026594 crr2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 148,669,998 148,671,302 GRMZM2G319187 crr4 Chr8 157,499,048 157,505,111 Zm00001d011849 crr4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 162,775,996 162,782,061 GRMZM6G980248 crr5 from: AY104728 Chr3 148,064,771 148,065,302 GRMZM2G096171 crr7 Chr4 118,088,455 118,091,073 Zm00001d050768 crr7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 121,766,673 121,769,040 GRMZM2G099797 crr8 Chr1 28,417,831 28,422,778 Zm00001d028265 crr8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 28,609,279 28,614,414 GRMZM2G078412 crs1 Classical Gene Chr1 221,032,166 221,044,222 GRMZM2G078412 crs1 from alignment of cDNA AF290414 |gi|9837549 to B73_V2 (Jul 2011) Chr1 221,032,166 221,044,222 Zm00001d032373 crs1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 224,244,775 224,257,054 GRMZM2G132021 crs2 Classical Gene Chr8 12,557,722 12,566,051 GRMZM2G132021 crs2 from alignment of B73_v2 to cDNA AF225708 |gi| 6752918. Chr8 12,557,722 12,566,051 Zm00001d008559 crs2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 12,962,024 12,970,253 GRMZM2G053196 crs3 Chr9 10,846,021 10,852,948 GRMZM2G481231 crs4 Chr2 160,534,929 160,541,718 GRMZM2G358059 crt2 Classical Gene Chr7 24,423,090 24,427,016 Zm00001d019283 crt2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 25,499,872 25,503,849 GRMZM2G108457 crti1 From homology to sequence published by Vallabhaneni and Wurtzel, 2009. Chr4 201,046,911 201,051,551 Zm00001d052932 crti1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 205,269,595 205,274,287 GRMZM2G106531 crti2 From homology to sequence published by Vallabhaneni and Wurtzel, 2009. Chr2 227,035,811 227,040,800 Zm00001d007502 crti2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 233,393,208 233,398,004 GRMZM2G144273 crti3 Owens et al., 2014 Chr5 1,333,687 1,341,860 Zm00001d012868 crti3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 1,369,611 1,375,366 GRMZM2G017805 crup1 aligns to sequence for fl cDNA ZMBFC0139E12 described in suppl data of Bradbury et al 2012 Chr5 35,290,697 35,295,045 Zm00001d014203 crup1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 36,522,150 36,523,481 GRMZM2G049549 cry2 from: BT036578 Chr2 44,186,481 44,190,062 Zm00001d003477 cry2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 45,426,581 45,430,349 GRMZM2G356459 csd1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 39,400,907 39,403,446 GRMZM2G389768 csd2 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 238,665,158 238,666,872 Zm00001d053908 csd2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 243,422,436 243,423,185 GRMZM2G141150 csd3 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 72,594,595 72,596,618 GRMZM5G895313 csd4 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 143,487,131 143,488,239 Zm00001d042044 csr1 v4 Chr3 148,445,216 148,448,764 GRMZM2G318475 csu1132 Chr1 198,252,759 198,255,980 Zm00001d031747 csu1132 Chr1 200,675,571 200,679,396 GRMZM2G009465 csu1138 Chr1 120,200,389 120,202,682 Zm00001d030316 csu1138 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 122,018,879 122,020,803 GRMZM2G037485 csu147 Chr9 101,747,048 101,748,531 GRMZM2G030606 csu173 Chr5 181,437,480 181,439,392 Zm00001d017118 csu173 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 185,974,546 185,976,455 GRMZM2G162292 csu3 Chr1 82,584,684 82,587,334 GRMZM2G154508 csu31a Chr8 146,425,699 146,426,962 GRMZM2G036543 csu323 Chr1 74,274,795 74,287,215 Zm00001d029548 csu323 Chr1 75,699,185 75,711,640 GRMZM2G093405 csu32a Chr3 3,885,932 3,888,723 GRMZM2G164440 csu337 Chr2 156,962,054 156,963,314 GRMZM2G077897 csu452 Chr1 68,568,932 68,572,878 Zm00001d029420 csu452 Chr1 69,749,777 69,753,725 GRMZM2G096247 csu454(gst) Chr1 7,858,766 7,859,978 GRMZM2G135654 csu505(rpL7) Chr1 194,764,577 194,768,032 Zm00001d031640 csu505(rpL7) Chr1 197,108,702 197,111,394 GRMZM2G453794 csu589 Chr1 4,173,400 4,187,541 GRMZM2G006429 csu634 Chr9 136,805,443 136,808,919 GRMZM2G021331 csu849(atpb) from p-csu849 (W21766) Chr8 65,484,575 65,488,309 Zm00001d009488 csu849(atpb) Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 67,043,287 67,046,926 GRMZM2G089491 csu923(sec61) Chr6 95,634,080 95,636,134 GRMZM2G147390 csu948 from: EU966448 Chr10 113,729,637 113,731,267 Zm00001d025338 csu948 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 114,698,888 114,700,369 GRMZM5G809546 csy1 Classical Gene Chr10 52,428,891 52,457,207 Zm00001d000350 csy1 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73V4_ctg35 44,795 47,751 GRMZM2G064732 ct2 Bommert, et al. 2013 Chr1 16,348,267 16,356,203 Zm00001d027886 ct2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 16,722,714 16,730,676 GRMZM2G051943 cta1 Classical Gene Chr2 34,162,588 34,163,936 Zm00001d003190 cta1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 35,066,062 35,067,313 GRMZM2G005633 ctb1 from: M84165 Chr10 127,392,328 127,393,918 Zm00001d025753 ctb1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 128,400,712 128,402,032 GRMZM2G048846 ctn1 Chr7 165,886,707 165,889,308 Zm00001d022160 ctn1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 171,442,295 171,444,896 GRMZM2G063851 cts1 from: W49861 Chr5 123,666,786 123,673,425 Zm00001d015856 cts1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 126,813,401 126,819,662 GRMZM2G166089 cul1 Chr8 126,398,499 126,406,791 GRMZM2G463640 cyb6 Zaidi et al., 2015 Chr5 21,522,922 21,524,744 GRMZM2G034647 cyc1 Classical Gene Chr8 119,587,820 119,590,668 Zm00001d010656 cyc1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 123,103,586 123,106,431 GRMZM2G107377 cyc10 Garza-Aguilar et al., 2016 Chr7 49,750,260 49,752,394 GRMZM2G161382 cyc11 Garza-Aguilar et al., 2016 Chr2 163,951,423 163,953,820 GRMZM2G408242 cyc12 Chr7 137,132,640 137,137,679 Zm00001d021031 cyc12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 140,949,104 140,954,205 GRMZM2G075117 cyc13 Chr4 179,655,519 179,658,130 GRMZM2G073671 cyc3 Classical Gene Chr6 82,783,470 82,787,296 Zm00001d036360 cyc3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 85,712,835 85,716,668 GRMZM2G310115 cyc4 from: Entrez Gene 100274285 Chr8 170,942,614 170,961,820 GRMZM2G005619 cyc5 from: BT055761 Chr8 1,514,389 1,517,712 Zm00001d008221 cyc5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 1,656,468 1,659,625 Zm00001d009011 cyc6 V4 Chr8 30,110,204 30,114,064 GRMZM2G310115 cyc7 Classical Gene Chr8 170,942,614 170,961,820 Zm00001d012560 cyc7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 176,648,813 176,651,657 GRMZM2G138886 cyc8 from: Sabelli et al., 2014 Chr2 18,100,584 18,104,322 Zm00001d002662 cyc8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 18,693,524 18,697,258 GRMZM2G017081 cyc9 Jia et al., 2016 Chr5 59,835,715 59,840,942 GRMZM5G899349 cyp1 Classical Gene Chr3 232,159,860 232,163,704 Zm00001d044673 cyp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 234,567,054 234,570,848 GRMZM2G370745 cyp10 From match to Genbank sequences. Chr3 217,067,316 217,070,532 Zm00001d044153 cyp10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 220,577,774 220,580,963 GRMZM2G129860 cyp11 From homology to Genbank sequence. Chr3 217,218,199 217,221,692 Zm00001d044159 cyp11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 220,748,190 220,754,600 GRMZM2G091588 cyp12 Match to sequence published in Persans et al. Chr2 184,817,709 184,821,832 Zm00001d005822 cyp12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 189,708,364 189,712,407 GRMZM5G837869 cyp13 From homology to Genbank sequence. Chr5 215,877,677 215,882,183 Zm00001d018488 cyp13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 221,696,671 221,702,095 GRMZM2G143202 cyp14 From homology to Genbank sequence. Chr1 86,848,122 86,858,514 Zm00001d029822 cyp14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 88,696,531 88,703,297 GRMZM2G010221 cyp15 From homology to primer sequences from Farre et al. 2013. Chr4 236,268,174 236,272,709 Zm00001d053782 cyp15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 240,980,104 240,984,661 Zm00001d002937 cyp16 v4 Chr2 27,420,578 27,426,388 GRMZM2G138008 cyp17 Suzuki et al., 2015 Chr7 164,026,278 164,028,417 Zm00001d022075 cyp17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 169,511,917 169,513,877 GRMZM2G470442 cyp18 Suzuki et al., 2015 Chr1 73,382,596 73,385,374 Zm00001d029526 cyp18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 74,783,210 74,785,241 GRMZM2G102079 cyp19 from: ACG28049 Chr7 6,540,482 6,542,475 GRMZM2G139467 cyp20 Richter et al., 2016 Chr2 234,927,959 234,929,946 GRMZM2G054603 cyp21 NCBI: not predicted in v4 Chr9 156,449,824 156,452,070 Zm00001d019415 cyp6 v4 Chr7 32,852,022 32,852,396 GRMZM2G167986 cyp8 Classical Gene Chr1 243,707,108 243,709,449 Zm00001d033020 cyp8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 247,311,909 247,314,314 GRMZM2G138248 cyp9 Irmisch et al., 2015 Chr9 79,214,248 79,216,270 Zm00001d046334 cyp9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 81,310,177 81,311,766 GRMZM2G082185 cys1 from: EU969699 Chr8 6,465,005 6,468,479 Zm00001d008379 cys1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 6,803,766 6,807,373 GRMZM2G005887 cys2 from: Entrez Gene 542438 Chr1 177,054,678 177,059,679 Zm00001d031136 cys2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 179,010,347 179,015,072 GRMZM2G168474 czog1 from sequence AF318075 Chr2 19,085,185 19,087,692 Zm00001d000237 czog1 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73V4_ctg44 71,975 73,515 GRMZM2G110511 czog2 Chr8 166,957,556 166,959,303 Zm00001d012335 czog2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 172,652,749 172,654,298 GRMZM2G036340 d1 Teng et al., 2013; from: JX307637 (Chen et al., 2014) Chr3 10,455,337 10,457,618 Zm00001d039634 d1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 9,745,656 9,748,061 GRMZM2G093195 d3 aligment to cDNA gi accession 542580 Chr9 26,725,936 26,729,883 GRMZM2G093195 d3 Classical Gene Chr9 26,725,936 26,729,883 Zm00001d045563 d3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 26,822,040 26,825,680 GRMZM2G144744 d8 Classical Gene Chr1 266,160,101 266,163,168 GRMZM2G144744 d8 Chr1 266,160,101 266,163,168 Zm00001d033680 d8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 270,918,085 270,919,977 GRMZM2G024973 d9 Classical Gene Chr5 11,793,473 11,795,945 GRMZM2G024973 d9 Chr5 11,793,473 11,795,945 Zm00001d013465 d9 Chr5 12,228,329 12,230,206 GRMZM2G084881 dar1 Chr2 166,248,729 166,253,814 Zm00001d005347 dar1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 170,386,767 170,391,584 GRMZM2G070360 dba2 from: EU959295 Chr3 212,237,694 212,247,053 Zm00001d043991 dba2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 215,828,080 215,837,379 GRMZM2G011513 dba3 Chr10 147,971,633 147,973,013 Zm00001d026642 dba3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 149,278,822 149,280,179 GRMZM2G018876 dbb1 Chr2 34,309,164 34,353,587 GRMZM2G143718 dbb10 Li et al., 2017 Chr7 142,719,045 142,722,858 GRMZM2G028594 dbb11 Li et al., 2017 Chr9 19,034,863 19,041,148 GRMZM2G098442 dbb12 Li et al., 2017 Chr10 133,526,489 133,528,033 GRMZM2G131982 dbb2 Li et al., 2017 Chr2 22,527,448 22,530,936 GRMZM5G834596 dbb3 Li et al., 2017 Chr3 5,041,526 5,161,029 GRMZM2G019335 dbb4 Li et al., 2017 Chr4 134,046,087 134,047,565 GRMZM2G118884 dbb5 Li et al., 2017 Chr5 60,454,730 60,456,814 GRMZM2G095299 dbb6 Li et al., 2017 Chr5 182,486,593 182,488,058 GRMZM2G110541 dbb7 Li et al., 2017 Chr5 190,103,401 190,104,973 GRMZM2G070446 dbb8 Li et al., 2017 Chr6 74,621,148 74,626,420 GRMZM2G116475 dbb9 Li et al., 2017 Chr6 84,690,279 84,691,702 GRMZM2G061487 dbf1 from: EU963205; ereb204 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 217,638,400 217,639,968 Zm00001d032295 dbf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 220,776,886 220,777,674 GRMZM2G124037 dbf3 Classical Gene Chr2 195,129,909 195,130,993 Zm00001d006169 dbf3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 200,397,718 200,398,512 GRMZM2G380377 dbp4 from alignment to FJ805752 Chr6 62,712,930 62,714,535 Zm00001d036003 dbp4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 65,322,473 65,323,171 GRMZM2G108147 dbptf1 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 173,593,079 173,596,604 Zm00001d052018 dbptf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 176,597,115 176,600,543 GRMZM2G180430 dbptf2 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 214,138,462 214,147,660 Zm00001d018394 dbptf2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 219,962,014 219,970,575 GRMZM2G149132 dbptf3 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 14,021,102 14,026,143 Zm00001d045128 dbptf3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 13,703,300 13,708,121 GRMZM2G158734 dbptf4 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 88,137,603 88,141,355 Zm00001d046450 dbptf4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 90,491,829 90,495,556 GRMZM2G083459 dcd1 Classical Gene Chr10 90,776,034 90,781,199 Zm00001d024857 dcd1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 90,991,479 90,996,675 GRMZM2G040762 dcl101 from alignment to sequence EU951021 Chr1 4,600,841 4,608,248 Zm00001d027412 dcl101 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 4,724,456 4,736,832 GRMZM2G413853 dcl102 from ChromDB sequence & XM_008666626 Chr1 229,801,762 229,819,069 Zm00001d032655 dcl102 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 233,262,795 233,282,063 GRMZM2G160473 dcl103 from ChromDB sequence Chr10 129,990,456 129,992,917 GRMZM5G814985 dcl104 from ChromDB sequence Chr3 164,408,916 164,418,189 Zm00001d042432 dcl104 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 167,033,044 167,043,664 GRMZM2G301405 dcl105 from ChromDB sequence Chr5 19,916,753 19,927,967 Zm00001d013796 dcl105 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 20,375,070 20,392,119 GRMZM2G024466 dcl4 Petsch et al., 2015 Chr10 130,059,161 130,061,644 GRMZM2G050869 dcl4 Petsch et al., 2015 Chr10 130,072,344 130,073,641 GRMZM2G050882 dcl4 Petsch et al., 2015 Chr10 130,081,664 130,095,543 GRMZM2G160473 dcl4 Petsch et al., 2015 Chr10 129,990,456 129,992,917 Zm00001d025830 dcl4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 131,181,940 131,237,004 GRMZM2G040933 dct1 from B73_v2 alignment to cDNA AB112937 Chr2 188,701,434 188,706,443 Zm00001d005950 dct1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 193,717,043 193,722,275 GRMZM2G086258 dct2 from B73_V2 alignment to cDNA AB112938 Chr1 181,895,436 181,907,817 Zm00001d031253 dct2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 183,880,314 183,892,062 GRMZM2G403562 ddt1 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 145,263,420 145,271,766 Zm00001d004925 ddt1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 149,182,642 149,191,037 GRMZM2G064145 ddt2 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 117,286,975 117,292,108 Zm00001d050753 ddt2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 120,953,532 120,958,594 GRMZM2G337749 ddt3 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 173,435,057 173,440,344 Zm00001d016827 ddt3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 177,540,939 177,547,554 GRMZM2G128176 ddt4 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 171,605,886 171,616,500 Zm00001d022417 ddt4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 177,212,840 177,223,260 AC196465.3_FG006 ddt5 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 149,438,422 149,444,943 Zm00001d011560 ddt5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 154,457,261 154,486,289 GRMZM2G314661 ddt6 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 4,874,772 4,883,107 Zm00001d023391 ddt6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 4,470,647 4,479,429 GRMZM2G091819 de18 from alignment of sequence DQ995287 and Bernardi, J et al. 2012. Chr10 16,522,572 16,525,775 Zm00001d023718 de18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 16,725,273 16,728,563 AF546188.1_FG007 de30 Based on homology to Genbank Acc No. AY434688 (Kim et al. 2004) Chr7 18,877,460 18,878,182 GRMZM2G368890 def1 Liu et al., 2016 Chr10 63,633,347 63,634,218 Zm00001d024303 def1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 62,903,387 62,904,298 GRMZM2G368861 def2 Liu et al., 2016 Chr10 63,631,377 63,634,230 GRMZM2G321753 dek1 Classical Gene Chr1 47,296,057 47,325,628 Zm00001d028818 dek1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 47,566,046 47,589,502 GRMZM2G087226 dek10 Qi et al., 2017 Chr4 236,755,443 236,770,419 Zm00001d053802 dek10 Chr4 241,403,906 241,405,327 GRMZM2G110851 dek2 Qi et al., 2016 Chr1 299,174,521 299,176,527 Zm00001d034882 dek2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 304,635,949 304,637,841 GRMZM2G066749 dek35 Chen et al., 2016 Chr1 267,973,485 267,976,040 Zm00001d033749 dek35 Chr1 272,717,186 272,719,728 GRMZM5G892151 dek36 Wang et al., 2017 Chr5 5,205,807 5,208,368 Zm00001d013136 dek36 Chr5 5,332,065 5,334,626 GRMZM2G048851 dek38 Chr5 53,023,389 53,032,516 Zm00001d014595 dek38 Chr5 54,656,640 54,665,486 GRMZM2G117388 der1 Chr8 108,530,756 108,538,547 Zm00001d010368 der1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 111,481,667 111,489,438 GRMZM2G082976 der2 from: AY854015 Chr5 924,282 928,929 Zm00001d012834 der2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 958,297 964,764 GRMZM2G143817 der3 from: AY854014 Chr6 130,081,997 130,086,777 Zm00001d037687 der3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 133,982,114 133,986,795 GRMZM2G112609 der4 from: AY854016 Chr1 298,904,989 298,911,945 Zm00001d034871 der4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 304,367,515 304,374,498 GRMZM2G004683 dfr1 from EU968270 Chr7 134,116,825 134,118,763 Zm00001d020970 dfr1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 138,208,287 138,210,135 GRMZM2G168893 dfr2 Chr1 189,626,116 189,628,026 Zm00001d031488 dfr2 Chr1 191,775,035 191,776,945 GRMZM5G855672 dhar1 sequence similarity to wheat DHAR cDNA AY074784 Chr8 132,704,679 132,707,776 Zm00001d011034 dhar1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 137,153,416 137,156,549 GRMZM2G005710 dhar2 similar to wheat DHAR cDNA AY074784 Chr8 132,708,403 132,710,915 Zm00001d011035 dhar2 Chr8 137,157,191 137,159,528 GRMZM2G035502 dhar3 from alignment to wheat cDNA sequence AY074784 Chr6 34,430,158 34,433,252 Zm00001d035595 dhar3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 35,975,616 35,978,715 GRMZM2G079440 dhn1 Classical Gene Chr6 137,332,062 137,333,893 Zm00001d037894 dhn1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 141,324,495 141,325,549 GRMZM2G169372 dhn13 Chr1 259,363,954 259,365,311 Zm00001d033483 dhn13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 263,981,642 263,981,944 GRMZM2G448511 dhn14 Chr5 15,590,888 15,591,710 Zm00001d013647 dhn14 Chr5 16,131,695 16,132,021 GRMZM2G373522 dhn3 from: EU944673 Chr4 154,337,342 154,339,063 Zm00001d051420 dhn3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 157,872,166 157,873,662 GRMZM2G031308 dhn6 Chr3 200,237,243 200,241,761 Zm00001d043551 dhn6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 203,608,743 203,613,188 GRMZM2G002786 dhn7 Chr8 174,954,713 174,956,656 Zm00001d012776 dhn7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 180,682,193 180,684,162 GRMZM2G076946 dhr2 Chr3 136,590,830 136,594,609 Zm00001d041776 dhr2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 137,250,657 137,254,412 GRMZM2G015132 dla1 Chr5 155,570,391 155,577,785 Zm00001d016365 dla1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 159,330,634 159,338,014 GRMZM2G080116 dlc1 from Cell Genomics project (Oct 2013) Chr8 61,613,853 61,615,071 Zm00001d009402 dlc1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 62,916,759 62,917,979 GRMZM2G067921 dlf1 Classical Gene Chr7 175,583,965 175,585,451 Zm00001d022613 dlf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 181,089,568 181,090,715 GRMZM2G171317 dmag1 Chr6 96,096,133 96,100,449 Zm00001d036719 dmag1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 98,774,782 98,779,038 GRMZM2G113228 dmag2a Chr10 5,735,648 5,739,240 GRMZM2G114592 dmag2b Chr6 166,365,839 166,367,252 Zm00001d039115 dmag2b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 170,339,523 170,340,530 GRMZM2G109618 dmc1 from: NP 001141379 (Sidhu et al., 2017) Chr3 229,761,643 229,766,558 GRMZM5G856881 dmes1 Owens, BF et al. 2014 Chr3 170,159,124 170,162,114 Zm00001d042584 dmes1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 172,740,091 172,743,103 GRMZM2G172032 dmes2 Owens, BF et al. 2014 Chr8 164,298,387 164,301,819 Zm00001d012197 dmes2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 169,924,646 169,928,100 GRMZM2G005844 dng1 Chr1 23,215,696 23,223,909 Zm00001d028128 dng1 Chr1 23,601,341 23,609,376 GRMZM2G152757 dnp1 Chr10 15,721,331 15,725,740 Zm00001d023698 dnp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 16,001,989 16,006,337 GRMZM2G111510 dnp2 from: AF307152 Chr3 200,107,689 200,115,853 Zm00001d043552 dnp2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 203,662,615 203,670,708 Zm00001d031278 dof1 v4 Chr1 184,859,499 184,860,221 GRMZM2G435475 dof10 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 158,675,548 158,676,679 Zm00001d038693 dof10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 162,633,220 162,633,915 GRMZM2G123900 dof11 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 154,329,458 154,331,722 Zm00001d030727 dof11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 156,208,993 156,211,073 GRMZM2G178767 dof12 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 19,549,995 19,551,017 Zm00001d013783 dof12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 20,028,246 20,077,272 GRMZM2G456452 dof13 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 227,596,191 227,597,088 Zm00001d032578 dof13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 231,149,171 231,150,619 GRMZM2G134545 dof14 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 152,100,148 152,102,643 Zm00001d021591 dof14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 157,433,264 157,434,346 GRMZM2G451771 dof15 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 88,301,230 88,302,056 Zm00001d024790 dof15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 88,456,372 88,457,198 GRMZM2G089850 dof16 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 130,393,751 130,395,017 Zm00001d020837 dof16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 134,352,325 134,353,122 GRMZM2G114998 dof17 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 155,035,798 155,038,140 Zm00001d051439 dof17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 158,534,101 158,536,459 GRMZM2G131897 dof18 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 164,644,881 164,645,955 Zm00001d030897 dof18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 166,299,983 166,300,456 GRMZM2G135703 dof19 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 176,010,296 176,011,726 Zm00001d042736 dof19 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 178,528,531 178,529,508 GRMZM2G009406 dof2 Classical Gene Chr2 189,176,444 189,178,274 Zm00001d005970 dof2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 194,261,659 194,262,393 GRMZM2G371058 dof20 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 149,318,311 149,319,745 Zm00001d038281 dof20 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 153,208,694 153,209,677 GRMZM2G162749 dof21 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 14,850,152 14,853,035 Zm00001d027846 dof21 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 15,060,190 15,063,033 GRMZM2G171852 dof22 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 194,884,355 194,887,188 Zm00001d017575 dof22 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 200,157,732 200,159,935 GRMZM2G010290 dof23 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 137,229,762 137,232,013 Zm00001d026096 dof23 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 138,350,501 138,351,571 GRMZM2G084130 dof24 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 6,118,778 6,119,924 Zm00001d013200 dof24 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 6,348,722 6,349,831 GRMZM2G108865 dof25 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 280,409,564 280,411,218 Zm00001d034163 dof25 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 285,470,390 285,471,475 GRMZM2G061292 dof26 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 18,177,711 18,179,160 Zm00001d013724 dof26 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 18,617,764 18,618,771 GRMZM2G017470 dof27 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 293,405,280 293,407,607 Zm00001d034651 dof27 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 298,855,809 298,858,616 GRMZM2G093725 dof28 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 293,486,116 293,487,783 Zm00001d034653 dof28 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 298,949,392 298,950,066 GRMZM2G140694 dof29 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 201,437,666 201,441,763 Zm00001d017788 dof29 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 206,876,258 206,880,405 GRMZM2G179069 dof3 Chr6 36,946,638 36,948,605 Zm00001d035651 dof3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 38,682,464 38,684,890 AC233935.1_FG005 dof30 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 40,917,520 40,918,920 Zm00001d028625 dof30 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 41,269,098 41,270,850 GRMZM2G144188 dof31 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 2,344,044 2,345,532 GRMZM2G011832 dof32 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 246,538,639 246,539,936 Zm00001d033093 dof32 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 250,113,063 250,114,145 GRMZM2G144172 dof33 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 2,336,487 2,338,861 Zm00001d012963 dof33 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 2,416,250 2,425,046 GRMZM2G064655 dof34 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 203,073,326 203,075,231 Zm00001d006463 dof34 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 208,994,101 208,995,156 GRMZM2G137502 dof36 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 72,625,013 72,627,421 Zm00001d029512 dof36 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 73,971,569 73,973,965 GRMZM2G394973 dof37 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 195,990,512 195,991,615 Zm00001d043402 dof37 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 198,907,070 198,907,852 GRMZM2G042218 dof38 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 166,129,975 166,131,371 Zm00001d012280 dof38 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 171,824,647 171,825,663 GRMZM2G045678 dof39 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 254,619,872 254,621,178 Zm00001d033325 dof39 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 259,066,929 259,067,873 GRMZM2G327189 dof4 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 209,919,655 209,921,032 Zm00001d043904 dof4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 213,449,817 213,451,294 GRMZM2G138455 dof40 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 242,766,583 242,768,989 Zm00001d032999 dof40 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 246,355,067 246,357,254 GRMZM2G142718 dof41 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 147,844,469 147,845,926 Zm00001d026628 dof41 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 149,177,141 149,178,387 GRMZM2G394941 dof42 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 204,282,491 204,284,190 Zm00001d017900 dof42 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 209,782,489 209,783,391 GRMZM2G589696 dof43 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 160,304,743 160,307,885 Zm00001d051577 dof43 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 163,295,675 163,298,554 AC209819.3_FG009 dof44 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 122,590,335 122,590,955 Zm00001d010740 dof44 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 126,441,198 126,441,836 GRMZM2G082490 dof45 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 173,272,809 173,273,930 Zm00001d012703 dof45 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 178,952,194 178,952,865 GRMZM2G176063 dof46 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 126,327,930 126,330,315 Zm00001d041549 dof46 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 126,665,476 126,667,691 AC155434.2_FG006 dof47 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 173,848,308 173,849,744 Zm00001d022525 dof47 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 179,337,787 179,341,946 GRMZM5G880268 dof5 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 133,370,483 133,372,747 Zm00001d011058 dof5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 137,738,410 137,739,805 GRMZM2G089949 dof6 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 40,521,477 40,522,945 Zm00001d040362 dof6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 40,080,595 40,084,385 GRMZM2G378490 dof7 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 6,300,724 6,302,028 Zm00001d039482 dof7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 5,495,949 5,496,644 GRMZM2G463525 dof8 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 44,598,043 44,601,358 Zm00001d040455 dof8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 44,149,350 44,152,864 GRMZM2G449950 dof9 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 164,205,529 164,206,744 Zm00001d051700 dof9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 167,124,669 167,125,430 GRMZM2G435338 dpold3a Chr3 5,429,348 5,438,197 Zm00001d039446 dpold3a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 4,590,953 4,596,170 GRMZM2G005536 dpold3b Chr8 23,383,967 23,389,363 Zm00001d008890 dpold3b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 24,123,677 24,129,093 GRMZM2G044247 dpr1 Chr1 3,642,611 3,645,502 Zm00001d027363 dpr1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 3,775,217 3,778,050 GRMZM2G027835 dps1 from alignment of EU959911 to B73_V3 Chr9 107,331,165 107,334,148 Zm00001d046898 dps1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 109,488,450 109,491,432 GRMZM2G362850 drh1 from: AY466159 Chr3 163,786,353 163,791,421 Zm00001d042416 drh1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 166,411,975 166,416,359 GRMZM2G102218 drl2 yab7 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 146,951,299 146,956,590 Zm00001d048083 drl2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 149,627,346 149,632,516 GRMZM2G123896 drm1 from: AY103814 Chr1 222,643,514 222,645,307 Zm00001d032423 drm1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 225,974,748 225,976,009 GRMZM2G117329 dsc1 B73_V3 alignment to AF006498 Chr4 47,714,348 47,736,769 Zm00001d049871 dsc1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 49,806,179 49,807,432 GRMZM5G872204 dsc2 Takacs, E et al. 2012 Chr1 195,791,317 195,802,900 Zm00001d031667 dsc2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 198,119,172 198,130,785 GRMZM2G059225 dsc3 Takacs, E et al. 2012 Chr7 135,541,997 135,550,832 Zm00001d021087 dsc3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 142,484,402 142,493,269 GRMZM2G006324 dsul1 Augustine et al, 2016 Chr7 159,979,076 159,979,972 AC210848.3_FG004 dsy2 Lee et al., 2015 Chr5 89,755,508 89,760,884 Zm00001d015469 dsy2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 91,973,542 91,980,501 GRMZM2G019121 dts1 Chr5 75,965,462 75,969,666 Zm00001d015168 dts1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 78,188,078 78,192,203 GRMZM2G141399 du1 Classical Gene Chr10 59,516,234 59,527,812 GRMZM2G141399 du1 from alignment to seqence JF273457 Chr10 59,516,234 59,527,812 Zm00001d000002 du1 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73V4_ctg150 193,401 204,736 GRMZM2G433025 duf177 Chr5 216,820,554 216,821,708 GRMZM2G114861 dv1 from: AF272754 Chr2 7,626,633 7,631,527 Zm00001d002186 dv1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 7,609,522 7,614,852 GRMZM2G063048 dvr1 from sequence JX239752.1 Chr1 59,865,304 59,866,740 Zm00001d029150 dvr1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 60,631,458 60,632,663 GRMZM2G013657 dwil1 from sequence reported in Jiang et al., 2012 Chr6 143,487,859 143,494,583 GRMZM2G056975 dxr1 From sequence homology to Genbank sequence. Chr3 30,227,477 30,234,031 Zm00001d040163 dxr1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 29,846,486 29,852,954 GRMZM2G036290 dxr2 Owens et al., 2014 Chr8 8,094,882 8,101,495 Zm00001d008427 dxr2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 8,429,852 8,436,838 GRMZM2G137151 dxs1 From Cordoba et al., 2011. Chr6 146,570,742 146,575,010 Zm00001d038170 dxs1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 150,418,144 150,422,431 GRMZM2G493395 dxs2 see Cordoba et al 2011 Chr7 14,086,686 14,089,909 Zm00001d019060 dxs2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 14,494,700 14,497,925 GRMZM2G173641 dxs3 alignment of sequence HQ113384 to B73_v2 (Cordoba et al 2011) Chr9 20,471,360 20,476,373 Zm00001d045383 dxs3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 20,241,125 20,246,184 Zm00001d045937 dzs10 v4 Chr9 47,916,398 47,916,850 GRMZM2G100018 dzs18 Classical Gene Chr6 121,573,176 121,574,010 Zm00001d037436 dzs18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 125,302,098 125,302,733 GRMZM2G001699 e2f1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 233,461,624 233,465,523 Zm00001d032741 e2f1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 237,008,000 237,012,244 GRMZM2G169709 e2f10 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 9,941,701 9,945,712 Zm00001d045365 e2f10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 19,796,961 19,801,015 GRMZM2G052515 e2f11 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 6,663,939 6,668,632 Zm00001d023465 e2f11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 6,427,340 6,432,014 GRMZM2G060000 e2f12 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 115,306,684 115,309,679 Zm00001d037274 e2f12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 119,093,152 119,097,181 GRMZM2G361659 e2f13 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 182,904,238 182,907,831 Zm00001d052288 e2f13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 186,086,302 186,089,507 GRMZM5G829408 e2f14 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 158,198,224 158,202,485 Zm00001d038664 e2f14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 162,201,437 162,205,584 GRMZM2G148506 e2f15 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 142,876,623 142,885,325 Zm00001d026355 e2f15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 144,165,524 144,168,971 GRMZM2G041701 e2f16 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 109,547,016 109,551,841 Zm00001d050664 e2f16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 112,999,831 113,003,992 AC214168.3_FG001 e2f17 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 56,303,461 56,307,449 Zm00001d003755 e2f17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 57,722,583 57,731,864 GRMZM2G139024 e2f18 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 32,444,644 32,482,308 Zm00001d014132 e2f18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 33,578,544 33,584,855 GRMZM2G086072 e2f19 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 11,479,832 11,487,112 Zm00001d027709 e2f19 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 11,671,171 11,678,446 GRMZM2G333591 e2f2 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 223,993,795 223,997,480 Zm00001d007384 e2f2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 230,438,790 230,442,944 GRMZM2G351232 e2f3 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 262,525,868 262,531,447 Zm00001d033566 e2f3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 267,283,309 267,286,505 AC233850.1_FG005 e2f4 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 169,877,246 169,881,176 Zm00001d016737 e2f4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 174,727,108 174,731,885 GRMZM2G050590 e2f5 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 113,226,437 113,231,629 Zm00001d004512 e2f5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 115,910,521 115,916,044 GRMZM2G063387 e2f6 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 152,941,252 152,946,177 Zm00001d048412 e2f6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 155,819,418 155,824,302 GRMZM2G378665 e2f7 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 205,840,277 205,843,667 Zm00001d017986 e2f7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 211,406,416 211,411,375 GRMZM2G404769 e2f8 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 175,687,853 175,693,606 Zm00001d016907 e2f8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 179,669,837 179,673,125 GRMZM2G462623 e2f9 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 150,408,103 150,413,617 Zm00001d011597 e2f9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 155,439,885 155,445,416 GRMZM2G456746 ea1 Classical Gene Chr7 164,503,140 164,503,655 Zm00001d022090 ea1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 170,014,769 170,015,026 GRMZM2G129157 ebe1 Chr8 158,567,300 158,572,192 Zm00001d011882 ebe1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 163,875,069 163,878,710 GRMZM2G167733 ebe2 from: Entrez Gene 542047 Chr6 109,030,239 109,033,033 Zm00001d037133 ebe2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 113,546,755 113,548,492 GRMZM2G137582 ebf1 Chr6 102,392,990 102,395,999 Zm00001d036880 ebf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 105,523,233 105,526,361 GRMZM2G132903 ech1 Chr8 40,263,840 40,270,804 Zm00001d009182 ech1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 41,433,035 41,440,080 GRMZM2G107654 eif2 from: T18419; gene model GRMZM2G150380 on RefGen_v1 corresponds to the gene model GRMZM2G107654 on RefGen_v2. Chr7 158,175,062 158,191,500 Zm00001d021815 eif2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 163,543,532 163,559,902 GRMZM2G093050 eif3 from: AF073329 Chr3 7,406,093 7,414,401 Zm00001d039518 eif3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 6,553,963 6,562,166 GRMZM2G116034 eif4 from: AF007580 Chr5 56,805,146 56,809,251 Zm00001d014673 eif4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 58,592,104 58,595,583 GRMZM2G027995 eif4a from: U73459 Chr6 87,282,559 87,286,379 Zm00001d036480 eif4a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 89,893,907 89,897,716 GRMZM2G165917 eif5 Classical Gene Chr4 238,064,651 238,068,549 Zm00001d000300 eif5 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73V4_ctg107 25,722 27,077 GRMZM2G113696 eif5a Classical Gene Chr2 209,954,275 209,957,586 Zm00001d006760 eif5a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 216,127,454 216,130,302 GRMZM2G002616 eif6 from: AF076954 Chr3 132,487,154 132,491,827 Zm00001d041682 eif6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 133,075,625 133,080,137 GRMZM2G022019 eif7 from: AF076955 Chr5 30,318,321 30,323,991 Zm00001d014065 eif7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 31,254,129 31,259,724 GRMZM2G317584 eil1 Chr9 133,469,222 133,473,010 AC234203.1_FG011 eil13 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 188,105,263 188,107,161 Zm00001d031445 eil13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 190,274,859 190,276,757 GRMZM2G003558 eil2 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 218,017,798 218,019,723 Zm00001d007188 eil2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 224,126,723 224,128,510 GRMZM2G033570 eil3 Chr1 52,561,894 52,565,938 Zm00001d028974 eil3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 53,368,438 53,370,381 GRMZM2G006752 eil4 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 133,190,586 133,195,177 Zm00001d020939 eil4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 137,263,513 137,265,342 AC210616.4_FG005 eil5 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 124,304,670 124,305,995 Zm00001d050861 eil5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 127,298,106 127,299,431 GRMZM2G151811 eil6 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 173,994,325 173,996,353 Zm00001d022530 eil6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 179,471,476 179,472,840 GRMZM2G044322 eil7 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 43,586,438 43,588,329 Zm00001d003451 eil7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 44,789,073 44,790,671 GRMZM2G040481 eil8 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 176,155,464 176,156,801 Zm00001d016924 eil8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 180,142,976 180,144,265 GRMZM2G068217 ein2 from: AY359584 Chr3 2,874,629 2,881,174 Zm00001d039341 ein2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 2,111,719 2,119,789 GRMZM2G151193 elfa1 Chr8 83,876,978 83,880,502 Zm00001d037905 elfa1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 141,652,564 141,655,295 GRMZM2G343543 elfa10 Chr6 102,923,481 102,926,877 Zm00001d036904 elfa10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 106,006,145 106,009,433 AC233866.1_FG006 elfa11 Chr6 137,601,820 137,603,647 GRMZM2G149768 elfa2 Chr6 136,755,765 136,759,415 Zm00001d037875 elfa2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 140,722,761 140,725,875 GRMZM2G154218 elfa3 Chr6 136,703,065 136,706,224 Zm00001d037873 elfa3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 140,618,302 140,621,444 GRMZM2G153541 elfa9 from NM_001112117.1 Chr9 88,067,950 88,071,249 Zm00001d046449 elfa9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 90,421,943 90,425,048 GRMZM2G122871 elfg1 Classical Gene Chr6 104,230,611 104,235,309 Zm00001d036959 elfg1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 107,398,589 107,403,318 GRMZM2G355752 elip1 from homology with Arabidopsis elip AF134132; Rodriguez et al, 2013 Chr2 234,220,402 234,221,935 Zm00001d007827 elip1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 240,431,883 240,432,461 GRMZM2G425728 elip2 from homology with Arabidopsis elip AF134132; Rodriguez et al, 2013 Chr7 9,706,644 9,708,137 Zm00001d018940 elip2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 9,985,533 9,990,001 GRMZM5G861678 elm1 Classical Gene Chr8 158,299,004 158,303,170 Zm00001d011876 elm1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 163,614,240 163,618,286 GRMZM2G101004 elm2 from primers in Shi et al., 2013 Chr9 89,924,624 89,933,813 Zm00001d046492 elm2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 92,290,431 92,299,586 GRMZM2G384293 emb14 homology to Arabidopsis NOA1; NM_180335 (per Zhang et al., 2013) and from KC460269 (Li et al., 2015) Chr4 241,018,915 241,022,802 Zm00001d054079 emb14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 245,974,145 245,978,028 GRMZM2G119691 emb17 from: GenBank JQ811769 Chr5 213,411,819 213,415,006 Zm00001d018366 emb17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 219,238,426 219,241,502 GRMZM2G136559 emb18 from Genbank AJ431193 Chr9 93,426,568 93,429,048 Zm00001d046555 emb18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 95,832,622 95,834,867 GRMZM5G884466 emb2 Sosso et al, 2012 Chr1 301,344,228 301,363,304 Zm00001d034962 emb2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 306,901,992 306,921,360 GRMZM2G095078 embp1 Chr7 19,265,565 19,270,520 Zm00001d019166 embp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 19,967,615 19,972,466 GRMZM2G078416 emp10 Cai et al., 2017 Chr1 275,735,516 275,741,414 Zm00001d033992 emp10 Chr1 280,585,851 280,594,549 GRMZM2G060516 emp16 Xiu et al, 2016 Chr8 149,423,147 149,426,931 Zm00001d011559 emp16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 154,455,231 154,456,667 AC212684.3_FG012 emp17 Yang et al., 2017 Chr7 172,405,097 172,407,361 Zm00001d022480 emp17 Chr7 178,455,391 178,457,655 GRMZM2G039155 emp2 Classical Gene Chr2 178,295,993 178,300,823 Zm00001d005675 emp2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 183,064,274 183,068,668 GRMZM2G092198 emp4 Classical Gene Chr1 272,101,204 272,103,668 GRMZM2G092198 emp4 from alignment of mRNA DQ291135 Chr1 272,101,204 272,103,668 Zm00001d033869 emp4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 276,803,098 276,804,885 GRMZM2G060536 emp5 from GenBank JX308939 Chr3 147,043,139 147,046,048 Zm00001d042039 emp5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 148,145,123 148,148,309 GRMZM2G048392 emp6 Chettoor et al., 2014 Chr2 188,808,679 188,813,282 Zm00001d005959 emp6 Chr2 193,820,450 193,821,676 GRMZM2G041231 emp7 Sun et al., 2015 Chr8 4,335,406 4,337,599 Zm00001d008298 emp7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 4,550,744 4,552,774 GRMZM2G144610 endo1 Chr9 37,552,323 37,553,942 Zm00001d000418 endo1 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73V4_ctg121 28,928 30,307 GRMZM2G113228 endo3 Chr10 5,735,648 5,739,240 Zm00001d023430 endo3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 5,412,838 5,417,544 GRMZM2G073079 eng1 Chr4 70,091,436 70,093,852 GRMZM2G064302 eno1 Classical Gene Chr9 22,112,240 22,116,928 GRMZM2G064302 eno1 Chr9 22,112,240 22,116,928 Zm00001d045431 eno1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 21,923,413 21,927,989 GRMZM2G048371 eno2 from NM_001111901 Chr1 125,081,143 125,088,083 Zm00001d030373 eno2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 127,221,590 127,227,817 GRMZM2G129189 epr4 Chr5 182,569,001 182,570,164 Zm00001d017152 epr4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 187,133,409 187,134,532 GRMZM5G877500 eps1 Chr9 22,689,315 22,692,638 Zm00001d045450 eps1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 22,538,569 22,542,325 GRMZM2G158024 era1 Belcher et al., 2015 Chr8 70,795,031 70,799,216 Zm00001d009596 era1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 72,389,684 72,393,869 GRMZM5G889719 ereb1 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 115,615,847 115,616,692 Zm00001d000179 ereb1 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73V4_ctg181 214,703 215,548 GRMZM2G434203 ereb10 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 195,729,657 195,730,672 Zm00001d017591 ereb10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 200,872,270 200,873,106 AC209257.4_FG006 ereb100 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 153,427,827 153,429,877 GRMZM2G003466 ereb101 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 20,094,144 20,095,477 Zm00001d028017 ereb101 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 20,410,911 20,411,813 GRMZM2G052667 ereb102 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 120,384,696 120,387,770 Zm00001d020595 ereb102 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 124,130,947 124,133,914 GRMZM2G133168 ereb103 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 4,660,995 4,665,940 Zm00001d039424 ereb103 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 3,934,183 3,934,776 GRMZM5G816314 ereb104 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 191,933,955 191,934,641 Zm00001d017480 ereb104 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 197,251,323 197,252,009 GRMZM2G042756 ereb105 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 16,543,815 16,545,074 Zm00001d002618 ereb105 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 16,960,148 16,960,816 AC198403.3_FG001 ereb106 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 10,908,008 10,908,646 Zm00001d048991 ereb106 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 11,781,874 11,782,518 GRMZM2G057386 ereb107 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 191,428,547 191,430,072 Zm00001d017466 ereb107 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 196,743,195 196,744,184 GRMZM2G480434 ereb108 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 189,829,804 189,830,412 Zm00001d031499 ereb108 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 192,022,614 192,023,222 GRMZM2G141679 ereb109 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 100,267,099 100,269,276 Zm00001d020267 ereb109 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 103,377,384 103,378,274 GRMZM2G076896 ereb111 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 215,636,055 215,638,692 Zm00001d053195 ereb111 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 219,203,452 219,206,136 GRMZM2G039870 ereb112 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 138,460,613 138,461,461 Zm00001d030513 ereb112 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 140,679,257 140,680,084 GRMZM2G457562 ereb113 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 100,502,242 100,503,899 Zm00001d010175 ereb113 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 103,046,515 103,049,001 GRMZM2G008234 ereb114 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 3,186,862 3,189,788 Zm00001d018731 ereb114 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 3,330,940 3,335,717 GRMZM2G069146 ereb115 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 141,174,421 141,175,245 Zm00001d021208 ereb115 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 146,038,525 146,039,307 GRMZM2G131281 ereb116 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 135,625,864 135,626,905 Zm00001d021089 ereb116 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 142,530,712 142,532,073 GRMZM2G113078 ereb117 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 135,582,288 135,584,343 Zm00001d011134 ereb117 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 140,017,045 140,019,085 GRMZM2G081892 ereb118 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 12,197,384 12,199,394 Zm00001d008546 ereb118 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 12,513,751 12,515,017 GRMZM2G309731 ereb119 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 195,911,073 195,911,583 Zm00001d031673 ereb119 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 198,259,709 198,260,293 GRMZM2G100982 ereb12 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 71,940,571 71,941,451 Zm00001d009622 ereb12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 73,601,361 73,602,152 AC200038.4_FG011 ereb120 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 21,602,442 21,603,594 Zm00001d028066 ereb120 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 21,903,337 21,911,942 GRMZM2G301860 ereb122 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 16,258,284 16,259,458 Zm00001d045204 ereb122 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 15,996,069 15,996,644 GRMZM2G461907 ereb123 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 21,635,058 21,635,844 Zm00001d028068 ereb123 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 21,936,312 21,937,568 GRMZM2G399098 ereb124 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 151,187,691 151,189,042 Zm00001d048297 ereb124 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 154,094,049 154,095,017 GRMZM2G023708 ereb125 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 112,324,342 112,325,371 Zm00001d025298 ereb125 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 113,224,465 113,225,283 GRMZM2G169654 ereb126 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 206,678,255 206,680,041 Zm00001d043782 ereb126 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 210,069,089 210,070,258 GRMZM2G000520 ereb127 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 155,637,630 155,639,087 Zm00001d051451 ereb127 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 159,111,690 159,112,469 AC233933.1_FG001 ereb128 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 34,482,445 34,483,233 Zm00001d019475 ereb128 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 35,728,209 35,728,997 GRMZM2G016434 ereb129 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 166,359,251 166,361,971 Zm00001d016616 ereb129 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 170,223,307 170,225,943 GRMZM2G011110 ereb13 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 178,417,315 178,418,683 Zm00001d052152 ereb13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 181,353,441 181,354,229 GRMZM2G399072 ereb130 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 16,118,043 16,122,450 Zm00001d027878 ereb130 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 16,356,238 16,360,518 GRMZM2G087059 ereb131 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 64,001,713 64,004,098 Zm00001d003884 ereb131 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 65,022,354 65,024,176 GRMZM2G165257 ereb132 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 130,100,068 130,101,363 GRMZM2G100727 ereb133 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 150,487,664 150,489,012 Zm00001d038320 ereb133 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 154,382,390 154,383,061 GRMZM2G474326 ereb134 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 198,667,814 198,668,962 Zm00001d043491 ereb134 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 201,681,540 201,682,688 GRMZM2G328197 ereb135 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 77,131,623 77,132,592 Zm00001d036251 ereb135 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 79,944,763 79,945,710 GRMZM2G021369 ereb136 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 210,323,041 210,324,358 Zm00001d018191 ereb136 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 216,112,775 216,113,527 GRMZM2G028386 ereb137 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 201,993,810 201,995,393 Zm00001d031861 ereb137 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 204,458,557 204,459,636 GRMZM2G079653 ereb138 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 100,107,595 100,108,704 Zm00001d015639 ereb138 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 102,583,546 102,584,181 GRMZM2G103085 ereb139 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 209,945,135 209,946,354 Zm00001d018158 ereb139 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 215,716,411 215,717,121 GRMZM2G018398 ereb14 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 176,066,660 176,069,349 Zm00001d052087 ereb14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 179,070,181 179,072,822 GRMZM2G348307 ereb140 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 65,968,744 65,972,918 Zm00001d050137 ereb140 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 68,398,270 68,400,314 GRMZM2G097182 ereb141 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 145,467,972 145,468,863 Zm00001d041981 ereb141 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 146,542,859 146,543,596 GRMZM2G010100 ereb142 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 255,604,709 255,605,965 Zm00001d033353 ereb142 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 260,045,773 260,047,029 GRMZM2G141219 ereb143 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 117,877,954 117,881,926 Zm00001d020540 ereb143 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 121,545,625 121,549,412 GRMZM2G005301 ereb144 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 150,664,312 150,665,813 Zm00001d016260 ereb144 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 154,200,894 154,201,658 GRMZM2G106591 ereb145 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 102,578,638 102,580,044 Zm00001d036889 ereb145 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 105,660,981 105,662,401 GRMZM2G021790 ereb146 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 69,893,597 69,894,451 Zm00001d009573 ereb146 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 71,470,305 71,471,572 GRMZM2G310368 ereb147 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 188,728,319 188,729,366 Zm00001d043205 ereb147 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 191,580,135 191,580,848 GRMZM2G053503 ereb148 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 35,566,541 35,567,721 Zm00001d009103 ereb148 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 36,535,940 36,537,052 GRMZM2G425798 ereb149 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 111,635,997 111,638,209 Zm00001d025281 ereb149 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 112,504,950 112,507,200 GRMZM2G111415 ereb15 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 173,829,508 173,830,759 Zm00001d052026 ereb15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 176,839,153 176,840,184 GRMZM2G033656 ereb150 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 189,870,771 189,871,628 Zm00001d031501 ereb150 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 192,063,299 192,064,027 GRMZM2G379652 ereb153 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 15,671,318 15,672,307 Zm00001d019096 ereb153 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 16,182,358 16,183,347 GRMZM2G026926 ereb154 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 24,360,914 24,363,125 Zm00001d002867 ereb154 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 25,029,642 25,031,000 GRMZM2G060465 ereb155 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 185,036,196 185,037,019 Zm00001d052365 ereb155 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 188,309,258 188,309,908 GRMZM2G421033 ereb156 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 144,707,377 144,708,793 Zm00001d026447 ereb156 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 145,983,350 145,983,982 GRMZM2G087040 ereb157 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 174,205,686 174,206,245 Zm00001d016848 ereb157 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 178,257,482 178,258,778 GRMZM2G002119 ereb158 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 188,630,301 188,631,150 Zm00001d043204 ereb158 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 191,471,796 191,472,356 GRMZM2G009598 ereb159 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 292,178,941 292,180,261 Zm00001d034605 ereb159 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 297,620,879 297,621,595 GRMZM2G137341 ereb16 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 195,885,970 195,887,098 Zm00001d017592 ereb16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 201,022,603 201,023,298 GRMZM2G171179 ereb160 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 11,535,025 11,537,985 Zm00001d045044 ereb160 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 10,942,420 10,945,088 GRMZM2G021573 ereb161 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 145,136,034 145,140,341 Zm00001d048004 ereb161 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 147,698,120 147,702,310 GRMZM2G059939 ereb162 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 162,767,827 162,769,490 Zm00001d038907 ereb162 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 166,776,865 166,778,085 GRMZM2G022359 ereb163 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 73,140,439 73,143,884 Zm00001d024468 ereb163 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 72,229,235 72,232,453 GRMZM2G093595 ereb164 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 140,882,370 140,883,690 Zm00001d038001 ereb164 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 144,781,755 144,782,501 GRMZM2G317596 ereb165 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 164,875,430 164,876,438 Zm00001d039019 ereb165 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 168,819,645 168,820,517 GRMZM2G478965 ereb166 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 15,838,022 15,839,110 Zm00001d019098 ereb166 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 16,383,295 16,384,383 GRMZM2G050851 ereb167 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 209,401,525 209,403,939 Zm00001d032095 ereb167 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 212,364,322 212,366,865 GRMZM2G039112 ereb168 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 162,442,365 162,444,201 Zm00001d030862 ereb168 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 164,035,614 164,036,858 GRMZM2G016079 ereb169 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 189,807,563 189,808,400 Zm00001d031498 ereb169 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 192,005,744 192,006,331 GRMZM2G029323 ereb17 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 181,088,255 181,090,094 Zm00001d052229 ereb17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 183,995,749 183,996,699 GRMZM2G300924 ereb170 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 146,313,370 146,315,508 Zm00001d051239 ereb170 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 149,655,139 149,656,476 GRMZM2G013657 ereb171 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 143,487,859 143,494,583 Zm00001d038087 ereb171 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 147,379,164 147,385,725 GRMZM2G369472 ereb172 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 199,674,463 199,675,600 Zm00001d031796 ereb172 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 202,103,550 202,104,359 GRMZM2G007406 ereb173 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 141,206,088 141,207,032 Zm00001d047860 ereb173 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 143,638,759 143,639,535 GRMZM2G149756 ereb174 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 175,592,023 175,595,225 Zm00001d042717 ereb174 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 178,106,747 178,109,443 GRMZM2G429378 ereb175 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 17,655,509 17,656,456 Zm00001d045262 ereb175 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 17,416,763 17,417,710 GRMZM2G072926 ereb176 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 152,189,367 152,190,424 Zm00001d051355 ereb176 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 155,723,238 155,723,924 GRMZM2G123119 ereb177 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 52,773,401 52,774,399 Zm00001d019734 ereb177 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 54,535,486 54,536,259 GRMZM2G047999 ereb178 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 166,555,654 166,556,595 Zm00001d016623 ereb178 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 170,440,595 170,441,392 GRMZM2G129674 ereb179 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 17,461,265 17,462,932 Zm00001d027924 ereb179 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 17,775,779 17,777,344 GRMZM2G055204 ereb18 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 208,210,507 208,213,447 Zm00001d018081 ereb18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 213,912,954 213,913,979 GRMZM2G018984 ereb180 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 17,492,641 17,494,645 Zm00001d027925 ereb180 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 17,807,124 17,808,643 AC206951.3_FG016 ereb181 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 17,518,824 17,519,639 Zm00001d027928 ereb181 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 17,833,120 17,833,935 AC206951.3_FG017 ereb182 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 17,525,572 17,526,492 Zm00001d027929 ereb182 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 17,839,868 17,840,788 GRMZM2G458437 ereb183 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 216,615,448 216,616,387 Zm00001d007119 ereb183 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 222,724,965 222,725,855 GRMZM2G028151 ereb184 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 281,700,006 281,703,981 Zm00001d034204 ereb184 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 286,726,372 286,730,435 GRMZM2G028969 ereb185 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 20,720,151 20,721,075 Zm00001d002747 ereb185 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 21,380,521 21,381,279 AC187157.4_FG001 ereb186 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 22,690,444 22,691,545 Zm00001d008872 ereb186 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 23,393,783 23,394,550 GRMZM2G130459 ereb187 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 207,437,058 207,441,313 Zm00001d018050 ereb187 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 213,161,649 213,165,885 GRMZM2G477287 ereb188 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 80,875,824 80,876,762 Zm00001d029679 ereb188 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 82,474,257 82,474,886 GRMZM2G060517 ereb189 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 53,484,637 53,485,245 Zm00001d019744 ereb189 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 55,350,694 55,351,104 GRMZM2G175543 ereb19 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 88,910,388 88,912,086 Zm00001d036536 ereb19 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 91,341,686 91,342,279 GRMZM2G104260 ereb190 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 145,554,185 145,555,089 Zm00001d026486 ereb190 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 146,894,287 146,895,167 GRMZM2G047918 ereb191 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 150,972,392 150,973,390 Zm00001d016262 ereb191 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 154,574,992 154,575,720 GRMZM2G129777 ereb192 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 22,395,049 22,397,063 Zm00001d039989 ereb192 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 21,877,778 21,879,721 GRMZM2G169382 ereb193 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 56,326,099 56,327,373 Zm00001d040651 ereb193 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 56,282,555 56,283,711 GRMZM2G120401 ereb194 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 80,500,107 80,501,402 Zm00001d050948 ereb194 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 133,138,782 133,139,666 GRMZM2G466044 ereb195 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 191,270,861 191,272,390 Zm00001d017462 ereb195 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 196,589,211 196,590,059 GRMZM2G020150 ereb196 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 156,591,969 156,593,826 Zm00001d038585 ereb196 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 160,539,493 160,540,155 GRMZM2G174784 ereb197 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 5,520,018 5,524,385 Zm00001d002075 ereb197 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 5,456,239 5,459,958 GRMZM2G055180 ereb198 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 21,347,526 21,348,862 Zm00001d002762 ereb198 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 21,962,709 21,963,548 GRMZM2G163745 ereb199 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 208,809,359 208,810,072 Zm00001d032077 ereb199 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 211,750,252 211,750,944 GRMZM2G080516 ereb2 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 139,299,146 139,301,101 Zm00001d026191 ereb2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 140,619,551 140,620,363 GRMZM2G025062 ereb200 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 172,771,420 172,772,631 Zm00001d022461 ereb200 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 178,147,095 178,148,306 GRMZM2G384386 ereb201 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 160,094,706 160,096,131 Zm00001d021892 ereb201 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 165,528,436 165,529,362 GRMZM2G148333 ereb202 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 184,209,896 184,212,209 Zm00001d005798 ereb202 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 189,023,745 189,025,630 GRMZM2G104866 ereb203 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 98,042,537 98,044,099 Zm00001d046651 ereb203 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 100,458,973 100,459,869 GRMZM2G438202 ereb205 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 141,249,356 141,251,027 Zm00001d026271 ereb205 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 142,611,393 142,612,061 GRMZM2G366434 ereb206 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 184,337,648 184,342,194 Zm00001d017207 ereb206 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 188,933,076 188,937,726 GRMZM2G156006 ereb207 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 13,761,895 13,762,657 Zm00001d045120 ereb207 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 13,432,181 13,432,923 GRMZM2G160971 ereb208 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 212,582,559 212,584,989 Zm00001d044004 ereb208 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 216,213,660 216,214,559 GRMZM2G089995 ereb209 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 26,450,939 26,451,894 Zm00001d049364 ereb209 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 27,940,728 27,941,339 GRMZM2G175525 ereb21 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 116,699,951 116,700,712 Zm00001d025409 ereb21 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 117,748,319 117,749,080 GRMZM2G125460 ereb210 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 214,344,857 214,345,995 Zm00001d007033 ereb210 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 220,493,755 220,494,609 GRMZM2G138396 ereb211 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 186,957,472 186,958,546 Zm00001d005892 ereb211 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 191,897,839 191,898,630 GRMZM2G076602 ereb212 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 144,777,835 144,780,346 Zm00001d026448 ereb212 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 146,059,085 146,062,110 GRMZM2G006745 ereb22 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 94,530,861 94,534,207 Zm00001d010048 ereb22 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 96,823,511 96,826,858 GRMZM2G069126 ereb23 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 141,170,323 141,171,382 Zm00001d021207 ereb23 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 146,034,693 146,035,409 GRMZM2G086573 ereb24 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 4,666,315 4,671,738 Zm00001d002025 ereb24 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 4,628,845 4,634,985 GRMZM2G119865 ereb25 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 79,717,475 79,718,928 Zm00001d036298 ereb25 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 82,562,696 82,563,229 GRMZM2G317160 ereb26 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 51,014,131 51,020,257 Zm00001d028919 ereb26 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 51,465,066 51,470,982 GRMZM2G084264 ereb27 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 110,073,119 110,074,320 Zm00001d037165 ereb27 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 114,596,733 114,597,452 GRMZM2G544539 ereb28 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 9,217,173 9,219,426 Zm00001d023535 ereb28 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 9,153,462 9,156,390 GRMZM2G132223 ereb29 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 171,190,647 171,191,502 Zm00001d012584 ereb29 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 176,883,525 176,884,022 GRMZM5G842961 ereb30 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 191,829,610 191,830,443 Zm00001d017477 ereb30 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 197,146,884 197,147,717 GRMZM5G852704 ereb31 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 5,877,307 5,878,356 Zm00001d044857 ereb31 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 5,518,177 5,519,226 GRMZM2G139740 ereb32 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 119,105,133 119,105,723 Zm00001d050787 ereb32 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 122,810,261 122,810,842 GRMZM2G073982 ereb33 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 20,121,733 20,123,748 Zm00001d045378 ereb33 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 20,099,934 20,101,949 GRMZM5G846057 ereb34 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 165,687,986 165,689,517 Zm00001d039077 ereb34 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 169,626,430 169,627,293 GRMZM2G415251 ereb35 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 21,678,126 21,679,947 Zm00001d028070 ereb35 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 21,975,168 21,977,063 GRMZM2G069082 ereb36 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 141,162,777 141,163,747 Zm00001d021205 ereb36 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 146,027,044 146,027,784 GRMZM2G322672 ereb37 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 81,797,663 81,800,162 GRMZM2G419901 ereb38 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 15,773,208 15,774,173 Zm00001d027870 ereb38 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 16,005,938 16,006,903 GRMZM2G073047 ereb39 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 76,481,085 76,482,299 Zm00001d046292 ereb39 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 78,537,231 78,537,959 GRMZM2G015281 ereb4 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 37,721,439 37,722,170 Zm00001d028524 ereb4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 38,080,422 38,081,126 GRMZM2G164591 ereb40 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 146,788,916 146,790,031 GRMZM2G146688 ereb41 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 237,250,179 237,253,121 Zm00001d007840 ereb41 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 240,624,534 240,627,667 GRMZM2G020016 ereb42 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 156,579,550 156,581,365 Zm00001d038584 ereb42 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 160,527,296 160,527,928 GRMZM2G399598 ereb43 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 219,318,493 219,323,840 Zm00001d007236 ereb43 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 225,397,842 225,399,820 GRMZM5G806839 ereb44 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 90,116,618 90,117,418 Zm00001d029884 ereb44 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 91,990,667 91,991,467 GRMZM2G067463 ereb45 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 4,352,876 4,353,499 Zm00001d002011 ereb45 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 4,324,615 4,325,127 GRMZM2G085678 ereb46 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 114,131,334 114,133,006 Zm00001d015759 ereb46 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 116,972,852 116,973,938 GRMZM2G174917 ereb47 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 5,568,515 5,570,186 Zm00001d002079 ereb47 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 5,505,054 5,505,812 GRMZM2G376255 ereb48 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 151,134,794 151,135,999 Zm00001d048296 ereb48 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 154,056,208 154,057,131 GRMZM2G159592 ereb49 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 64,222,278 64,223,655 Zm00001d009468 ereb49 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 65,782,410 65,783,537 GRMZM2G048621 ereb5 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 152,103,666 152,104,731 Zm00001d051350 ereb5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 155,610,012 155,610,749 GRMZM2G142179 ereb50 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 2,629,088 2,630,607 Zm00001d039324 ereb50 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 1,876,337 1,877,401 GRMZM2G055070 ereb51 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 71,678,821 71,679,414 Zm00001d024436 ereb51 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 70,790,076 70,790,636 GRMZM2G105266 ereb52 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 170,265,321 170,267,160 Zm00001d042588 ereb52 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 172,856,158 172,857,057 GRMZM2G141638 ereb53 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 166,836,222 166,840,043 Zm00001d042492 ereb53 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 169,433,935 169,438,362 GRMZM2G020054 ereb54 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 65,437,299 65,438,594 Zm00001d024324 ereb54 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 64,620,725 64,621,285 GRMZM2G097081 ereb57 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 176,557,756 176,558,869 Zm00001d052102 ereb57 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 179,564,558 179,565,262 GRMZM2G381441 ereb58 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 300,119,372 300,120,555 Zm00001d034920 ereb58 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 305,637,480 305,638,337 GRMZM5G837876 ereb59 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 13,240,123 13,240,995 GRMZM2G172936 ereb6 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 20,632,553 20,633,410 Zm00001d002744 ereb6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 21,315,391 21,316,053 GRMZM2G131266 ereb60 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 211,370,663 211,373,082 Zm00001d032144 ereb60 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 214,378,154 214,380,573 GRMZM2G475678 ereb61 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 21,187,724 21,188,794 Zm00001d002760 ereb61 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 21,850,071 21,851,141 GRMZM2G011236 ereb62 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 207,364,254 207,365,473 Zm00001d006653 ereb62 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 213,547,650 213,548,585 GRMZM2G307152 ereb63 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 170,466,981 170,467,714 Zm00001d042593 ereb63 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 173,057,147 173,057,683 GRMZM2G171569 ereb64 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 21,160,811 21,162,260 Zm00001d019216 ereb64 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 22,130,022 22,130,944 GRMZM2G124011 ereb65 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 195,135,264 195,136,246 Zm00001d006170 ereb65 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 200,403,153 200,403,895 GRMZM2G041839 ereb66 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 191,904,539 191,906,156 Zm00001d017478 ereb66 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 197,222,832 197,223,605 GRMZM2G114820 ereb67 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 125,166,271 125,168,025 Zm00001d047339 ereb67 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 126,963,041 126,964,782 GRMZM2G368838 ereb68 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 16,555,808 16,557,224 Zm00001d002620 ereb68 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 16,974,028 16,974,666 GRMZM2G085964 ereb69 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 138,751,831 138,753,113 Zm00001d037941 ereb69 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 142,909,977 142,911,255 GRMZM2G173771 ereb7 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 178,620,836 178,621,888 Zm00001d052167 ereb7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 181,560,436 181,561,128 AC213666.3_FG003 ereb70 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 24,212,770 24,213,261 Zm00001d049309 ereb70 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 25,775,470 25,775,961 GRMZM2G113060 ereb71 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 149,648,095 149,649,451 Zm00001d048208 ereb71 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 152,517,945 152,518,838 GRMZM2G135452 ereb72 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 51,805,587 51,806,576 Zm00001d035835 ereb72 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 54,257,239 54,258,228 GRMZM2G060876 ereb73 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 165,849,278 165,850,111 GRMZM2G024871 ereb74 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 31,877,779 31,878,301 Zm00001d014113 ereb74 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 32,981,437 32,981,850 GRMZM2G060249 ereb75 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 165,822,785 165,823,252 GRMZM2G139765 ereb76 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 188,716,605 188,718,676 Zm00001d017366 ereb76 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 193,684,947 193,686,296 GRMZM2G451031 ereb77 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 186,781,331 186,784,258 Zm00001d043116 ereb77 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 189,581,664 189,585,104 GRMZM2G060206 ereb78 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 49,346,413 49,347,038 Zm00001d049903 ereb78 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 51,462,096 51,462,470 GRMZM2G175856 ereb79 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 197,306,494 197,307,177 Zm00001d031728 ereb79 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 199,720,829 199,721,512 GRMZM2G146028 ereb8 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 234,986,414 234,987,698 Zm00001d053707 ereb8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 239,645,670 239,646,296 GRMZM2G151542 ereb80 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 147,672,456 147,674,477 Zm00001d011499 ereb80 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 152,569,157 152,570,068 GRMZM2G416701 ereb81 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 29,008,639 29,012,194 Zm00001d035512 ereb81 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 30,481,710 30,486,777 GRMZM2G019443 ereb82 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 17,154,984 17,156,006 Zm00001d019116 ereb82 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 17,758,679 17,759,647 GRMZM2G132185 ereb83 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 171,200,009 171,201,130 Zm00001d012585 ereb83 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 176,892,933 176,893,658 GRMZM2G481668 ereb84 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 147,998,722 147,999,285 Zm00001d038216 ereb84 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 151,806,188 151,806,748 GRMZM2G040664 ereb86 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 132,343,963 132,345,739 Zm00001d025910 ereb86 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 133,559,160 133,560,374 GRMZM5G805505 ereb87 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 21,231,379 21,232,602 Zm00001d002761 ereb87 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 21,893,444 21,894,391 GRMZM2G018138 ereb88 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 141,464,460 141,465,197 Zm00001d021214 ereb88 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 146,343,053 146,343,709 GRMZM2G156737 ereb89 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 48,661,492 48,662,964 Zm00001d049889 ereb89 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 50,775,492 50,776,550 GRMZM2G323172 ereb9 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 124,705,032 124,709,397 Zm00001d037531 ereb9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 128,390,186 128,395,804 GRMZM2G110333 ereb90 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 212,398,699 212,401,458 Zm00001d018305 ereb90 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 218,213,866 218,216,075 GRMZM2G079825 ereb91 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 63,265,056 63,266,421 Zm00001d003871 ereb91 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 64,226,755 64,227,570 GRMZM2G174347 ereb92 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 120,487,038 120,488,230 Zm00001d000339 ereb92 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73V4_ctg23 49,432 50,133 GRMZM2G066158 ereb93 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 120,401,709 120,402,944 Zm00001d010676 ereb93 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 123,949,136 123,949,753 GRMZM2G363052 ereb94 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 85,662,465 85,665,508 Zm00001d020043 ereb94 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 88,466,229 88,469,073 AC198979.4_FG009 ereb95 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 10,988,032 10,988,424 Zm00001d027687 ereb95 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 11,155,935 11,156,159 GRMZM2G044077 ereb96 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 26,886,791 26,888,388 Zm00001d008968 ereb96 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 27,760,205 27,761,182 GRMZM2G068967 ereb97 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 10,793,567 10,794,323 Zm00001d002364 ereb97 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 10,906,553 10,907,221 GRMZM2G052720 ereb98 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 237,684,792 237,686,205 Zm00001d053859 ereb98 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 242,396,086 242,396,676 GRMZM2G073258 ereb99 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 134,961,620 134,962,623 Zm00001d049058 ereb99 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 14,139,093 14,139,833 GRMZM2G102601 ers14 Chr5 12,230,588 12,235,844 Zm00001d013486 ers14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 12,646,141 12,651,335 GRMZM2G073668 ers25 Chr1 264,657,422 264,662,580 Zm00001d033642 ers25 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 269,395,044 269,400,163 GRMZM2G012012 es1 from alignment with cDNA AF180131 GI:12830540 (MS Ap3 2011) Chr9 126,975,034 126,975,819 Zm00001d047398 es1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 128,745,208 128,745,486 GRMZM2G009359 es2 based on cDNA AF180132 GI:12830542 Chr9 126,170,000 126,170,583 GRMZM2G128301 es2 based on cDNA AF180132 GI:12830542 Chr9 126,256,594 126,257,200 GRMZM2G009359 es3 alignment of cDNA AF180132 GI:12830542 Chr9 126,170,000 126,170,583 GRMZM2G128301 es3 alignment of cDNA AF180132 GI:12830542 Chr9 126,256,594 126,257,200 GRMZM2G009359 es4 from alignment of A188 cDNA AF180134.1 GI:12830546 Chr9 126,170,000 126,170,583 Zm00001d000392 es4 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73V4_ctg41 19,480 19,755 Zm00001d047372 es4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 128,017,173 128,017,448 AC233879.1_FG002 esp1 from: X55388 Chr6 140,536,934 140,537,348 Zm00001d037988 esp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 144,427,562 144,428,509 GRMZM2G162659 esp5 Chr6 140,501,700 140,502,699 Zm00001d037985 esp5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 144,391,967 144,392,983 GRMZM2G046086 esr1 Chr1 14,286,859 14,287,441 Zm00001d027820 esr1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 14,479,050 14,479,445 GRMZM2G315601 esr2 Chr1 14,256,833 14,257,545 Zm00001d027819 esr2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 14,448,014 14,448,412 GRMZM2G140302 esr3 from: X99970 Chr1 14,300,150 14,300,705 Zm00001d027821 esr3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 14,492,187 14,492,564 GRMZM2G048353 esr6 Chr4 210,979,213 210,979,886 Zm00001d053112 esr6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 214,258,440 214,258,980 GRMZM2G157574 et1 Classical Gene Chr3 223,825,954 223,827,718 Zm00001d044415 et1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 227,490,616 227,495,187 GRMZM2G420801 etr2 Chr10 101,173,508 101,177,424 Zm00001d025050 etr2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 101,678,128 101,682,933 GRMZM2G089010 etr40 Chr2 104,591,127 104,595,720 Zm00001d004372 etr40 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 106,904,147 106,908,784 GRMZM2G147687 exg1 from: Entrez Gene 100191390 Chr1 276,371,915 276,377,603 Zm00001d034015 exg1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 281,226,728 281,232,212 GRMZM2G339122 expa1 Classical Gene Chr3 184,419,336 184,421,693 Zm00001d043047 expa1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 187,342,506 187,347,984 GRMZM2G105844 expa2 Chr5 206,888,609 206,890,560 Zm00001d018031 expa2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 212,483,686 212,485,307 GRMZM2G074585 expa3 Chr10 99,487,994 99,489,313 Zm00001d025018 expa3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 99,917,607 99,918,841 GRMZM2G368886 expa4 Chr1 293,705,165 293,708,788 Zm00001d034663 expa4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 299,194,181 299,196,764 GRMZM2G361064 expa5 Chr6 154,325,086 154,327,260 Zm00001d038476 expa5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 158,313,985 158,316,132 GRMZM2G095968 expa6 Chr1 7,353,116 7,355,434 Zm00001d027520 expa6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 7,356,309 7,358,599 GRMZM2G146551 expb1 from: AY197353 Chr9 118,273,115 118,274,521 Zm00001d047146 expb1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 120,060,911 120,062,380 GRMZM2G089699 expb10a Chr9 152,409,062 152,410,472 Zm00001d048384 expb10a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 155,293,350 155,294,431 GRMZM2G007685 expb10c from: AY104999 (chr 3 hit) Chr3 53,557,663 53,558,609 Zm00001d040609 expb10c Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 53,438,352 53,439,161 GRMZM2G164785 expb10d from: DQ525684 Chr3 53,392,404 53,393,425 Zm00001d040608 expb10d Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 53,284,329 53,285,135 GRMZM2G127106 expb11 from: EU961014 Chr5 200,274,645 200,279,681 GRMZM2G021621 expb2 Chr1 91,256,138 91,259,053 Zm00001d029899 expb2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 93,193,094 93,195,786 GRMZM2G474194 expb3 Chr1 1,662,969 1,664,360 Zm00001d027283 expb3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 1,715,993 1,716,949 GRMZM2G154178 expb4 Chr7 41,067,901 41,069,524 Zm00001d019560 expb4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 42,572,171 42,573,747 GRMZM2G013671 expb5 Chr9 116,292,644 116,294,506 Zm00001d047089 expb5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 118,067,914 118,069,999 GRMZM2G176595 expb6 Chr1 91,884,842 91,886,219 Zm00001d029913 expb6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 93,847,218 93,848,525 GRMZM2G342246 expb7 from Cell Genomics Project (Oct 2013) Chr1 91,511,981 91,513,768 Zm00001d029906 expb7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 93,520,069 93,521,826 GRMZM2G013002 expb8 from: AF332181 Chr9 116,265,519 116,268,415 Zm00001d047087 expb8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 118,041,045 118,043,785 GRMZM2G099696 fab1 from: BT040366 Chr10 108,139,878 108,147,684 Zm00001d025201 fab1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 108,840,806 108,848,622 GRMZM2G128971 fad7 from: D63952 Chr9 138,099,701 138,102,875 Zm00001d047743 fad7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 140,447,306 140,450,284 GRMZM2G074401 fad8 from: D63953 Chr1 44,805,347 44,808,260 Zm00001d028742 fad8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 44,975,070 44,978,277 GRMZM2G022558 fae2 from: AJ292770 Chr9 87,869,349 87,871,737 GRMZM2G001663 farl1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 35,738,669 35,743,639 Zm00001d028472 farl1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 35,965,499 35,970,651 GRMZM2G406651 farl10 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 150,316,196 150,320,346 Zm00001d021545 farl10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 155,507,985 155,512,108 GRMZM2G048987 farl11 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 152,856,122 152,861,721 Zm00001d021617 farl11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 158,166,110 158,171,728 GRMZM2G129311 farl12 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 157,771,968 157,777,346 Zm00001d021799 farl12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 163,131,766 163,135,920 GRMZM2G114461 farl13 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 165,506,191 165,510,340 Zm00001d022142 farl13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 171,061,547 171,066,128 GRMZM2G148940 farl14 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 87,667,166 87,669,926 Zm00001d046441 farl14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 89,992,407 89,995,226 GRMZM2G104268 farl15 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 145,543,618 145,550,014 Zm00001d026485 farl15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 146,872,939 146,890,622 GRMZM2G463730 farl2 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 283,389,452 283,396,343 Zm00001d034282 farl2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 288,419,713 288,426,810 GRMZM2G155980 farl3 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 297,376,151 297,380,168 Zm00001d034813 farl3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 302,791,729 302,795,556 GRMZM2G083374 farl4 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 9,771,491 9,806,346 Zm00001d039612 farl4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 9,050,686 9,081,730 GRMZM2G034868 farl5 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 142,975,242 142,986,336 Zm00001d041923 farl5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 143,812,482 143,817,371 GRMZM2G302323 farl6 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 30,795,954 30,799,228 Zm00001d049493 farl6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 32,339,623 32,342,172 GRMZM2G043250 farl7 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 171,564,949 171,567,349 Zm00001d016772 farl7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 175,546,931 175,549,078 GRMZM2G117108 farl8 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 182,810,298 182,816,922 Zm00001d017164 farl8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 187,386,561 187,393,392 GRMZM2G106653 farl9 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 182,948,968 182,952,939 Zm00001d017165 farl9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 187,559,811 187,568,783 GRMZM2G406603 fat1 Chr9 88,263,061 88,268,115 Zm00001d046454 fat1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 90,618,251 90,622,738 GRMZM5G829544 fat2 from Li et al 2011 Chr9 20,595,102 20,599,326 Zm00001d045387 fat2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 20,378,245 20,382,973 GRMZM2G003318 fbn1 Chr1 101,275,701 101,279,519 Zm00001d030074 fbn1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 103,634,381 103,637,965 GRMZM2G481291 fbxl1 Chr9 16,293,425 16,302,009 Zm00001d045205 fbxl1 Chr9 16,041,474 16,043,191 GRMZM2G165836 fcp1 Je et al. 2016 Chr2 39,188,755 39,190,131 GRMZM2G133213 fcr1 Chr3 186,291,885 186,295,766 GRMZM2G157263 fcr2 Chr6 155,408,534 155,412,926 Zm00001d038529 fcr2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 159,350,688 159,355,063 GRMZM5G847530 fdad1 from BT041642 Chr9 26,606,314 26,608,509 Zm00001d045555 fdad1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 26,647,373 26,649,610 GRMZM5G824600 fdh1 Chr5 215,541,812 215,545,867 GRMZM2G423972 fdh2 Chr1 264,221,357 264,225,484 Zm00001d033618 fdh2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 269,003,206 269,006,503 GRMZM2G056407 fdl1 La Rocca et al., 2015 Chr7 167,647,343 167,649,332 Zm00001d022227 fdl1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 173,165,811 173,167,796 GRMZM2G122337 fdx1 Chr6 1,340,417 1,341,388 Zm00001d035001 fdx1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 1,392,078 1,392,530 GRMZM2G048313 fdx2 Chr6 1,373,405 1,374,333 Zm00001d035003 fdx2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 1,425,009 1,425,431 GRMZM2G053458 fdx3 Classical Gene Chr1 296,097,227 296,102,118 GRMZM2G053458 fdx3 Chr1 296,097,227 296,102,118 Zm00001d034760 fdx3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 301,511,660 301,512,118 GRMZM2G122327 fdx5 Chr6 1,343,906 1,345,155 Zm00001d035002 fdx5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 1,395,899 1,396,315 GRMZM2G104925 fea2 Classical Gene Chr4 133,689,783 133,692,271 GRMZM2G104925 fea2 Chr4 133,689,783 133,692,271 Zm00001d051012 fea2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 136,765,871 136,767,712 GRMZM2G166524 fea3 Je et al., 2016 Chr3 29,095,292 29,098,726 Zm00001d040130 fea3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 28,711,131 28,713,722 GRMZM2G133331 fea4 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 116,934,690 116,937,455 Zm00001d037317 fea4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 120,724,112 120,726,773 GRMZM2G121262 fen1 Chr6 161,916,081 161,920,668 GRMZM2G325575 fer1 Classical Gene Chr4 183,760,831 183,763,850 Zm00001d052316 fer1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 186,976,119 186,978,547 GRMZM2G147266 fer2 Classical Gene Chr10 1,279,030 1,283,646 Zm00001d023225 fer2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 826,372 828,398 GRMZM5G869779 fgp2 Li, et al. 2014 Chr1 226,063,076 226,070,426 Zm00001d032529 fgp2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 229,632,719 229,640,091 GRMZM2G036609 fgs1 Classical Gene Chr7 171,002,271 171,021,085 Zm00001d022388 fgs1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 176,589,186 176,606,869 GRMZM2G129243 fha1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 5,741,207 5,746,550 Zm00001d027462 fha1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 5,819,752 5,825,029 AC211652.4_FG002 fha10 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 20,429,258 20,434,163 Zm00001d049225 fha10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 21,651,502 21,656,668 GRMZM2G701297 fha11 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 3,944,081 3,952,303 Zm00001d013060 fha11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 4,053,398 4,061,564 GRMZM2G105822 fha12 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 8,623,516 8,626,712 Zm00001d013342 fha12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 8,966,512 8,968,095 GRMZM2G081221 fha13 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 19,207,810 19,212,507 Zm00001d013765 fha13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 19,660,256 19,664,911 GRMZM2G006246 fha14 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 26,333,085 26,337,585 Zm00001d013976 fha14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 26,945,788 26,950,335 GRMZM2G113156 fha15 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 140,068,111 140,076,698 Zm00001d037971 fha15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 143,885,595 143,894,219 GRMZM2G172021 fha17 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 153,782,357 153,788,188 Zm00001d048454 fha17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 156,673,659 156,679,530 GRMZM2G136344 fha18 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 120,802,689 120,805,284 GRMZM2G424241 fha2 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 193,349,658 193,355,990 Zm00001d031593 fha2 Chr1 195,672,265 195,678,558 GRMZM2G086138 fha3 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 248,377,825 248,386,493 Zm00001d033153 fha3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 252,246,763 252,255,194 GRMZM2G359217 fha4 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 272,641,851 272,643,707 Zm00001d033884 fha4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 277,357,877 277,359,445 GRMZM2G133716 fha6 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 136,740,049 136,745,997 Zm00001d004810 fha6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 140,744,018 140,750,309 GRMZM2G150608 fha7 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 161,415,278 161,423,070 Zm00001d005240 fha7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 165,391,566 165,398,971 GRMZM2G391164 fha8 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 230,519,202 230,523,747 Zm00001d007652 fha8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 236,954,507 236,959,237 GRMZM2G177895 fha9 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 230,599,139 230,600,906 Zm00001d044666 fha9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 234,416,397 234,417,575 GRMZM2G062396 fht1 Classical Gene Chr2 3,561,475 3,563,418 Zm00001d001960 fht1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 3,559,183 3,560,951 GRMZM2G118205 fie1 Classical Gene Chr4 35,790,694 35,796,700 Zm00001d049608 fie1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 37,421,922 37,427,789 GRMZM2G148924 fie2 Classical Gene Chr10 84,106,322 84,110,776 Zm00001d024698 fie2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 83,962,005 83,966,353 GRMZM2G010937 fim1 from Cell Genomics Project Chr4 163,873,554 163,879,688 Zm00001d051688 fim1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 166,783,445 166,789,500 GRMZM2G094532 fl1 alignment of EF536720 to B73_v2 assembly Chr2 41,853,494 41,855,092 Zm00001d003398 fl1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 43,019,871 43,020,779 GRMZM2G397687 fl2 alignment of cDNA AF371274.1 to B73_V2 Chr4 21,334,901 21,335,970 GRMZM2G397687 fl2 Classical Gene Chr4 21,334,901 21,335,970 Zm00001d049243 fl2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 22,579,361 22,580,152 GRMZM2G006585 fl3 Li et al., 2017; assigned by the Grassius project to platz12 (Yilmaz et al 2009) Chr8 51,608,197 51,609,614 Zm00001d009292 fl3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 52,707,946 52,709,109 GRMZM2G353272 fl4 From: Wang et al., 2014 (one member of tandem repeated 19kD alpha zein z1A-1 gene cluster) Chr4 5,539,880 5,541,152 Zm00001d048851 fl4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 6,353,980 6,354,684 GRMZM2G152801 fls1 Falcone-Ferreyra et al., 2012 Chr5 210,204,906 210,206,387 Zm00001d018184 fls1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 215,975,576 215,976,694 GRMZM2G069298 fls2 Falcone-Ferreyra et al., 2012 Chr5 210,154,373 210,155,706 Zm00001d018181 fls2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 215,925,493 215,926,588 GRMZM2G058760 fnr1 Chr1 285,208,091 285,211,692 GRMZM2G058760 fnr2 Chr1 285,208,091 285,211,692 Zm00001d034345 fnr2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 290,272,584 290,276,056 GRMZM2G167336 fns1 Rius et al., 2016 Chr9 128,676,962 128,678,835 Zm00001d047452 fns1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 130,652,403 130,653,974 GRMZM2G099467 fnsi1 Falcone Ferreyra et al., 2015 Chr1 83,410,152 83,414,307 Zm00001d029744 fnsi1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 85,068,069 85,072,051 GRMZM2G475380 fnsi2 Falcone Ferreyra et al., 2015 Chr1 4,760,983 4,765,716 Zm00001d027423 fnsi2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 4,909,652 4,914,685 GRMZM2G148441 fnsii1 Morohashi et al., 2012 Chr10 96,108,546 96,110,569 Zm00001d024946 fnsii1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 96,325,810 96,327,827 GRMZM2G108767 fpox1 Chr7 165,719,833 165,723,658 Zm00001d022148 fpox1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 171,253,896 171,257,994 GRMZM2G168681 fps1 Classical Gene Chr8 62,786,955 62,791,232 GRMZM2G168681 fps1 Chr8 62,786,955 62,791,232 Zm00001d009431 fps1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 64,107,616 64,111,865 GRMZM2G147721 fps2 from Richter et al 2015 Chr8 153,104,841 153,108,971 Zm00001d011673 fps2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 158,269,867 158,274,000 GRMZM2G098569 fps3 from Richter et al 2015 Chr3 205,218,174 205,222,694 Zm00001d043727 fps3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 208,452,423 208,456,825 GRMZM2G086845 frk1 Chr3 168,566,367 168,569,728 Zm00001d042536 frk1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 171,065,302 171,068,300 GRMZM2G068557 fro2 Chr2 46,785,444 46,790,374 Zm00001d003559 fro2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 48,066,763 48,071,352 GRMZM2G392863 fsgt1 Chr1 6,802,700 6,803,523 Zm00001d027500 fsgt1 Chr1 6,797,799 6,798,604 GRMZM2G001904 ftcl1 Guan et al., 2014 Chr10 9,142,799 9,147,733 Zm00001d023534 ftcl1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 9,078,177 9,084,700 GRMZM2G122793 ftr1 Chr9 9,969,973 9,974,729 Zm00001d045366 ftr1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 19,826,408 19,831,154 GRMZM2G062210 fus6 Chr1 3,548,036 3,558,270 Zm00001d027359 fus6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 3,651,033 3,661,251 GRMZM2G087804 g2 Classical Gene Chr3 1,464,299 1,469,099 GRMZM2G087804 g2 Chr3 1,464,299 1,469,099 Zm00001d039260 g2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 750,258 754,984 GRMZM2G167673 ga16,17ox1 Nelissen, et al. (2012) Chr6 155,034,889 155,036,270 Zm00001d038511 ga16,17ox1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 158,957,756 158,969,636 AC203966.5_FG005 ga20ox1 from: NM_001112453 Chr1 299,607,382 299,608,497 Zm00001d034898 ga20ox1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 305,074,531 305,075,830 GRMZM2G021051 ga20ox2 from: NM_001143386 Chr2 234,425,722 234,427,421 Zm00001d007894 ga20ox2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 241,897,454 241,898,638 GRMZM2G368411 ga20ox3 Nelissen, et al. (2012) Chr3 170,942,901 170,945,698 Zm00001d042611 ga20ox3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 173,559,174 173,562,022 GRMZM2G060940 ga20ox4 from: NM_001156071 Chr5 18,192,142 18,193,721 Zm00001d013725 ga20ox4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 18,631,981 18,633,840 GRMZM2G049418 ga20ox5 Nelissen, et al. (2012) Chr8 164,487,836 164,490,694 Zm00001d012212 ga20ox5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 170,115,789 170,118,570 GRMZM2G078798 ga2ox1 from Bolduc et al 2012 Chr6 126,063,717 126,069,395 Zm00001d037565 ga2ox1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 129,802,297 129,807,428 GRMZM2G031724 ga2ox10 Nelissen, et al. (2012) Chr8 173,402,117 173,404,386 Zm00001d012712 ga2ox10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 179,086,672 179,088,998 GRMZM2G127757 ga2ox11 Nelissen, et al. (2012) Chr6 158,703,759 158,705,083 GRMZM2G177104 ga2ox12 Nelissen, et al. (2012) Chr7 725,316 726,416 Zm00001d018617 ga2ox12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 1,105,512 1,106,576 GRMZM2G031432 ga2ox13 Nelissen, et al. (2012) Chr3 3,994,138 3,996,082 Zm00001d039394 ga2ox13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 3,274,307 3,276,532 GRMZM2G006964 ga2ox2 from: NM_001154780 Chr2 28,389,255 28,392,075 Zm00001d002999 ga2ox2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 29,175,293 29,178,113 GRMZM2G022679 ga2ox3 from: FL100324 Chr3 196,126,846 196,128,900 Zm00001d043411 ga2ox3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 199,019,233 199,021,284 GRMZM2G153359 ga2ox4 from: EC858802 Chr5 187,018,204 187,022,091 Zm00001d017294 ga2ox4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 192,007,580 192,011,428 GRMZM2G176963 ga2ox5 Nelissen, et al. (2012) Chr3 60,943,471 60,951,573 Zm00001d040737 ga2ox5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 60,952,847 60,960,982 GRMZM2G051619 ga2ox6 Chr6 131,338,805 131,342,645 Zm00001d037724 ga2ox6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 135,240,118 135,243,717 GRMZM2G427618 ga2ox7 from: NM_001154796 Chr6 158,703,023 158,704,867 Zm00001d038695 ga2ox7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 162,656,616 162,658,442 GRMZM2G155686 ga2ox8 from: NM_001137734 Chr6 164,507,675 164,509,560 Zm00001d038996 ga2ox8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 168,446,326 168,448,293 GRMZM2G152354 ga2ox9 from: NM_001157265 Chr8 23,992,337 23,994,920 Zm00001d008909 ga2ox9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 24,852,743 24,855,080 GRMZM2G044358 ga3ox1 from: JX307639 Chr6 128,498,080 128,499,807 Zm00001d037627 ga3ox1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 132,317,697 132,319,277 GRMZM2G073725 gap1 from: U89897 Chr1 248,922,560 248,925,400 Zm00001d033174 gap1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 252,797,116 252,799,804 GRMZM2G061695 gar1 Chr3 219,494,801 219,498,659 Zm00001d044254 gar1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 223,085,735 223,089,594 GRMZM2G429000 gar2 from EU952874 Chr10 138,833,997 138,835,213 Zm00001d026160 gar2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 140,066,627 140,067,028 GRMZM2G142705 gar3 from: AB018589 Chr8 138,985,268 138,986,891 Zm00001d011225 gar3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 143,689,328 143,691,031 GRMZM2G025002 gata1 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 149,357,261 149,359,087 Zm00001d005005 gata1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 153,300,918 153,302,288 GRMZM2G532534 gata10 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 152,533,064 152,538,147 Zm00001d048391 gata10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 155,410,694 155,411,701 GRMZM2G404973 gata11 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 22,692,870 22,695,229 AC194965.4_FG004 gata12 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 127,629,032 127,630,234 Zm00001d037605 gata12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 131,419,763 131,421,563 GRMZM2G044576 gata13 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 174,313,923 174,315,776 Zm00001d012757 gata13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 180,032,642 180,034,434 GRMZM5G879778 gata14 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 239,234,358 239,235,044 GRMZM2G031983 gata15 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 155,457,609 155,459,172 Zm00001d016361 gata15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 159,219,012 159,221,123 GRMZM2G113098 gata16 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 90,962,372 90,964,067 Zm00001d029896 gata16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 92,897,029 92,898,887 GRMZM2G138967 gata17 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 155,999,788 156,001,252 Zm00001d011771 gata17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 161,288,497 161,289,891 GRMZM2G114775 gata18 Chr1 295,848,928 295,850,422 Zm00001d034751 gata18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 301,301,000 301,302,433 GRMZM2G421212 gata19 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 134,118,624 134,123,159 Zm00001d025988 gata19 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 135,344,276 135,347,905 GRMZM2G104390 gata2 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 40,841,370 40,843,380 Zm00001d009193 gata2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 42,033,253 42,035,233 GRMZM5G887975 gata21 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 71,168,700 71,169,448 Zm00001d009604 gata21 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 72,785,057 72,785,843 AC184831.3_FG005 gata22 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 239,028,639 239,029,484 Zm00001d053940 gata22 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 243,894,205 243,896,498 GRMZM2G110295 gata23 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 286,470,199 286,472,456 GRMZM2G163200 gata24 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 214,574,879 214,580,853 Zm00001d018421 gata24 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 220,398,106 220,404,278 AC202864.3_FG002 gata25 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 160,741,348 160,742,841 Zm00001d038801 gata25 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 164,734,361 164,736,397 GRMZM2G397616 gata26 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 73,412,731 73,413,812 Zm00001d009668 gata26 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 75,139,891 75,141,593 GRMZM2G052616 gata27 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 64,821,137 64,823,713 Zm00001d040775 gata27 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 64,946,021 64,948,546 GRMZM2G101058 gata28 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 115,980,192 115,982,001 Zm00001d047081 gata28 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 117,752,835 117,754,586 GRMZM2G039586 gata29 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 81,178,852 81,181,039 Zm00001d046354 gata29 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 83,394,090 83,396,208 GRMZM2G140669 gata3 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 190,024,321 190,026,323 Zm00001d017409 gata3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 195,097,522 195,099,545 GRMZM2G464037 gata30 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 186,548,299 186,549,717 Zm00001d052431 gata30 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 189,828,211 189,829,629 GRMZM2G067171 gata31 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 141,471,190 141,473,058 Zm00001d041883 gata31 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 142,276,945 142,278,755 GRMZM2G135381 gata32 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 123,887,193 123,889,333 Zm00001d010785 gata32 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 127,752,529 127,754,303 GRMZM2G048850 gata33 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 9,477,435 9,478,816 Zm00001d023540 gata33 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 9,446,733 9,447,398 GRMZM2G396451 gata34 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 274,561,455 274,577,750 Zm00001d033945 gata34 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 279,348,660 279,365,014 GRMZM2G123909 gata35 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 211,762,877 211,763,862 Zm00001d043969 gata35 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 215,346,971 215,347,825 AC184831.3_FG008 gata36 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 239,100,691 239,101,536 GRMZM2G379005 gata4 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 172,789,633 172,794,795 Zm00001d051981 gata4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 175,840,987 175,846,170 GRMZM2G077002 gata5 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 22,022,637 22,026,411 Zm00001d002790 gata5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 22,704,567 22,708,332 GRMZM2G054615 gata6 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 133,391,911 133,394,043 Zm00001d025953 gata6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 134,612,927 134,615,457 GRMZM2G118214 gata7 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 9,409,405 9,411,344 Zm00001d023539 gata7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 9,373,447 9,375,293 GRMZM2G324131 gata8 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 9,535,048 9,537,066 Zm00001d023541 gata8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 9,501,110 9,503,125 GRMZM2G009530 gata9 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 177,060,036 177,061,909 Zm00001d031135 gata9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 179,005,355 179,009,556 GRMZM2G011932 gbf1 assigned by the Grassius project, (Yilmaz et al 2009) to bzip18 Chr6 165,543,429 165,548,373 Zm00001d039065 gbf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 169,491,185 169,496,107 GRMZM2G131939 gbp1 Chr1 300,951,400 300,963,846 Zm00001d034949 gbp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 306,490,318 306,502,810 GRMZM2G045314 gbp2 Chr1 258,058,680 258,065,662 Zm00001d033422 gbp2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 262,592,398 262,598,732 GRMZM2G392516 gbptf1 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 19,962,225 19,966,288 Zm00001d035224 gbptf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 14,927,596 14,930,694 GRMZM2G008558 gbptf10 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 109,773,723 109,788,339 Zm00001d037158 gbptf10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 114,233,341 114,234,231 GRMZM2G006871 gbptf11 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 94,066,876 94,068,249 Zm00001d024905 gbptf11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 94,232,837 94,233,649 GRMZM2G082318 gbptf12 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 168,446,968 168,448,568 Zm00001d022266 gbptf12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 173,958,884 173,960,008 GRMZM2G155252 gbptf13 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 21,463,521 21,465,358 Zm00001d035295 gbptf13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 19,729,794 19,731,113 GRMZM2G125239 gbptf14 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 221,138,448 221,144,193 GRMZM2G036966 gbptf15 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 18,918,022 18,924,439 Zm00001d035234 gbptf15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 15,908,223 15,911,138 GRMZM2G174240 gbptf16 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 210,638,738 210,640,244 Zm00001d018198 gbptf16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 216,319,722 216,320,618 GRMZM2G083886 gbptf17 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 210,800,522 210,802,083 Zm00001d018208 gbptf17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 216,608,861 216,609,928 GRMZM2G026417 gbptf18 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 64,021,150 64,022,771 Zm00001d029287 gbptf18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 64,853,687 64,854,838 GRMZM5G868875 gbptf19 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 5,211,419 5,213,711 Zm00001d013138 gbptf19 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 5,339,098 5,339,871 GRMZM2G065506 gbptf2 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 131,400,636 131,401,747 GRMZM2G423292 gbptf20 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 55,782,767 55,784,875 Zm00001d049991 gbptf20 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 58,070,649 58,072,019 EF517601.1_FG010 gbptf21 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 34,497,929 34,499,128 Zm00001d040254 gbptf21 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 34,201,668 34,202,867 GRMZM2G041818 gbptf3 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 267,056,816 267,058,352 Zm00001d033706 gbptf3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 271,804,516 271,808,051 GRMZM2G066373 gbptf4 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 8,465,318 8,474,373 Zm00001d044953 gbptf4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 8,154,859 8,155,761 GRMZM2G162405 gbptf5 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 11,602,126 11,603,804 Zm00001d013451 gbptf5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 11,953,659 11,957,891 GRMZM2G075122 gbptf6 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 213,839,868 213,841,452 Zm00001d006945 gbptf6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 219,975,248 219,976,357 GRMZM2G092409 gbptf7 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 124,438,515 124,440,381 Zm00001d020688 gbptf7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 128,444,311 128,445,856 GRMZM2G134866 gbptf8 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 186,232,100 186,234,162 Zm00001d005865 gbptf8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 191,165,955 191,167,271 GRMZM2G030458 gbptf9 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 127,611,740 127,613,300 Zm00001d047421 gbptf9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 129,533,221 129,534,348 GRMZM2G008263 gbss1b from: EF471312 Chr7 34,885,173 34,892,432 Zm00001d019479 gbss1b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 36,171,251 36,178,389 GRMZM2G412911 gcs1 Chr2 221,734,091 221,744,424 GRMZM2G399183 gcsh1 Chr10 15,804,790 15,806,176 Zm00001d023699 gcsh1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 16,081,385 16,082,904 GRMZM2G104310 gdcp1 Chr10 5,874,253 5,880,613 Zm00001d023437 gdcp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 5,599,455 5,606,101 GRMZM2G178415 gdh1 Classical Gene Chr1 287,360,596 287,367,735 Zm00001d034420 gdh1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 292,477,033 292,483,300 GRMZM2G427097 gdh2 Chr10 134,077,909 134,082,362 Zm00001d025984 gdh2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 135,302,916 135,307,138 GRMZM2G065585 geb1 Christensen et al., 2015 Chr3 152,010,337 152,011,716 Zm00001d042143 geb1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 153,385,868 153,387,244 GRMZM2G046101 geb7 Chr1 258,105,155 258,107,917 Zm00001d033423 geb7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 262,653,205 262,655,634 GRMZM2G005849 gfa1 from: BT036425 Chr3 230,088,470 230,094,105 GRMZM2G105644 ggh1 Owens et al., 2014 Chr5 206,940,311 206,942,851 Zm00001d018034 ggh1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 212,543,656 212,546,035 GRMZM2G419111 ggh2 Owens et al., 2014 Chr3 40,062,815 40,065,077 Zm00001d040356 ggh2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 39,647,289 39,648,626 AC194970.5_FG001 ggps1 From homology to Genbank sequence Chr2 207,900,564 207,901,904 Zm00001d006678 ggps1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 214,097,373 214,099,059 GRMZM2G102550 ggps2 From homology to Genbank sequence Chr7 160,571,102 160,573,151 Zm00001d021929 ggps2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 166,016,446 166,018,185 GRMZM2G058404 ggps3 From homology to Genbank sequence Chr8 6,359,238 6,360,557 Zm00001d008370 ggps3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 6,617,307 6,618,398 GRMZM2G005909 ggps4 From homology to Genbank sequence Chr5 193,709,210 193,710,641 Zm00001d017540 ggps4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 199,061,996 199,063,027 GRMZM2G107101 gi1 Frank Harmon, pers comm Chr8 21,104,080 21,112,365 Zm00001d008826 gi1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 21,787,238 21,795,721 GRMZM5G844173 gi2 Frank Harmon, pers comm Chr3 9,306,265 9,317,285 Zm00001d039589 gi2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 8,521,898 8,533,430 GRMZM2G180246 gif1 Nelissen et al., 2015 Chr1 273,393,236 273,396,891 Zm00001d033905 gif1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 278,134,999 278,138,569 GRMZM2G154169 gif2 Chr4 5,380,348 5,385,430 Zm00001d048833 gif2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 6,134,868 6,138,876 Zm00001d023767 gif3 v4 Chr10 19,457,326 19,463,711 GRMZM2G114642 gl1 Classical Gene Chr7 118,550,916 118,556,690 Zm00001d020557 gl1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 122,228,805 122,234,943 GRMZM2G118243 gl13 Li et al., 2013 Chr3 10,276,457 10,286,585 Zm00001d039631 gl13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 9,567,326 9,577,428 GRMZM2G160730 gl15 Classical Gene Chr9 96,744,684 96,748,035 Zm00001d046621 gl15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 99,138,564 99,141,663 GRMZM2G098239 gl2 Classical Gene Chr2 10,630,672 10,633,711 Zm00001d002353 gl2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 10,743,536 10,746,206 GRMZM2G162434 gl3 Liu et al., 2012 Chr4 185,828,677 185,830,259 Zm00001d052397 gl3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 189,105,110 189,106,135 AC205703.4_FG006 gl8 Classical Gene Chr5 181,248,005 181,251,026 Zm00001d017111 gl8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 185,769,105 185,772,037 GRMZM2G087323 gl8b from: BT066740 Chr4 132,787,074 132,790,535 Zm00001d050992 gl8b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 135,837,972 135,841,317 GRMZM2G473711 gla3 Chr5 7,263,570 7,266,166 Zm00001d013269 gla3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 7,519,465 7,521,714 GRMZM2G067919 glb1 Classical Gene Chr1 258,423,143 258,426,448 Zm00001d033447 glb1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 262,991,884 262,994,316 GRMZM2G026703 glb2 Classical Gene Chr1 287,133,859 287,135,934 Zm00001d034413 glb2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 292,247,305 292,249,329 GRMZM2G410134 glb3 from Maize Cell Genomics Project (Oct 2013) Chr6 156,729,182 156,730,333 Zm00001d038597 glb3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 160,677,919 160,678,539 GRMZM2G153704 glct1 from: BT040792 Chr8 12,789,263 12,803,873 Zm00001d008567 glct1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 13,146,141 13,153,362 GRMZM2G469969 gldh1 alignment of B73_v2 to cDNA AY109467 (Mar 2013 MS) Chr2 146,649,171 146,653,569 Zm00001d004956 gldh1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 150,578,240 150,597,318 GRMZM2G026833 glk1 from AF318580 Chr9 2,711,604 2,714,038 Zm00001d044785 glk1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 2,407,990 2,410,336 GRMZM2G083472 glk10 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 58,165,088 58,167,724 GRMZM2G064197 glk101 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 83,167,441 83,173,051 Zm00001d020019 glk101 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 86,094,098 86,099,698 AC233960.1_FG003 glk11 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 200,029,375 200,031,847 Zm00001d017726 glk11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 205,300,454 205,303,606 GRMZM2G401835 glk12 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 98,583,806 98,586,467 Zm00001d036802 glk12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 101,302,742 101,304,618 GRMZM2G348238 glk14 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 10,524,574 10,526,809 Zm00001d039637 glk14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 9,819,488 9,821,687 GRMZM2G162409 glk15 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 39,518,700 39,524,889 Zm00001d019536 glk15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 40,980,861 40,986,910 GRMZM2G035370 glk16 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 3,109,831 3,112,898 Zm00001d001936 glk16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 3,114,134 3,117,099 GRMZM2G006477 glk17 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 54,344,216 54,350,977 Zm00001d029020 glk17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 55,053,507 55,060,129 GRMZM2G010920 glk18 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 77,781,452 77,784,526 Zm00001d015226 glk18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 80,066,943 80,069,666 GRMZM2G396825 glk19 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 55,169,832 55,172,779 Zm00001d040630 glk19 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 55,088,527 55,091,474 GRMZM2G333083 glk2 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 61,962,138 61,964,866 Zm00001d046174 glk2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 69,209,057 69,211,639 GRMZM2G106185 glk20 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 194,303,751 194,306,883 Zm00001d017563 glk20 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 199,683,772 199,686,910 GRMZM2G315506 glk22 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 31,335,510 31,339,291 Zm00001d049511 glk22 Chr4 32,889,820 32,894,110 GRMZM2G039074 glk23 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 254,304,178 254,313,183 Zm00001d033310 glk23 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 258,515,868 258,524,876 GRMZM2G060485 glk24 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 93,274,325 93,277,370 Zm00001d015521 glk24 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 95,621,404 95,625,832 AC234155.1_FG002 glk25 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 119,108,477 119,111,419 Zm00001d010634 glk25 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 122,651,175 122,654,847 GRMZM2G009060 glk26 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 52,392,455 52,394,837 Zm00001d028984 glk26 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 53,531,029 53,533,986 GRMZM2G173882 glk27 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 237,012,379 237,014,288 Zm00001d007962 glk27 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 244,254,163 244,256,107 GRMZM2G100176 glk28 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 2,630,972 2,634,436 GRMZM2G070865 glk29 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 158,095,257 158,100,338 Zm00001d051527 glk29 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 161,520,154 161,525,256 GRMZM2G471600 glk3 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 104,345,279 104,346,616 Zm00001d010280 glk3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 107,186,649 107,187,548 GRMZM2G374986 glk30 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 153,719,210 153,723,103 Zm00001d048448 glk30 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 156,609,608 156,610,275 GRMZM2G100709 glk31 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 93,393,018 93,401,220 Zm00001d036638 glk31 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 95,883,200 95,891,164 GRMZM2G454449 glk32 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 111,271,909 111,274,197 Zm00001d046981 glk32 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 114,152,611 114,155,554 AC219020.4_FG002 glk33 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 105,920,220 105,922,516 Zm00001d037015 glk33 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 109,124,594 109,127,083 GRMZM2G081671 glk34 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 109,631,596 109,634,230 Zm00001d046947 glk34 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 112,272,641 112,275,279 GRMZM5G846506 glk35 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 153,730,130 153,732,080 Zm00001d005087 glk35 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 157,736,007 157,737,776 GRMZM2G125704 glk36 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 12,354,844 12,357,846 Zm00001d002439 glk36 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 12,647,395 12,650,397 GRMZM2G069525 glk37 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 17,494,663 17,498,413 Zm00001d002649 glk37 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 18,092,188 18,095,739 GRMZM2G113742 glk38 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 221,627,183 221,637,379 Zm00001d032384 glk38 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 224,850,672 224,860,595 GRMZM2G477238 glk39 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 145,144,168 145,146,397 Zm00001d016175 glk39 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 148,523,498 148,526,256 GRMZM2G159119 glk4 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 5,125,137 5,127,242 Zm00001d023402 glk4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 4,740,647 4,742,679 GRMZM2G090230 glk41 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 137,379,294 137,383,113 Zm00001d026106 glk41 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 138,569,154 138,572,986 GRMZM2G370425 glk42 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 114,449,322 114,452,475 Zm00001d041376 glk42 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 114,786,221 114,787,925 GRMZM2G701218 glk43 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 155,372,479 155,375,684 Zm00001d038527 glk43 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 159,314,690 159,317,806 GRMZM2G124540 glk44 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 280,284,828 280,286,869 Zm00001d034160 glk44 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 285,335,178 285,337,132 GRMZM2G379656 glk45 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 234,479,845 234,481,852 Zm00001d032784 glk45 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 238,041,004 238,043,016 GRMZM2G060834 glk47 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 199,338,568 199,343,584 Zm00001d017702 glk47 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 204,630,766 204,635,304 GRMZM5G887276 glk48 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 6,525,346 6,530,541 Zm00001d027492 glk48 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 6,524,381 6,529,577 GRMZM2G168002 glk49 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 83,222,890 83,225,112 Zm00001d050404 glk49 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 86,263,641 86,265,848 GRMZM2G016370 glk5 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 5,388,541 5,390,606 Zm00001d023411 glk5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 5,023,685 5,025,660 GRMZM2G034563 glk50 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 165,151,519 165,153,474 Zm00001d030911 glk50 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 166,811,332 166,812,308 GRMZM2G398055 glk51 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 147,216,522 147,218,561 Zm00001d038191 glk51 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 151,070,539 151,071,477 GRMZM2G124495 glk52 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 146,575,608 146,578,425 Zm00001d026542 glk52 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 147,942,412 147,945,498 GRMZM2G052544 glk53 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 86,297,888 86,301,099 Zm00001d015407 glk53 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 88,561,896 88,565,000 GRMZM2G074908 glk54 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 180,310,733 180,312,482 Zm00001d042892 glk54 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 183,117,455 183,119,171 GRMZM2G123308 glk55 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 77,348,006 77,352,823 Zm00001d024532 glk55 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 76,729,754 76,734,531 GRMZM2G067702 glk56 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 156,260,024 156,261,399 Zm00001d011785 glk56 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 161,545,498 161,546,157 GRMZM2G117854 glk58 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 155,715,032 155,718,706 Zm00001d038546 glk58 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 159,661,656 159,665,659 AC155434.2_FG005 glk59 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 173,860,841 173,863,018 Zm00001d022526 glk59 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 179,348,954 179,352,026 GRMZM2G117193 glk6 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 213,277,645 213,280,082 Zm00001d032190 glk6 Chr1 216,310,588 216,316,345 GRMZM2G173943 glk7 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 83,291,537 83,295,947 Zm00001d020020 glk7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 86,219,721 86,224,081 GRMZM2G171468 glk8 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 6,146,192 6,148,391 Zm00001d013202 glk8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 6,405,099 6,407,194 AC234520.1_FG003 glk9 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 164,385,468 164,386,298 Zm00001d030891 glk9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 166,009,842 166,012,367 GRMZM2G098290 gln1 Classical Gene Chr10 145,900,776 145,906,241 Zm00001d026501 gln1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 147,240,629 147,249,381 GRMZM2G024104 gln2 Classical Gene Chr1 267,960,169 267,963,551 Zm00001d033747 gln2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 272,704,775 272,707,957 GRMZM2G046601 gln3 Classical Gene Chr9 146,319,631 146,327,940 GRMZM2G050514 gln3 Classical Gene Chr1 27,978,351 27,982,007 Zm00001d028260 gln3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 28,169,233 28,171,917 Zm00001d048050 gln3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 148,903,155 148,910,943 GRMZM5G872068 gln4 Classical Gene Chr5 205,293,914 205,297,428 Zm00001d017958 gln4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 210,867,625 210,871,221 GRMZM2G036464 gln5 Classical Gene Chr4 167,111,248 167,114,579 Zm00001d051804 gln5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 170,036,696 170,039,992 GRMZM2G050514 gln6 Classical Gene Chr1 27,978,351 27,982,007 GRMZM2G064096 glp1 from: EU958158 Chr6 123,959,994 123,961,169 Zm00001d037513 glp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 127,667,045 127,667,683 GRMZM2G016890 glu1 Classical Gene Chr10 34,240,659 34,246,077 Zm00001d023994 glu1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 35,174,831 35,179,918 GRMZM2G008247 glu2 Classical Gene Chr10 37,762,909 37,767,713 Zm00001d024037 glu2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 38,844,199 38,849,055 GRMZM2G014844 glu3 from: EU957786 Chr10 34,733,949 34,737,952 Zm00001d024000 glu3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 35,675,292 35,679,293 GRMZM2G181192 glx1 from: AY241545 Chr10 60,090,336 60,096,837 Zm00001d024245 glx1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 59,264,330 59,271,577 GRMZM2G078143 gly1 from EU962459 Chr4 20,795,669 20,799,891 Zm00001d049234 gly1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 22,022,728 22,027,004 GRMZM2G452178 gn1 Classical Gene Chr2 237,298,075 237,304,344 Zm00001d007842 gn1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 240,672,864 240,679,141 GRMZM2G129246 go1 Chr7 5,528,435 5,532,236 Zm00001d018810 go1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 5,842,587 5,845,546 GRMZM2G080079 gol1 Classical Gene Chr4 182,134,219 182,136,764 Zm00001d052268 gol1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 185,307,585 185,310,033 GRMZM2G165919 gols1 Chr1 51,531,588 51,533,796 Zm00001d028931 gols1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 51,977,839 51,979,551 GRMZM5G872256 gols3 Chr9 134,152,466 134,154,240 Zm00001d047582 gols3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 136,350,922 136,352,658 GRMZM2G113414 gos1 Chr3 189,403,504 189,406,550 Zm00001d043217 gos1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 192,241,636 192,243,077 GRMZM2G094712 got1 from B73_V2 Chr3 195,377,312 195,383,470 Zm00001d043382 got1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 198,283,208 198,288,738 GRMZM5G836910 got2 Classical Gene Chr5 213,953,336 213,958,271 Zm00001d018386 got2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 219,773,951 219,778,845 GRMZM2G146677 got3 from alignment of B73)V2 to sequence BT016777.1 Chr5 146,880,878 146,886,034 Zm00001d016198 got3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 150,300,976 150,305,724 GRMZM2G400604 got4 from CornCyc 4.0 and Gramene (2014) Arabidopsis Orthlog Chr3 174,411,027 174,414,395 Zm00001d042685 got4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 176,827,382 176,830,753 GRMZM2G033799 got5 from Tausta et al 2014 Chr8 100,920,138 100,924,873 Zm00001d010190 got5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 103,456,053 103,460,657 GRMZM2G337113 gpa1 Classical Gene Chr2 42,886,006 42,888,042 Zm00001d003429 gpa1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 44,100,341 44,102,181 GRMZM2G083195 gpat1 from: EU962835 Chr3 178,232,720 178,236,298 Zm00001d042813 gpat1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 181,000,679 181,003,338 GRMZM5G845611 gpb1 from EU956029 Chr1 6,404,117 6,406,779 Zm00001d027488 gpb1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 6,407,153 6,409,815 GRMZM2G046804 gpc1 Classical Gene Chr4 36,912,994 36,917,779 Zm00001d049641 gpc1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 38,551,544 38,555,126 GRMZM2G180625 gpc2 Classical Gene Chr6 6,901,483 6,906,034 Zm00001d035156 gpc2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 7,238,033 7,242,155 GRMZM2G071630 gpc3 Classical Gene Chr4 133,130,993 133,134,382 Zm00001d051001 gpc3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 136,187,079 136,190,530 GRMZM2G176307 gpc4 from: BT042907 Chr5 181,570,933 181,575,725 Zm00001d017121 gpc4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 186,104,976 186,109,690 GRMZM2G130230 gpdh1 Chr2 37,085,168 37,093,582 Zm00001d003252 gpdh1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 37,956,894 37,965,162 GRMZM2G094742 gpm4 Chr1 177,072,656 177,077,812 Zm00001d031132 gpm4 Chr1 178,992,773 178,997,888 GRMZM2G174738 gpm46 from aligment to BT016800 [Fig 1 Kirchberger et al 2007) Chr9 85,075,052 85,078,713 Zm00001d046400 gpm46 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 87,391,092 87,394,703 GRMZM2G119411 gpm6 Chr9 25,726,920 25,741,443 Zm00001d045534 gpm6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 25,743,368 25,757,898 GRMZM2G031981 gpm7 Chr2 13,838,928 13,861,148 Zm00001d002501 gpm7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 14,135,350 14,155,809 GRMZM2G016622 gpm930 Chr7 38,037,621 38,039,486 GRMZM2G035268 gpn1 Chr4 84,132,782 84,137,970 Zm00001d050428 gpn1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 87,289,139 87,294,301 GRMZM2G180720 gpt1 from: AF020813 Chr10 58,309,702 58,313,911 Zm00001d000021 gpt1 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73V4_ctg150 1,459,856 1,464,045 GRMZM2G098784 gras1 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 140,092,351 140,096,097 Zm00001d047813 gras1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 142,473,442 142,477,283 GRMZM2G110579 gras10 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 192,899,281 192,902,025 Zm00001d017513 gras10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 198,244,236 198,246,356 GRMZM2G097456 gras11 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 162,247,332 162,249,303 Zm00001d021998 gras11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 167,723,761 167,725,131 GRMZM5G826526 gras12 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 214,641,511 214,642,665 GRMZM2G140094 gras13 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 187,219,736 187,222,248 Zm00001d052464 gras13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 190,503,131 190,505,583 GRMZM2G070371 gras14 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 231,610,740 231,612,552 Zm00001d007713 gras14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 237,959,528 237,961,327 GRMZM5G874545 gras15 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 232,137,122 232,158,937 GRMZM2G335814 gras16 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 248,734,599 248,737,101 Zm00001d033166 gras16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 252,616,117 252,618,315 GRMZM2G143433 gras17 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 120,520,869 120,522,119 Zm00001d015815 gras17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 123,354,228 123,355,478 GRMZM2G011947 gras18 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 55,555,919 55,556,867 Zm00001d035873 gras18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 58,019,428 58,020,376 GRMZM2G172657 gras19 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 161,941,687 161,944,142 Zm00001d021973 gras19 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 167,371,997 167,373,775 GRMZM2G129154 gras2 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 158,560,400 158,562,023 Zm00001d011881 gras2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 163,868,830 163,870,179 GRMZM2G116638 gras21 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 137,434,183 137,440,188 Zm00001d030500 gras21 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 139,651,718 139,653,346 GRMZM2G173429 gras22 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 135,825,173 135,827,459 Zm00001d026050 gras22 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 137,005,720 137,007,591 GRMZM2G157679 gras23 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 180,798,590 180,801,759 Zm00001d042907 gras23 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 183,642,446 183,644,875 GRMZM2G140085 gras24 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 187,217,605 187,218,942 Zm00001d052463 gras24 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 190,499,638 190,502,261 GRMZM2G420280 gras25 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 51,272,702 51,274,207 Zm00001d003657 gras25 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 52,665,039 52,666,535 GRMZM5G868355 gras26 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 839,965 841,260 GRMZM2G110067 gras27 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 71,030,279 71,032,027 Zm00001d029474 gras27 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 72,302,363 72,303,943 GRMZM2G342217 gras28 Chr4 21,604,764 21,607,924 Zm00001d049249 gras28 Chr4 22,848,841 22,851,983 AC198366.3_FG004 gras29 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 1,890,881 1,892,401 Zm00001d023248 gras29 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 1,456,929 1,458,449 GRMZM2G179325 gras3 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 155,690,714 155,694,188 Zm00001d030744 gras3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 157,566,433 157,567,911 GRMZM2G176537 gras30 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 117,338,432 117,340,217 Zm00001d025133 gras30 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 105,808,862 105,810,346 GRMZM5G825321 gras31 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 19,769,962 19,772,850 Zm00001d002718 gras31 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 20,400,045 20,402,210 GRMZM2G051785 gras32 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 27,346,189 27,348,215 Zm00001d045589 gras32 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 27,423,699 27,425,201 GRMZM2G079470 gras33 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 88,488,422 88,491,040 Zm00001d029855 gras33 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 90,443,929 90,445,866 GRMZM2G163427 gras34 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 842,617 845,669 Zm00001d048604 gras34 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 1,058,559 1,060,856 GRMZM2G386362 gras35 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 4,624,290 4,626,096 Zm00001d002023 gras35 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 4,587,796 4,589,602 GRMZM2G348780 gras36 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 161,047,325 161,049,647 Zm00001d030838 gras36 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 162,461,903 162,463,566 GRMZM2G015080 gras37 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 150,778,730 150,782,551 Zm00001d005029 gras37 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 154,743,078 154,746,493 GRMZM2G098517 gras38 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 161,325,637 161,329,188 Zm00001d021946 gras38 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 166,769,647 166,771,323 GRMZM2G408012 gras39 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 181,911,451 181,912,595 Zm00001d017129 gras39 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 186,410,705 186,413,913 GRMZM2G082387 gras4 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 150,869,807 150,871,966 Zm00001d042127 gras4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 152,192,576 152,193,919 GRMZM2G368909 gras40 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 293,715,271 293,717,691 Zm00001d034664 gras40 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 299,204,252 299,206,111 GRMZM5G885274 gras41 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 205,139,992 205,141,687 AC234164.1_FG004 gras42 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 24,984,785 24,987,244 Zm00001d045507 gras42 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 24,956,261 24,958,111 GRMZM5G895672 gras43 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 827,079 829,016 Zm00001d048600 gras43 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 1,042,494 1,044,431 GRMZM2G028039 gras45 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 149,430,555 149,437,059 GRMZM2G001426 gras46 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 69,955,114 69,957,195 Zm00001d044065 gras46 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 218,260,054 218,261,481 GRMZM2G089782 gras47 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 124,035,075 124,037,072 Zm00001d041498 gras47 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 124,367,636 124,370,607 GRMZM2G018254 gras48 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 513,060 515,231 Zm00001d048588 gras48 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 712,461 714,365 GRMZM5G821439 gras49 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 204,949,825 204,954,417 Zm00001d006551 gras49 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 210,843,272 210,854,196 GRMZM2G146018 gras5 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 142,759,880 142,761,574 Zm00001d041919 gras5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 143,639,361 143,640,839 GRMZM2G159475 gras50 from Entrez Gene Chr3 125,733,039 125,735,799 Zm00001d041536 gras50 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 126,130,758 126,132,890 GRMZM2G028608 gras51 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 46,590,168 46,592,051 Zm00001d003553 gras51 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 47,859,916 47,861,739 GRMZM2G109869 gras52 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 15,351,727 15,354,059 Zm00001d002573 gras52 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 15,738,092 15,739,963 GRMZM2G060265 gras53 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 1,953,455 1,955,531 Zm00001d027292 gras53 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 2,019,934 2,021,379 GRMZM2G106548 gras54 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 158,406,894 158,408,665 Zm00001d021826 gras54 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 163,785,585 163,786,943 GRMZM2G104342 gras55 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 9,827,131 9,829,504 Zm00001d013385 gras55 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 10,169,946 10,171,655 GRMZM2G037286 gras56 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 155,175,171 155,176,649 Zm00001d038518 gras56 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 159,108,179 159,109,672 GRMZM2G089662 gras57 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 38,410,832 38,413,066 Zm00001d035670 gras57 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 40,169,888 40,172,068 GRMZM2G132794 gras58 assigned by the Grassius project, (Yilmaz et al 2009); also From: Slewinski et al., 2014 Chr1 77,494,290 77,496,510 Zm00001d029607 gras58 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 79,004,272 79,006,164 AC204621.4_FG006 gras59 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 1,274,853 1,275,830 Zm00001d048624 gras59 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 1,538,337 1,539,457 GRMZM2G346706 gras6 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 133,612,993 133,614,885 Zm00001d011070 gras6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 138,014,214 138,016,097 GRMZM2G089636 gras60 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 38,422,200 38,424,095 Zm00001d035671 gras60 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 40,181,265 40,183,145 GRMZM2G055263 gras61 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 37,809,278 37,810,975 Zm00001d028526 gras61 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 38,187,938 38,189,632 GRMZM2G313078 gras62 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 156,946,311 156,947,989 Zm00001d038609 gras62 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 160,900,038 160,901,318 GRMZM2G418899 gras63 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 162,852,139 162,862,787 Zm00001d022034 gras63 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 168,331,519 168,332,583 GRMZM2G425366 gras64 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 219,524,850 219,526,665 Zm00001d007248 gras64 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 225,609,655 225,611,470 GRMZM2G133169 gras65 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 270,571,160 270,573,052 Zm00001d033834 gras65 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 275,262,743 275,264,398 AC200124.3_FG005 gras66 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 62,906,676 62,907,011 GRMZM2G049159 gras67 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 40,143,545 40,147,542 Zm00001d028603 gras67 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 40,510,526 40,516,015 GRMZM2G073823 gras68 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 829,955 831,938 Zm00001d048601 gras68 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 1,045,391 1,047,319 GRMZM2G153333 gras69 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 148,102,723 148,106,458 Zm00001d038225 gras69 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 151,983,412 151,987,196 GRMZM2G013016 gras7 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 166,194,240 166,195,917 Zm00001d042472 gras7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 168,768,639 168,770,255 GRMZM2G114680 gras70 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 103,353,117 103,362,197 Zm00001d046783 gras70 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 105,852,291 105,853,661 GRMZM2G117949 gras71 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 117,530,782 117,531,764 Zm00001d047123 gras71 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 119,342,278 119,342,634 GRMZM2G073805 gras72 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 832,522 834,779 Zm00001d048602 gras72 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 1,048,188 1,050,188 GRMZM2G125501 gras73 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 209,545,748 209,547,741 Zm00001d006744 gras73 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 215,722,019 215,723,389 GRMZM2G359304 gras74 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 123,178,843 123,180,450 Zm00001d047266 gras74 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 124,861,500 124,863,107 GRMZM2G431309 gras75 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 208,500,828 208,504,903 Zm00001d006701 gras75 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 214,683,529 214,685,193 GRMZM2G028438 gras76 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 156,049,665 156,051,935 Zm00001d051461 gras76 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 159,541,879 159,543,702 GRMZM5G889326 gras77 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 137,480,065 137,481,525 Zm00001d037901 gras77 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 141,534,061 141,535,449 GRMZM2G037792 gras79 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 138,720,419 138,723,128 Zm00001d026158 gras79 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 140,012,416 140,014,572 GRMZM2G098800 gras80 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 153,223,584 153,226,721 GRMZM2G169636 gras81 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 165,196,140 165,197,777 Zm00001d022116 gras81 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 170,723,712 170,725,349 GRMZM2G106356 gras82 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 2,656,855 2,659,044 Zm00001d048682 gras82 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 3,226,716 3,228,605 GRMZM2G073779 gras83 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 836,061 838,338 Zm00001d048603 gras83 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 1,051,644 1,057,496 GRMZM2G106336 gras84 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 2,654,200 2,655,918 Zm00001d048681 gras84 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 3,223,779 3,225,488 GRMZM2G019060 gras85 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 209,040,871 209,042,963 Zm00001d006721 gras85 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 215,252,093 215,253,853 GRMZM2G317287 gras86 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 1,886,674 1,888,997 Zm00001d023247 gras86 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 1,452,722 1,454,992 GRMZM2G091656 gras9 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 213,905,717 213,907,179 Zm00001d053163 gras9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 217,428,587 217,430,008 GRMZM2G102499 grf1 Classical Gene Chr2 41,931,698 41,935,612 Zm00001d003401 grf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 43,088,493 43,092,367 GRMZM2G078641 grf2 Chr10 123,126,089 123,136,710 Zm00001d025617 grf2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 124,144,806 124,148,744 GRMZM5G893117 grf9 Chr5 211,773,221 211,774,543 GRMZM2G178261 grftf1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 272,415,607 272,419,742 Zm00001d033876 grftf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 277,130,907 277,134,992 GRMZM2G105335 grftf10 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 177,152,123 177,154,056 Zm00001d052112 grftf10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 180,147,356 180,150,053 GRMZM5G850129 grftf11 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 108,478,031 108,479,906 Zm00001d037117 grftf11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 112,965,440 112,967,072 GRMZM2G067743 grftf12 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 9,818,084 9,819,919 Zm00001d000238 grftf12 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73V4_ctg49 34,019 35,965 GRMZM2G045977 grftf13 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 196,193,200 196,194,593 Zm00001d017602 grftf13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 201,330,993 201,332,190 GRMZM5G853392 grftf14 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 8,709,195 8,720,923 Zm00001d013346 grftf14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 9,051,468 9,063,110 GRMZM2G099862 grftf15 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 225,828,392 225,831,803 Zm00001d007465 grftf15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 232,275,513 232,278,861 GRMZM2G004619 grftf2 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 199,378,455 199,380,799 GRMZM2G096709 grftf3 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 145,016,797 145,019,476 Zm00001d021362 grftf3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 149,911,394 149,914,056 GRMZM2G018414 grftf4 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 257,246,035 257,248,752 Zm00001d033396 grftf4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 261,791,305 261,794,041 GRMZM2G129147 grftf5 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 140,394,154 140,397,947 Zm00001d026240 grftf5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 141,714,589 141,718,409 GRMZM2G034876 grftf6 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 200,344,613 200,348,143 Zm00001d017742 grftf6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 205,734,245 205,737,675 GRMZM2G098594 grftf7 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 60,352,538 60,355,691 Zm00001d035965 grftf7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 62,968,941 62,972,074 GRMZM2G041223 grftf8 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 12,202,775 12,208,055 Zm00001d002429 grftf8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 12,492,416 12,496,032 GRMZM2G124566 grftf9 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 155,831,893 155,833,246 Zm00001d051456 grftf9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 159,322,444 159,323,547 GRMZM2G021694 GRMZM2G021694 From Sequence in Yang et al., 2016 Chr2 27,625,614 27,627,505 GRMZM2G023347 GRMZM2G023347 Chr5 17,340,297 17,343,212 GRMZM2G033962 GRMZM2G033962 Jamann et al., 2017 Chr2 219,435,832 219,441,286 GRMZM2G043191 GRMZM2G043191 Chr1 253,852,796 253,855,290 GRMZM2G048522 GRMZM2G048522 Chr1 210,142,896 210,145,204 GRMZM2G055238 GRMZM2G055238 Chr6 9,651,143 9,652,873 GRMZM2G055704 GRMZM2G055704 Chr1 5,524,395 5,526,067 Zm00001d027454 GRMZM2G055704 v4 Chr1 5,603,127 5,604,467 GRMZM2G077227 GRMZM2G077227 Chr3 5,995,366 5,998,366 GRMZM2G085218 GRMZM2G085218 Jamann et al., 2017 Chr9 106,530,026 106,531,123 GRMZM2G097297 GRMZM2G097297 Chr4 193,094,389 193,096,319 GRMZM2G102770 GRMZM2G102770 Je et al., 2016 Chr3 3,428,861 3,429,262 GRMZM2G106903 GRMZM2G106903 Chr7 82,745,968 82,758,374 Zm00001d020014 GRMZM2G106903 Chr7 85,615,135 85,627,490 GRMZM2G119067 GRMZM2G119067 Chr9 127,725,764 127,727,228 GRMZM2G128995 GRMZM2G128995 Chr8 77,266,793 77,270,611 GRMZM2G132169 GRMZM2G132169 Chr3 183,701,021 183,703,536 GRMZM2G138074 GRMZM2G138074 Chr3 187,768,902 187,771,862 GRMZM2G145152 GRMZM2G145152 Chr7 127,613,281 127,615,125 GRMZM2G153722 GRMZM2G153722 Pace et al., 2015 Chr4 62,590,194 62,601,980 Zm00001d050089 GRMZM2G153722 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 65,078,952 65,090,738 GRMZM2G154580 GRMZM2G154580 Jamann et al., 2017 Chr1 90,223,947 90,224,841 GRMZM2G158062 GRMZM2G158062 Chr7 155,653,647 155,658,404 GRMZM2G161004 GRMZM2G161004 Chr1 188,202,887 188,206,003 GRMZM2G177227 GRMZM2G177227 Chr3 165,900,464 165,902,629 Zm00001d042461 GRMZM2G177227 Chr3 168,478,175 168,480,329 GRMZM2G179768 GRMZM2G179768 Chr5 205,986,569 205,987,795 GRMZM2G315431 GRMZM2G315431 Chr7 103,904,514 103,907,063 GRMZM2G329181 GRMZM2G329181 Chr1 286,049,789 286,052,959 GRMZM2G350428 GRMZM2G350428 Je et al., 2016 Chr5 3,782,236 3,785,900 GRMZM2G359322 GRMZM2G359322 Jamann et al., 2017 Chr9 123,215,070 123,216,079 GRMZM2G370081 GRMZM2G370081 Chr7 163,962,939 163,968,773 Zm00001d022072 GRMZM2G370081 Chr7 169,436,693 169,442,713 GRMZM2G380227 GRMZM2G380227 Chr1 197,608,242 197,610,896 GRMZM2G391746 GRMZM2G391746 Je et al., 2016 Chr2 4,045,899 4,046,558 GRMZM2G418415 GRMZM2G418415 Chr2 206,376,607 206,378,103 GRMZM2G423617 GRMZM2G423617 Je et al., 2016 Chr8 24,647,332 24,648,491 GRMZM2G427603 GRMZM2G427603 Je et al., 2016 Chr10 145,857,098 145,858,255 GRMZM2G443509 GRMZM2G443509 Chr10 113,181,083 113,188,620 GRMZM2G480050 GRMZM2G480050 Je et al., 2016 Chr7 15,467,965 15,468,908 GRMZM2G080603 grp1 Classical Gene Chr1 178,503,667 178,505,233 Zm00001d031168 grp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 180,447,018 180,448,137 GRMZM2G009448 grp2 Chr10 17,611,993 17,615,725 Zm00001d023734 grp2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 17,851,766 17,855,585 GRMZM2G154954 grp3 Classical Gene Chr5 31,464,367 31,465,552 Zm00001d014100 grp3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 32,482,212 32,482,991 GRMZM2G025205 grp4 from: AB014475 Chr2 130,608,944 130,609,749 Zm00001d004728 grp4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 134,139,577 134,140,330 GRMZM2G150295 grx1 from T12674 Chr2 30,571,551 30,574,948 Zm00001d003081 grx1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 31,389,813 31,393,200 GRMZM2G111579 gsh1 Chr6 24,549,311 24,554,370 Zm00001d035445 gsh1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 25,930,825 25,935,845 GRMZM2G421491 gsht1 B73_2 alignment to sequence accession FJ573212 Chr1 276,882,449 276,887,250 Zm00001d034035 gsht1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 281,760,570 281,764,626 GRMZM2G172322 gsr1 Classical Gene Chr1 12,985,602 12,991,971 Zm00001d027769 gsr1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 13,177,255 13,183,634 Zm00001d052263 gss1 v4 Chr4 185,228,834 185,234,452 GRMZM2G116273 gst1 Classical Gene Chr8 172,671,226 172,674,089 Zm00001d012675 gst1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 178,411,857 178,414,647 GRMZM2G096153 gst10 Chr1 7,861,824 7,863,470 Zm00001d027542 gst10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 7,885,525 7,886,863 GRMZM2G119499 gst11 Chr1 7,819,661 7,821,095 Zm00001d027539 gst11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 7,844,326 7,845,737 GRMZM2G096269 gst12 Chr1 7,854,954 7,856,758 Zm00001d027540 gst12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 7,878,334 7,879,915 GRMZM2G126781 gst13 Chr9 151,975,181 151,977,920 Zm00001d048353 gst13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 154,861,537 154,862,959 GRMZM2G175134 gst14 Chr1 85,725,085 85,726,426 Zm00001d029801 gst14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 87,469,723 87,475,392 GRMZM2G150474 gst15 Chr8 127,252,872 127,255,231 GRMZM5G895383 gst16 Chr7 147,866,596 147,870,180 Zm00001d021470 gst16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 153,075,349 153,079,559 GRMZM2G064255 gst17 Chr5 174,453,111 174,454,058 GRMZM2G019090 gst18 from: AF244683 Chr3 136,292,387 136,351,651 Zm00001d041772 gst18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 136,996,989 137,007,669 GRMZM2G335618 gst19 Chr6 104,021,616 104,022,697 Zm00001d036951 gst19 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 107,194,843 107,195,520 GRMZM2G132093 gst2 Christensen et al. 2015 Chr10 90,214,397 90,215,794 Zm00001d024839 gst2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 90,384,434 90,385,822 GRMZM2G447632 gst20 Chr3 206,949,798 206,950,761 GRMZM2G428168 gst21 Chr3 149,352,435 149,353,721 GRMZM2G330635 gst22 Chr10 96,774,298 96,775,703 GRMZM2G416632 gst23 Chr7 128,406,348 128,407,955 Zm00001d020780 gst23 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 132,447,942 132,449,006 GRMZM2G032856 gst24 Chr5 211,087,584 211,088,858 Zm00001d018220 gst24 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 216,862,591 216,863,616 GRMZM2G161905 gst25 Chr9 155,866,676 155,867,611 Zm00001d048558 gst25 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 158,667,068 158,667,751 GRMZM2G363540 gst26 Chr4 37,262,740 37,264,743 GRMZM2G077206 gst27 aligns to AF244692 Chr8 136,446,031 136,447,290 Zm00001d011154 gst27 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 140,938,753 140,939,834 GRMZM2G146475 gst28 Chr3 149,448,034 149,449,090 Zm00001d042102 gst28 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 150,720,597 150,721,538 GRMZM2G127789 gst29 Chr3 149,351,129 149,351,997 Zm00001d042095 gst29 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 150,585,101 150,586,111 GRMZM2G044383 gst30 Chr1 81,787,076 81,788,381 Zm00001d029708 gst30 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 83,411,025 83,411,720 GRMZM2G475059 gst31 Chr1 8,107,800 8,109,879 Zm00001d027557 gst31 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 8,129,042 8,130,156 GRMZM2G041685 gst32 Chr1 81,512,105 81,512,883 Zm00001d029700 gst32 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 83,119,704 83,120,481 GRMZM2G145069 gst34 Chr1 81,325,327 81,326,926 Zm00001d029696 gst34 v4 Chr1 82,924,832 82,926,012 GRMZM2G161891 gst35 Chr9 155,857,221 155,858,230 Zm00001d048559 gst35 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 158,676,251 158,677,196 GRMZM2G178079 gst37 Chr1 81,588,783 81,594,131 Zm00001d029704 gst37 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 83,198,362 83,199,180 GRMZM2G066369 gst38 Chr1 81,649,181 81,650,653 GRMZM2G028821 gst39 Chr1 81,612,701 81,613,806 Zm00001d029706 gst39 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 83,226,938 83,228,043 GRMZM2G146246 gst4 Classical Gene Chr3 155,015,581 155,017,338 Zm00001d042216 gst4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 156,422,305 156,423,867 GRMZM2G054653 gst40 Chr1 81,526,010 81,527,198 Zm00001d029701 gst40 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 83,132,970 83,133,833 GRMZM2G097989 gst41 Chr6 147,253,085 147,254,465 Zm00001d038192 gst41 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 151,106,706 151,108,105 GRMZM2G025190 gst42 Chr1 81,450,790 81,452,151 Zm00001d029699 gst42 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 83,058,555 83,059,659 GRMZM2G308687 gst5 Chr1 285,410,265 285,411,865 Zm00001d034356 gst5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 290,470,998 290,471,672 GRMZM2G129357 gst6 Chr7 5,520,895 5,524,522 Zm00001d018809 gst6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 5,834,880 5,838,491 GRMZM2G028556 gst7 Chr3 149,477,875 149,478,958 Zm00001d042104 gst7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 150,759,060 150,760,119 GRMZM2G156877 gst8 Chr3 194,233,310 194,235,176 Zm00001d043344 gst8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 197,152,506 197,154,049 GRMZM2G126763 gst9 Chr9 151,986,613 151,988,051 Zm00001d027541 gst9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 7,882,159 7,883,359 GRMZM2G005624 gt1 from Whipple et al 2011 Chr1 23,240,104 23,243,489 Zm00001d028129 gt1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 23,625,801 23,627,370 GRMZM2G177412 gtr1 from: W21756; B73_v2 model provided by A Huffaker May 2013 for propep2 Chr10 144,041,132 144,046,169 Zm00001d026405 gtr1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 145,315,798 145,319,169 GRMZM2G048012 gts1 Chr3 8,594,070 8,599,931 GRMZM2G432850 gun1 Chr1 147,903,774 147,907,639 Zm00001d030624 gun1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 149,517,794 149,522,592 GRMZM2G464328 gun4 Belcher et al., 2015 Chr10 5,645,820 5,646,965 Zm00001d023427 gun4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 5,286,289 5,287,104 GRMZM2G138689 gz50 from: AF371263 Chr7 120,206,897 120,208,211 Zm00001d020591 gz50 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 123,954,263 123,955,189 GRMZM2G335438 hac101b Chr1 165,244,317 165,269,287 GRMZM2G042231 haf101b Chr9 94,384,689 94,388,247 Zm00001d046579 haf101b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 96,779,812 96,809,887 GRMZM2G046021 hag101 assigned by the Grassius project, (Yilmaz et al 2009) to hagtf23 Chr5 33,838,765 33,844,703 Zm00001d014175 hag101 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 34,988,400 34,994,302 AC209858.4_FG004 hagtf1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 11,299,653 11,300,336 Zm00001d027703 hagtf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 11,493,216 11,495,046 GRMZM2G100872 hagtf11 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 37,226,550 37,231,577 Zm00001d003258 hagtf11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 38,097,924 38,102,928 GRMZM2G126856 hagtf12 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 77,310,976 77,311,742 Zm00001d004046 hagtf12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 78,654,099 78,655,004 GRMZM2G162056 hagtf13 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 118,365,107 118,365,860 Zm00001d004611 hagtf13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 121,662,299 121,662,886 GRMZM5G875676 hagtf14 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 224,059,127 224,063,731 Zm00001d007387 hagtf14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 230,449,349 230,454,131 GRMZM2G371912 hagtf15 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 145,855,491 145,858,353 Zm00001d042003 hagtf15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 146,955,644 146,958,515 GRMZM2G333775 hagtf16 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 222,666,939 222,668,487 Zm00001d044368 hagtf16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 226,325,648 226,326,241 GRMZM2G137961 hagtf17 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 224,625,939 224,628,844 Zm00001d044446 hagtf17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 228,293,972 228,296,826 GRMZM2G055141 hagtf18 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 31,089,308 31,092,725 Zm00001d049501 hagtf18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 32,640,368 32,643,706 GRMZM2G011624 hagtf19 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 163,657,377 163,666,263 Zm00001d051663 hagtf19 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 165,937,945 165,938,436 GRMZM2G114184 hagtf2 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 21,720,037 21,721,470 Zm00001d028074 hagtf2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 22,016,444 22,018,586 GRMZM2G059302 hagtf20 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 192,962,918 192,974,114 Zm00001d052680 hagtf20 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 197,106,177 197,117,342 GRMZM2G431445 hagtf21 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 4,426,539 4,427,138 Zm00001d013087 hagtf21 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 4,531,531 4,532,118 GRMZM2G176723 hagtf22 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 14,609,875 14,610,673 Zm00001d013596 hagtf22 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 15,094,771 15,095,668 GRMZM2G479325 hagtf24 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 92,208,775 92,210,342 Zm00001d015508 hagtf24 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 94,528,626 94,530,376 GRMZM2G169326 hagtf25 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 199,021,128 199,022,386 Zm00001d017691 hagtf25 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 204,333,624 204,344,512 GRMZM2G046288 hagtf26 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 210,937,687 210,940,587 Zm00001d018218 hagtf26 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 216,753,835 216,756,759 GRMZM2G049730 hagtf27 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 95,875,402 95,877,132 Zm00001d036716 hagtf27 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 98,531,308 98,533,026 GRMZM2G402538 hagtf28 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 124,479,190 124,483,759 Zm00001d037529 hagtf28 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 128,190,263 128,195,748 GRMZM2G062657 hagtf29 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 142,637,425 142,646,491 Zm00001d038054 hagtf29 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 146,525,775 146,534,899 GRMZM2G131618 hagtf3 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 226,679,443 226,680,502 Zm00001d032548 hagtf3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 230,202,990 230,203,968 GRMZM2G701207 hagtf30 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 154,534,441 154,541,243 Zm00001d038490 hagtf30 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 158,527,082 158,528,668 GRMZM2G458082 hagtf31 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 2,295,884 2,296,892 Zm00001d018677 hagtf31 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 2,375,647 2,377,309 GRMZM2G302778 hagtf32 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 27,695,451 27,697,345 Zm00001d019343 hagtf32 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 28,785,037 28,786,860 GRMZM5G813007 hagtf33 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 161,697,850 161,703,669 Zm00001d021956 hagtf33 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 167,089,441 167,095,239 GRMZM2G034495 hagtf34 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 100,928,654 100,930,976 Zm00001d010192 hagtf34 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 103,464,635 103,466,114 GRMZM2G050137 hagtf35 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 104,883,790 104,886,205 Zm00001d046823 hagtf35 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 107,325,990 107,327,852 GRMZM2G096352 hagtf36 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 149,311,288 149,315,650 Zm00001d048194 hagtf36 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 152,171,884 152,176,225 GRMZM2G136389 hagtf37 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 150,989,308 151,005,342 Zm00001d048286 hagtf37 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 153,893,462 153,897,261 AC149475.2_FG007 hagtf38 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 152,822,528 152,823,205 Zm00001d048407 hagtf38 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 155,701,484 155,702,161 GRMZM2G134426 hagtf39 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 156,523,971 156,546,958 Zm00001d048574 hagtf39 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 159,326,202 159,349,212 GRMZM2G135849 hagtf4 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 226,894,220 226,895,735 Zm00001d032556 hagtf4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 230,440,139 230,441,090 GRMZM2G137715 hagtf40 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 51,010,484 51,019,069 Zm00001d024169 hagtf40 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 52,321,108 52,329,461 GRMZM2G057554 hagtf41 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 123,707,093 123,710,625 Zm00001d025640 hagtf41 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 124,760,949 124,764,322 GRMZM2G359735 hagtf42 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 126,160,152 126,165,437 Zm00001d025713 hagtf42 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 127,154,778 127,159,945 GRMZM5G818977 hagtf43 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 143,741,016 143,743,695 Zm00001d026391 hagtf43 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 144,991,865 144,994,560 GRMZM2G099305 hagtf6 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 279,963,848 279,966,746 Zm00001d034143 hagtf6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 285,008,208 285,010,916 GRMZM2G031062 hagtf7 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 287,272,867 287,273,796 Zm00001d034417 hagtf7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 292,390,330 292,390,911 GRMZM2G342856 hagtf8 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 287,341,950 287,342,703 Zm00001d034418 hagtf8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 292,463,721 292,464,302 GRMZM2G478798 hagtf9 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 287,360,790 287,362,436 Zm00001d034419 hagtf9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 292,476,450 292,477,004 GRMZM2G044126 ham101 Chr2 213,200,911 213,205,830 Zm00001d006918 ham101 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 219,348,782 219,353,657 GRMZM5G851405 hat1 Chr7 95,111,087 95,115,489 GRMZM2G067402 hb1 aligns to cDNA AF236080 Chr9 145,596,856 145,598,153 Zm00001d048020 hb1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 148,178,266 148,179,408 GRMZM2G004334 hb10 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 109,244,071 109,247,202 Zm00001d037140 hb10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 113,744,465 113,748,815 GRMZM2G064466 hb100 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 82,921,613 82,926,989 Zm00001d029736 hb100 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 84,581,725 84,587,077 GRMZM2G111964 hb101 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 25,478,199 25,487,470 Zm00001d008942 hb101 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 26,279,366 26,280,197 GRMZM2G139963 hb102 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 14,957,965 14,960,921 Zm00001d027852 hb102 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 15,193,281 15,196,077 GRMZM2G062244 hb107 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 208,276,499 208,277,537 Zm00001d006687 hb107 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 214,450,310 214,451,531 GRMZM2G060050 hb108 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 6,753,231 6,754,253 GRMZM2G127537 hb11 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 123,539,134 123,541,042 Zm00001d020670 hb11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 127,456,340 127,458,007 GRMZM2G061101 hb110 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 257,512,113 257,518,809 Zm00001d033404 hb110 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 262,057,100 262,063,813 GRMZM2G003304 hb112 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 218,768,608 218,773,418 Zm00001d032316 hb112 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 221,942,141 221,946,939 GRMZM2G060541 hb113 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 149,427,195 149,428,878 GRMZM2G381748 hb114 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 137,335,415 137,341,548 GRMZM2G021339 hb115 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 165,861,785 165,863,994 Zm00001d051749 hb115 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 168,776,069 168,778,157 GRMZM2G386276 hb118 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 189,749,774 189,754,836 Zm00001d043231 hb118 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 192,587,492 192,592,698 GRMZM2G003509 hb119 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 173,247,423 173,257,862 Zm00001d031061 hb119 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 175,170,463 175,176,066 AC233899.1_FG004 hb12 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 149,912,584 149,914,098 Zm00001d048227 hb12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 152,791,018 152,793,577 GRMZM2G056600 hb120 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 129,296,234 129,298,384 Zm00001d020804 hb120 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 133,411,779 133,413,849 GRMZM2G131476 hb121 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 109,642,904 109,644,735 Zm00001d030191 hb121 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 112,125,984 112,127,811 GRMZM2G028622 hb122 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 146,494,874 146,496,217 Zm00001d026537 hb122 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 147,855,536 147,856,873 GRMZM2G074645 hb123 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 95,285,620 95,290,526 Zm00001d010060 hb123 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 97,570,198 97,574,373 GRMZM2G023291 hb124 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 251,772,748 251,774,599 Zm00001d033246 hb124 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 255,864,303 255,869,980 GRMZM2G034113 hb126 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 195,705,583 195,707,271 Zm00001d006195 hb126 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 201,274,832 201,276,496 GRMZM2G119999 hb127 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 139,960,481 139,962,631 Zm00001d030532 hb127 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 142,193,026 142,194,949 GRMZM2G041462 hb128 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 142,432,248 142,434,060 Zm00001d021268 hb128 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 147,335,002 147,336,496 GRMZM2G142962 hb129 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 198,225,939 198,227,907 Zm00001d031745 hb129 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 200,647,593 200,649,580 GRMZM2G104204 hb13 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 160,792,661 160,793,924 Zm00001d021934 hb13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 166,183,894 166,185,410 GRMZM2G314064 hb130 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 52,343,963 52,347,384 Zm00001d028986 hb130 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 53,579,645 53,583,324 GRMZM2G111204 hb131 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 175,320,204 175,326,578 Zm00001d005584 hb131 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 179,525,467 179,531,907 GRMZM2G118063 hb17 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 58,000,726 58,009,266 Zm00001d000247 hb17 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73V4_ctg123 9,585 17,517 GRMZM2G004957 hb18 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 84,242,542 84,246,083 Zm00001d024701 hb18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 84,124,039 84,129,119 GRMZM2G168898 hb2 alingns to cDNA DQ171946 Chr6 159,342,531 159,343,955 Zm00001d038718 hb2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 163,324,435 163,325,813 GRMZM2G060507 hb20 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 154,007,940 154,011,643 Zm00001d048471 hb20 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 156,890,103 156,894,363 GRMZM2G076272 hb21 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 58,196,208 58,199,144 Zm00001d046223 hb21 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 73,064,270 73,067,798 GRMZM2G178741 hb22 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 151,525,953 151,528,343 Zm00001d048312 hb22 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 154,433,350 154,435,731 GRMZM2G166041 hb24 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 238,046,062 238,047,920 Zm00001d000303 hb24 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73V4_ctg107 44,572 45,477 GRMZM2G178102 hb25 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 123,281,942 123,288,759 Zm00001d041489 hb25 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 123,607,100 123,613,712 GRMZM2G010929 hb26 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 14,086,644 14,092,137 Zm00001d008612 hb26 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 14,469,570 14,471,588 GRMZM2G426140 hb27 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 102,549,951 102,556,475 Zm00001d015671 hb27 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 105,092,463 105,093,878 GRMZM2G033138 hb28 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 79,734,099 79,747,217 Zm00001d015265 hb28 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 81,987,671 81,994,006 GRMZM2G125294 hb29 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 68,635,067 68,646,943 Zm00001d009562 hb29 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 70,193,548 70,205,812 GRMZM2G122750 hb3 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 164,671,161 164,681,928 Zm00001d039002 hb3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 168,609,968 168,621,490 GRMZM2G327059 hb30 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 5,080,780 5,086,704 Zm00001d027435 hb30 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 5,202,748 5,208,577 GRMZM2G011588 hb33 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 256,543,119 256,549,354 Zm00001d033378 hb33 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 261,046,942 261,053,205 GRMZM2G002915 hb34 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 178,781,917 178,784,182 Zm00001d005692 hb34 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 183,562,202 183,564,363 GRMZM2G333565 hb35 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 212,127,074 212,129,332 GRMZM2G396114 hb36 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 273,157,848 273,168,093 Zm00001d033898 hb36 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 277,881,879 277,892,452 GRMZM2G148098 hb37 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 13,673,081 13,677,600 Zm00001d013547 hb37 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 14,028,554 14,034,708 GRMZM2G013617 hb38 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 56,969,090 56,972,316 Zm00001d035907 hb38 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 59,432,425 59,435,437 GRMZM2G106276 hb4 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 20,880,508 20,881,839 Zm00001d045400 hb4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 20,678,179 20,679,403 GRMZM2G158403 hb40 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 155,487,601 155,494,622 Zm00001d042228 hb40 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 156,887,633 156,898,805 GRMZM2G117164 hb41 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 190,526,953 190,528,628 Zm00001d017422 hb41 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 195,636,860 195,637,865 GRMZM2G477415 hb42 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 54,874,440 54,875,451 Zm00001d014628 hb42 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 56,552,093 56,553,397 GRMZM2G307397 hb43 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 54,944,892 54,945,953 Zm00001d014630 hb43 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 56,629,737 56,631,089 GRMZM2G307400 hb44 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 54,947,382 54,948,335 Zm00001d014629 hb44 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 56,627,074 56,628,308 GRMZM2G126808 hb45 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 29,542,179 29,544,587 Zm00001d028304 hb45 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 29,830,012 29,832,203 GRMZM2G126239 hb46 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 214,938,624 214,943,016 Zm00001d044081 hb46 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 218,481,322 218,485,402 GRMZM2G474656 hb47 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 160,917,510 160,922,715 Zm00001d038811 hb47 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 164,911,115 164,915,840 GRMZM2G154641 hb48 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 179,564,866 179,569,662 Zm00001d042864 hb48 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 182,383,771 182,388,532 GRMZM2G097349 hb49 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 243,185,151 243,187,447 Zm00001d033005 hb49 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 246,790,551 246,792,861 GRMZM2G132367 hb5 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 19,250,088 19,252,388 Zm00001d027991 hb5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 19,584,556 19,586,616 AC187157.4_FG005 hb52 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 22,645,969 22,650,386 Zm00001d008869 hb52 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 23,362,875 23,368,001 GRMZM2G044752 hb53 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 21,024,779 21,026,404 Zm00001d002754 hb53 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 21,690,129 21,691,754 GRMZM2G041127 hb54 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 188,712,314 188,714,917 Zm00001d005951 hb54 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 193,728,105 193,730,506 GRMZM2G126170 hb55 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 85,732,538 85,749,435 Zm00001d020046 hb55 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 88,533,002 88,549,660 GRMZM2G047715 hb56 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 121,587,332 121,589,718 Zm00001d050834 hb56 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 125,421,188 125,423,374 GRMZM2G060444 hb57 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 92,273,726 92,276,759 Zm00001d004234 hb57 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 94,228,544 94,231,577 GRMZM2G366130 hb59 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 186,502,150 186,503,354 Zm00001d005875 hb59 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 191,461,110 191,462,620 GRMZM2G458728 hb6 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 212,853,641 212,859,163 Zm00001d053151 hb6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 216,317,487 216,322,672 GRMZM2G068672 hb60 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 70,173,601 70,175,049 Zm00001d036118 hb60 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 72,944,758 72,946,052 GRMZM2G105834 hb62 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 145,045,937 145,048,121 Zm00001d047995 hb62 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 147,605,077 147,607,285 GRMZM2G004641 hb64 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 13,640,026 13,643,872 Zm00001d027802 hb64 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 13,863,300 13,867,102 GRMZM2G151266 hb65 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 289,933,104 289,944,419 Zm00001d034515 hb65 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 295,313,706 295,336,499 GRMZM2G351330 hb66 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 22,220,873 22,222,180 Zm00001d002799 hb66 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 22,972,434 22,973,879 GRMZM2G047448 hb67 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 3,392,385 3,393,860 GRMZM2G469551 hb69 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 230,596,368 230,608,346 Zm00001d032681 hb69 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 234,066,734 234,078,059 GRMZM2G122076 hb7 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 77,636,576 77,641,035 Zm00001d050310 hb7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 80,432,810 80,437,142 GRMZM2G396527 hb70 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 133,750,205 133,750,699 Zm00001d025964 hb70 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 134,976,903 134,978,448 GRMZM2G145690 hb71 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 211,123,234 211,127,092 Zm00001d018225 hb71 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 216,949,284 216,953,293 GRMZM2G170958 hb73 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 70,352,497 70,354,031 Zm00001d024410 hb73 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 69,483,649 69,484,945 GRMZM2G087741 hb74 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 53,883,227 53,893,066 GRMZM2G001289 hb75 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 8,289,450 8,295,761 Zm00001d002234 hb75 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 8,463,903 8,470,216 GRMZM2G125976 hb76 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 151,227,594 151,231,779 Zm00001d038355 hb76 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 155,172,016 155,176,200 GRMZM2G134260 hb77 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 20,839,231 20,841,005 Zm00001d045398 hb77 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 20,631,978 20,633,771 GRMZM2G148074 hb78 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 93,082,039 93,083,670 Zm00001d029934 hb78 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 95,220,121 95,221,774 GRMZM2G135447 hb8 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 281,887,974 281,894,959 Zm00001d034212 hb8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 286,887,707 286,896,784 GRMZM5G830671 hb81 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 88,279,708 88,280,617 Zm00001d036510 hb81 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 90,930,027 90,931,239 GRMZM2G126646 hb83 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 177,612,036 177,616,331 Zm00001d052133 hb83 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 180,558,735 180,563,266 GRMZM2G099319 hb84 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 179,614,336 179,618,197 Zm00001d031182 hb84 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 181,575,354 181,579,654 GRMZM2G008286 hb86 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 80,197,949 80,198,613 Zm00001d009802 hb86 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 82,152,551 82,155,226 GRMZM2G163641 hb87 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 85,249,981 85,252,420 Zm00001d046405 hb87 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 87,582,999 87,584,881 GRMZM2G038252 hb88 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 26,128,999 26,132,973 Zm00001d043076 hb88 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 188,444,921 188,448,749 GRMZM2G351018 hb9 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 174,048,466 174,058,838 Zm00001d012751 hb9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 179,755,488 179,769,766 GRMZM2G419252 hb90 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 89,175,622 89,178,462 Zm00001d050487 hb90 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 92,644,355 92,646,442 GRMZM2G122897 hb91 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 142,812,773 142,817,535 Zm00001d026351 hb91 Chr10 144,099,075 144,105,329 GRMZM2G094935 hb92 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 161,060,698 161,065,860 GRMZM2G318412 hb93 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 227,700,670 227,702,965 Zm00001d007525 hb93 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 233,973,935 233,975,586 GRMZM2G438260 hb96 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 92,119,412 92,123,393 Zm00001d004230 hb96 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 94,054,835 94,067,869 GRMZM5G803812 hb98 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 35,029,700 35,031,902 Zm00001d014201 hb98 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 36,222,862 36,225,042 GRMZM2G159357 hb99 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 210,208,545 210,222,742 Zm00001d043915 hb99 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 213,742,292 213,756,288 GRMZM2G161435 hbtf2 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 152,442,185 152,445,449 Zm00001d016298 hbtf2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 156,109,006 156,112,456 GRMZM5G898735 hcf106 Classical Gene Chr2 65,813,104 65,819,647 Zm00001d003913 hcf106 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 66,964,007 66,969,688 GRMZM2G151529 hcf106c Classical Gene Chr10 110,944,324 110,948,048 Zm00001d025267 hcf106c Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 111,824,838 111,828,519 GRMZM2G002165 hcf148 Belcher et al., 2015 Chr3 188,589,432 188,595,258 Zm00001d043201 hcf148 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 191,430,494 191,436,524 GRMZM2G121960 hcf3 from Hammani et al 2012 Chr1 49,770,451 49,792,278 Zm00001d028901 hcf3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 50,190,087 50,200,187 GRMZM2G038013 hcf60 Belcher et al., 2015 Chr10 148,969,561 148,970,286 Zm00001d026697 hcf60 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 150,284,617 150,285,015 GRMZM2G030628 hcp101a Chr4 66,925,030 66,935,727 Zm00001d050150 hcp101a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 69,407,277 69,429,725 GRMZM2G060669 hcp101b Chr4 238,860,480 238,864,568 Zm00001d053919 hcp101b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 243,647,953 243,651,842 GRMZM2G061806 hct1 Wang et al.,2015 Chr1 17,782,100 17,783,717 Zm00001d027946 hct1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 18,086,164 18,087,981 GRMZM2G034360 hct10 Chr8 166,031,514 166,034,207 GRMZM2G156296 hct11 called hct11 per Erich Grotewold Chr7 117,397,049 117,407,481 Zm00001d020530 hct11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 121,046,188 121,056,362 GRMZM2G179703 hct12 Chr1 202,955,872 202,958,418 Zm00001d031893 hct12 Chr1 205,617,823 205,620,362 GRMZM2G129266 hct13 Chr1 225,937,241 225,939,365 GRMZM2G114918 hct2 Wang et al.,2015 Chr1 17,842,579 17,844,302 Zm00001d027948 hct2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 18,147,157 18,148,937 GRMZM2G127251 hct3 Wang et al.,2015 Chr6 107,006,046 107,007,725 Zm00001d037073 hct3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 111,482,487 111,483,803 GRMZM2G030436 hct4 Wang et al.,2015 Chr1 140,328,950 140,330,902 Zm00001d030542 hct4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 142,569,190 142,571,156 GRMZM2G158083 hct5 Wang et al.,2015 Chr2 32,452,526 32,458,616 Zm00001d003129 hct5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 33,327,793 33,333,386 GRMZM2G035584 hct6 Chr5 183,658,122 183,663,110 Zm00001d017186 hct6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 188,273,103 188,277,915 AC215260.3_FG003 hct7 Wang et al.,2015 Chr3 17,028,296 17,029,723 Zm00001d039840 hct7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 16,366,920 16,369,185 GRMZM2G178769 hct8 Wang et al.,2015 Chr3 21,151,937 21,153,907 Zm00001d039956 hct8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 20,568,290 20,571,434 GRMZM2G131165 hct9 Wang et al.,2015 Chr1 211,484,865 211,490,236 Zm00001d032148 hct9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 214,491,081 214,496,190 GRMZM2G119703 hda102 from: AF440228 Chr2 59,091,885 59,102,871 Zm00001d003813 hda102 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 60,626,145 60,637,075 GRMZM2G136067 hda108 Classical Gene Chr4 65,983,218 65,988,818 GRMZM2G136067 hda108 Chr4 65,983,218 65,988,818 Zm00001d050139 hda108 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 68,410,505 68,416,118 GRMZM2G457889 hda109 from: EU952105 Chr2 210,299,363 210,310,868 Zm00001d006780 hda109 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 216,491,788 216,503,386 GRMZM2G107309 hda110 from: Entrez Gene 541972 Chr7 7,273,053 7,285,361 Zm00001d018864 hda110 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 7,675,154 7,687,966 GRMZM2G137409 hds1 GBWI-67591 (MaizeCyc), GRMZM2G137409 Chr5 182,174,564 182,181,190 Zm00001d017139 hds1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 186,706,299 186,712,746 GRMZM2G100146 hdt102 Chr8 135,663,882 135,666,488 Zm00001d011139 hdt102 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 140,120,555 140,123,091 GRMZM2G107457 hen1 from FJ910136 Chr7 7,266,068 7,271,089 Zm00001d018863 hen1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 7,668,475 7,673,706 GRMZM2G104081 hex1 from EU971594 & Zhou et al., 2014; Zhang et al., 2014 Chr3 7,079,526 7,083,312 Zm00001d039512 hex1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 6,248,365 6,252,317 GRMZM2G432801 hex2 from EU972171 & Zhou et al., 2014; Zhang et al., 2014 Chr6 160,433,339 160,440,597 Zm00001d038792 hex2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 164,389,095 164,395,441 GRMZM2G058745 hex3 from BT068218 & Zhou et al., 2014; Zhang et al., 2014 Chr8 124,182,497 124,187,982 GRMZM2G068913 hex4 Zhou et al., 2014; Zhang et al., 2014 Chr3 152,214,617 152,221,102 Zm00001d042146 hex4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 153,564,761 153,570,791 GRMZM5G856653 hex5 Zhou et al., 2014; Zhang et al., 2014 Chr3 199,340,491 199,346,889 Zm00001d043511 hex5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 202,355,009 202,361,480 GRMZM2G171373 hex6 Zhou et al., 2014; Zhang et al., 2014 Chr3 201,861,549 201,871,591 Zm00001d043607 hex6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 204,995,530 205,005,583 GRMZM2G051806 hex7 Zhou et al., 2014; Zhang et al., 2014 Chr6 130,163,346 130,166,258 Zm00001d037689 hex7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 134,063,370 134,066,401 GRMZM2G046686 hex8 Zhou et al., 2014; Zhang et al., 2014 Chr6 136,146,698 136,151,875 Zm00001d037861 hex8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 140,078,685 140,083,862 GRMZM2G467069 hex9 Zhou et al., 2014; Zhang et al., 2014 Chr8 158,729,478 158,739,079 Zm00001d011889 hex9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 164,038,137 164,044,860 GRMZM2G304548 hfi1 Chr2 160,784,375 160,785,866 Zm00001d005230 hfi1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 164,746,346 164,746,813 GRMZM2G173358 hggt1 from Likka et al 2013 Chr9 93,489,726 93,493,445 Zm00001d046558 hggt1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 95,895,575 95,899,061 GRMZM2G117755 hir1 Classical Gene Chr4 74,484,144 74,488,082 Zm00001d050265 hir1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 77,232,457 77,236,007 GRMZM2G150762 hir2 from Entrez gene 541820 Chr2 177,284,136 177,287,072 Zm00001d005648 hir2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 181,901,483 181,904,315 GRMZM2G070659 hir3 Chr6 167,774,457 167,777,264 GRMZM2G401308 his1a from: AW060063 Chr7 11,446,087 11,450,539 Zm00001d018981 his1a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 11,773,225 11,774,574 GRMZM2G305046 his2a1 Classical Gene Chr9 139,441,605 139,442,697 Zm00001d047787 his2a1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 141,785,644 141,786,727 GRMZM2G071959 his2b1 Classical Gene Chr7 119,943,268 119,944,091 Zm00001d020580 his2b1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 123,664,001 123,664,456 GRMZM2G119071 his2b2 Classical Gene Chr4 63,118,802 63,120,057 Zm00001d050100 his2b2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 65,618,139 65,618,591 GRMZM2G057852 his2b3 from Entrez gene 100274242 Chr2 183,846,599 183,847,686 Zm00001d005789 his2b3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 188,710,662 188,711,219 GRMZM2G306258 his2b4 Entrez Gene Chr3 181,560,116 181,560,956 Zm00001d042930 his2b4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 184,418,117 184,418,903 GRMZM2G342515 his2b5 from: EU970863 Chr4 160,982,217 160,983,377 Zm00001d051591 his2b5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 163,976,517 163,976,981 GRMZM2G151223 hk1 B73_v2 alignment to sequence accession AB042270 Chr5 205,601,061 205,610,801 Zm00001d017977 hk1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 211,161,703 211,171,628 GRMZM2G471529 hk2 B73_v2 alignment to sequence accession AB102956 Chr3 158,932,008 158,938,325 Zm00001d042312 hk2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 160,473,898 160,480,245 GRMZM2G158252 hk3 B73_v2 alignment to sequence accession AB102957 Chr5 38,775,552 38,832,527 Zm00001d014297 hk3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 40,021,551 40,049,955 GRMZM2G155767 hk4 Chr1 269,016,266 269,022,761 Zm00001d033786 hk4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 273,671,338 273,678,008 GRMZM2G025579 hk5 Chr9 108,537,120 108,544,101 GRMZM2G125943 hk6 Chr4 167,410,132 167,416,477 GRMZM5G881887 hm1 Classical Gene Chr1 199,788,957 199,790,819 Zm00001d031802 hm1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 202,214,939 202,217,025 GRMZM2G086773 hm2 Classical Gene Chr9 104,241,216 104,242,847 Zm00001d046811 hm2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 106,801,933 106,804,839 GRMZM2G136859 hma1 Chr1 4,439,061 4,441,061 Zm00001d027405 hma1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 4,536,701 4,538,190 GRMZM5G834758 hmg1 Classical Gene Chr5 63,828,350 63,830,554 Zm00001d014858 hmg1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 65,680,729 65,683,012 AC186524.3_FG005 hmg101 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 180,986,274 180,988,780 Zm00001d031233 hmg101 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 182,947,174 182,951,362 GRMZM2G162284 hmg103 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 198,277,094 198,279,041 Zm00001d006306 hmg103 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 204,114,307 204,116,336 GRMZM2G150348 hmg11 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 82,492,934 82,493,876 Zm00001d036355 hmg11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 85,387,744 85,388,687 GRMZM5G842484 hmg12 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 128,066,887 128,073,852 Zm00001d037615 hmg12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 131,885,556 131,892,995 GRMZM2G066528 hmg13 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 146,931,998 146,933,950 Zm00001d021433 hmg13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 152,095,387 152,097,351 GRMZM2G013821 hmg2 from: BT041105; hmg10 locus assigned by the Grassius project, (Yilmaz et al 2009) Chr5 194,096,097 194,097,995 Zm00001d017555 hmg2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 199,470,076 199,472,102 GRMZM2G156785 hmg3 From: Entrez Gene Chr4 154,652,176 154,654,247 Zm00001d051427 hmg3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 158,189,751 158,191,758 GRMZM2G024247 hmg4 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 210,840,744 210,844,797 Zm00001d043946 hmg4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 214,388,200 214,392,378 GRMZM2G144398 hmg5 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 142,353,620 142,359,570 Zm00001d051142 hmg5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 145,646,263 145,647,300 GRMZM2G060253 hmg9 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 140,132,841 140,135,501 Zm00001d016082 hmg9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 143,463,525 143,465,976 GRMZM2G106133 hmga102 from: AJ131371 & AF291748 Chr1 215,379,973 215,381,486 Zm00001d032239 hmga102 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 218,500,155 218,501,623 GRMZM6G310687 hmt1 Chr9 146,516,121 146,519,277 GRMZM2G039166 hmt4 from: AF297047 Chr3 192,284,006 192,285,910 Zm00001d043302 hmt4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 195,189,435 195,191,634 GRMZM2G043277 ho2 from chr 6 hit of EU962994 (Shi et al., 2013) Chr6 102,756,604 102,759,557 Zm00001d036894 ho2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 105,839,573 105,842,396 GRMZM2G157936 ho3 from second chr 9 hit of EU962994 (Shi et al., 2013) Chr9 89,991,673 89,992,909 Zm00001d046493 ho3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 92,349,534 92,350,909 GRMZM2G080274 hon101 from Entrez Gene 541973 Chr2 16,047,725 16,049,837 Zm00001d002601 hon101 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 16,461,905 16,462,911 GRMZM2G164020 hon110 from Cell Genomics Project (Oct 2013) Chr1 288,803,887 288,805,620 Zm00001d034479 hon110 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 294,118,392 294,119,816 GRMZM2G136369 hox1 from X67561 (chr 8); hb103 locus assigned by the Grassius project, (Yilmaz et al 2009) Chr8 123,435,516 123,441,977 Zm00001d010758 hox1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 127,166,352 127,183,436 GRMZM2G094935 hox2 from: X67561 (chr 6 hit) Chr6 161,060,698 161,065,860 Zm00001d038812 hox2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 164,961,618 164,983,809 GRMZM2G314546 hox3 from: AY109382 & assigned by the Grassius project, (Yilmaz et al 2009) to hb32 Chr3 197,462,441 197,475,910 Zm00001d043452 hox3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 200,451,086 200,464,251 GRMZM2G016439 hp1 from Cell Genomics Project (2013) Chr1 205,263,817 205,266,907 Zm00001d031961 hp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 208,050,358 208,053,463 GRMZM2G014154 hp2 Entrez Gene Chr2 166,064,149 166,067,375 Zm00001d005344 hp2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 170,204,369 170,207,404 GRMZM2G451604 hp3 Chr4 52,969,280 52,972,871 Zm00001d049952 hp3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 55,175,484 55,178,540 GRMZM6G986387 hpl1 from alignment to sequence AY540745 Chr4 240,875,600 240,876,493 GRMZM2G088396 hppd1 Chr5 83,895,923 83,898,077 Zm00001d015356 hppd1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 86,084,655 86,086,755 GRMZM2G015285 hrbp1 from: Entrez Gene 100383635 Chr2 228,792,133 228,793,917 Zm00001d007581 hrbp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 235,123,301 235,124,690 GRMZM2G168651 hrg1 Classical Gene Chr2 55,391,917 55,393,690 GRMZM2G085924 hsbp1 Classical Gene Chr2 127,723,813 127,725,400 Zm00001d004689 hsbp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 131,242,393 131,243,911 GRMZM2G065355 hsbp2 Entrez Gene 100283717 Chr9 34,805,920 34,808,236 Zm00001d045724 hsbp2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 35,182,183 35,184,071 GRMZM2G139082 hscf1 Chr9 107,641,598 107,645,415 Zm00001d046913 hscf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 110,228,864 110,232,333 GRMZM2G002131 hsftf1 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 186,829,423 186,833,487 Zm00001d005888 hsftf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 191,778,849 191,782,862 GRMZM2G165272 hsftf10 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 142,270,318 142,272,208 Zm00001d021263 hsftf10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 147,163,459 147,165,213 GRMZM2G132971 hsftf11 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 287,786,016 287,790,222 Zm00001d034433 hsftf11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 292,905,093 292,912,832 GRMZM2G173090 hsftf12 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 59,460,534 59,462,007 Zm00001d046204 hsftf12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 71,750,080 71,751,360 GRMZM2G165972 hsftf13 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 12,518,410 12,520,734 Zm00001d027757 hsftf13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 12,714,065 12,716,389 GRMZM2G118485 hsftf14 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 28,522,823 28,530,238 Zm00001d028269 hsftf14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 28,714,876 28,733,871 AC206165.3_FG007 hsftf15 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 159,812,447 159,814,105 Zm00001d038746 hsftf15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 163,786,743 163,788,401 AC205471.4_FG003 hsftf16 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 124,710,390 124,712,153 Zm00001d010812 hsftf16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 128,602,960 128,604,732 GRMZM2G003489 hsftf17 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 275,536,823 275,539,066 Zm00001d033987 hsftf17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 280,368,696 280,370,932 GRMZM2G105348 hsftf18 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 150,228,697 150,230,232 Zm00001d016255 hsftf18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 153,717,773 153,719,275 AC216247.3_FG001 hsftf19 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 63,539,447 63,541,926 Zm00001d029270 hsftf19 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 64,404,103 64,407,052 GRMZM2G088242 hsftf2 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 185,666,362 185,668,432 Zm00001d005843 hsftf2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 190,605,384 190,606,902 GRMZM2G301485 hsftf20 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 137,124,859 137,126,235 Zm00001d026094 hsftf20 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 138,304,690 138,305,939 GRMZM2G139535 hsftf21 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 125,896,425 125,900,126 Zm00001d020714 hsftf21 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 129,797,898 129,801,599 GRMZM2G384339 hsftf22 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 889,476 893,867 Zm00001d012823 hsftf22 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 925,235 928,518 GRMZM2G089525 hsftf23 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 217,438,918 217,440,728 Zm00001d044168 hsftf23 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 220,964,949 220,966,074 GRMZM2G010871 hsftf24 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 239,674,470 239,678,097 Zm00001d032923 hsftf24 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 243,208,029 243,211,663 GRMZM2G086880 hsftf25 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 144,887,947 144,889,311 Zm00001d011406 hsftf25 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 149,667,369 149,668,532 GRMZM2G025685 hsftf27 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 169,214,787 169,218,220 Zm00001d022295 hsftf27 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 174,697,653 174,700,664 GRMZM2G118047 hsftf28 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 77,070,952 77,072,996 Zm00001d046299 hsftf28 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 79,124,493 79,126,324 GRMZM2G179802 hsftf29 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 162,047,215 162,053,475 Zm00001d016520 hsftf29 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 165,944,432 165,950,570 GRMZM2G005815 hsftf3 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 219,545,854 219,552,097 Zm00001d044259 hsftf3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 223,146,310 223,151,904 GRMZM2G125969 hsftf4 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 9,712,577 9,716,596 Zm00001d018941 hsftf4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 9,991,664 9,995,513 GRMZM2G115456 hsftf5 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 299,272,434 299,277,717 Zm00001d034886 hsftf5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 304,715,056 304,719,918 GRMZM2G059851 hsftf6 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 168,263,116 168,266,561 Zm00001d016674 hsftf6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 172,180,319 172,183,764 GRMZM2G098696 hsftf7 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 195,298,840 195,300,584 Zm00001d052738 hsftf7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 199,404,178 199,405,434 GRMZM2G164909 hsftf8 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 197,781,323 197,783,002 Zm00001d031736 hsftf8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 200,197,812 200,199,489 GRMZM2G026742 hsftf9 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 146,028,201 146,032,662 Zm00001d048041 hsftf9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 148,611,010 148,615,970 GRMZM5G844723 hsk1 Classical Gene Chr9 129,484,814 129,489,588 GRMZM2G310431 hsp1 Classical Gene Chr8 168,506,539 168,509,902 Zm00001d012420 hsp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 174,179,964 174,183,186 GRMZM2G360681 hsp101 Classical Gene Chr6 160,816,570 160,820,239 Zm00001d038806 hsp101 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 164,808,309 164,812,048 GRMZM2G422240 hsp17.2 from: EU968243 & X65725 Chr3 20,468,262 20,468,719 Zm00001d039935 hsp17.2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 19,868,724 19,869,483 GRMZM2G404249 hsp18a gene model GRMZM2G056857 on RefGen_v1 corresponds to the gene model GRMZM2G404249 on RefGen_v2; also from BT070148 Chr9 132,803,660 132,804,501 Zm00001d047548 hsp18a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 134,965,867 134,966,361 GRMZM2G034157 hsp18c Classical Gene Chr8 21,620,266 21,621,116 Zm00001d008841 hsp18c Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 22,307,488 22,307,982 GRMZM2G083810 hsp18f Classical Gene Chr3 8,887,555 8,888,747 Zm00001d039566 hsp18f Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 8,104,720 8,105,217 GRMZM2G007729 hsp22 Chr4 179,852,643 179,853,912 Zm00001d052194 hsp22 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 182,772,609 182,773,786 GRMZM2G149647 hsp26 Chr1 33,464,178 33,465,385 Zm00001d028408 hsp26 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 33,789,050 33,790,182 GRMZM6G199466 hsp3 scaffold_369 81 586 GRMZM2G340251 hsp70-4 Classical Gene Chr3 126,479,381 126,484,522 Zm00001d041550 hsp70-4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 126,862,145 126,865,908 GRMZM5G833699 hsp90 from B73_v3 alignment to sequence accession S59780.1 Chr10 93,697,766 93,700,740 Zm00001d024903 hsp90 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 93,908,317 93,911,235 GRMZM2G118453 hstf2 assigned by the Grassius project, (Yilmaz et al 2009) to hstf26 Chr8 173,979,796 173,982,203 Zm00001d012749 hstf2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 179,671,303 179,673,854 GRMZM2G164612 htn1 Closest homolog to Htn1 in B73; Hurni et al., 2015 Chr8 151,637,927 151,643,014 Zm00001d011629 htn1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 156,763,311 156,774,071 GRMZM5G852396 hvp1 Chr9 18,325,419 18,326,021 GRMZM2G177974 hxa102 mybr66 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 276,758,755 276,765,477 GRMZM5G815323 hxa102 Chr1 276,766,707 276,769,810 Zm00001d034033 hxa102 Chr1 281,631,722 281,642,943 GRMZM2G152135 hyd3 from AY844957 Chr10 136,081,567 136,084,686 Zm00001d026056 hyd3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 137,257,366 137,260,572 GRMZM2G164318 hyd4 from GQ131287 Chr2 15,877,183 15,879,464 Zm00001d002589 hyd4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 16,287,469 16,289,962 GRMZM2G382534 hyd5 from DR817188 Chr9 153,962,138 153,964,502 Zm00001d048469 hyd5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 156,850,438 156,852,802 GRMZM2G090051 hyd6 from BQ619575 Chr1 5,373,808 5,376,230 GRMZM5G826824 hyd6 Chr1 6,347,072 6,348,308 Zm00001d027443 hyd6 v4 Chr1 5,463,952 5,466,250 GRMZM2G163683 hyd7 from BT040337 Chr4 236,566,951 236,568,885 GRMZM5G826824 hyd8 Owens et al., 2014 Chr1 6,347,072 6,348,308 GRMZM2G304378 hyp1 Classical Gene Chr9 15,981,191 15,983,094 GRMZM2G137367 iaa1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 6,550,506 6,561,486 Zm00001d027495 iaa1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 6,556,059 6,558,427 GRMZM2G138268 iaa10 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 117,785,060 117,789,665 Zm00001d041416 iaa10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 118,101,071 118,105,468 GRMZM2G167794 iaa11 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 118,083,629 118,085,345 Zm00001d041418 iaa11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 118,360,550 118,362,225 GRMZM2G057067 iaa12 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 199,377,733 199,380,221 Zm00001d043515 iaa12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 202,396,755 202,399,107 GRMZM2G031615 iaa14 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 16,440,811 16,449,027 Zm00001d049141 iaa14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 17,575,403 17,583,311 GRMZM2G148188 iaa15 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 16,521,450 16,523,297 Zm00001d049143 iaa15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 17,662,558 17,664,405 GRMZM2G059544 iaa16 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 39,589,807 39,591,031 Zm00001d049715 iaa16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 41,271,800 41,273,024 GRMZM2G390691 iaa17 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 131,399,345 131,410,844 Zm00001d050972 iaa17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 134,412,097 134,423,581 GRMZM2G142768 iaa18 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 171,402,585 171,405,007 Zm00001d051911 iaa18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 174,427,408 174,429,846 GRMZM2G152796 iaa19 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 4,201,092 4,202,519 Zm00001d013071 iaa19 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 4,310,449 4,311,941 GRMZM2G079957 iaa2 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 170,553,927 170,555,938 Zm00001d030993 iaa2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 172,413,967 172,415,265 AC195340.3_FG004 iaa20 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 5,379,304 5,384,290 Zm00001d013154 iaa20 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 5,503,823 5,508,576 GRMZM2G077356 iaa21 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 7,780,495 7,783,441 Zm00001d013302 iaa21 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 8,065,262 8,071,957 GRMZM2G128421 iaa22 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 17,364,530 17,365,963 Zm00001d013707 iaa22 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 18,196,300 18,197,763 GRMZM2G121309 iaa23 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 151,751,416 151,755,323 Zm00001d016277 iaa23 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 155,417,891 155,421,796 GRMZM2G030465 iaa24 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 214,460,676 214,461,910 Zm00001d018414 iaa24 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 220,284,286 220,285,517 GRMZM2G000158 iaa25 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 80,078,086 80,079,839 Zm00001d000288 iaa25 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73V4_ctg104 67,198 68,824 GRMZM2G079200 iaa26 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 103,303,641 103,305,338 Zm00001d036918 iaa26 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 106,378,038 106,379,735 GRMZM2G147243 iaa28 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 133,380,995 133,384,727 Zm00001d037774 iaa28 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 137,231,049 137,234,466 GRMZM2G141205 iaa29 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 146,698,068 146,698,763 Zm00001d038175 iaa29 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 150,542,749 150,543,931 GRMZM2G366373 iaa3 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 253,362,067 253,363,413 Zm00001d033319 iaa3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 258,878,226 258,879,592 GRMZM2G074427 iaa30 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 160,362,230 160,365,730 Zm00001d038784 iaa30 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 164,332,917 164,336,272 GRMZM2G149449 iaa31 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 9,398,079 9,398,800 GRMZM2G115357 iaa32 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 10,975,561 10,976,899 Zm00001d018973 iaa32 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 11,248,578 11,249,882 GRMZM2G048131 iaa33 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 142,810,056 142,811,513 Zm00001d021279 iaa33 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 147,725,357 147,726,867 GRMZM5G853479 iaa34 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 814,321 815,001 Zm00001d008201 iaa34 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 989,823 991,128 GRMZM2G573324 iaa36 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 67,598,583 67,602,666 Zm00001d009532 iaa36 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 69,164,642 69,168,927 GRMZM2G359924 iaa37 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 108,094,649 108,096,892 Zm00001d010360 iaa37 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 111,039,047 111,041,287 GRMZM2G035465 iaa38 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 110,338,289 110,342,132 Zm00001d010411 iaa38 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 113,492,914 113,496,509 GRMZM2G159285 iaa4 Chr1 275,098,311 275,101,078 Zm00001d033976 iaa4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 279,923,057 279,925,806 GRMZM2G435290 iaa40 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 4,283,462 4,287,324 Zm00001d044818 iaa40 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 3,871,449 3,874,530 GRMZM2G001799 iaa41 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 16,255,609 16,257,497 Zm00001d045203 iaa41 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 15,993,040 15,994,740 GRMZM2G479834 iaa42 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 35,447,564 35,453,445 Zm00001d024008 iaa42 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 36,379,483 36,384,610 GRMZM2G134517 iaa43 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 134,279,626 134,280,393 Zm00001d025989 iaa43 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 135,487,493 135,492,026 GRMZM2G143352 iaa44 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 145,384,711 145,385,639 Zm00001d026480 iaa44 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 146,721,094 146,722,100 GRMZM5G809195 iaa5 Chr1 288,465,742 288,467,255 Zm00001d034463 iaa5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 293,749,001 293,752,408 GRMZM5G825707 iaa6 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 128,381,501 128,388,580 Zm00001d004697 iaa6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 131,929,878 131,937,148 GRMZM2G104176 iaa7 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 7,118,667 7,121,305 Zm00001d039513 iaa7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 6,287,613 6,290,045 GRMZM2G004696 iaa8 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 10,076,687 10,080,041 Zm00001d039624 iaa8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 9,366,940 9,370,004 GRMZM2G074742 iaa9 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 48,983,289 48,985,069 Zm00001d040541 iaa9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 48,775,678 48,777,774 GRMZM2G024131 iaglu1 from: L34847 Chr1 262,955,292 262,957,901 Zm00001d033580 iaglu1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 267,761,424 267,763,217 GRMZM2G133806 ial1 from: EU962641; assigned by the Grassius project to ldb40 (Yilmaz et al 2009) Chr8 164,174,038 164,177,190 Zm00001d012180 ial1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 169,618,708 169,621,826 GRMZM2G063151 ibp1 from: X79085 Chr9 140,000,852 140,005,166 Zm00001d047808 ibp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 142,331,350 142,336,894 GRMZM2G110309 ibp2 Classical Gene Chr1 40,356,719 40,362,217 Zm00001d028608 ibp2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 40,713,008 40,718,506 GRMZM2G056369 icl1 from BT040479 Chr7 154,227,775 154,230,208 Zm00001d021666 icl1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 159,493,893 159,495,965 GRMZM2G011357 id1 Classical Gene Chr1 239,667,869 239,671,192 Zm00001d032922 id1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 243,201,405 243,204,865 Zm00001d035308 idc1 v4 Chr6 20,483,349 20,484,802 GRMZM2G042666 idd7 from: AY754865 Chr7 146,276,397 146,281,153 Zm00001d021403 idd7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 151,211,055 151,215,873 GRMZM2G179677 iddp1 from: AY754867 Chr1 206,161,656 206,168,807 Zm00001d031992 iddp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 208,942,917 208,950,782 GRMZM2G090595 iddp10 from: AY754864 Chr5 194,215,974 194,223,601 Zm00001d017560 iddp10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 199,613,954 199,621,606 GRMZM2G432128 idh1 from: BT043437 Chr8 147,224,301 147,229,189 Zm00001d011487 idh1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 152,072,966 152,077,705 GRMZM5G829778 idh2 from: BT038585 Chr6 165,734,052 165,737,680 Zm00001d039079 idh2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 169,685,197 169,688,921 GRMZM2G321725 IDP1465 Chr9 147,172,658 147,176,871 Zm00001d048091 IDP1465 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 149,914,247 149,918,405 GRMZM2G043493 IDP1489 Chr1 56,577,187 56,579,012 Zm00001d029078 IDP1489 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 57,267,805 57,269,655 GRMZM2G139797 IDP1639 Jia et al., 2016 Chr10 130,166,275 130,168,203 Zm00001d025833 IDP1639 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 131,304,078 131,306,002 GRMZM2G154574 IDP1657 Chr7 152,997,411 153,005,288 Zm00001d021624 IDP1657 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 158,312,986 158,322,909 GRMZM2G113726 IDP1951 Chr1 183,832,172 183,835,855 Zm00001d031315 IDP1951 Chr1 185,871,254 185,874,831 GRMZM2G121514 IDP2375 Chr6 147,413,665 147,418,505 Zm00001d038196 IDP2375 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 151,266,841 151,271,722 GRMZM2G061662 IDP2440 Chr1 293,217,775 293,228,618 Zm00001d034640 IDP2440 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 298,682,827 298,693,357 GRMZM2G353822 IDP2454 Chr8 124,537,076 124,538,244 GRMZM2G061043 IDP257 Chr8 166,638,225 166,643,039 Zm00001d012314 IDP257 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 172,325,977 172,333,899 GRMZM2G128057 IDP263 Chr10 139,399,452 139,402,605 Zm00001d026193 IDP263 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 140,677,876 140,680,877 GRMZM2G103266 IDP441 Chr6 81,850,247 81,856,948 Zm00001d036334 IDP441 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 84,736,095 84,742,496 GRMZM2G327189 IDP472 from: EU977091 Chr3 209,919,655 209,921,032 GRMZM2G093716 IDP51 Chr5 172,973,456 172,980,736 Zm00001d016816 IDP51 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 177,054,357 177,058,283 GRMZM2G110832 IDP844 Chr9 4,009,489 4,011,176 Zm00001d044816 IDP844 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 3,595,060 3,596,502 GRMZM2G481529 IDPC175 Chr1 38,637,316 38,641,262 Zm00001d028554 IDPC175 Chr1 38,993,551 38,998,358 GRMZM2G088309 ifa1 yab2 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 26,576,546 26,581,707 Zm00001d028216 ifa1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 26,771,165 26,776,231 GRMZM2G118250 ig1 Classical Gene Chr3 169,260,970 169,264,296 Zm00001d042560 ig1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 171,820,603 171,823,900 GRMZM2G046191 igl1 Classical Gene Chr1 288,331,936 288,337,173 GRMZM2G046191 igl1 from alignment of cDNA AF271384 Chr1 288,331,936 288,337,173 GRMZM2G004583 ij1 Classical Gene Chr7 134,118,864 134,129,700 Zm00001d020971 ij1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 138,210,336 138,221,164 GRMZM2G017077 im30p1 Classical Gene Chr3 168,411,704 168,416,865 Zm00001d042530 im30p1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 170,938,371 170,943,460 GRMZM2G173251 imd1 chr 1 alignment to 7C03E11 Chr1 44,533,349 44,534,414 Zm00001d028735 imd1 Chr1 44,718,501 44,719,536 GRMZM5G803490 imd2 from: EU968951 Chr2 24,987,243 24,990,796 Zm00001d002880 imd2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 25,546,609 25,550,239 GRMZM2G104613 imd3 ENTREZ GENE Chr10 148,406,957 148,410,672 Zm00001d026675 imd3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 149,745,849 149,749,481 GRMZM2G120857 imd4 chr 8 aligment with 7C03E11 Chr8 2,311,933 2,319,535 GRMZM2G088088 imp1 Chr8 82,956,568 82,961,691 Zm00001d009850 imp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 85,065,908 85,071,126 GRMZM2G042733 in1 Classical Gene Chr7 19,360,149 19,366,043 Zm00001d019170 in1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 20,105,168 20,111,095 GRMZM2G139300 incw1 Classical Gene Chr5 169,497,597 169,502,089 Zm00001d016708 incw1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 173,403,817 173,408,283 GRMZM2G123633 incw3 Classical Gene Chr10 114,308,530 114,310,922 Zm00001d025355 incw3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 115,297,049 115,299,501 GRMZM2G119941 incw4 from: AF043347 Chr2 3,190,291 3,193,646 Zm00001d001941 incw4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 3,201,231 3,204,850 GRMZM2G095725 incw5 Chr10 114,256,599 114,259,719 Zm00001d025354 incw5 Chr10 115,243,957 115,246,970 GRMZM2G434500 ipe1 Chen et al., 2016 Chr1 80,973,413 80,975,997 Zm00001d029683 ipe1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 82,567,028 82,569,436 GRMZM2G108285 ippi1 From homology to Genbank sequence. Chr7 155,598,887 155,602,061 Zm00001d021709 ippi1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 160,908,408 160,912,025 GRMZM2G145029 ippi2 From homology to Genbank sequence. Chr8 104,182,030 104,186,085 Zm00001d010274 ippi2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 106,962,806 106,966,802 GRMZM2G133082 ippi3 From homology to Genbank sequence. Chr6 147,323,465 147,329,028 Zm00001d038193 ippi3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 151,176,435 151,181,930 GRMZM2G097258 ipt1 from NM_001127724 Chr3 145,470,464 145,473,438 Zm00001d041982 ipt1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 146,545,493 146,548,229 GRMZM2G102915 ipt10 from EU797192 and from homology to rice IPT10 acces# AB239807 Chr6 81,887,637 81,889,903 Zm00001d036339 ipt10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 84,773,604 84,774,833 GRMZM2G084462 ipt2 from EU263126 Chr2 63,147,052 63,148,227 Zm00001d003869 ipt2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 64,103,998 64,104,966 GRMZM2G393014 ipt3 based on location given in Vyroubalova et al. 2009 Chr8 151,130,587 151,131,675 Zm00001d011618 ipt3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 156,198,746 156,199,792 GRMZM2G415751 ipt3B based on location given in Vyroubalova et al. 2009 Chr3 207,330,115 207,331,215 Zm00001d043812 ipt3B Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 210,777,669 210,778,733 GRMZM2G104559 ipt4 from Gene ID: 100158230 Chr7 19,429,668 19,430,971 Zm00001d019171 ipt4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 20,132,013 20,133,107 AC210013.4_FG005 ipt5 from EU263128 Chr5 3,324,796 3,325,809 Zm00001d013021 ipt5 Chr5 3,407,648 3,408,661 GRMZM2G116878 ipt6 from EU263129 Chr1 291,634,128 291,635,190 Zm00001d034584 ipt6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 297,077,046 297,078,035 GRMZM2G436770 ipt7 from EU263130 Chr3 67,172,553 67,173,644 Zm00001d040810 ipt7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 67,403,313 67,404,371 GRMZM2G025429 ipt8 from EU263131 Chr6 162,939,562 162,941,480 Zm00001d038921 ipt8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 166,949,706 166,950,815 GRMZM2G018046 ipt9 from primer sequence in Vyroubalova et al., 2009 Chr2 161,360,574 161,361,649 Zm00001d005239 ipt9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 165,340,406 165,341,449 AC226235.2_FG001 irl1 Chr3 30,997,053 30,998,201 Zm00001d040173 irl1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 30,593,009 30,594,535 GRMZM2G150796 iso3 Chr7 129,134,063 129,145,654 Zm00001d020799 iso3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 133,232,803 133,244,605 GRMZM2G023194 isp1 from: M77224 Chr10 111,795,775 111,798,782 Zm00001d025286 isp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 112,660,019 112,662,739 GRMZM5G803874 isr1 Classical Gene Chr10 138,512,812 138,515,509 GRMZM2G394450 ivr1 Classical Gene Chr2 23,504,839 23,509,410 Zm00001d002830 ivr1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 24,145,621 24,150,188 GRMZM2G089836 ivr2 Classical Gene Chr5 67,537,393 67,540,691 Zm00001d014947 ivr2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 69,452,584 69,455,758 GRMZM2G465553 iws1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 292,209,665 292,211,668 Zm00001d034606 iws1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 297,653,338 297,656,301 GRMZM2G108716 iws2 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 2,792,516 2,796,308 Zm00001d012993 iws2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 2,874,875 2,878,453 GRMZM2G050412 jac1 from Cell Genomics project (Oct 2013) Chr6 31,707,695 31,709,328 Zm00001d035561 jac1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 33,193,521 33,195,150 GRMZM2G142964 jmj1 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 60,821,906 60,898,916 Zm00001d009396 jmj1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 62,195,436 62,201,240 GRMZM2G044301 jmj10 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 134,321,285 134,327,453 Zm00001d037803 jmj10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 138,208,458 138,215,829 GRMZM2G339379 jmj11 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 162,996,669 163,001,414 Zm00001d012119 jmj11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 168,442,999 168,449,985 GRMZM2G054162 jmj12 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 240,883,468 240,895,570 Zm00001d054070 jmj12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 245,864,833 245,876,851 GRMZM2G078198 jmj13 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 201,051,876 201,056,117 Zm00001d052933 jmj13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 205,274,822 205,277,906 GRMZM2G057466 jmj14 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 103,624,693 103,630,846 Zm00001d030108 jmj14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 106,180,425 106,186,974 GRMZM2G060919 jmj15 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 199,272,243 199,280,188 Zm00001d017700 jmj15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 204,553,720 204,562,336 GRMZM2G180086 jmj16 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 44,657,285 44,663,403 Zm00001d014422 jmj16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 45,956,643 45,962,835 GRMZM2G152877 jmj17 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 66,961,410 66,967,126 Zm00001d029392 jmj17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 68,668,722 68,675,980 GRMZM2G321810 jmj18 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 165,491,789 165,497,935 Zm00001d042447 jmj18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 168,081,519 168,087,932 GRMZM2G108589 jmj19 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 1,519,824 1,523,155 Zm00001d018647 jmj19 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 1,619,886 1,623,205 GRMZM2G171163 jmj2 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 172,386,710 172,389,864 Zm00001d051964 jmj2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 175,484,595 175,495,683 AC149475.2_FG005 jmj20 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 152,791,245 152,801,912 Zm00001d048404 jmj20 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 155,670,062 155,681,591 GRMZM2G383210 jmj21 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 169,239,655 169,259,508 Zm00001d051849 jmj21 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 172,182,519 172,202,452 GRMZM2G417089 jmj22 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 248,568,098 248,575,059 Zm00001d033158 jmj22 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 252,436,182 252,443,465 GRMZM2G428933 jmj3 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 130,273,915 130,282,483 GRMZM2G027075 jmj4 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 172,459,736 172,468,782 Zm00001d051965 jmj4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 175,517,244 175,528,400 GRMZM2G070885 jmj5 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 106,518,289 106,522,429 Zm00001d020367 jmj5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 109,762,337 109,767,776 GRMZM2G107109 jmj6 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 172,286,685 172,295,419 Zm00001d051959 jmj6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 175,347,420 175,358,199 GRMZM2G156910 jmj7 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 116,655,146 116,661,337 Zm00001d037313 jmj7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 120,389,101 120,407,827 GRMZM2G431157 jmj8 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 19,854,631 19,862,449 Zm00001d023788 jmj8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 20,294,622 20,305,450 GRMZM2G140524 jmj9 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 172,338,861 172,347,926 Zm00001d051961 jmj9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 175,383,401 175,397,333 GRMZM2G056400 kan1 Classical Gene Chr1 215,657,189 215,662,587 Zm00001d032249 kan1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 218,790,654 218,795,894 GRMZM2G175827 kan3 Classical Gene Chr4 80,099,618 80,112,468 Zm00001d050350 kan3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 82,930,195 82,941,888 GRMZM2G089803 kao2 Nelissen, et al. 2012 Chr9 140,279,526 140,282,696 Zm00001d047830 kao2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 142,669,294 142,672,793 GRMZM2G070273 kcbp1 from: XM_008670512 Chr2 3,067,260 3,076,483 Zm00001d001928 kcbp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 3,067,705 3,079,031 GRMZM2G022915 kch1 alignment to RefGen_v2 by cDNA Y07632 gi 2104907 Chr3 214,355,254 214,361,335 Zm00001d044056 kch1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 218,044,053 218,050,489 GRMZM2G020859 kch2 from: Y09747 (chr 6 hit) Chr6 148,554,980 148,565,653 Zm00001d038252 kch2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 152,420,069 152,431,280 GRMZM2G081666 kch3 by alignment of cDNA AJ421640 gi 18077658 to RefGen_v2 (M Schaeffer) Chr4 227,476,359 227,480,644 GRMZM2G081666 kch3 Classical Gene Chr4 227,476,359 227,480,644 Zm00001d053446 kch3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 231,900,509 231,904,788 GRMZM2G093313 kch4 from alignment of cDNA AJ558238 gi 34576238 to B73 RefGen_v2 Chr3 3,843,599 3,847,168 Zm00001d039386 kch4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 3,100,278 3,104,395 GRMZM2G171279 kch5 assigned by alignment of cDNA Y07632 gi 2104907 on RefGen_v2 Chr8 146,628,450 146,633,412 Zm00001d011473 kch5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 151,507,871 151,513,696 AC234152.1_FG002 kch6 Chr8 101,614,919 101,619,583 GRMZM2G119256 kds1 Chr8 68,450,787 68,453,575 Zm00001d009554 kds1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 70,012,280 70,015,464 GRMZM2G159948 kelp1 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 204,699,354 204,701,927 Zm00001d043705 kelp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 207,917,857 207,926,660 GRMZM2G090213 kelp2 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 172,514,217 172,520,347 Zm00001d016803 kelp2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 176,578,339 176,584,546 GRMZM2G112535 kelp3 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 153,332,086 153,334,819 GRMZM5G889999 kik1 from: U82481 Chr7 156,219,814 156,225,643 Zm00001d021729 kik1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 161,576,147 161,582,076 GRMZM2G158394 kin1 from: EU955694 Chr7 176,260,711 176,262,411 Zm00001d022630 kin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 181,798,165 181,799,397 GRMZM2G163761 kip1 Classical Gene Chr1 256,573,454 256,575,135 Zm00001d033379 kip1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 261,077,259 261,078,842 GRMZM2G017087 kn1 Classical Gene Chr1 271,407,490 271,415,210 Zm00001d033859 kn1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 276,073,335 276,081,242 GRMZM2G159431 knox1 assigned by Gramene; confirmed by alignment to protein sequence at proper map location (Mar 2012) Chr1 5,003,070 5,007,708 Zm00001d027431 knox1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 5,123,182 5,127,784 GRMZM2G002225 knox10 alignment of protein sequence AAB33489 (Mar 2012) Chr5 13,957,726 13,980,235 Zm00001d013560 knox10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 14,346,333 14,347,197 GRMZM2G055243 knox2 Chr9 93,868,786 93,877,183 Zm00001d046568 knox2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 96,269,799 96,278,036 GRMZM2G000743 knox3 Classical Gene Chr1 271,693,702 271,695,058 Zm00001d033861 knox3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 276,344,334 276,366,296 GRMZM5G832409 knox5 Chr6 24,181,173 24,192,653 Zm00001d035439 knox5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 25,561,769 25,573,225 GRMZM2G370332 knox6 Entrez Gene 100383874; hb79 locus assigned by the Grassius project, (Yilmaz et al 2009) Chr5 94,481,164 94,484,870 Zm00001d015549 knox6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 96,925,401 96,928,976 GRMZM2G433591 knox7 from: AM182385 Chr4 235,745,133 235,750,283 Zm00001d053749 knox7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 240,414,100 240,417,560 GRMZM2G059308 ko1 from BT042205 Chr9 79,864,518 79,871,342 Zm00001d046344 ko1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 81,994,757 82,001,394 GRMZM2G161472 ko2 from EZ104608 Chr9 79,629,933 79,634,006 Zm00001d046342 ko2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 81,729,257 81,733,312 GRMZM2G042627 kpp1 From U81960 and HQ858748; assigned to fha16 by the Grassius project, (Yilmaz et al 2009) Chr7 19,331,382 19,358,462 Zm00001d019169 kpp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 20,089,932 20,104,098 GRMZM2G161868 kri1 Chr3 202,434,872 202,437,694 Zm00001d009638 kri2 alignment with AY103782 & T15312 in v4 Chr8 73,989,684 73,993,106 GRMZM2G129569 krp1 Chr4 149,310,956 149,317,153 Zm00001d051308 krp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 152,675,908 152,682,127 GRMZM2G436981 krp11 Chr7 1,144,796 1,151,528 Zm00001d018624 krp11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 1,247,292 1,253,741 GRMZM2G034828 krp13 from: AF272758 Chr1 246,878,397 246,883,986 Zm00001d033112 krp13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 250,446,439 250,452,170 GRMZM2G054418 krp15 Chr10 133,348,999 133,354,774 Zm00001d025951 krp15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 134,563,080 134,575,911 GRMZM2G124883 krp16 Chr8 174,510,782 174,515,041 Zm00001d012763 krp16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 180,226,489 180,258,297 GRMZM2G092232 krp17 Chr1 3,123,304 3,129,299 GRMZM2G136838 krp2 Chr9 26,591,337 26,597,907 Zm00001d045554 krp2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 26,632,900 26,639,701 GRMZM2G173700 krp3 Chr8 123,987,283 123,994,126 Zm00001d010790 krp3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 127,852,075 127,860,775 GRMZM2G320689 krp4 Chr1 204,903,790 204,910,966 Zm00001d031943 krp4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 207,690,177 207,696,620 GRMZM2G093391 krp5 from: AF272753 Chr6 105,208,479 105,214,743 GRMZM2G132371 krp8 Chr4 51,919,903 51,926,112 Zm00001d049938 krp8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 54,069,553 54,076,899 GRMZM5G881464 krp9 from: AF272756 Chr6 127,292,905 127,310,354 Zm00001d037599 krp9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 131,075,168 131,092,642 GRMZM2G016922 ks1 from: BT067769 Chr1 237,109,339 237,115,584 Zm00001d032858 ks1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 240,465,118 240,471,300 GRMZM2G093526 ks2 from: BT042236 Chr2 10,574,515 10,578,571 Zm00001d002350 ks2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 10,686,293 10,689,881 GRMZM2G093603 ks3 from Nelissen et al 2012 Table S2 Chr2 10,562,532 10,567,539 Zm00001d002349 ks3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 10,674,198 10,679,341 AC214360.3_FG001 ks4 from: BT054450 Chr3 110,200,299 110,204,076 Zm00001d041082 ks4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 96,077,271 96,081,198 Zm00001d024514 ks5 v4 Chr10 75,446,562 75,449,964 GRMZM2G391312 ks6 from: AFW61735 (Fu et al., 2015) Chr4 53,284,808 53,288,327 Zm00001d049957 ks6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 55,492,468 55,496,164 GRMZM2G177169 l15 rom B73_v2 alignment to cDNA FJ490677.1 GI:218684530 (July 2011) Chr6 95,481,573 95,484,475 Zm00001d036698 l15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 98,069,169 98,071,529 GRMZM2G135019 la1 Dong et al., 2013 Chr4 18,000,248 18,006,785 Zm00001d049174 la1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 19,153,020 19,159,545 GRMZM2G140527 lac10 Rius et al., 2016 Chr4 4,216,683 4,219,243 Zm00001d048759 lac10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 5,033,268 5,035,828 GRMZM2G092483 lbd1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 10,818,799 10,819,994 Zm00001d027678 lbd1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 10,986,933 10,988,125 GRMZM2G154320 lbd10 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 254,949,670 254,950,944 Zm00001d033335 lbd10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 259,429,013 259,429,858 GRMZM2G017319 lbd11 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 255,383,520 255,385,569 Zm00001d033347 lbd11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 259,828,724 259,831,189 GRMZM2G447176 lbd12 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 258,866,950 258,868,413 Zm00001d033466 lbd12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 263,448,597 263,450,323 GRMZM2G011385 lbd13 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 286,409,470 286,410,127 Zm00001d034384 lbd13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 291,492,379 291,492,970 GRMZM2G177110 lbd14 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 209,518,630 209,519,766 Zm00001d006739 lbd14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 215,644,201 215,645,366 AC207888.3_FG009 lbd15 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 234,934,167 234,936,218 Zm00001d007919 lbd15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 242,414,840 242,416,891 GRMZM2G132693 lbd17 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 23,103,082 23,104,417 Zm00001d040004 lbd17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 22,562,754 22,564,198 AC218973.3_FG003 lbd18 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 93,840,474 93,841,301 Zm00001d041205 lbd18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 105,360,314 105,361,141 GRMZM2G092517 lbd20 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 184,175,771 184,177,879 Zm00001d043036 lbd20 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 187,095,368 187,096,814 GRMZM2G025758 lbd21 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 192,970,241 192,971,643 Zm00001d043311 lbd21 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 195,854,423 195,855,820 GRMZM2G095982 lbd22 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 6,391,031 6,392,616 Zm00001d048889 lbd22 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 7,192,147 7,193,388 GRMZM2G079768 lbd23 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 74,723,078 74,724,495 Zm00001d050269 lbd23 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 77,463,528 77,464,649 GRMZM2G075499 lbd24 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 170,838,318 170,839,405 Zm00001d051891 lbd24 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 173,818,577 173,819,660 GRMZM2G025989 lbd25 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 183,769,526 183,770,541 Zm00001d052317 lbd25 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 186,984,558 187,006,976 GRMZM2G079185 lbd26 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 15,203,964 15,206,688 Zm00001d013625 lbd26 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 15,732,403 15,735,219 GRMZM2G362627 lbd27 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 18,398,844 18,400,101 Zm00001d013732 lbd27 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 18,855,513 18,856,412 GRMZM2G165805 lbd28 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 28,091,948 28,093,028 Zm00001d035498 lbd28 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 29,567,724 29,568,516 GRMZM2G386095 lbd29 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 64,768,557 64,769,285 Zm00001d036032 lbd29 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 67,441,712 67,442,299 GRMZM2G110913 lbd3 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 33,801,737 33,804,005 Zm00001d028413 lbd3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 34,109,298 34,111,567 GRMZM2G180319 lbd30 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 85,751,370 85,752,655 Zm00001d036435 lbd30 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 88,337,769 88,338,425 GRMZM2G044150 lbd31 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 141,232,270 141,233,226 Zm00001d038013 lbd31 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 145,148,378 145,149,283 GRMZM2G121487 lbd32 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 147,424,552 147,430,624 Zm00001d038197 lbd32 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 151,277,845 151,283,466 GRMZM2G386674 lbd33 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 159,313,186 159,314,511 Zm00001d038717 lbd33 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 163,280,343 163,281,305 GRMZM2G704330 lbd34 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 6,439,450 6,441,294 Zm00001d018832 lbd34 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 6,806,891 6,808,735 GRMZM5G868471 lbd35 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 81,896,223 81,898,153 Zm00001d009823 lbd35 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 83,961,158 83,963,468 GRMZM2G096064 lbd36 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 103,789,363 103,790,421 Zm00001d010264 lbd36 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 106,551,052 106,551,980 AC234149.1_FG002 lbd37 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 122,851,972 122,852,823 Zm00001d010749 lbd37 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 126,702,595 126,703,446 GRMZM2G073044 lbd38 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 122,998,640 123,000,039 Zm00001d010751 lbd38 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 126,849,996 126,850,937 AC214648.3_FG005 lbd39 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 131,315,533 131,316,325 Zm00001d010978 lbd39 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 135,743,207 135,743,999 GRMZM2G021095 lbd4 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 44,165,940 44,167,054 Zm00001d028721 lbd4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 44,340,623 44,341,737 GRMZM2G145568 lbd41 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 138,557,713 138,558,785 Zm00001d047752 lbd41 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 140,901,122 140,902,338 GRMZM2G150594 lbd42 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 143,011,637 143,013,786 Zm00001d047921 lbd42 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 145,465,257 145,467,375 GRMZM5G873586 lbd44 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 3,275,775 3,281,566 Zm00001d023316 lbd44 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 2,854,293 2,860,135 GRMZM2G060544 lbd5 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 72,360,144 72,361,438 Zm00001d029506 lbd5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 73,706,673 73,707,614 GRMZM2G044902 lbd6 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 77,152,675 77,154,117 Zm00001d029602 lbd6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 78,655,181 78,656,079 GRMZM2G076327 lbd7 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 124,634,056 124,634,920 Zm00001d030364 lbd7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 126,597,854 126,599,207 GRMZM2G132667 lbd8 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 191,562,085 191,562,888 Zm00001d031544 lbd8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 193,781,401 193,782,215 AC217910.3_FG006 lbd9 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 217,326,067 217,327,326 Zm00001d032286 lbd9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 220,463,004 220,464,263 GRMZM6G851663 lbp1 Forestan et al., 2016 Chr2 58,076,051 58,076,601 GRMZM2G128929 ldh1 from: Z11754 Chr5 67,432,367 67,434,244 Zm00001d014944 ldh1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 69,327,618 69,329,422 GRMZM2G106613 ldp1 from: W21755 Chr3 154,702,548 154,712,172 Zm00001d042212 ldp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 156,127,890 156,138,007 GRMZM2G011789 lec1 Classical Gene Chr5 204,386,830 204,388,007 GRMZM2G011789 lec1 in silico, MS 2011 Chr5 204,386,830 204,388,007 Zm00001d017898 lec1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 209,724,572 209,725,408 GRMZM2G174883 leg1 from BT042037 Chr6 40,050,689 40,052,652 Zm00001d035700 leg1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 41,696,312 41,698,431 AC234157.1_FG002 lem1 Classical Gene Chr1 281,175,269 281,177,006 Zm00001d034192 lem1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 286,208,841 286,210,899 GRMZM2G044074 les22 Classical Gene Chr1 56,560,198 56,564,777 GRMZM2G044074 les22 Chr1 56,560,198 56,564,777 Zm00001d029074 les22 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 57,250,815 57,254,236 GRMZM2G036297 lg1 Classical Gene Chr2 4,265,163 4,268,840 Zm00001d002005 lg1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 4,230,854 4,234,535 GRMZM2G060216 lg2 Classical Gene Chr3 176,845,304 176,853,978 GRMZM2G060216 lg2 Chr3 176,845,304 176,853,978 Zm00001d042777 lg2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 179,387,727 179,396,447 GRMZM2G087741 lg3 Classical Gene Chr3 53,883,227 53,893,066 GRMZM2G087741 lg3 Chr3 53,883,227 53,893,066 Zm00001d040611 lg3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 53,767,845 53,777,713 GRMZM2G094241 lg4 alignment to AF457120 sequence accession (Mar 2012) Chr8 130,383,323 130,388,890 GRMZM2G094241 lg4 Classical Gene Chr8 130,383,323 130,388,890 Zm00001d010948 lg4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 134,760,586 134,766,141 GRMZM2G134382 lgn1 Moon et al, 2013 Chr9 47,658,297 47,660,713 Zm00001d045945 lgn1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 48,527,705 48,530,228 GRMZM2G038519 lhca1 from: Entrez Gene 100191715 Chr2 207,611,861 207,618,663 Zm00001d006663 lhca1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 213,805,344 213,811,979 GRMZM2G351977 lhcb1 Classical Gene Chr8 141,176,051 141,177,936 Zm00001d011285 lhcb1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 145,825,712 145,826,506 AC207722.2_FG009 lhcb2 Classical Gene Chr7 147,094,052 147,095,217 Zm00001d021435 lhcb2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 152,283,433 152,284,280 GRMZM2G155216 lhcb3 Classical Gene Chr8 70,312,571 70,314,733 Zm00001d009589 lhcb3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 71,899,226 71,900,023 GRMZM2G103101 lhcb4 from: T18807 Chr5 209,922,350 209,924,302 Zm00001d018157 lhcb4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 215,693,591 215,695,288 GRMZM2G149428 lhcb5 Chr2 220,058,172 220,060,652 Zm00001d007267 lhcb5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 226,141,607 226,143,698 GRMZM2G092427 lhcb6 from: U23190 Chr10 147,325,724 147,327,040 Zm00001d026599 lhcb6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 148,715,856 148,717,059 GRMZM2G402936 lhcb7 Classical Gene Chr6 165,101,052 165,102,377 Zm00001d039040 lhcb7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 169,030,660 169,031,891 GRMZM2G018627 lhcb9 lhcb9 or umc1383 Chr1 247,817,664 247,819,376 GRMZM2G414192 lhcb9 lhcb9 or umc1383 Chr1 247,786,586 247,788,296 Zm00001d033132 lhcb9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 251,722,257 251,723,494 Zm00001d033136 lhcb9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 251,754,657 251,755,894 GRMZM2G474769 lhy1 Ko et al, 2016 Chr10 78,333,991 78,337,257 Zm00001d024546 lhy1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 77,700,138 77,703,390 GRMZM2G033519 lim432 Chr1 52,527,412 52,539,244 Zm00001d028975 lim432 Chr1 53,393,407 53,405,238 GRMZM2G128206 limtf1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 38,621,379 38,628,799 Zm00001d028550 limtf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 38,975,759 38,978,074 GRMZM2G004959 limtf10 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 21,973,369 21,975,498 Zm00001d035304 limtf10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 20,284,434 20,286,443 GRMZM2G017845 limtf11 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 52,901,117 52,909,594 Zm00001d035844 limtf11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 55,321,293 55,329,245 GRMZM2G010960 limtf12 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 114,357,794 114,367,987 Zm00001d037252 limtf12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 118,129,957 118,140,120 GRMZM2G151934 limtf13 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 140,469,500 140,474,431 Zm00001d047837 limtf13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 142,882,570 142,887,070 GRMZM2G024887 limtf14 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 132,724,522 132,726,075 Zm00001d025926 limtf14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 133,898,724 133,900,553 GRMZM2G160198 limtf2 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 39,040,586 39,044,425 Zm00001d028567 limtf2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 39,386,655 39,389,622 GRMZM2G385236 limtf3 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 123,983,180 123,985,570 GRMZM2G099328 limtf4 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 167,019,236 167,024,935 Zm00001d030953 limtf4 Chr1 168,697,730 168,709,504 GRMZM2G342105 limtf5 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 253,827,545 253,837,409 Zm00001d033297 limtf5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 258,038,207 258,048,636 GRMZM2G153268 limtf6 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 23,758,072 23,759,626 Zm00001d002844 limtf6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 24,434,066 24,435,780 GRMZM2G175761 limtf7 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 134,641,615 134,643,267 Zm00001d041725 limtf7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 135,291,605 135,293,112 GRMZM2G134752 limtf8 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 147,679,277 147,680,759 Zm00001d051262 limtf8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 151,028,968 151,030,729 GRMZM2G170034 limtf9 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 188,946,269 188,947,853 Zm00001d017382 limtf9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 193,930,984 193,932,787 GRMZM2G448607 lip15 Chr6 24,280,540 24,281,904 Zm00001d035440 lip15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 25,657,757 25,658,164 GRMZM2G181362 lkrsdh1 Classical Gene Chr4 175,769,672 175,780,762 Zm00001d052079 lkrsdh1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 178,764,555 178,775,799 GRMZM2G339563 lls1 Classical Gene Chr1 10,090,835 10,095,173 GRMZM2G339563 lls1 Chr1 10,090,835 10,095,173 Zm00001d027656 lls1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 10,261,506 10,265,855 GRMZM2G169089 ln1 allelism with dgat1 (Classical Gene from: EU039830) Chr6 105,027,581 105,034,465 Zm00001d036982 ln1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 108,212,462 108,219,350 GRMZM2G109560 lon1 Chr7 143,360,732 143,369,569 Zm00001d021301 lon1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 148,264,574 148,273,453 GRMZM2G113056 lon2 Chr7 174,539,360 174,548,995 Zm00001d022560 lon2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 180,055,178 180,064,698 GRMZM2G072886 lop1 Classical Gene & from: L14271 Chr9 117,765,965 117,767,293 Zm00001d047135 lop1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 119,578,065 119,583,754 GRMZM2G156861 lox1 Classical Gene Chr3 168,738,873 168,882,335 Zm00001d042541 lox1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 171,421,717 171,425,401 GRMZM2G015419 lox10 Christensen et al., 2015 Chr4 234,164,919 234,168,681 Zm00001d053675 lox10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 238,805,319 238,809,230 GRMZM2G009479 lox11 from: DQ335769 Chr5 123,239,668 123,243,697 Zm00001d015852 lox11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 126,372,618 126,376,084 GRMZM2G106748 lox12 from: DQ335770 Chr3 93,841,905 93,845,764 Zm00001d041204 lox12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 105,356,377 105,359,732 GRMZM5G822593 lox13 Chr1 188,148,388 188,153,483 Zm00001d031449 lox13 Chr1 190,316,537 190,321,767 Zm00001d042540 lox2 Chr3 171,277,704 171,281,453 GRMZM2G109130 lox3 Classical Gene Chr1 264,266,381 264,271,190 Zm00001d033623 lox3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 269,047,817 269,052,874 GRMZM2G109056 lox4 from: DQ335762 Chr1 264,275,083 264,291,510 Zm00001d033624 lox4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 269,056,560 269,072,120 GRMZM2G102760 lox5 from: DQ335763 Chr5 12,285,656 12,290,564 Zm00001d013493 lox5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 12,701,180 12,706,156 GRMZM2G040095 lox6 from: DQ335764 Chr2 4,192,152 4,196,263 Zm00001d002000 lox6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 4,150,293 4,154,404 GRMZM2G070092 lox7 from: DQ335765 Chr10 120,237,308 120,241,527 Zm00001d025524 lox7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 121,268,606 121,272,616 GRMZM2G017616 lox9 from Cell Genomics project (10-2013) Chr1 16,573,827 16,580,722 Zm00001d027893 lox9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 16,948,608 16,955,122 GRMZM2G155242 lpa1 Classical Gene Chr1 25,282,951 25,287,161 GRMZM2G155242 lpa1 Chr1 25,282,951 25,287,161 Zm00001d028180 lpa1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 25,632,515 25,636,718 GRMZM2G456626 lpa2 Classical Gene Chr1 101,838,959 101,841,220 GRMZM2G456626 lpa2 Chr1 101,838,959 101,841,220 Zm00001d030083 lpa2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 104,172,633 104,173,661 GRMZM2G361593 lpa3 from AY772410 Chr1 273,963,482 273,967,146 Zm00001d033929 lpa3 Chr1 278,737,384 278,740,927 GRMZM5G858417 lpe1 Belcher et al., 2015 Chr1 263,063,356 263,068,441 Zm00001d033585 lpe1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 267,905,764 267,909,606 GRMZM2G064750 lrk1 Chr8 9,630,289 9,634,061 Zm00001d008489 lrk1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 10,002,314 10,006,242 GRMZM2G077752 lrp1 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 157,286,610 157,288,482 Zm00001d011843 lrp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 162,564,729 162,565,898 AC232238.2_FG004 lrs1 from: AY180107; assigned by the Grassius project, (Yilmaz et al 2009) to bzip90 Chr8 166,341,735 166,349,613 Zm00001d012294 lrs1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 172,035,363 172,043,591 GRMZM2G153393 ltk1 Chr1 17,640,006 17,655,596 Zm00001d027934 ltk1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 17,945,836 17,961,550 GRMZM2G330907 ltk2 Chr9 150,263,840 150,275,563 Zm00001d048247 ltk2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 153,133,300 153,141,644 GRMZM2G320373 ltp1 Forestan et al., 2016 Chr6 162,859,289 162,860,116 GRMZM2G361398 lug1 Li et al., 2016 Chr3 224,206,634 224,220,693 GRMZM2G079013 lug2 Li et al., 2016 Chr5 215,387,951 215,401,364 Zm00001d018460 lug2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 221,195,976 221,208,870 GRMZM2G036169 lug3 Li et al., 2016 Chr1 300,351,265 300,364,771 Zm00001d034929 lug3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 305,907,516 305,922,174 GRMZM2G097640 lug4 Li et al., 2016 Chr1 233,885,155 233,892,825 GRMZM2G037683 lug5 Chr3 58,295,849 58,307,713 Zm00001d040689 lug5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 58,288,839 58,305,955 GRMZM2G149708 lug6 Li et al., 2016 Chr2 105,360,159 105,380,776 GRMZM2G111247 lug7 Li et al., 2016 Chr4 36,237,183 36,244,148 GRMZM2G061186 lug8 Li et al., 2016 Chr6 8,382,834 8,403,391 GRMZM2G027059 lw1 Based on data for zb7 from Lu et al. 2012 Chr1 273,003,521 273,007,187 Zm00001d033896 lw1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 277,726,512 277,729,830 GRMZM2G012966 lyce1 Classical Gene Chr8 138,416,903 138,424,121 GRMZM2G012966 lyce1 Transcript 03 seems to be the correct one for lyce1. Transcript 01 appears to be associated with some other gene product. Chr8 138,416,903 138,424,121 Zm00001d011210 lyce1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 143,020,695 143,027,838 AC195147.3_FG001 mab1 Juranic et al., 2012 Chr7 168,147,615 168,148,658 GRMZM2G154437 mab10 Juranic et al., 2012 Chr2 273,517 274,882 GRMZM2G077428 mab11 Juranic et al., 2012 Chr1 246,318,002 246,319,761 GRMZM2G181276 mab12 Juranic et al., 2012 Chr1 262,061,380 262,063,351 GRMZM2G027688 mab13 Juranic et al., 2012 Chr1 239,162,396 239,163,906 GRMZM2G052985 mab14 Juranic et al., 2012 Chr2 235,827,342 235,833,741 GRMZM2G148213 mab15 Juranic et al., 2012 Chr7 170,591,410 170,601,470 GRMZM2G172210 mab16 Juranic et al., 2012 Chr2 215,193,244 215,198,622 GRMZM2G166049 mab17 Juranic et al., 2012 Chr5 4,571,239 4,574,942 GRMZM2G060765 mab18 Juranic et al., 2012 Chr1 286,737,004 286,741,315 GRMZM2G074323 mab19 Juranic et al. 2012 Chr7 8,066,461 8,071,872 GRMZM2G404188 mab2 Juranic et al., 2012 Chr1 191,709,343 191,710,638 GRMZM2G009724 mab20 Juranic et al., 2012 Chr9 110,588,223 110,590,058 GRMZM2G109738 mab21 Juranic et al., 2012 Chr7 32,747,039 32,748,599 GRMZM2G046238 mab22 Juranic et al., 2012 Chr10 17,890,884 17,892,278 GRMZM2G143782 mab23 Juranic et al. 2012 Chr6 93,484,977 93,486,919 GRMZM2G103251 mab24 Juranic et al., 2012 Chr6 93,500,453 93,502,316 GRMZM2G088086 mab25 Juranic et al., 2012 Chr6 93,605,547 93,607,608 GRMZM2G161610 mab26 Juranic et al., 2012 Chr6 93,653,946 93,656,228 GRMZM2G161569 mab27 Juranic et al., 2012 Chr10 66,779,201 66,780,619 GRMZM2G041963 mab28 Juranic et al., 2012 Chr10 66,889,695 66,890,958 GRMZM2G077951 mab29 Juranic et al., 2012 Chr10 94,602,802 94,605,162 GRMZM2G337139 mab3 Juranic et al., 2012 Chr1 191,652,759 191,653,770 Zm00001d031549 mab3 Chr1 193,854,782 193,874,626 GRMZM2G319215 mab30 Juranic et al., 2012 Chr1 252,199,381 252,201,244 Zm00008a006240 mab31 PH207 chr2 7,994,778 7,995,320 GRMZM2G081441 mab4 Juranic et al., 2012 Chr4 42,393,046 42,394,177 GRMZM2G372171 mab5 Juranic et al., 2012 Chr4 42,424,938 42,426,486 GRMZM2G125162 mab6 Juranic et al., 2012 Chr4 42,454,238 42,456,109 GRMZM2G110531 mab7 Juranic et al., 2012 Chr1 240,647,475 240,649,230 GRMZM2G418031 mab8 Juranic et al., 2012 Chr5 33,629,741 33,631,155 GRMZM2G574887 mab9 Juranic et al., 2012 Chr4 5,470,074 5,471,217 GRMZM2G027522 mac1 Chr10 14,913,865 14,916,717 Zm00001d023681 mac1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 15,208,539 15,211,365 GRMZM2G171365 mads1 Classical Gene Chr9 154,082,657 154,102,449 Zm00001d048474 mads1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 156,960,598 156,980,213 GRMZM2G472100 mads13 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 21,134,716 21,135,537 Zm00001d019213 mads13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 22,103,625 22,104,431 GRMZM2G337892 mads17 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 207,704,174 207,705,556 Zm00001d006668 mads17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 213,897,891 213,899,273 GRMZM2G316366 mads19 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 177,268,178 177,269,968 GRMZM2G492156 mads19 Chen et al., 2014 Chr5 177,275,445 177,279,005 Zm00001d016957 mads19 v4; merges two v3 gene models Chr5 181,259,012 181,273,855 GRMZM2G137387 mads20 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 217,863,477 217,870,145 Zm00001d018587 mads20 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 223,789,445 223,791,111 AC233912.1_FG001 mads21 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 19,993,628 19,995,763 Zm00001d019189 mads21 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 20,850,901 20,853,619 GRMZM2G052045 mads22 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 214,460,902 214,461,626 Zm00001d032218 mads22 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 217,578,240 217,578,964 GRMZM2G099408 mads25 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 6,442,913 6,443,786 Zm00001d048894 mads25 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 7,243,833 7,244,576 GRMZM2G044408 mads26 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 204,799,296 204,799,985 Zm00001d017932 mads26 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 210,273,759 210,285,475 GRMZM2G135018 mads27 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 33,471,001 33,472,629 Zm00001d003168 mads27 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 34,340,843 34,342,956 GRMZM2G128953 mads28 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 138,090,540 138,096,148 Zm00001d047742 mads28 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 140,438,118 140,443,638 GRMZM2G072582 mads3 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 2,065,444 2,076,981 Zm00001d018667 mads3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 2,191,954 2,203,098 GRMZM2G069370 mads30 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 119,044,582 119,046,541 Zm00001d025479 mads30 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 120,092,000 120,093,934 GRMZM2G105387 mads32 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 38,790,111 38,793,001 Zm00001d049692 mads32 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 40,462,578 40,464,305 GRMZM2G459864 mads33 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 69,143,279 69,144,043 Zm00001d024389 mads33 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 68,369,718 68,370,476 GRMZM2G137510 mads34 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 17,785,901 17,791,457 Zm00001d023736 mads34 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 18,031,501 18,037,018 GRMZM2G079727 mads36 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 201,371,185 201,375,806 Zm00001d043589 mads36 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 204,487,153 204,491,765 GRMZM2G334225 mads38 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 112,393,075 112,399,500 Zm00001d037212 mads38 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 116,059,964 116,066,361 GRMZM2G055782 mads39 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 126,011,254 126,012,505 Zm00001d050897 mads39 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 128,983,979 129,000,129 GRMZM2G032339 mads4 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 277,218,151 277,298,925 Zm00001d034045 mads4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 282,136,174 282,165,980 GRMZM2G441115 mads40 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 2,892,328 2,894,627 Zm00001d048697 mads40 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 3,464,266 3,467,995 GRMZM2G018589 mads41 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 170,408,317 170,413,958 Zm00001d042591 mads41 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 172,998,409 173,003,728 GRMZM2G375707 mads42 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 142,010,577 142,012,164 Zm00001d011323 mads42 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 146,669,804 146,671,210 GRMZM2G001139 mads43 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 155,471,127 155,475,291 Zm00001d011748 mads43 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 160,706,837 160,710,739 GRMZM2G117961 mads45 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 3,237,228 3,240,201 Zm00001d035053 mads45 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 3,271,721 3,274,263 GRMZM2G306610 mads46 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 40,959,292 40,960,647 Zm00001d009198 mads46 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 42,153,439 42,154,794 GRMZM2G099577 mads47 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 70,600,799 70,601,941 Zm00001d046053 mads47 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 60,326,844 60,327,584 GRMZM2G148220 mads48 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 193,288,684 193,293,762 Zm00001d031591 mads48 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 195,617,659 195,621,721 GRMZM2G038878 mads50 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 108,882,764 108,883,558 Zm00001d037126 mads50 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 113,374,115 113,374,909 GRMZM2G161666 mads51 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 93,656,696 93,658,911 Zm00001d047355 mads51 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 127,411,002 127,422,090 GRMZM2G446426 mads52 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 191,720,338 191,722,587 Zm00001d052648 mads52 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 195,797,119 195,798,103 GRMZM2G035092 mads53 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 168,968,579 168,969,501 Zm00001d042550 mads53 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 171,520,606 171,521,172 GRMZM2G320549 mads54 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 19,792,210 19,807,087 Zm00001d039913 mads54 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 19,194,748 19,210,804 GRMZM2G137289 mads55 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 127,959,457 127,959,975 Zm00001d041587 mads55 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 128,474,269 128,474,787 GRMZM2G470857 mads57 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 19,431,756 19,432,706 GRMZM2G073357 mads58 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 141,270,744 141,271,664 Zm00001d038015 mads58 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 145,193,067 145,193,978 AC234185.1_FG006 mads59 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 72,172,257 72,173,003 Zm00001d009628 mads59 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 73,835,260 73,836,112 GRMZM2G152415 mads60 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 5,512,084 5,517,672 Zm00001d044850 mads60 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 5,086,712 5,091,020 GRMZM5G878490 mads62 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 234,414,387 234,415,043 Zm00001d007891 mads62 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 241,885,780 241,886,358 GRMZM2G032905 mads63 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 42,386,298 42,388,815 Zm00001d003409 mads63 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 43,566,862 43,569,682 GRMZM5G853066 mads64 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 19,800,106 19,800,942 Zm00001d013792 mads64 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 20,265,968 20,266,804 AC212823.4_FG003 mads65 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 167,376,720 167,382,187 Zm00001d016650 mads65 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 171,256,543 171,262,010 GRMZM5G839969 mads66 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 172,002,654 172,003,517 Zm00001d016791 mads66 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 176,044,354 176,045,217 GRMZM2G147716 mads67 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 164,451,097 164,456,819 Zm00001d022088 mads67 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 169,844,061 169,849,722 GRMZM2G059102 mads68 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 17,964,695 17,986,258 Zm00001d027957 mads68 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 18,299,864 18,321,135 GRMZM2G171650 mads69 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 159,022,119 159,050,063 Zm00001d042315 mads69 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 160,591,489 160,591,701 GRMZM5G891280 mads70 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 165,738,341 165,739,291 Zm00001d039080 mads70 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 169,689,637 169,690,380 GRMZM2G110582 mads71 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 78,317,642 78,332,274 Zm00001d046323 mads71 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 80,353,775 80,367,413 GRMZM2G046885 mads73 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 209,573,312 209,581,383 Zm00001d018142 mads73 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 215,341,246 215,348,037 GRMZM5G814279 mads74 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 7,111,132 7,121,722 Zm00001d044899 mads74 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 6,706,712 6,706,927 GRMZM2G472096 mads75 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 21,145,677 21,146,564 Zm00001d019214 mads75 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 22,114,577 22,115,458 GRMZM2G070034 mads76 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 125,606,160 125,639,409 Zm00001d047356 mads76 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 127,436,185 127,437,918 GRMZM2G098986 mads77 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 194,482,102 194,488,891 Zm00001d031625 mads77 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 196,773,083 196,773,325 GRMZM2G005155 mads9 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 10,371,800 10,374,751 GRMZM2G479245 maf1 Chr9 147,736,551 147,737,374 GRMZM2G102183 mas1 from: Entrez Gene 542252 Chr2 36,945,679 36,948,155 Zm00001d003247 mas1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 37,815,902 37,818,424 GRMZM5G870170 mate1 from B73_v2 alignment to sequence accession FJ015157 (MS Mar 2013) Chr6 5,869,544 5,874,565 Zm00001d035115 mate1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 5,904,499 5,909,575 GRMZM2G170128 mate2 from B73_v2 alignment to sequence accession FJ873684 Chr5 20,622,821 20,626,799 Zm00001d013810 mate2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 21,182,817 21,186,548 GRMZM2G163154 mate3 Guimaraes et al., 2014 Chr1 27,099,590 27,103,458 Zm00001d028228 mate3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 27,284,568 27,293,763 GRMZM2G080450 mate4 Guimaraes et al., 2014 Chr3 57,084,587 57,091,384 Zm00001d040665 mate4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 57,044,875 57,051,682 GRMZM5G890665 mate5 Guimaraes et al., 2014 Chr2 153,549,513 153,553,629 Zm00001d005080 mate5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 157,613,247 157,617,354 GRMZM2G065154 mate6 Guimaraes et al., 2014 Chr5 71,724,077 71,731,917 Zm00001d015060 mate6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 73,779,553 73,787,141 GRMZM2G471240 matl1 Kelliher et al., 2017 Chr1 68,248,585 68,250,379 Zm00001d029412 matl1 Chr1 69,428,973 69,430,785 GRMZM2G040131 mbd101a from: AY029556 Chr8 106,608,894 106,621,408 Zm00001d010322 mbd101a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 109,537,444 109,549,673 GRMZM2G069254 mbd101b from AY029556 (chr 6 hit) Chr6 146,224,513 146,226,056 Zm00001d038164 mbd101b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 150,068,990 150,075,970 GRMZM2G476933 mbd105 from: AY029558 Chr3 88,540,265 88,546,003 Zm00001d041290 mbd105 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 110,647,125 110,652,889 GRMZM2G022365 mbd106 Chr1 175,322,304 175,330,120 Zm00001d031101 mbd106 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 177,235,739 177,243,001 GRMZM2G168269 mbd108 Chr7 134,171,280 134,175,278 Zm00001d020975 mbd108 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 138,262,824 138,266,459 GRMZM2G112679 mbd109 from: AF527618 Chr5 16,320,354 16,321,171 GRMZM2G025095 mbd111 Chr2 191,314,651 191,336,825 Zm00001d006046 mbd111 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 196,379,947 196,403,384 GRMZM2G126545 mbd113 Chr10 105,058,169 105,069,085 Zm00001d025128 mbd113 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 105,638,368 105,648,955 GRMZM2G157470 mbd115 from: AY863051 Chr1 250,122,582 250,128,271 Zm00001d033204 mbd115 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 254,163,170 254,168,845 GRMZM2G048411 mbd117 Chr2 188,802,765 188,808,500 Zm00001d005958 mbd117 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 193,814,484 193,820,330 GRMZM2G301098 mbd119 Chr1 182,446,629 182,451,070 GRMZM2G119802 mbd123 Chr10 141,516,809 141,520,645 Zm00001d026288 mbd123 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 142,887,361 142,891,016 GRMZM2G101480 mbf1 Classical Gene Chr4 24,639,257 24,642,130 Zm00001d049320 mbf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 26,180,699 26,183,398 GRMZM2G518638 mc1 from alignment of AF371262 | gi 16305110to B73_v2 Chr2 183,992,102 183,992,798 GRMZM2G161299 mcf1 from Zallot et al 2013 Chr5 152,470,618 152,479,871 Zm00001d016299 mcf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 156,137,453 156,146,644 GRMZM2G420119 mcf2 from Zallot et al 2013 Chr8 139,126,558 139,129,894 Zm00001d011226 mcf2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 143,745,669 143,749,054 GRMZM2G069762 mch2 Chr4 108,571,396 108,574,204 Zm00001d000120 mch2 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73V4_ctg142 542,642 545,404 GRMZM2G065205 mcm1 Chr1 147,093,833 147,098,733 GRMZM2G112074 mcm2 Studer et al., 2017 Chr3 129,069,035 129,073,470 GRMZM2G066101 mcm4 Chr3 227,500,472 227,505,486 GRMZM2G075978 mcm5 Chr5 213,893,289 213,897,966 GRMZM2G021069 mcm6 Chr8 110,042,600 110,048,912 GRMZM2G139894 mcm7 Chr4 18,610,095 18,616,542 GRMZM2G155281 mde1 from: T14784 Chr2 69,807,566 69,810,549 Zm00001d003945 mde1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 71,037,398 71,040,700 GRMZM2G154595 mdh2 Classical Gene Chr6 165,831,537 165,836,297 Zm00001d039089 mdh2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 169,782,693 169,787,367 GRMZM2G466833 mdh3 from: EU963335 Chr3 213,978,038 213,986,724 Zm00001d044042 mdh3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 217,573,164 217,581,039 GRMZM2G415359 mdh4 Classical Gene Chr1 231,398,148 231,403,913 Zm00001d032695 mdh4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 234,902,658 234,908,089 GRMZM2G129513 mdh6 from Cell Genomics Project (Oct 2013) Chr1 203,209,824 203,213,983 Zm00001d031899 mdh6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 205,992,135 205,996,030 GRMZM2G122479 me2 from B73_V2 alignment to cDNA U399958 Chr6 139,464,390 139,470,075 GRMZM2G085019 me3 Classical Gene Chr3 7,276,387 7,281,737 Zm00001d000316 me3 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73V4_ctg89 18,903 24,123 GRMZM2G118770 me4 from: AJ224847 Chr8 174,612,565 174,617,106 Zm00001d012764 me4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 180,332,662 180,336,615 GRMZM2G122479 me5 from B73_V2 alignment to cDNA U39958 Chr6 139,464,390 139,470,075 Zm00001d037962 me5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 143,657,539 143,663,237 GRMZM2G159724 me6 from: BT055901 Chr3 201,756,751 201,761,835 Zm00001d043601 me6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 204,885,503 204,890,587 GRMZM5G835542 mecs1 Owens et al., 2014 Chr4 155,857,959 155,859,966 AC209374.4_FG002 mecs2 Owens et al., 2014 Chr5 196,331,063 196,332,805 Zm00001d017608 mecs2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 201,460,778 201,462,840 GRMZM2G354335 meg1 Classical Gene Chr7 13,073,446 13,074,744 GRMZM2G086827 meg10 Xiong et al., 2014 Chr7 12,673,702 12,674,015 GRMZM2G181051 meg11 Xiong et al., 2014 Chr7 12,626,477 12,627,199 GRMZM2G175896 meg12 Xiong et al., 2014 Chr7 12,531,786 12,532,621 GRMZM2G175912 meg13 Xiong et al., 2014 Chr7 12,484,473 12,485,342 Zm00001d019019 meg13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 12,903,625 12,904,375 GRMZM2G145466 meg14 Xiong et al., 2014 Chr7 13,178,054 13,178,841 Zm00001d019033 meg14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 13,643,510 13,644,343 GRMZM2G137959 meg15 Xiong et al., 2014 Chr7 12,591,109 12,591,978 GRMZM2G088896 meg2 from: BT068231 Chr7 12,676,389 12,677,577 Zm00001d019030 meg2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 13,540,226 13,541,566 GRMZM2G344323 meg3 from: Entrez Gene 100101508 Chr7 12,776,201 12,779,156 Zm00001d019027 meg3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 13,225,864 13,228,929 GRMZM5G896560 meg4 from: AY536124 Chr7 39,888,296 39,889,211 Zm00001d019541 meg4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 41,463,182 41,464,232 GRMZM2G094054 meg6 Xiong et al., 2014 Chr7 12,709,254 12,710,092 GRMZM2G116212 meg7 Xiong et al., 2014 Chr7 13,003,435 13,004,149 Zm00001d019029 meg7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 13,463,976 13,469,499 GRMZM2G123153 meg8 Xiong et al., 2014 Chr7 12,859,255 12,859,461 GRMZM2G502035 meg9 Xiong et al., 2014 Chr7 12,752,035 12,752,664 GRMZM2G167856 mek1 from sequence U83625 Chr3 201,966,295 201,973,589 Zm00001d043609 mek1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 205,101,695 205,107,235 GRMZM2G333916 met1 Classical Gene Chr7 11,133,095 11,139,492 GRMZM2G333916 met1 from: Li et al., 2014; ; aligns best with reference sequence AF229183 Chr7 11,133,095 11,139,492 Zm00001d018977 met1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 11,464,692 11,479,268 GRMZM2G025592 met2 From sequence homology to Genbank accession NM_001111508.1 Chr10 141,612,636 141,620,390 Zm00001d026291 met2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 142,982,967 142,990,366 GRMZM2G092497 met3 was gene model GRMZM2G092545 on RefGen_v1 corresponds to the gene model GRMZM2G092497 on RefGen_v2 Chr9 154,729,337 154,755,677 Zm00001d048516 met3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 157,632,076 157,656,040 GRMZM2G157589 met4 Entrez Gene Chr8 142,201,711 142,206,667 Zm00001d011329 met4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 146,863,198 146,868,117 GRMZM2G005310 met5 from: AY027539 Chr2 10,343,925 10,353,440 Zm00001d002330 met5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 10,460,528 10,470,318 GRMZM2G065599 met6 Li et al., 2014 Chr8 129,490,869 129,493,053 GRMZM2G137366 met7 Chr1 2,930,055 2,935,014 Zm00001d027329 met7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 3,031,993 3,036,913 GRMZM2G334041 met8 from: AY093415, AF063403 & Li et al., 2014 Chr7 11,151,804 11,157,815 GRMZM2G157820 mez1 Classical Gene Chr6 79,622,840 79,633,054 Zm00001d036296 mez1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 82,463,657 82,474,161 GRMZM5G875502 mez2 Chr9 135,509,551 135,524,285 Zm00001d047636 mez2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 137,787,062 137,801,220 GRMZM2G043484 mez3 from Entrez Gene 541955 Chr1 49,403,087 49,413,070 Zm00001d028890 mez3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 49,809,777 49,823,368 EF517601.1_FG016 mfs18 Chr3 34,681,198 34,681,584 Zm00001d040260 mfs18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 34,385,034 34,385,420 GRMZM2G161310 mfsd1 Chr3 45,563,077 45,577,326 Zm00001d040468 mfsd1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 45,120,037 45,134,869 GRMZM5G877788 mfsd2 from: AY104766 Chr4 186,656,010 186,660,015 Zm00001d052434 mfsd2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 189,873,712 189,877,696 GRMZM2G317406 mgs1 Classical Gene Chr10 111,861,870 111,862,808 Zm00001d025287 mgs1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 112,727,580 112,728,092 GRMZM2G080056 mgs2 from Entrez Gene 542245 Chr4 231,421,874 231,423,870 Zm00001d053597 mgs2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 235,911,860 235,913,945 GRMZM2G323418 mgs3 from: BT055324 Chr9 20,163,896 20,165,966 Zm00001d000216 mgs3 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73V4_ctg129 204,285 205,601 GRMZM2G108477 mgt1 Li et al., 2016 Chr9 104,353,895 104,357,808 Zm00001d000430 mgt1 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73V4_ctg68 40,310 44,234 GRMZM2G018706 mgt10 Li et al., 2016 Chr1 8,348,905 8,351,557 Zm00001d027582 mgt10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 8,373,817 8,376,354 GRMZM2G054632 mgt11 Li et al., 2016 Chr10 116,913,274 116,917,658 Zm00001d025416 mgt11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 117,962,173 117,964,181 GRMZM2G420436 mgt12 Li et al., 2016 Chr1 260,979,921 260,988,130 Zm00001d033527 mgt12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 265,735,700 265,743,684 GRMZM2G170326 mgt2 Li et al., 2016 Chr6 95,771,854 95,778,367 Zm00001d036714 mgt2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 98,440,958 98,447,412 GRMZM2G064467 mgt3 Li et al., 2016 Chr2 32,222,808 32,227,738 Zm00001d003125 mgt3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 33,105,163 33,110,061 GRMZM2G145794 mgt4 Li et al., 2016 Chr9 126,705,574 126,709,100 Zm00001d047388 mgt4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 128,467,682 128,470,763 GRMZM2G159295 mgt5 Li et al., 2016 Chr1 275,052,382 275,058,949 Zm00001d033969 mgt5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 279,877,087 279,883,538 GRMZM2G453832 mgt6 Li et al., 2016 Chr1 85,998,310 86,001,537 Zm00001d029808 mgt6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 87,835,101 87,838,643 GRMZM2G458879 mgt7 Li et al., 2016 Chr2 51,802,797 51,804,523 Zm00001d003666 mgt7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 53,218,426 53,220,162 GRMZM2G065971 mgt8 Li et al., 2016 Chr8 162,836,382 162,842,987 Zm00001d012102 mgt8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 168,283,208 168,289,577 GRMZM2G139822 mgt9 Li et al., 2016 Chr3 164,927,197 164,941,379 Zm00001d042441 mgt9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 167,523,894 167,537,970 GRMZM2G144821 mha1 from: U09989 Chr2 233,155,669 233,160,713 Zm00001d007775 mha1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 239,388,885 239,393,934 GRMZM2G019404 mha2 Classical Gene Chr2 4,305,357 4,312,971 Zm00001d002006 mha2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 4,277,523 4,284,581 GRMZM2G104325 mha3 originally associated with mha1, but that is on chr 2 Chr7 14,468,797 14,474,919 Zm00001d019062 mha3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 14,880,511 14,886,995 GRMZM2G006894 mha4 Chr10 145,614,824 145,621,943 Zm00001d026490 mha4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 146,954,113 146,960,946 GRMZM2G150276 mir1 Classical Gene Chr6 89,072,247 89,074,183 Zm00001d036542 mir1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 91,512,193 91,513,831 GRMZM2G150256 mir2 from: BT040644 Chr6 89,066,267 89,071,191 Zm00001d036541 mir2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 91,506,006 91,510,877 GRMZM2G166281 mir3 alignment to sequence AF019147.1 GI:2425065 Chr2 5,275,102 5,279,397 Zm00001d002065 mir3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 5,233,170 5,237,006 GRMZM2G090087 mis1 Chr6 161,650,053 161,657,588 Zm00001d038841 mis1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 165,629,567 165,639,979 GRMZM2G173660 mis12a from: FJ971487 Chr10 147,960,260 147,963,853 Zm00001d026640 mis12a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 149,269,862 149,271,718 GRMZM2G049495 mis12b from: FJ971488; GRMZM2G127481 on RefGen_v1 corresponds to the gene model GRMZM2G049495 on RefGen_v2 Chr2 1,049,355 1,141,492 Zm00001d001798 mis12b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 1,081,627 1,084,219 GRMZM5G867568 mkk3 from JN972438.1 on B73_V2 Chr3 111,094,841 111,094,990 GRMZM5G878379 mkk4 from: GU942956 Chr5 212,702,420 212,703,869 Zm00001d018326 mkk4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 218,492,798 218,493,868 GRMZM2G180555 mkkk10 from Kong et al 2013 Chr9 141,628,047 141,638,073 Zm00001d047875 mkkk10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 144,021,986 144,032,236 GRMZM2G066120 mkkk11 from Kong et al 2013 Chr1 37,470,728 37,476,121 Zm00001d028514 mkkk11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 37,841,039 37,846,575 GRMZM2G305066 mkkk18 from Kong et al 2013 Chr8 152,510,200 152,511,639 Zm00001d011655 mkkk18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 157,649,540 157,650,979 GRMZM2G089159 mkkk27 from Kong et al 2013 Chr2 207,080,135 207,083,546 Zm00001d006644 mkkk27 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 213,304,600 213,307,872 GRMZM2G045366 mkkk47 from Kong et al 2013 Chr3 197,586,815 197,591,360 Zm00001d043459 mkkk47 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 200,575,782 200,580,113 GRMZM2G019434 mkkk51 from Kong et al 2013 Chr1 171,553,382 171,558,256 Zm00001d031014 mkkk51 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 173,441,034 173,445,839 GRMZM2G088299 mkkk55 from Kong et al 2013 Chr3 215,295,086 215,300,436 Zm00001d044091 mkkk55 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 218,831,924 218,837,312 GRMZM2G152889 mkkk63 from Kong et al 2013 Chr3 142,725,252 142,734,848 Zm00001d041918 mkkk63 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 143,615,485 143,625,037 GRMZM2G096475 mlg3 Classical Gene Chr6 162,162,303 162,163,681 Zm00001d038870 mlg3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 166,160,261 166,161,550 GRMZM2G032219 mlo1 from: Entrez Gene 542672 Chr1 6,227,483 6,231,125 Zm00001d027486 mlo1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 6,310,322 6,313,633 GRMZM2G040441 mlo2 from: Entrez Gene 542061 Chr1 84,547,891 84,553,701 Zm00001d029768 mlo2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 86,261,116 86,266,872 GRMZM2G031331 mlo3 from: Entrez Gene 542508 Chr2 47,067,541 47,072,637 Zm00001d003569 mlo3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 48,390,876 48,396,098 GRMZM2G089259 mlo4 Chr4 207,435,849 207,441,283 Zm00001d053065 mlo4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 211,838,548 211,843,655 GRMZM2G471142 mlo5 from: BT039054 Chr3 169,916,619 169,920,590 Zm00001d042578 mlo5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 172,481,064 172,485,130 GRMZM2G325653 mlo6 from: Entrez Gene 542064 Chr5 64,702,557 64,709,182 Zm00001d014874 mlo6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 66,662,043 66,664,946 GRMZM2G416887 mlo7 from: Entrez Gene 542673 Chr9 103,186,013 103,204,159 Zm00001d046781 mlo7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 105,685,188 105,703,639 GRMZM5G881803 mlo8 from: Entrez Gene 542065 Chr6 147,620,043 147,639,499 Zm00001d038205 mlo8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 151,484,233 151,503,688 GRMZM2G051974 mlo9 from: BT040335 Chr2 1,273,216 1,278,753 Zm00001d001804 mlo9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 1,251,628 1,257,162 GRMZM2G015219 mmp135 Chr1 22,887,707 22,892,411 Zm00001d028114 mmp135 Chr1 23,265,205 23,270,017 GRMZM2G075247 mmp173 Chr1 222,450,586 222,455,100 Zm00001d032408 mmp173 Chr1 225,781,323 225,785,475 GRMZM2G115635 mmp189 Chr1 219,115,789 219,119,954 Zm00001d032322 mmp189 Chr1 222,263,901 222,267,470 GRMZM2G084940 mmp23 Chr1 51,316,436 51,326,657 Zm00001d028926 mmp23 Chr1 51,754,552 51,764,566 GRMZM2G076468 mmp39 Chr1 94,827,883 94,830,005 Zm00001d029970 mmp39 Chr1 97,044,621 97,046,748 GRMZM2G123585 mmp61 Chr1 90,332,252 90,338,675 Zm00001d029888 mmp61 Chr1 92,327,821 92,333,275 GRMZM2G073591 mmp66 Chr1 37,319,479 37,323,563 Zm00001d028512 mmp66 Chr1 37,678,345 37,682,334 GRMZM2G424020 mmp68 Chr1 14,112,283 14,115,901 Zm00001d027815 mmp68 Chr1 14,329,827 14,333,803 GRMZM2G087918 mmp93 Chr1 10,220,690 10,229,909 Zm00001d027659 mmp93 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 10,349,113 10,358,254 GRMZM2G119689 mn1 Classical Gene Chr2 57,435,843 57,439,124 Zm00001d003776 mn1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 58,876,332 58,879,327 GRMZM2G042443 mop1 Classical Gene Chr2 41,131,324 41,136,928 GRMZM2G042443 mop1 Chr2 41,131,324 41,136,928 Zm00001d003378 mop1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 42,148,337 42,154,340 GRMZM2G053987 mpk1 from AB016801 Chr9 138,684,018 138,689,891 Zm00001d047758 mpk1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 141,026,557 141,029,745 GRMZM2G062914 mpk14 alignment of DQ295030 and AY105935 to B73_v2 Chr5 79,898,949 79,904,417 Zm00001d015269 mpk14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 82,143,688 82,149,070 GRMZM2G020216 mpk2 from AB016802 Chr9 18,879,527 18,885,415 Zm00001d045310 mpk2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 18,782,254 18,788,548 GRMZM2G017792 mpk3 B73_v2 alignment to EU130900 Chr1 43,690,126 43,693,022 Zm00001d028711 mpk3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 43,908,553 43,911,257 GRMZM2G089484 mpk6 from BT060960 Chr10 88,695,003 88,700,854 Zm00001d024807 mpk6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 88,836,429 88,842,405 GRMZM2G002100 mpk7 from BT040404 Chr6 74,762,186 74,767,526 Zm00001d036215 mpk7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 77,510,982 77,515,737 GRMZM2G152827 mpt1 Chr5 210,195,424 210,200,092 Zm00001d018183 mpt1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 215,965,775 215,970,551 GRMZM2G106056 mre11a from: ABQ59303 (Sidhu et al., 2017) Chr2 6,993,096 7,000,975 GRMZM2G309109 mre11b from Cell Genomics Project (Oct 2013) Chr4 29,935,686 29,941,454 Zm00001d049471 mre11b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 31,448,746 31,454,292 GRMZM2G111306 mrp1 Classical Gene Chr8 127,960,823 127,962,081 Zm00001d010889 mrp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 132,313,361 132,314,587 GRMZM2G113203 mrpa1 from: Entrez Gene 100037760 Chr9 58,021,949 58,028,182 Zm00001d046226 mrpa1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 73,244,262 73,250,675 GRMZM5G832772 mrpa2 Chr7 123,394,542 123,423,972 Zm00001d020666 mrpa2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 127,315,049 127,322,067 GRMZM2G111903 mrpa3 Classical Gene Chr9 17,746,515 17,758,407 Zm00001d045269 mrpa3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 17,510,977 17,523,858 GRMZM5G820122 mrpa4 from: CS229842 Chr1 9,298,049 9,301,828 Zm00001d027625 mrpa4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 9,346,098 9,353,496 GRMZM2G142870 mrpa6 from: EU950350 Chr8 45,267,687 45,282,726 Zm00001d009243 mrpa6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 46,518,330 46,532,634 GRMZM5G830695 mrpa7 Chr3 11,403,408 11,407,172 Zm00001d039653 mrpa7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 10,752,207 10,756,034 GRMZM2G139160 mrpi1 from: FM252125 Chr8 171,358,270 171,363,973 Zm00001d012605 mrpi1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 177,084,651 177,090,378 GRMZM2G105224 mrpi2 Chr3 190,121,699 190,124,115 Zm00001d043243 mrpi2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 192,962,985 192,965,166 GRMZM5G830329 ms10 Somaratne et al.,2016 Chr10 84,622,439 84,624,344 Zm00001d024712 ms10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 84,554,486 84,559,654 GRMZM2G442791 ms22 from homology to GN051196 Chr7 5,333,364 5,334,245 Zm00001d018802 ms22 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 5,664,064 5,664,543 GRMZM2G021276 ms23 Nan et al., 2016; assigned by the Grassius project, (Yilmaz et al 2009) Chr8 95,823 98,367 Zm00001d008174 ms23 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 256,295 258,840 GRMZM2G091822 ms26 Classical Gene Chr1 14,505,716 14,508,042 Zm00001d027837 ms26 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 14,702,216 14,704,540 GRMZM2G163233 ms32 Moon et al., 2013; bhlh66 locus assigned by the Grassius project, (Yilmaz et al 2009); same as assigned to ms32 (Moon et al, 2013) Chr2 205,125,283 205,135,718 Zm00001d006565 ms32 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 211,028,281 211,035,348 AC225127.3_FG003 ms44 Fox et al., 2017 Chr4 195,238,767 195,239,581 Zm00001d052736 ms44 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 199,343,999 199,344,667 GRMZM2G307906 ms45 Classical Gene Chr9 141,198,898 141,203,399 Zm00001d047859 ms45 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 143,633,531 143,636,108 GRMZM5G890224 ms7 Zhang et al., 2017 Chr7 123,885,131 123,886,963 Zm00001d020680 ms7 v4 Chr7 127,860,533 127,863,145 GRMZM2G119265 ms8 Wang et al., 2013 Chr8 164,959,333 164,961,811 Zm00001d012234 ms8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 170,600,288 170,602,763 GRMZM2G308034 ms9 from: sequence in Albertsen et al., 2016 Chr1 45,942,719 45,945,140 Zm00001d028777 ms9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 46,189,691 46,192,097 GRMZM2G057450 msf1 Chr4 2,116,635 2,122,723 Zm00001d048655 msf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 2,668,192 2,674,113 GRMZM2G036217 msh1 Chr4 52,923,800 52,927,833 Zm00001d049950 msh1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 55,129,672 55,133,478 GRMZM2G089308 msrb2 Olukolu, BA et al. 2016 Chr8 107,317,423 107,322,839 Zm00001d010336 msrb2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 110,250,082 110,255,517 GRMZM2G110185 mss1 from: BT042297 Chr5 212,423,808 212,427,681 Zm00001d018309 mss1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 218,238,432 218,242,413 GRMZM2G135739 mstr1 from: AY683004 Chr7 1,232,553 1,236,835 Zm00001d018627 mstr1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 1,335,710 1,339,124 GRMZM2G141034 mstr2 from: AY683005 Chr4 29,873,533 29,875,971 Zm00001d049467 mstr2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 31,378,981 31,380,525 GRMZM2G034061 mstr4 Chr9 115,519,260 115,524,432 Zm00001d000183 mstr4 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73V4_ctg181 307,491 312,293 GRMZM2G090422 mta1 Classical Gene Chr1 277,805,915 277,807,951 Zm00001d034059 mta1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 282,747,831 282,749,777 GRMZM2G168665 mterf1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 62,678,623 62,679,874 Zm00001d029242 mterf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 63,479,560 63,480,471 GRMZM2G177019 mterf10 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 125,764,251 125,766,015 Zm00001d041537 mterf10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 126,166,316 126,167,305 GRMZM2G023257 mterf11 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 164,545,324 164,547,139 Zm00001d042436 mterf11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 167,171,083 167,172,249 GRMZM2G113181 mterf12 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 40,732,037 40,733,517 Zm00001d049743 mterf12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 42,447,381 42,459,199 GRMZM2G312806 mterf13 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 125,520,897 125,522,276 Zm00001d050886 mterf13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 128,466,573 128,467,412 GRMZM2G000610 mterf14 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 175,942,990 175,945,922 Zm00001d052081 mterf14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 178,936,233 178,939,151 GRMZM2G119921 mterf15 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 97,211,503 97,213,224 Zm00001d015585 mterf15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 99,710,472 99,711,659 GRMZM2G395850 mterf16 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 160,553,137 160,554,858 GRMZM2G024550 mterf17 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 181,938,089 181,940,862 Zm00001d017130 mterf17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 186,476,548 186,479,329 GRMZM2G017355 mterf18 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 207,946,920 207,948,448 Zm00001d018065 mterf18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 213,694,436 213,695,611 GRMZM2G017429 mterf19 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 207,948,915 207,950,416 Zm00001d018066 mterf19 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 213,696,372 213,697,544 GRMZM2G061542 mterf2 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 191,096,212 191,098,816 Zm00001d031533 mterf2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 193,316,763 193,318,712 GRMZM2G158854 mterf20 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 208,026,456 208,027,062 GRMZM2G161146 mterf21 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 208,983,535 208,985,153 Zm00001d018124 mterf21 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 214,730,366 214,731,481 GRMZM2G012999 mterf22 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 145,978,354 145,980,232 Zm00001d038158 mterf22 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 149,857,328 149,858,539 GRMZM2G426154 mterf23 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 4,125,505 4,128,341 GRMZM2G175930 mterf24 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 4,166,250 4,167,474 Zm00001d018756 mterf24 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 4,290,052 4,307,739 GRMZM2G142150 mterf25 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 145,340,020 145,344,782 Zm00001d021376 mterf25 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 150,246,031 150,250,848 GRMZM2G062910 mterf26 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 149,471,798 149,473,953 Zm00001d021513 mterf26 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 154,682,758 154,684,482 GRMZM2G325350 mterf27 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 107,021,009 107,022,559 Zm00001d010329 mterf27 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 109,953,875 109,955,137 GRMZM2G068462 mterf29 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 149,784,489 149,785,027 GRMZM2G034217 mterf3 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 247,924,596 247,928,127 Zm00001d033138 mterf3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 251,842,429 251,846,045 GRMZM2G157716 mterf30 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 128,351,184 128,353,531 Zm00001d047442 mterf30 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 130,336,965 130,337,861 GRMZM2G054517 mterf32 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 293,596,590 293,597,275 GRMZM2G044832 mterf33 from protein sequence NP_001152154.1 Chr4 72,413,770 72,415,391 Zm00001d050234 mterf33 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 75,106,267 75,107,484 GRMZM2G029933 mterf4 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 107,478,416 107,481,820 Zm00001d010340 mterf4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 110,435,824 110,437,308 GRMZM2G159766 mterf5 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 293,884,036 293,885,697 Zm00001d034669 mterf5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 299,321,980 299,323,654 GRMZM2G170137 mterf6 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 296,849,440 296,855,068 Zm00001d034784 mterf6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 302,249,936 302,255,526 GRMZM2G087679 mterf7 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 200,677,205 200,677,752 GRMZM2G060114 mterf8 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 206,785,654 206,788,258 Zm00001d006629 mterf8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 212,952,452 212,953,621 GRMZM2G130773 mterf9 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 208,493,066 208,496,996 Zm00001d006700 mterf9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 214,673,600 214,677,670 GRMZM2G164229 mtl1 from: X82186 - low confidence overlaps with AC188003.3_FG012, GRMZM2G164225, AC188003.3_FG011, GRMZM2G415161, and GRMZM2G308369 Chr4 1,078,840 1,080,800 GRMZM2G402564 mtl2 from: Z34469 Chr1 84,824,229 84,824,959 Zm00001d029778 mtl2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 86,529,694 86,530,424 GRMZM2G099340 mtl3 Chr3 17,614,009 17,614,990 GRMZM2G009070 murE1 from: AFW87925 Chr9 117,602,450 117,606,164 Zm00001d047128 murE1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 119,414,807 119,418,522 GRMZM2G056075 mus1 Chr7 162,805,707 162,815,421 Zm00001d022028 mus1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 168,269,022 168,278,683 GRMZM2G110212 mus2 from: AJ238787 Chr3 9,425,062 9,436,121 Zm00001d039596 mus2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 8,649,713 8,661,900 GRMZM2G421541 mus3 Chr7 110,073,686 110,083,762 Zm00001d020424 mus3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 113,218,224 113,228,485 GRMZM2G082264 mwp1 Classical Gene Chr7 107,261,176 107,267,803 Zm00001d020384 mwp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 110,525,083 110,531,709 GRMZM2G102790 myb1 from AF474115 Chr6 57,696,052 57,697,795 GRMZM2G395672 myb10 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 152,307,135 152,308,035 Zm00001d011645 myb10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 157,426,995 157,428,942 GRMZM2G143046 myb100 Chr1 148,636,099 148,638,077 Zm00001d030644 myb100 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 150,483,395 150,485,385 GRMZM2G425427 myb101 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 85,332,939 85,334,512 Zm00001d024725 myb101 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 85,285,499 85,286,719 GRMZM2G392823 myb102 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 24,562,822 24,564,246 Zm00001d013931 myb102 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 25,111,416 25,112,574 GRMZM2G111045 myb103 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 147,942,670 147,945,039 GRMZM2G105137 myb104 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 20,746,096 20,747,513 Zm00001d002750 myb104 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 21,406,606 21,408,172 GRMZM2G031323 myb105 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 157,205,480 157,207,019 Zm00001d021761 myb105 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 162,527,404 162,529,059 GRMZM2G048910 myb106 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 118,137,380 118,139,235 Zm00001d037334 myb106 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 121,922,624 121,924,231 GRMZM2G172575 myb107 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 2,635,968 2,636,971 Zm00001d023287 myb107 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 2,216,330 2,217,229 GRMZM2G011422 myb108 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 68,821,398 68,822,736 Zm00001d050185 myb108 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 71,478,007 71,479,474 GRMZM2G052606 myb109 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 28,608,735 28,611,473 Zm00001d023931 myb109 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 29,359,954 29,360,247 GRMZM2G000818 myb11 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 176,175,338 176,183,379 Zm00001d022628 myb11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 181,720,257 181,728,090 GRMZM2G176327 myb110 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 218,127,126 218,128,844 Zm00001d007191 myb110 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 224,248,136 224,249,179 GRMZM2G115859 myb111 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 183,375,901 183,377,379 Zm00001d005784 myb111 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 188,225,506 188,227,001 GRMZM5G803308 myb112 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 97,396,868 97,398,308 Zm00001d046632 myb112 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 99,815,018 99,815,932 GRMZM2G090837 myb113 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 164,905,509 164,906,823 Zm00001d005307 myb113 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 168,964,648 168,965,706 GRMZM2G151205 myb114 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 155,174,836 155,176,075 Zm00001d011739 myb114 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 160,432,796 160,433,990 GRMZM2G423833 myb115 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 89,300,616 89,303,600 Zm00001d000361 myb115 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73V4_ctg115 46,043 53,651 GRMZM2G343068 myb116 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 91,094,278 91,096,039 Zm00001d036577 myb116 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 93,494,411 93,496,100 GRMZM2G470307 myb117 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 2,100,964 2,106,267 Zm00001d039306 myb117 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 1,424,835 1,430,811 GRMZM2G160840 myb118 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 127,632,800 127,634,389 Zm00001d041580 myb118 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 128,152,758 128,154,332 AC213884.3_FG002 myb119 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 140,735,955 140,737,064 Zm00001d037994 myb119 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 144,651,004 144,652,113 GRMZM2G104789 myb12 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 5,492,315 5,496,291 Zm00001d013164 myb12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 5,673,628 5,677,335 GRMZM2G054111 myb120 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 9,210,655 9,212,108 Zm00001d027623 myb120 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 9,256,393 9,258,054 GRMZM2G147346 myb121 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 231,339,380 231,341,787 Zm00001d032694 myb121 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 234,842,943 234,845,229 GRMZM2G416652 myb122 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 91,044,353 91,053,527 Zm00001d046517 myb122 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 93,396,849 93,405,759 GRMZM2G172487 myb123 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 2,629,931 2,630,888 Zm00001d023284 myb123 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 2,210,289 2,211,146 GRMZM2G003406 myb124 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 153,001,174 153,002,887 GRMZM2G079123 myb125 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 213,964,635 213,966,254 Zm00001d032206 myb125 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 217,042,533 217,044,651 GRMZM2G001223 myb126 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 177,037,863 177,039,897 Zm00001d016952 myb126 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 181,022,647 181,024,609 GRMZM2G369799 myb127 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 143,516,968 143,518,615 Zm00001d041935 myb127 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 144,357,752 144,358,546 GRMZM2G017520 myb128 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 48,494,886 48,497,275 Zm00001d040527 myb128 Chr3 48,286,239 48,288,111 GRMZM2G070523 myb129 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 20,219,035 20,221,972 GRMZM2G038722 myb13 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 13,306,159 13,307,935 Zm00001d002476 myb13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 13,590,866 13,592,608 GRMZM2G069325 myb130 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 163,187,174 163,188,702 Zm00001d038930 myb130 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 167,214,153 167,215,654 GRMZM2G001875 myb131 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 6,740,166 6,741,503 Zm00001d039496 myb131 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 5,913,103 5,914,797 AC206901.3_FG005 myb132 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 130,744,061 130,745,625 Zm00001d025864 myb132 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 131,914,989 131,917,182 GRMZM2G149958 myb133 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 1,678,831 1,682,752 Zm00001d001837 myb133 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 1,669,402 1,673,203 GRMZM2G001824 myb134 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 85,407,063 85,408,480 Zm00001d024726 myb134 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 85,360,224 85,361,291 GRMZM2G460869 myb136 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 43,581,101 43,582,165 Zm00001d040428 myb136 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 43,065,775 43,066,839 GRMZM2G162709 myb137 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 23,685,016 23,686,756 Zm00001d040019 myb137 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 23,109,131 23,110,862 GRMZM2G139688 myb138 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 187,060,539 187,064,561 GRMZM2G087955 myb139 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 164,459,324 164,461,196 Zm00001d005300 myb139 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 168,527,945 168,528,802 GRMZM2G172327 myb14 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 150,123,692 150,125,127 Zm00001d021537 myb14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 155,328,673 155,330,345 GRMZM2G117244 myb140 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 118,942,837 118,944,366 Zm00001d020569 myb140 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 122,618,970 122,620,761 GRMZM2G166337 myb141 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 205,695,705 205,697,501 Zm00001d006585 myb141 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 211,619,081 211,620,480 GRMZM2G055158 myb142 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 166,940,293 166,941,682 Zm00001d051788 myb142 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 169,863,214 169,864,538 GRMZM2G043792 myb144 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 140,905,500 140,906,629 Zm00001d051117 myb144 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 144,038,256 144,039,547 GRMZM2G158700 myb145 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 52,310,607 52,311,832 Zm00001d040594 myb145 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 52,179,189 52,180,100 GRMZM2G106558 myb146 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 215,390,233 215,391,851 Zm00001d032240 myb146 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 218,510,675 218,511,967 GRMZM2G330475 myb147 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 129,632,727 129,634,070 Zm00001d010933 myb147 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 134,043,470 134,044,573 GRMZM2G044824 myb148 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 26,643,904 26,645,305 Zm00001d045560 myb148 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 26,696,309 26,697,439 GRMZM2G127490 myb149 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 87,801,492 87,804,648 Zm00001d024784 myb149 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 87,973,477 87,976,336 GRMZM2G081919 myb15 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 180,868,369 180,880,014 Zm00001d042910 myb15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 183,711,436 183,723,137 GRMZM2G161512 myb150 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 41,714,515 41,716,637 Zm00001d014364 myb150 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 42,931,796 42,934,191 GRMZM2G167829 myb151 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 202,003,124 202,004,769 Zm00001d043611 myb151 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 205,136,822 205,138,473 GRMZM2G104551 myb152 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 143,239,537 143,250,321 Zm00001d021296 myb152 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 148,154,982 148,165,194 GRMZM2G050550 myb153 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 51,486,945 51,489,455 Zm00001d019712 myb153 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 53,178,504 53,179,541 GRMZM2G022686 myb154 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 136,428,923 136,433,765 Zm00001d047671 myb154 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 138,752,709 138,756,941 GRMZM2G150680 myb155 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 74,619,373 74,623,124 Zm00001d024488 myb155 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 73,839,384 73,843,136 GRMZM2G147698 myb156 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 64,243,765 64,245,594 Zm00001d029293 myb156 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 65,078,005 65,079,230 GRMZM2G073836 myb157 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 135,315,692 135,321,511 GRMZM2G078820 myb158 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 97,484,061 97,485,484 Zm00001d036768 myb158 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 100,159,664 100,160,590 GRMZM2G126566 myb159 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 108,815,110 108,818,213 Zm00001d020408 myb159 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 111,958,019 111,961,171 GRMZM2G015021 myb16 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 175,365,997 175,368,482 Zm00001d052069 myb16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 178,364,585 178,366,789 GRMZM2G302549 myb160 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 4,156,159 4,161,139 Zm00001d013070 myb160 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 4,264,331 4,269,310 GRMZM2G088189 myb161 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 69,331,089 69,332,668 Zm00001d014989 myb161 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 71,262,940 71,264,436 GRMZM2G045748 myb162 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 112,497,750 112,499,904 Zm00001d020457 myb162 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 115,739,490 115,741,009 GRMZM2G405094 myb163 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 165,425,516 165,426,742 Zm00001d012255 myb163 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 171,085,931 171,087,013 GRMZM2G110135 myb164 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 182,569,440 182,570,779 Zm00001d031270 myb164 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 184,550,117 184,551,424 GRMZM2G089686 myb165 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 152,402,913 152,404,601 Zm00001d048383 myb165 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 155,286,842 155,288,530 GRMZM2G496770 myb166 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 147,813,432 147,816,122 Zm00001d051267 myb166 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 151,178,362 151,181,128 GRMZM2G037650 myb167 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 207,220,915 207,226,619 Zm00001d032032 myb167 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 209,992,350 209,997,511 GRMZM2G138427 myb17 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 216,738,472 216,740,213 Zm00001d053210 myb17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 220,292,682 220,295,236 GRMZM2G356718 myb18 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 281,831,441 281,837,582 GRMZM5G833253 myb19 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 157,794,216 157,795,479 Zm00001d051520 myb19 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 161,213,576 161,215,329 AC203535.4_FG001 myb2 Classical Gene Chr3 157,551,793 157,560,623 Zm00001d042287 myb2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 159,074,669 159,084,170 GRMZM2G052377 myb20 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 13,212,794 13,213,981 Zm00001d039700 myb20 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 12,503,835 12,504,977 GRMZM2G305856 myb21 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 34,889,113 34,891,065 Zm00001d035605 myb21 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 36,427,345 36,428,954 GRMZM2G096358 myb22 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 11,486,302 11,488,135 GRMZM2G150841 myb23 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 168,329,433 168,331,529 Zm00001d022259 myb23 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 173,850,976 173,853,082 GRMZM2G006352 myb24 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 150,874,045 150,875,425 Zm00001d011614 myb24 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 155,950,883 155,952,700 GRMZM2G431156 myb25 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 101,285,814 101,286,751 Zm00001d010201 myb25 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 103,881,482 103,882,231 GRMZM2G170049 myb26 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 188,966,583 188,971,226 Zm00001d017383 myb26 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 193,951,312 193,955,766 GRMZM2G064744 myb27 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 227,482,800 227,485,105 Zm00001d044538 myb27 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 231,309,779 231,312,054 GRMZM2G111117 myb28 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 82,918,804 82,920,269 GRMZM2G134279 myb29 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 134,045,064 134,047,281 Zm00001d047579 myb29 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 136,185,732 136,187,949 GRMZM2G099334 myb3 Chr5 167,471,479 167,473,890 Zm00001d016653 myb3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 171,349,333 171,350,583 GRMZM2G171781 myb30 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 128,605,416 128,608,501 Zm00001d010907 myb30 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 132,971,022 132,973,384 GRMZM2G050305 myb31 Chr2 196,943,580 196,945,201 Zm00001d006236 myb31 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 202,580,128 202,588,798 GRMZM2G160838 myb32 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 173,563,412 173,564,760 Zm00001d042665 myb32 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 175,964,663 175,965,738 GRMZM2G131937 myb33 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 212,948,280 212,949,607 GRMZM2G125522 myb34 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 178,602,360 178,604,208 Zm00001d042830 myb34 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 181,377,889 181,379,729 AC165178.2_FG004 myb35 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 182,073,111 182,074,488 Zm00001d005760 myb35 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 186,872,023 186,873,836 GRMZM2G169316 myb36 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 167,538,578 167,540,715 Zm00001d012379 myb36 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 173,237,609 173,239,733 GRMZM2G455869 myb37 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 10,183,391 10,185,240 Zm00001d013399 myb37 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 10,404,922 10,407,154 GRMZM2G084583 myb38 from Grassius Chr1 206,902,673 206,903,955 Zm00001d032024 myb38 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 209,721,047 209,722,443 GRMZM2G127857 myb39 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 142,662,999 142,664,773 Zm00001d051149 myb39 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 145,959,279 145,960,656 GRMZM2G131442 myb4 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 2,048,276 2,051,646 Zm00001d048647 myb4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 2,600,276 2,602,518 GRMZM2G051256 myb40 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 54,471,016 54,474,812 Zm00001d040621 myb40 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 54,361,997 54,365,806 GRMZM2G095904 myb41 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 186,464,058 186,465,312 Zm00001d017268 myb41 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 191,151,367 191,152,674 GRMZM2G419239 myb42 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 217,140,381 217,141,824 Zm00001d053220 myb42 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 220,717,445 220,718,702 GRMZM2G083239 myb43 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 43,407,839 43,409,117 Zm00001d040426 myb43 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 42,867,274 42,868,539 GRMZM2G111731 myb44 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 43,359,914 43,361,633 Zm00001d040423 myb44 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 42,817,665 42,819,244 GRMZM2G051793 myb45 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 4,708,398 4,726,962 Zm00001d018776 myb45 Chr7 4,961,661 4,980,931 GRMZM2G088783 myb47 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 204,223,730 204,225,741 GRMZM2G159547 myb48 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 208,398,128 208,399,748 GRMZM2G032655 myb49 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 42,399,734 42,402,189 Zm00001d003412 myb49 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 43,580,336 43,582,878 GRMZM2G097636 myb5 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 139,613,167 139,614,620 Zm00001d026203 myb5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 140,869,750 140,871,173 GRMZM2G145444 myb50 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 98,692,287 98,694,146 Zm00001d015614 myb50 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 101,152,012 101,152,926 GRMZM5G803355 myb51 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 138,430,393 138,432,531 Zm00001d041818 myb51 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 139,104,748 139,106,839 GRMZM2G098179 myb52 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 119,563,181 119,564,683 Zm00001d047182 myb52 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 121,102,734 121,104,079 GRMZM2G143328 myb53 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 215,930,994 215,932,039 GRMZM2G123202 myb54 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 23,621,911 23,623,663 Zm00001d002843 myb54 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 24,293,846 24,295,521 GRMZM2G130149 myb56 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 150,717,400 150,722,235 Zm00001d030678 myb56 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 152,667,851 152,669,369 GRMZM2G102790 myb57 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 57,696,052 57,697,795 AC217264.3_FG005 myb58 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 246,090,026 246,092,492 Zm00001d033075 myb58 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 249,662,821 249,664,552 GRMZM2G093789 myb59 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 89,403,121 89,416,241 Zm00001d036551 myb59 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 91,831,037 91,834,032 GRMZM2G047626 myb6 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 127,316,146 127,317,795 Zm00001d041576 myb6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 127,808,680 127,810,192 GRMZM2G312419 myb60 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 2,761,493 2,763,284 Zm00001d008251 myb60 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 2,928,345 2,930,423 GRMZM2G108959 myb61 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 211,371,663 211,373,398 Zm00001d053124 myb61 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 214,607,218 214,608,953 GRMZM2G013581 myb62 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 34,825,413 34,826,773 Zm00001d035604 myb62 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 36,325,267 36,326,373 GRMZM2G017268 myb63 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 197,249,760 197,251,014 Zm00001d052804 myb63 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 201,420,640 201,421,910 GRMZM2G124715 myb64 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 131,979,387 131,980,997 Zm00001d004744 myb64 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 135,504,533 135,506,004 GRMZM2G097638 myb65 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 139,616,209 139,617,701 Zm00001d026204 myb65 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 140,872,548 140,874,240 GRMZM2G169356 myb66 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 108,726,504 108,727,871 Zm00001d020405 myb66 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 111,820,330 111,821,428 GRMZM2G089244 myb67 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 207,043,753 207,046,336 Zm00001d053060 myb67 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 211,442,081 211,444,631 GRMZM2G311059 myb68 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 139,262,188 139,263,199 Zm00001d026186 myb68 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 140,542,121 140,544,170 AC197146.3_FG002 myb69 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 2,469,595 2,470,558 Zm00001d023282 myb69 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 2,048,298 2,049,531 GRMZM2G064630 myb7 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 213,301,143 213,305,674 Zm00001d006922 myb7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 219,448,057 219,452,768 GRMZM2G139284 myb70 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 213,409,017 213,410,688 GRMZM2G093647 myb71 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 140,863,600 140,864,545 Zm00001d037999 myb71 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 144,762,649 144,763,524 GRMZM2G048295 myb72 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 30,170,679 30,172,939 GRMZM2G121570 myb73 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 252,379,991 252,382,041 Zm00001d033265 myb73 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 256,498,470 256,500,905 GRMZM2G028054 myb74 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 170,725,034 170,728,865 Zm00001d012544 myb74 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 176,420,877 176,424,706 GRMZM2G070849 myb75 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 51,395,397 51,397,668 Zm00001d028930 myb75 Chr1 51,839,504 51,841,800 GRMZM2G143274 myb76 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 16,772,384 16,773,583 Zm00001d008695 myb76 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 17,318,353 17,319,271 GRMZM2G077147 myb77 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 269,707,858 269,709,728 Zm00001d033815 myb77 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 274,393,280 274,395,337 GRMZM2G428555 myb78 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 213,582,734 213,586,180 Zm00001d032194 myb78 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 216,643,340 216,646,707 GRMZM2G056986 myb79 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 167,004,561 167,005,794 Zm00001d012337 myb79 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 172,699,749 172,700,888 GRMZM2G041415 myb8 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 140,151,898 140,153,093 Zm00001d041853 myb8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 140,875,425 140,876,585 GRMZM5G870592 myb80 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 288,542,157 288,545,680 Zm00001d034467 myb80 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 293,829,659 293,833,423 GRMZM2G020772 myb81 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 19,005,064 19,007,583 Zm00001d039893 myb81 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 18,371,543 18,374,234 GRMZM2G167088 myb82 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 91,085,847 91,092,849 Zm00001d046518 myb82 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 93,438,079 93,444,871 GRMZM2G024468 myb83 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 212,890,592 212,892,164 Zm00001d032178 myb83 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 215,896,905 215,898,543 GRMZM2G173633 myb84 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 124,346,736 124,348,421 GRMZM2G077789 myb85 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 150,884,611 150,885,947 Zm00001d038338 myb85 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 154,811,648 154,812,744 GRMZM2G027697 myb86 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 185,547,753 185,549,361 Zm00001d017243 myb86 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 190,147,000 190,148,416 GRMZM2G004090 myb87 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 91,131,737 91,138,554 Zm00001d046519 myb87 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 93,484,168 93,490,984 GRMZM2G048136 myb88 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 1,269,236 1,270,429 GRMZM2G040924 myb89 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 189,017,104 189,019,282 Zm00001d017385 myb89 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 194,002,524 194,004,526 GRMZM2G081557 myb9 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 139,471,900 139,473,418 Zm00001d026197 myb9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 140,757,698 140,759,098 GRMZM2G047600 myb90 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 33,141,828 33,143,103 Zm00001d009066 myb90 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 34,057,004 34,057,960 GRMZM2G119693 myb91 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 63,068,162 63,069,647 Zm00001d009435 myb91 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 64,426,230 64,427,152 GRMZM2G325907 myb92 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 81,840,592 81,843,874 Zm00001d024630 myb92 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 81,140,535 81,143,186 GRMZM2G093660 myb93 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 140,832,154 140,833,178 Zm00001d037998 myb93 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 144,731,260 144,732,225 GRMZM2G051528 myb95 from: Entrez Gene 100037755; and assigned by the Grassius project, (Yilmaz et al 2009) Chr8 34,675,104 34,689,130 Zm00001d009088 myb95 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 35,616,440 35,617,907 GRMZM2G322490 myb96 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 40,556,783 40,558,240 Zm00001d009184 myb96 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 41,744,670 41,745,263 GRMZM2G046443 myb98 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 190,346,919 190,348,170 Zm00001d031515 myb98 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 192,483,919 192,484,951 GRMZM2G175232 myb99 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 162,305,213 162,306,663 Zm00001d038878 myb99 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 166,302,446 166,304,056 GRMZM2G477533 mybr10 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 20,943,684 20,945,224 Zm00001d049236 mybr10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 22,178,186 22,179,293 GRMZM5G833032 mybr100 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 196,333,385 196,347,387 Zm00001d017609 mybr100 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 201,463,285 201,477,308 GRMZM2G136887 mybr101 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 139,912,821 139,920,531 Zm00001d011252 mybr101 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 144,609,854 144,617,400 GRMZM2G129872 mybr102 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 48,011,049 48,012,183 GRMZM2G022499 mybr103 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 188,491,207 188,494,857 Zm00001d031454 mybr103 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 190,649,919 190,653,721 GRMZM2G023557 mybr104 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 299,468,335 299,469,321 Zm00001d034891 mybr104 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 304,942,283 304,943,362 GRMZM2G471039 mybr105 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 44,822,275 44,823,668 Zm00001d003496 mybr105 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 46,050,675 46,052,185 GRMZM2G129817 mybr106 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 7,149,223 7,161,457 Zm00001d013265 mybr106 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 7,397,790 7,408,662 GRMZM2G456960 mybr107 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 1,837,921 1,839,249 Zm00001d008229 mybr107 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 1,983,066 1,984,497 GRMZM2G304840 mybr108 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 149,181,160 149,185,462 GRMZM2G433450 mybr109 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 62,424,724 62,426,967 GRMZM2G071468 mybr11 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 192,547,214 192,555,085 Zm00001d017507 mybr11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 197,864,412 197,884,322 GRMZM2G443202 mybr110 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 221,293,909 221,300,124 Zm00001d044311 mybr110 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 224,969,472 224,970,756 GRMZM2G181030 mybr111 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 134,854,638 134,857,160 Zm00001d026017 mybr111 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 136,073,204 136,075,724 GRMZM2G370896 mybr112 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 96,553,982 96,582,581 Zm00001d010087 mybr112 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 98,849,846 98,862,302 GRMZM2G001106 mybr113 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 132,817,600 132,819,290 Zm00001d025930 mybr113 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 133,977,640 133,978,998 GRMZM2G119261 mybr114 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 113,806,626 113,816,795 Zm00001d004521 mybr114 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 116,470,474 116,480,753 GRMZM2G049378 mybr115 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 148,179,996 148,182,680 Zm00001d011515 mybr115 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 153,108,098 153,110,782 GRMZM5G847287 mybr116 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 194,297,473 194,298,570 Zm00001d006134 mybr116 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 199,512,791 199,513,658 GRMZM2G112263 mybr12 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 48,154,654 48,155,041 GRMZM2G091201 mybr13 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 149,547,176 149,548,435 Zm00001d038288 mybr13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 153,438,837 153,439,986 GRMZM2G340756 mybr14 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 139,757,841 139,764,438 Zm00001d041847 mybr14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 140,452,942 140,459,568 GRMZM2G048403 mybr15 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 210,149,799 210,173,485 Zm00001d032107 mybr15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 213,151,287 213,157,154 GRMZM2G382029 mybr16 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 8,495,835 8,497,325 GRMZM2G071977 mybr17 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 223,767,189 223,769,272 Zm00001d044409 mybr17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 227,433,298 227,435,079 GRMZM2G176568 mybr18 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 13,792,506 13,793,319 Zm00001d008601 mybr18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 14,158,249 14,159,062 GRMZM2G402156 mybr19 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 15,055,667 15,056,797 Zm00001d045162 mybr19 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 14,780,005 14,781,306 GRMZM2G400489 mybr2 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 824,954 835,548 Zm00001d008198 mybr2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 957,005 966,468 GRMZM2G421256 mybr20 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 14,726,120 14,728,827 Zm00001d002545 mybr20 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 15,128,166 15,131,434 GRMZM2G079458 mybr21 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 13,801,696 13,804,475 Zm00001d008602 mybr21 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 14,167,587 14,170,217 GRMZM2G468479 mybr22 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 6,089,921 6,097,881 Zm00001d039475 mybr22 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 5,284,136 5,296,963 GRMZM2G075064 mybr23 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 102,481,776 102,484,118 Zm00001d036883 mybr23 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 105,560,166 105,566,394 GRMZM2G049695 mybr24 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 20,520,277 20,522,116 Zm00001d008808 mybr24 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 21,238,766 21,240,538 GRMZM5G848185 mybr25 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 212,643,601 212,645,908 Zm00001d018320 mybr25 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 218,434,662 218,435,468 GRMZM2G112764 mybr26 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 85,321,554 85,325,088 Zm00001d024644 mybr26 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 81,909,922 81,912,952 GRMZM2G119133 mybr28 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 171,749,221 171,756,808 AC199820.4_FG006 mybr29 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 210,594,735 210,595,406 Zm00001d006791 mybr29 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 216,766,315 216,767,167 GRMZM2G002128 mybr3 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 149,021,224 149,023,568 Zm00001d038270 mybr3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 152,871,846 152,873,850 GRMZM2G169991 mybr30 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 32,103,896 32,105,382 Zm00001d019429 mybr30 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 33,320,576 33,321,683 GRMZM2G034110 mybr31 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 115,514,419 115,517,835 GRMZM2G088524 mybr32 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 94,375,921 94,377,959 Zm00001d029963 mybr32 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 96,573,408 96,575,415 GRMZM2G422083 mybr33 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 88,729,270 88,730,919 Zm00001d024810 mybr33 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 88,887,562 88,889,100 GRMZM2G101806 mybr34 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 24,642,311 24,643,851 Zm00001d049319 mybr34 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 26,178,971 26,180,511 GRMZM2G065829 mybr35 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 141,446,174 141,448,103 Zm00001d011297 mybr35 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 146,093,892 146,095,667 GRMZM2G014534 mybr36 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 13,349,180 13,350,397 Zm00001d002482 mybr36 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 13,635,509 13,636,726 GRMZM2G027914 mybr37 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 176,478,861 176,480,372 Zm00001d042756 mybr37 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 179,001,730 179,003,192 GRMZM2G059167 mybr38 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 115,304,028 115,319,510 Zm00001d016784 mybr38 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 175,783,136 175,790,708 GRMZM2G451116 mybr39 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 216,327,065 216,328,448 Zm00001d044118 mybr39 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 219,812,499 219,812,786 GRMZM2G032180 mybr4 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 152,273,149 152,273,832 Zm00001d005055 mybr4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 156,345,821 156,346,504 GRMZM2G088005 mybr40 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 19,456,504 19,458,038 GRMZM2G150260 mybr41 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 216,312,171 216,314,107 Zm00001d044117 mybr41 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 219,796,585 219,798,521 GRMZM2G369993 mybr42 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 155,061,845 155,063,380 Zm00001d030738 mybr42 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 156,958,973 156,962,027 GRMZM5G813892 mybr43 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 89,448,263 89,451,835 Zm00001d029875 mybr43 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 91,421,593 91,425,126 GRMZM2G016020 mybr44 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 48,014,364 48,015,108 GRMZM2G415077 mybr45 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 300,823,403 300,824,061 Zm00001d034945 mybr45 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 306,362,055 306,362,570 GRMZM2G005112 mybr46 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 179,262,685 179,263,682 Zm00001d042849 mybr46 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 182,051,853 182,052,850 GRMZM2G117497 mybr47 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 165,301,952 165,303,494 Zm00001d039049 mybr47 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 169,245,888 169,247,273 GRMZM2G175265 mybr48 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 78,356,797 78,358,456 Zm00001d024547 mybr48 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 77,722,777 77,724,235 GRMZM2G416708 mybr49 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 41,295,336 41,296,872 Zm00001d040385 mybr49 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 40,907,364 40,908,661 GRMZM2G401809 mybr5 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 211,646,121 211,647,607 Zm00001d006848 mybr5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 217,790,789 217,797,756 GRMZM2G337011 mybr50 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 9,316,108 9,317,023 Zm00001d002281 mybr50 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 9,495,581 9,496,234 GRMZM2G379167 mybr51 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 215,521,132 215,523,527 Zm00001d018465 mybr51 Chr5 221,328,960 221,335,180 GRMZM2G029850 mybr52 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 197,657,418 197,660,109 Zm00001d017642 mybr52 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 202,881,513 202,884,506 GRMZM2G047038 mybr53 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 270,191,276 270,202,265 Zm00001d033825 mybr53 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 274,885,788 274,896,921 GRMZM2G152319 mybr54 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 143,795,886 143,800,919 GRMZM2G143640 mybr55 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 166,202,168 166,203,590 Zm00001d012285 mybr55 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 171,871,807 171,872,971 GRMZM2G398758 mybr56 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 235,101,440 235,102,975 Zm00001d007883 mybr56 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 241,676,336 241,677,632 GRMZM2G139174 mybr57 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 166,438,508 166,439,034 Zm00001d039119 mybr57 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 170,394,361 170,395,337 GRMZM2G170322 mybr58 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 156,546,886 156,549,720 Zm00001d051480 mybr58 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 160,038,260 160,042,852 GRMZM2G085427 mybr59 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 32,374,231 32,382,033 Zm00001d028380 mybr59 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 32,678,385 32,692,019 GRMZM2G087817 mybr6 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 221,663,066 221,667,898 Zm00001d044330 mybr6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 225,344,316 225,349,224 GRMZM5G845296 mybr60 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 113,866,855 113,869,756 Zm00001d010472 mybr60 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 117,108,453 117,110,290 GRMZM2G139760 mybr61 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 208,030,163 208,035,544 Zm00001d000110 mybr61 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73V4_ctg52 187,964 193,349 GRMZM2G531738 mybr62 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 135,326,257 135,335,990 Zm00001d037836 mybr62 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 139,238,531 139,250,622 GRMZM2G447745 mybr63 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 26,908,013 26,915,169 Zm00001d035470 mybr63 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 28,271,626 28,278,463 GRMZM2G118693 mybr64 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 155,860,243 155,865,096 Zm00001d051458 mybr64 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 159,348,371 159,355,666 GRMZM2G546369 mybr65 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 144,803,533 144,808,264 Zm00001d026456 mybr65 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 146,121,659 146,122,160 GRMZM2G049194 mybr67 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 211,753,884 211,765,564 Zm00001d018258 mybr67 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 217,527,909 217,540,053 GRMZM2G410083 mybr68 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 129,607,133 129,610,574 Zm00001d025823 mybr68 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 130,739,138 130,741,408 GRMZM2G135052 mybr69 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 27,185,077 27,191,507 Zm00001d045581 mybr69 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 27,258,563 27,264,640 GRMZM2G071648 mybr70 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 100,111,985 100,113,471 GRMZM2G448104 mybr71 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 142,938,806 142,965,743 Zm00001d026362 mybr71 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 144,222,451 144,249,626 GRMZM2G700011 mybr72 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 137,511,121 137,512,076 Zm00001d047716 mybr72 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 139,846,485 139,847,439 GRMZM2G147152 mybr73 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 126,546,425 126,548,480 Zm00001d004681 mybr73 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 130,047,372 130,049,161 GRMZM2G073826 mybr74 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 135,342,824 135,344,111 Zm00001d016000 mybr74 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 138,562,425 138,590,869 GRMZM2G023667 mybr75 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 153,685,211 153,695,652 Zm00001d011692 mybr75 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 158,905,685 158,906,986 GRMZM2G301642 mybr76 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 45,267,830 45,269,717 Zm00001d040464 mybr76 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 44,811,230 44,812,811 GRMZM2G057408 mybr77 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 93,259,854 93,265,695 Zm00001d036632 mybr77 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 95,752,345 95,758,209 AC204212.4_FG001 mybr78 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 201,176,614 201,176,904 Zm00001d017782 mybr78 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 206,597,153 206,597,443 GRMZM2G177760 mybr8 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 62,405,348 62,407,503 GRMZM2G163291 mybr80 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 14,476,929 14,481,586 Zm00001d039750 mybr80 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 13,772,095 13,776,752 GRMZM2G121111 mybr81 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 88,764,345 88,765,689 Zm00001d024809 mybr81 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 88,853,062 88,854,141 GRMZM2G103783 mybr82 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 133,402,091 133,405,607 Zm00001d020947 mybr82 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 137,482,526 137,485,454 GRMZM2G098884 mybr83 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 30,961,505 30,976,774 Zm00001d049495 mybr83 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 32,390,178 32,404,793 GRMZM2G108892 mybr84 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 81,701,345 81,729,386 Zm00001d024627 mybr84 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 81,009,835 81,021,978 GRMZM2G089406 mybr85 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 130,868,798 130,875,685 Zm00001d010967 mybr85 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 135,268,693 135,275,891 GRMZM2G170148 mybr86 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 110,859,050 110,870,308 Zm00001d046974 mybr86 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 113,773,320 113,784,564 GRMZM2G158117 mybr87 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 70,808,377 70,809,767 Zm00001d009599 mybr87 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 72,403,032 72,404,407 GRMZM2G064328 mybr88 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 234,391,361 234,395,800 Zm00001d053687 mybr88 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 239,036,651 239,041,066 GRMZM2G121753 mybr89 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 211,692,320 211,693,746 Zm00001d043968 mybr89 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 215,274,473 215,277,881 GRMZM2G030403 mybr9 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 89,125,351 89,126,605 Zm00001d024814 mybr9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 89,275,166 89,276,263 GRMZM2G046438 mybr90 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 31,921,424 31,926,755 Zm00001d014117 mybr90 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 33,025,257 33,030,501 GRMZM2G111990 mybr91 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 48,136,700 48,137,829 GRMZM2G157306 mybr92 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 34,498,413 34,504,954 Zm00001d049581 mybr92 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 36,062,634 36,069,198 GRMZM2G135410 mybr93 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 37,825,696 37,830,335 GRMZM2G328814 mybr94 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 175,758,339 175,759,719 Zm00001d016914 mybr94 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 179,738,727 179,740,023 GRMZM2G115070 mybr95 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 300,879,227 300,880,127 Zm00001d034947 mybr95 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 306,417,787 306,418,293 GRMZM2G145041 mybr96 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 64,145,458 64,148,638 GRMZM2G057955 mybr97 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 218,099,741 218,101,238 Zm00001d044194 mybr97 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 221,629,262 221,630,634 GRMZM2G111906 mybr98 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 82,660,395 82,663,470 Zm00001d036356 mybr98 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 85,555,310 85,558,301 GRMZM2G024054 mybr99 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 21,005,810 21,011,591 Zm00001d013827 mybr99 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 21,505,251 21,508,854 GRMZM2G034110 mybst1 Chr9 115,514,419 115,517,835 Zm00001d000184 mybst1 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73V4_ctg181 314,008 317,339 GRMZM2G001930 myc7 assigned by the Grassius project, (Yilmaz et al 2009) to bhlh149 Chr1 98,363,081 98,365,897 Zm00001d030028 myc7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 100,650,752 100,652,869 AC155377.1_FG001 myo1 from: AF104924 Chr3 220,967,145 220,986,200 Zm00001d044303 myo1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 224,622,779 224,641,871 GRMZM2G034362 myo2 Chr5 215,754,092 215,764,902 GRMZM2G332687 myo2 Chr5 215,751,740 215,753,860 Zm00001d018481 myo2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 221,569,552 221,583,567 GRMZM2G113202 myo3 from: AF147738 Chr1 229,251,332 229,267,181 Zm00001d032637 myo3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 232,683,293 232,699,590 GRMZM2G449033 na1 based on GenBank NM_001156344 Chr3 179,041,147 179,042,863 Zm00001d042843 na1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 181,821,465 181,822,989 GRMZM2G057000 na2 Best et al., 2016 Chr5 65,138,723 65,143,833 Zm00001d014887 na2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 67,026,171 67,030,023 GRMZM2G096958 naat1 Chr4 220,114,792 220,118,307 Zm00001d053281 naat1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 223,892,837 223,896,295 GRMZM2G015605 nac1 Classical Gene Chr10 87,283,919 87,284,844 Zm00001d024778 nac1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 87,401,369 87,401,545 GRMZM2G134717 nactf1 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 149,342,434 149,343,235 Zm00001d011555 nactf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 154,368,362 154,374,551 GRMZM2G315140 nactf10 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 189,452,831 189,457,211 Zm00001d017396 nactf10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 194,479,238 194,479,983 AC211478.3_FG004 nactf100 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 141,524,464 141,524,928 Zm00001d041886 nactf100 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 142,368,826 142,369,290 GRMZM2G104078 nactf101 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 130,546,212 130,550,063 Zm00001d050960 nactf101 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 133,589,483 133,593,214 GRMZM5G894234 nactf102 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 146,509,128 146,512,839 AC212859.3_FG008 nactf103 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 26,370,683 26,372,492 Zm00001d002934 nactf103 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 27,119,340 27,120,568 GRMZM5G857701 nactf104 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 214,998,412 215,000,055 Zm00001d018435 nactf104 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 220,828,387 220,830,479 GRMZM2G123246 nactf105 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 38,574,124 38,577,183 Zm00001d049687 nactf105 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 40,262,262 40,265,308 GRMZM2G031120 nactf106 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 254,134,957 254,136,440 GRMZM2G172264 nactf107 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 98,794,488 98,795,642 Zm00001d010144 nactf107 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 101,257,298 101,258,431 GRMZM2G114850 nactf108 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 122,090,412 122,094,741 Zm00001d041472 nactf108 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 122,367,956 122,372,020 GRMZM2G014653 nactf109 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 170,863,580 170,866,035 Zm00001d042609 nactf109 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 173,458,717 173,460,818 GRMZM2G031001 nactf11 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 53,419,144 53,421,347 Zm00001d028995 nactf11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 54,034,211 54,036,320 GRMZM2G167018 nactf110 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 61,009,621 61,012,269 Zm00001d024268 nactf110 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 60,226,179 60,228,837 GRMZM2G450445 nactf111 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 38,182,053 38,187,930 Zm00001d003293 nactf111 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 39,094,599 39,100,476 GRMZM2G456568 nactf112 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 148,114,978 148,119,765 Zm00001d038227 nactf112 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 151,995,956 152,000,206 GRMZM2G063522 nactf113 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 43,445,603 43,449,974 Zm00001d014405 nactf113 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 44,701,128 44,705,362 GRMZM2G430522 nactf114 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 188,939,619 188,942,480 Zm00001d031463 nactf114 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 191,081,875 191,084,627 GRMZM2G069047 nactf115 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 38,060,800 38,063,263 Zm00001d049678 nactf115 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 39,731,374 39,733,815 GRMZM2G041746 nactf116 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 106,419,729 106,421,601 Zm00001d037029 nactf116 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 109,567,045 109,568,953 GRMZM2G163914 nactf117 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 28,857,463 28,862,279 Zm00001d045617 nactf117 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 28,909,570 28,912,421 GRMZM2G109627 nactf118 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 7,036,425 7,039,141 Zm00001d008399 nactf118 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 7,349,376 7,352,005 GRMZM2G393433 nactf119 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 16,291,317 16,293,647 Zm00001d035266 nactf119 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 18,673,737 18,675,956 GRMZM2G125777 nactf12 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 50,123,857 50,128,792 Zm00001d049913 nactf12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 52,248,471 52,252,923 AC233865.1_FG003 nactf121 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 146,634,161 146,635,852 Zm00001d021424 nactf121 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 151,795,011 151,797,484 GRMZM2G430849 nactf122 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 173,556,184 173,558,723 Zm00001d022424 nactf122 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 177,373,961 177,376,027 GRMZM2G092465 nactf123 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 4,308,720 4,311,321 Zm00001d035084 nactf123 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 4,344,874 4,346,980 GRMZM2G104074 nactf124 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 65,939,491 65,941,420 Zm00001d046126 nactf124 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 65,016,935 65,018,861 GRMZM2G123667 nactf125 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 208,153,304 208,156,017 Zm00001d000112 nactf125 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73V4_ctg52 346,937 349,561 GRMZM2G018436 nactf126 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 150,664,743 150,666,249 Zm00001d005028 nactf126 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 154,629,678 154,631,157 GRMZM2G389557 nactf127 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 63,305,824 63,308,265 Zm00001d014843 nactf127 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 65,146,662 65,147,468 GRMZM2G078954 nactf129 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 116,856,576 116,860,095 Zm00001d037315 nactf129 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 120,615,193 120,635,200 GRMZM2G038073 nactf13 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 180,419,619 180,423,120 Zm00001d017084 nactf13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 184,855,226 184,858,638 GRMZM2G154182 nactf130 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 7,300,179 7,302,179 Zm00001d008403 nactf130 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 7,619,712 7,621,282 GRMZM2G178998 nactf131 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 23,327,304 23,330,538 Zm00001d002828 nactf131 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 24,002,536 24,006,073 GRMZM2G179885 nactf132 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 158,275,103 158,277,300 Zm00001d021818 nactf132 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 163,653,395 163,655,534 GRMZM2G094067 nactf133 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 172,963,066 172,964,225 Zm00001d016814 nactf133 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 177,041,057 177,042,174 GRMZM2G163843 nactf134 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 150,104,921 150,106,384 Zm00001d011589 nactf134 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 155,137,898 155,138,968 GRMZM2G159094 nactf14 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 111,693,679 111,695,863 Zm00001d020446 nactf14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 114,913,228 114,914,695 GRMZM2G111770 nactf15 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 125,215,781 125,218,953 Zm00001d025684 nactf15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 126,186,003 126,189,175 GRMZM2G166721 nactf16 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 6,939,608 6,945,972 Zm00001d039506 nactf16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 6,101,834 6,112,905 GRMZM2G062009 nactf17 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 142,276,736 142,279,162 Zm00001d051140 nactf17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 145,569,635 145,572,065 GRMZM5G885329 nactf18 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 146,638,618 146,642,822 Zm00001d021423 nactf18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 151,788,597 151,792,933 GRMZM2G155816 nactf19 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 142,222,049 142,223,803 Zm00001d016119 nactf19 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 145,523,324 145,525,028 GRMZM2G181605 nactf2 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 173,780,290 173,782,115 Zm00001d022517 nactf2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 179,273,873 179,275,691 GRMZM2G180328 nactf20 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 148,062,214 148,064,233 Zm00001d038221 nactf20 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 151,942,943 151,944,950 GRMZM2G091490 nactf21 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 66,186,789 66,189,233 Zm00001d036050 nactf21 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 68,998,881 69,001,722 GRMZM2G156977 nactf22 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 9,417,298 9,419,858 Zm00001d002285 nactf22 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 9,589,202 9,591,738 GRMZM2G068973 nactf23 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 170,415,625 170,417,408 Zm00001d012527 nactf23 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 176,104,082 176,105,842 GRMZM2G008374 nactf24 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 191,504,046 191,505,927 Zm00001d006053 nactf24 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 196,582,504 196,584,317 GRMZM2G127379 nactf25 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 2,682,268 2,684,357 Zm00001d023294 nactf25 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 2,262,454 2,264,529 GRMZM2G113950 nactf26 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 170,273,726 170,278,146 Zm00001d051879 nactf26 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 173,236,782 173,241,210 GRMZM2G354151 nactf27 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 148,843,760 148,847,667 Zm00001d051294 nactf27 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 152,220,730 152,221,346 GRMZM2G033014 nactf28 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 2,720,485 2,721,893 Zm00001d018702 nactf28 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 2,762,860 2,763,807 GRMZM2G159500 nactf29 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 133,066,105 133,068,297 GRMZM2G147867 nactf3 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 147,704,754 147,707,417 Zm00001d038207 nactf3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 151,568,742 151,571,658 GRMZM2G146380 nactf30 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 176,985,518 176,986,621 Zm00001d016950 nactf30 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 180,967,088 180,968,694 GRMZM2G465835 nactf31 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 149,591,626 149,592,760 Zm00001d038289 nactf31 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 153,483,310 153,484,444 GRMZM2G009892 nactf32 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 42,514,433 42,516,336 Zm00001d003414 nactf32 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 43,705,185 43,706,945 GRMZM2G025642 nactf33 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 5,629,470 5,636,419 Zm00001d027459 nactf33 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 5,706,025 5,712,786 AC208663.3_FG002 nactf34 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 30,554,102 30,555,190 Zm00001d003080 nactf34 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 31,373,154 31,374,242 GRMZM2G179049 nactf35 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 193,103,406 193,105,706 Zm00001d006106 nactf35 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 198,198,555 198,200,085 GRMZM2G081930 nactf36 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 29,749,591 29,752,453 Zm00001d003052 nactf36 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 30,534,378 30,537,200 AC198937.4_FG005 nactf37 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 83,598,016 83,599,406 Zm00001d050410 nactf37 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 86,641,152 86,642,542 GRMZM2G104400 nactf38 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 102,056,994 102,060,989 Zm00001d010227 nactf38 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 104,776,612 104,781,353 GRMZM2G126817 nactf39 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 151,938,782 151,940,287 Zm00001d048347 nactf39 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 154,824,112 154,825,475 GRMZM2G079632 nactf4 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 20,903,390 20,905,225 Zm00001d019207 nactf4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 21,927,733 21,929,407 GRMZM5G898290 nactf40 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 125,797,543 125,799,275 Zm00001d050893 nactf40 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 128,778,456 128,780,327 GRMZM2G439903 nactf41 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 189,283,188 189,284,375 Zm00001d052564 nactf41 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 193,274,586 193,275,656 GRMZM2G074358 nactf42 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 82,927,597 82,929,052 Zm00001d036364 nactf42 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 85,809,798 85,811,340 GRMZM2G082709 nactf43 Chr1 98,104,945 98,106,412 Zm00001d030023 nactf43 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 100,385,980 100,387,952 GRMZM2G011598 nactf44 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 53,631,300 53,633,544 Zm00001d028999 nactf44 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 54,263,185 54,265,683 GRMZM2G126936 nactf45 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 146,100,422 146,101,729 Zm00001d048044 nactf45 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 148,682,940 148,684,179 GRMZM2G440219 nactf46 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 28,147,827 28,149,574 Zm00001d045600 nactf46 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 28,126,449 28,127,152 GRMZM2G112681 nactf47 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 20,832,776 20,839,314 Zm00001d008817 nactf47 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 21,509,525 21,515,943 GRMZM2G054252 nactf48 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 195,218,120 195,221,530 Zm00001d031655 nactf48 Chr1 197,545,631 197,549,052 GRMZM2G347043 nactf49 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 292,162,441 292,164,227 Zm00001d034601 nactf49 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 297,601,946 297,603,764 GRMZM2G162739 nactf5 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 159,575,160 159,577,058 Zm00001d005208 nactf5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 163,612,209 163,613,834 GRMZM2G475014 nactf50 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 178,427,919 178,429,404 Zm00001d031164 nactf50 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 180,369,693 180,371,167 GRMZM2G140901 nactf51 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 172,222,465 172,224,718 Zm00001d051956 nactf51 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 175,257,867 175,260,077 GRMZM2G342647 nactf52 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 20,171,779 20,179,415 GRMZM2G059428 nactf53 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 7,483,453 7,485,519 Zm00001d027530 nactf53 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 7,490,367 7,492,305 GRMZM2G030325 nactf54 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 3,872,449 3,875,734 Zm00001d035076 nactf54 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 3,928,244 3,931,456 GRMZM2G152543 nactf55 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 212,998,702 213,000,426 Zm00001d032182 nactf55 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 216,012,058 216,013,411 GRMZM2G386163 nactf56 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 134,727,893 134,737,413 Zm00001d020982 nactf56 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 138,832,493 138,835,958 GRMZM2G174070 nactf57 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 154,227,661 154,232,106 Zm00001d048493 nactf57 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 157,106,289 157,122,699 AC205484.3_FG005 nactf58 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 124,806,079 124,815,002 Zm00001d050870 nactf58 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 127,748,628 127,751,133 GRMZM2G100593 nactf59 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 207,025,280 207,028,850 Zm00001d018038 nactf59 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 212,630,308 212,636,028 GRMZM2G018553 nactf6 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 2,917,818 2,919,494 Zm00001d013003 nactf6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 2,977,575 2,979,101 GRMZM2G336533 nactf60 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 2,887,335 2,889,124 GRMZM2G003715 nactf61 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 78,142,498 78,146,839 Zm00001d024543 nactf61 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 77,529,347 77,533,684 GRMZM2G052239 nactf62 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 779,681 780,894 Zm00001d034984 nactf62 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 798,676 799,889 GRMZM2G054277 nactf63 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 135,925,560 135,927,070 Zm00001d021069 nactf63 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 142,080,504 142,083,844 GRMZM2G077045 nactf64 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 25,170,856 25,179,088 Zm00001d028178 nactf64 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 25,566,760 25,575,059 GRMZM2G043813 nactf65 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 130,642,692 130,645,462 Zm00001d025861 nactf65 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 131,797,076 131,799,846 GRMZM2G064541 nactf66 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 38,053,466 38,062,764 Zm00001d040318 nactf66 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 37,808,012 37,817,360 GRMZM2G083347 nactf67 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 14,449,665 14,451,543 Zm00001d023669 nactf67 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 14,594,105 14,596,141 GRMZM2G459156 nactf68 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 28,855,314 28,857,245 Zm00001d045616 nactf68 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 28,908,014 28,908,461 GRMZM2G379608 nactf69 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 116,852,378 116,855,345 GRMZM2G163251 nactf7 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 283,321,395 283,323,293 Zm00001d034277 nactf7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 288,351,666 288,353,564 GRMZM2G312201 nactf70 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 186,256,882 186,265,853 Zm00001d043094 nactf70 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 189,129,421 189,137,112 GRMZM2G099144 nactf71 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 47,676,667 47,678,102 Zm00001d003583 nactf71 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 49,012,079 49,013,406 GRMZM2G163841 nactf72 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 150,109,224 150,110,189 Zm00001d011590 nactf72 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 155,141,956 155,142,894 GRMZM2G479980 nactf73 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 4,587,851 4,589,019 Zm00001d018773 nactf73 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 4,825,498 4,826,987 GRMZM2G112548 nactf74 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 5,328,429 5,329,897 Zm00001d013151 nactf74 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 5,453,473 5,454,938 GRMZM2G100583 nactf75 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 46,961,569 46,964,308 Zm00001d049860 nactf75 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 48,975,342 48,977,969 GRMZM2G316840 nactf76 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 49,451,938 49,453,443 Zm00001d003626 nactf76 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 50,875,247 50,876,743 AC196475.3_FG005 nactf77 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 32,272,270 32,275,424 Zm00001d049540 nactf77 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 33,810,533 33,814,584 GRMZM2G406204 nactf78 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 4,241,971 4,245,996 Zm00001d027395 nactf78 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 4,341,041 4,351,530 GRMZM2G004531 nactf79 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 134,132,129 134,135,181 Zm00001d020972 nactf79 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 138,223,556 138,229,618 GRMZM2G086768 nactf8 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 116,840,085 116,849,846 GRMZM2G060116 nactf80 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 155,888,047 155,889,189 Zm00001d042246 nactf80 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 157,427,937 157,429,177 GRMZM2G042494 nactf81 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 132,501,909 132,504,247 Zm00001d047554 nactf81 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 135,223,915 135,225,952 GRMZM2G058518 nactf82 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 210,312,706 210,317,109 Zm00001d043921 nactf82 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 213,845,082 213,849,487 GRMZM2G158204 nactf83 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 45,532,530 45,535,404 Zm00001d009244 nactf83 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 46,788,863 46,789,908 GRMZM2G139700 nactf84 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 137,606,842 137,608,651 Zm00001d041791 nactf84 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 138,257,127 138,259,382 GRMZM2G435824 nactf85 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 119,146,473 119,148,431 Zm00001d025483 nactf85 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 120,194,130 120,195,766 GRMZM2G171395 nactf86 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 23,290,000 23,294,805 Zm00001d045463 nactf86 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 23,151,861 23,156,737 GRMZM2G031200 nactf87 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 164,697,457 164,699,173 Zm00001d039004 nactf87 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 168,636,237 168,637,959 GRMZM2G134687 nactf88 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 102,889,073 102,892,003 Zm00001d010239 nactf88 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 105,572,654 105,574,982 GRMZM2G340305 nactf89 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 203,127,019 203,131,923 GRMZM2G134073 nactf9 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 159,967,636 159,969,818 Zm00001d011969 nactf9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 165,320,638 165,322,096 AC203535.4_FG002 nactf90 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 157,618,651 157,620,063 Zm00001d042288 nactf90 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 159,141,395 159,142,793 GRMZM2G041668 nactf91 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 28,053,152 28,057,136 GRMZM2G048826 nactf92 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 59,362,407 59,363,516 Zm00001d050039 nactf92 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 61,707,240 61,708,265 GRMZM5G832473 nactf93 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 176,555,601 176,557,109 Zm00001d042758 nactf93 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 179,023,907 179,025,903 GRMZM2G122615 nactf94 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 209,169,170 209,170,481 Zm00001d043877 nactf94 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 212,680,911 212,681,900 GRMZM5G813651 nactf95 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 170,066,207 170,069,008 Zm00001d042580 nactf95 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 172,642,954 172,645,804 GRMZM5G803888 nactf96 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 237,492,353 237,493,667 Zm00001d007850 nactf96 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 240,885,825 240,886,925 GRMZM2G167492 nactf97 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 4,542,485 4,559,631 Zm00001d008308 nactf97 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 4,801,455 4,804,054 GRMZM2G115721 nactf98 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 56,518,998 56,523,929 Zm00001d046246 nactf98 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 76,267,442 76,272,887 GRMZM2G027309 nactf99 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 116,761,395 116,766,110 GRMZM2G018941 nad1 from: T15339 Chr1 51,011,368 51,013,407 Zm00001d028918 nad1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 51,462,257 51,464,279 GRMZM5G878308 nad2 Chr8 154,962,386 154,965,330 GRMZM2G008464 nad3 Chr8 80,199,540 80,203,096 Zm00001d009803 nad3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 82,156,141 82,159,658 GRMZM2G137312 nad4 Chr1 6,540,564 6,544,389 Zm00001d027493 nad4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 6,542,791 6,543,117 GRMZM2G014382 nad5 Chr1 4,055,334 4,063,464 Zm00001d027389 nad5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 4,149,732 4,149,992 GRMZM2G385200 nas1 from Zhou et al 2013 Chr9 135,804,104 135,805,335 Zm00001d047651 nas1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 138,081,277 138,082,483 GRMZM2G034956 nas10 one of 3 gene model on B73_V2 that align to cDNA AB061270 reported in Mizuno et al 2003 Chr9 136,049,697 136,050,938 Zm00001d047658 nas10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 138,349,816 138,351,020 GRMZM2G030036 nas2 from Zhou et al 2013 Chr1 49,283,725 49,286,176 Zm00001d028888 nas2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 49,731,260 49,733,065 GRMZM2G478568 nas3 from Zhou et al 2013 Chr1 259,836,588 259,838,272 Zm00001d033496 nas3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 264,462,071 264,463,236 GRMZM2G439195 nas4 from Zhou et al 2013 Chr5 15,816,565 15,818,557 Zm00001d013655 nas4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 16,353,618 16,354,688 GRMZM2G050108 nas5 from Zhou et al 2013 Chr7 174,448,119 174,450,107 Zm00001d022557 nas5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 179,964,493 179,965,584 GRMZM2G704488 nas6 from Zhou et al 2013 Chr9 135,552,425 135,553,600 AC233955.1_FG003 nas7 from Zhou et al 2013 Chr9 135,559,726 135,560,709 GRMZM2G312481 nas8 from Zhou et al 2013 Chr9 135,973,757 135,974,988 Zm00001d047656 nas8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 138,272,839 138,274,043 GRMZM2G124785 nas9 from Zhou et al 2013 Chr1 49,317,235 49,319,685 Zm00001d028887 nas9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 49,660,780 49,662,585 GRMZM2G455658 natl1 Best et al., 2016 Chr4 169,187,814 169,189,693 Zm00001d051847 natl1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 172,100,463 172,103,469 GRMZM2G011129 nbp1 Classical Gene Chr7 46,493,910 46,497,427 GRMZM2G011129 nbp1 Chr7 46,493,910 46,497,427 Zm00001d019648 nbp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 47,990,040 47,993,872 GRMZM2G031496 nbp35 Chr5 181,446,831 181,450,049 Zm00001d017120 nbp35 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 185,983,894 185,986,953 GRMZM2G092447 nbr1a Chr5 179,981,344 179,986,272 Zm00001d017072 nbr1a Chr5 184,389,616 184,394,455 GRMZM2G139846 nbr1b Chr2 38,472,943 38,483,627 Zm00001d003300 nbr1b Chr2 39,371,689 39,384,197 GRMZM2G407181 nced2 Owens et al., 2014 Chr1 174,550,907 174,553,815 Zm00001d031086 nced2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 176,495,793 176,506,822 GRMZM5G858784 nced3 from EU955712 Chr3 87,358,369 87,360,132 Zm00001d041319 nced3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 111,919,013 111,920,827 GRMZM2G408158 nced4 Owens et al., 2014 Chr2 235,244,890 235,246,909 Zm00001d007876 nced4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 241,535,851 241,537,578 GRMZM2G417954 nced5 from BT062179 Chr7 5,981,141 5,983,425 Zm00001d018819 nced5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 6,342,456 6,344,361 GRMZM2G110192 nced6 Owens et al., 2014 Chr4 159,750,700 159,753,143 Zm00001d051556 nced6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 162,737,448 162,739,364 GRMZM2G330848 nced7 Owens et al., 2014 Chr7 175,907,236 175,908,949 Zm00001d022623 nced7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 181,400,407 181,408,261 GRMZM2G150363 nced8 Owens et al., 2014 Chr5 200,743,141 200,745,544 Zm00001d017766 nced8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 206,199,093 206,201,012 GRMZM5G838285 nced9 Owens et al., 2014 Chr5 16,869,343 16,871,148 Zm00001d013689 nced9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 17,465,790 17,467,595 GRMZM2G134797 ndk1 Classical Gene Chr7 149,952,414 149,954,818 Zm00001d021526 ndk1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 155,153,847 155,156,140 GRMZM2G178576 ndpk1 Kopylov et al., 2015 Chr1 94,688,138 94,693,847 Zm00001d029969 ndpk1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 96,905,186 96,905,818 GRMZM5G870342 nec4 from DQ250640 Chr2 10,671,618 10,672,229 Zm00001d002358 nec4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 10,781,211 10,785,395 GRMZM2G075637 nfa104 Chr5 176,433,165 176,437,607 Zm00001d016935 nfa104 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 180,421,151 180,425,188 GRMZM2G090217 nfc103a based on genetic map, and alignment to sequence AF440219 Chr1 251,873,300 251,887,770 Zm00001d033247 nfc103a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 255,988,480 256,003,180 GRMZM2G320606 nfc103b based on genetic map position, and alignment to sequence AF440219 Chr5 17,928,839 17,933,771 Zm00001d013702 nfc103b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 17,942,846 17,948,363 GRMZM2G032711 nfc104a based on genetic map position, and alignment to sequence AY093418 Chr7 175,605,746 175,613,533 Zm00001d022614 nfc104a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 181,107,203 181,114,528 GRMZM2G145968 nfd102 Chr2 17,972,424 17,980,326 Zm00001d002659 nfd102 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 18,564,412 18,572,241 GRMZM2G125648 nfd106 from: AF440223 and assigned by the Grassius project, (Yilmaz et al 2009) to hmg7 Chr4 195,556,757 195,558,537 Zm00001d052749 nfd106 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 199,665,081 199,666,577 GRMZM2G032252 nfd110 from: AJ244017; hmg14 locus assigned by the Grassius project, (Yilmaz et al 2009) Chr8 21,829,304 21,836,106 Zm00001d008847 nfd110 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 22,501,898 22,508,623 GRMZM5G804893 nfy2 from: X59714 & assigned by the Grassius project, (Yilmaz et al 2009) to cadtfr17 Chr6 152,381,850 152,387,535 Zm00001d038397 nfy2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 156,313,336 156,319,037 GRMZM2G000686 nfya1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 15,805,373 15,808,637 Zm00001d027874 nfya1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 16,038,734 16,042,002 GRMZM2G110210 nfyc2 Zhang et al., 2016 Chr1 73,920,871 73,922,877 GRMZM2G079381 nii2 from: Enrez Gene 542264 Chr4 178,613,063 178,616,618 Zm00001d052165 nii2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 181,552,730 181,556,339 GRMZM2G041980 nip1a from BT040783 on v3 Chr5 148,343,674 148,346,041 Zm00001d016237 nip1a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 151,835,826 151,838,198 GRMZM2G028325 nip2a Chr5 206,972,501 206,976,357 Zm00001d018037 nip2a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 212,580,241 212,583,888 GRMZM2G137108 nip2b Chr6 113,136,258 113,140,405 Zm00001d037228 nip2b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 116,839,545 116,843,339 GRMZM2G081239 nip2c from: AF342810 Chr9 4,504,176 4,507,865 Zm00001d044826 nip2c Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 4,090,119 4,093,538 GRMZM2G178517 nit1 B73_v2 alignment to sequence accession AY156979 Chr5 188,512,723 188,518,155 Zm00001d017352 nit1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 193,500,301 193,505,634 GRMZM2G111225 nit2 B73_V2 alignment to sequence accession AY156978 from Park et al 2003 Chr4 145,590,144 145,596,670 Zm00001d051214 nit2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 148,918,694 148,925,044 GRMZM2G129261 nkd1 Yi et al., 2015 Chr2 17,718,739 17,726,319 Zm00001d002654 nkd1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 18,312,495 18,320,006 GRMZM5G884137 nkd2 Yi et al., 2015 Chr10 137,525,111 137,530,608 Zm00001d026113 nkd2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 138,719,539 138,725,394 AC233880.1_FG006 nlp1 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 1,290,534 1,292,045 Zm00001d039250 nlp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 557,240 559,220 GRMZM2G071322 nlp10 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 226,910,212 226,911,995 Zm00001d044519 nlp10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 230,739,324 230,740,436 GRMZM2G472589 nlp11 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 226,922,510 226,928,416 Zm00001d053437 nlp11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 231,345,494 231,350,265 GRMZM2G105641 nlp12 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 206,943,203 206,944,195 Zm00001d018035 nlp12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 212,546,517 212,547,423 GRMZM2G053298 nlp13 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 147,146,774 147,152,347 Zm00001d021442 nlp13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 152,335,837 152,341,211 GRMZM2G392306 nlp14 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 4,398,480 4,399,600 GRMZM2G042278 nlp15 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 76,715,126 76,718,411 Zm00001d015201 nlp15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 78,984,402 78,987,766 GRMZM2G004663 nlp16 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 98,208,303 98,218,330 Zm00001d041160 nlp16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 100,860,278 100,861,343 GRMZM2G048582 nlp17 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 198,102,096 198,107,328 Zm00001d006293 nlp17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 203,858,974 203,864,535 GRMZM2G057131 nlp2 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 18,055,134 18,060,421 Zm00001d002661 nlp2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 18,646,955 18,652,496 GRMZM2G031398 nlp3 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 33,701,563 33,710,286 Zm00001d003176 nlp3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 34,606,365 34,611,108 GRMZM2G375675 nlp4 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 29,209,906 29,216,097 Zm00001d009017 nlp4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 30,237,363 30,243,290 AC207342.3_FG001 nlp5 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 135,914,954 135,916,479 Zm00001d011142 nlp5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 140,372,645 140,374,170 GRMZM2G475305 nlp6 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 1,540,716 1,545,106 GRMZM2G109509 nlp7 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 7,079,807 7,085,736 Zm00001d027510 nlp7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 7,075,161 7,079,887 GRMZM2G176655 nlp8 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 133,982,025 133,991,228 Zm00001d037786 nlp8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 137,825,036 137,834,294 GRMZM2G105004 nlp9 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 127,592,222 127,597,271 Zm00001d025757 nlp9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 128,605,358 128,610,245 GRMZM2G568636 nnr1 Classical Gene Chr4 56,335,735 56,340,792 Zm00001d049995 nnr1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 58,642,687 58,647,338 GRMZM2G027821 nod1 Rosa et al, 2017 Chr1 11,979,866 11,984,789 AC233751.1_FG002 not1 Preston et al 2011 Chr4 44,806,723 44,811,049 Zm00001d049824 not1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 46,625,882 46,630,722 GRMZM2G350841 npi285a(cac) Chr10 5,006,086 5,010,500 GRMZM2G158668 npi393 Chr6 96,837,112 96,840,842 GRMZM2G069260 npi414a Chr8 169,336,134 169,340,170 GRMZM2G069198 nrat1 Guimaraes et al., 2014 Chr5 43,175,325 43,180,945 Zm00001d014391 nrat1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 44,425,623 44,431,178 GRMZM2G062650 nrp1 assigned by the Grassius project, (Yilmaz et al 2009) to nactf128 Chr3 31,805,298 31,807,331 Zm00001d040189 nrp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 31,401,124 31,403,248 GRMZM2G054225 nrpd2/e2 from GQ356034 and GQ453405 Chr2 6,336,518 6,347,954 Zm00001d002125 nrpd2/e2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 6,290,891 6,302,652 GRMZM2G010251 nrt1 from: AY659965 Chr4 240,790,398 240,792,301 Zm00001d054060 nrt1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 245,649,222 245,650,796 GRMZM2G010280 nrt2 from: AJ344451 Chr4 240,779,448 240,781,473 Zm00001d054057 nrt2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 245,638,263 245,639,837 GRMZM2G163866 nrt3 from: AY968681 Chr5 68,900,266 68,902,129 Zm00001d014976 nrt3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 70,820,654 70,822,222 GRMZM2G163494 nrt4 from: NM_001112454 Chr2 37,958,393 37,960,212 Zm00001d003287 nrt4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 38,811,050 38,812,608 GRMZM2G048324 nrx1 from: BT037898 Chr1 70,432,377 70,436,980 Zm00001d029457 nrx1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 71,670,964 71,675,538 GRMZM2G069028 ns1 Classical Gene Chr2 143,166,134 143,168,172 Zm00001d004889 ns1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 147,004,057 147,005,221 Zm00001d052598 ns2 v4 Chr4 194,314,663 194,315,808 GRMZM2G110258 nta1 Chr9 154,869,141 154,872,005 GRMZM2G407249 ntf1 Chr1 194,524,205 194,526,962 Zm00001d031627 ntf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 196,865,024 196,868,008 GRMZM2G006953 ntf2 Chr4 44,885,697 44,888,397 Zm00001d049826 ntf2 Chr4 46,705,236 46,707,933 GRMZM2G073377 nthr3 from: BT042787 Chr7 141,680,355 141,682,024 Zm00001d021226 nthr3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 146,556,758 146,557,628 GRMZM2G031461 nudix1 Chr7 88,132,355 88,151,112 Zm00001d020087 nudix1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 91,033,435 91,038,130 GRMZM2G170013 nyc1 Chan et al., 2017 Chr3 2,138,069 2,142,526 Zm00001d039312 nyc1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 1,461,989 1,466,446 GRMZM2G449909 o1 from Wang et al., 2012 Chr4 176,899,980 176,926,797 Zm00001d052110 o1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 179,900,072 179,926,942 GRMZM2G346263 o10 Yao et al., 2016 Chr1 265,018,615 265,025,388 Zm00001d033654 o10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 269,766,090 269,773,110 GRMZM2G015534 o2 Classical Gene Chr7 10,798,507 10,801,399 Zm00001d018971 o2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 11,075,377 11,078,232 GRMZM2G142873 o5 from alignment of fl cDNA BT042676 (Myers et al 2011) Chr7 117,734,381 117,741,648 Zm00001d020537 o5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 121,388,769 121,395,911 GRMZM2G074759 o7 Miclaus et al., 2011 Chr10 148,065,471 148,067,620 Zm00001d026649 o7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 149,382,212 149,384,169 GRMZM2G479885 obf1 assigned by the Grassius project, (Yilmaz et al 2009) to bzip39 Chr1 147,170,752 147,172,309 Zm00001d030617 obf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 148,806,103 148,807,147 GRMZM2G019907 obf3 from BT034456 Chr3 187,349,410 187,394,170 Zm00001d043153 obf3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 190,250,038 190,259,712 GRMZM2G125243 obf4 from BT066069 Chr8 170,849,743 170,855,748 Zm00001d012553 obf4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 176,514,160 176,521,162 GRMZM2G026643 ocl1 Classical Gene Chr3 27,552,061 27,559,751 Zm00001d040090 ocl1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 27,133,419 27,141,104 AC235534.1_FG007 ocl2 Classical Gene Chr10 136,957,427 136,964,001 Zm00001d026088 ocl2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 138,129,427 138,138,311 GRMZM2G116658 ocl3 Classical Gene Chr7 141,712,281 141,718,468 Zm00001d021236 ocl3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 146,658,310 146,664,494 GRMZM2G123140 ocl4 Classical Gene Chr1 100,912,576 100,918,541 Zm00001d030069 ocl4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 103,280,320 103,286,276 GRMZM2G130442 ocl5a Classical Gene Chr4 29,008,617 29,014,800 Zm00001d049443 ocl5a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 30,518,856 30,525,048 GRMZM2G151041 odo1 Chr10 109,817,358 109,823,752 Zm00001d025240 odo1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 110,657,182 110,663,551 GRMZM2G021617 oec2 from: M87435 (chr 9 hit) Chr9 57,921,763 57,923,880 Zm00001d021703 oec2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 160,760,828 160,761,969 GRMZM2G175562 oec33 chr 6 B73_V2 alignment to EU959681 Chr6 88,908,079 88,909,780 Zm00001d036535 oec33 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 91,338,946 91,340,275 GRMZM2G113349 oec33b from B73_V2 alignment to cDNA EU959477 Chr5 51,897,880 51,899,471 Zm00001d014564 oec33b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 53,469,769 53,471,323 GRMZM2G058070 oec6 Classical Gene & Z26824 (chr 7 hit) Chr7 155,404,548 155,405,848 GRMZM2G055737 ofp1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 5,511,015 5,512,341 Zm00001d027453 ofp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 5,589,770 5,590,513 GRMZM2G032478 ofp10 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 142,057,406 142,058,499 Zm00001d004881 ofp10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 146,206,362 146,207,063 GRMZM2G130131 ofp11 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 142,230,107 142,231,460 Zm00001d004882 ofp11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 146,379,218 146,380,414 GRMZM2G359116 ofp12 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 217,596,031 217,596,732 Zm00001d007168 ofp12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 223,714,590 223,715,291 GRMZM2G169973 ofp13 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 2,145,565 2,147,044 Zm00001d039313 ofp13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 1,469,769 1,470,902 GRMZM2G434098 ofp14 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 176,376,917 176,378,611 Zm00001d042752 ofp14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 178,900,363 178,901,103 GRMZM2G133311 ofp15 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 176,399,487 176,401,158 Zm00001d042753 ofp15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 178,923,376 178,924,152 GRMZM2G330159 ofp16 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 184,369,059 184,370,437 Zm00001d043046 ofp16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 187,298,260 187,299,366 GRMZM2G127431 ofp17 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 198,109,815 198,111,352 Zm00001d043470 ofp17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 201,134,332 201,135,348 GRMZM2G023285 ofp18 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 200,770,762 200,772,307 Zm00001d043535 ofp18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 203,077,676 203,078,698 AC198725.4_FG004 ofp19 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 217,373,974 217,375,254 Zm00001d044167 ofp19 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 220,883,427 220,884,707 GRMZM2G096252 ofp2 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 12,208,463 12,209,068 Zm00001d027739 ofp2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 12,400,468 12,401,019 GRMZM2G150823 ofp20 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 222,037,098 222,037,820 Zm00001d044357 ofp20 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 225,734,113 225,734,829 GRMZM2G013302 ofp21 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 190,514,387 190,515,895 Zm00001d052605 ofp21 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 194,504,909 194,506,069 GRMZM2G013271 ofp22 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 190,553,240 190,554,695 Zm00001d052606 ofp22 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 194,544,003 194,544,830 GRMZM2G041761 ofp23 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 196,301,608 196,303,357 Zm00001d017606 ofp23 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 201,436,779 201,437,657 GRMZM2G436659 ofp24 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 475,010 478,353 Zm00001d034973 ofp24 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 479,943 480,971 GRMZM2G100133 ofp25 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 134,751,875 134,753,206 Zm00001d037814 ofp25 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 138,654,839 138,655,693 GRMZM2G122709 ofp26 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 149,397,746 149,398,805 Zm00001d038283 ofp26 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 153,288,564 153,289,250 GRMZM2G430871 ofp27 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 149,479,675 149,480,789 Zm00001d038284 ofp27 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 153,339,730 153,340,491 GRMZM2G026927 ofp28 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 154,037,242 154,038,876 Zm00001d038473 ofp28 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 158,066,140 158,067,240 GRMZM2G127680 ofp29 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 159,209,864 159,210,811 Zm00001d038714 ofp29 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 163,229,334 163,230,281 GRMZM2G121706 ofp3 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 23,422,957 23,424,234 Zm00001d000458 ofp3 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73V4_ctg119 9,942 10,808 GRMZM2G037043 ofp30 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 95,805,103 95,806,257 Zm00001d020198 ofp30 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 98,791,002 98,791,772 GRMZM5G845472 ofp31 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 173,016,115 173,017,181 Zm00001d022446 ofp31 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 177,907,261 177,908,001 GRMZM2G001721 ofp32 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 19,242,262 19,242,864 Zm00001d008785 ofp32 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 19,945,414 19,946,016 GRMZM2G067376 ofp33 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 91,371,796 91,372,796 Zm00001d009993 ofp33 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 93,658,817 93,659,596 GRMZM2G028982 ofp34 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 144,996,205 144,997,637 Zm00001d011410 ofp34 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 149,778,971 149,780,170 GRMZM2G085035 ofp35 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 166,174,085 166,175,881 Zm00001d012282 ofp35 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 171,844,019 171,844,762 AC204502.4_FG006 ofp36 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 169,827,040 169,828,125 Zm00001d012498 ofp36 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 175,509,375 175,510,460 GRMZM2G137869 ofp37 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 125,223,241 125,224,349 Zm00001d047346 ofp37 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 127,019,320 127,020,147 GRMZM2G057753 ofp38 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 6,401,895 6,403,520 Zm00001d023455 ofp38 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 6,094,302 6,095,315 AC187891.3_FG006 ofp39 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 6,406,678 6,407,469 Zm00001d023456 ofp39 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 6,099,071 6,099,862 GRMZM2G075988 ofp4 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 56,308,513 56,309,790 Zm00001d029067 ofp4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 56,999,172 57,000,011 GRMZM2G432846 ofp40 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 120,555,416 120,556,201 Zm00001d025534 ofp40 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 121,608,318 121,609,103 GRMZM2G040673 ofp41 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 136,127,929 136,129,652 Zm00001d026061 ofp41 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 137,306,305 137,307,456 GRMZM2G106836 ofp42 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 148,249,961 148,250,692 Zm00001d026661 ofp42 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 149,588,101 149,588,802 GRMZM2G106781 ofp43 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 148,265,774 148,266,844 Zm00001d026663 ofp43 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 149,603,978 149,604,751 GRMZM2G039312 ofp5 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 82,197,775 82,199,916 Zm00001d029718 ofp5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 83,823,527 83,824,309 GRMZM2G095452 ofp6 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 238,871,804 238,872,878 Zm00001d032903 ofp6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 242,399,005 242,399,814 GRMZM2G164428 ofp7 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 15,919,760 15,921,239 Zm00001d002594 ofp7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 16,330,379 16,331,572 GRMZM2G053985 ofp8 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 45,347,688 45,348,600 Zm00001d003521 ofp8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 46,609,159 46,609,809 GRMZM2G055257 ofp9 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 56,421,131 56,422,484 Zm00001d003762 ofp9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 57,854,202 57,855,561 GRMZM2G139031 ogg1 Chr5 172,334,155 172,337,856 Zm00001d016801 ogg1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 176,395,232 176,398,898 GRMZM2G016150 ohp1 Classical Gene Chr1 288,278,441 288,283,216 Zm00001d034457 ohp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 293,562,779 293,567,510 GRMZM2G007063 ohp2 Classical Gene Chr5 4,253,958 4,257,719 Zm00001d013074 ohp2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 4,364,088 4,367,769 GRMZM2G337229 ole1 Classical Gene Chr2 21,389,641 21,391,610 Zm00001d002768 ole1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 22,071,813 22,072,283 AC206941.2_FG002 ole3 Classical Gene Chr5 12,302,727 12,303,287 Zm00001d013494 ole3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 12,718,250 12,718,810 GRMZM2G480954 ole4 from: U13702 Chr1 263,817,609 263,818,594 Zm00001d033612 ole4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 268,595,955 268,596,485 GRMZM2G018417 ommp1 from: EU956492 Chr1 8,306,859 8,347,066 Zm00001d027578 ommp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 8,363,014 8,365,720 GRMZM2G127948 omt1 Li et al., 2013 Chr6 79,357,043 79,359,228 Zm00001d036293 omt1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 82,193,275 82,194,916 GRMZM2G099363 omt2 from: AI637136 Chr9 16,325,170 16,327,546 Zm00001d045206 omt2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 16,076,158 16,081,626 GRMZM2G077486 omt3 Chr10 80,419,760 80,423,498 GRMZM2G332522 omt4 Chr4 198,256,537 198,258,374 Zm00001d052841 omt4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 202,392,492 202,393,630 GRMZM2G106303 opr1 B73_v2 alignment to AY108052 Chr9 7,393,651 7,395,331 Zm00001d044908 opr1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 6,927,730 6,929,377 GRMZM2G000236 opr2 B72_v2 alignment to AY921639 Chr9 7,308,584 7,310,337 Zm00001d044906 opr2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 6,893,412 6,895,013 GRMZM2G156712 opr3 from alignment to cDNA AY921640 on B73_V@ Chr6 111,640,645 111,642,331 Zm00001d037182 opr3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 114,979,500 114,981,186 Zm00001d011097 opr4 from alignment to AY921641 Chr8 138,824,703 138,825,854 GRMZM2G087192 opr5 from B73_v2 alignment to cDNA AY921642 Chr2 47,717,535 47,720,768 Zm00001d003584 opr5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 49,052,848 49,056,045 GRMZM2G068947 opr6 from B73_V2 alignment to cDNA AY921643 Chr3 69,859,514 69,861,831 Zm00001d040842 opr6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 70,151,471 70,153,788 GRMZM2G148281 opr7 from alignment on B73_v2 of cDNA AY921644 Chr1 207,946,160 207,950,205 Zm00001d032049 opr7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 210,749,060 210,752,906 GRMZM2G082087 opr8 aligns to cDNA AY921645 Chr4 63,562,327 63,567,747 Zm00001d050107 opr8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 66,086,547 66,090,296 GRMZM2G455243 orc1 Chr9 12,350,567 12,372,569 Zm00001d045080 orc1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 11,803,157 11,825,109 GRMZM2G117238 orc2 Chr5 190,532,565 190,536,335 GRMZM2G381822 orc3 Chr1 174,021,190 174,024,616 Zm00001d031073 orc3 Chr1 175,980,669 175,983,357 GRMZM5G876520 orc4 Chr3 207,987,759 207,990,967 GRMZM2G089556 orc5 from: EU954679 Chr5 6,552,930 6,555,038 Zm00001d013238 orc5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 6,855,758 6,858,257 GRMZM5G834666 orf140-b (mt) Wei & Han, 2016 ChrMt 265,988 266,410 GRMZM2G156255 ork1 Chr6 115,732,874 115,738,363 GRMZM2G169593 orp1 Classical Gene Chr4 35,950,109 35,954,045 GRMZM2G169593 orp1 Chr4 35,950,109 35,954,045 Zm00001d049610 orp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 37,573,636 37,577,238 GRMZM2G005024 orp2 Classical Gene Chr10 84,247,242 84,250,053 Zm00001d024702 orp2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 84,130,306 84,133,108 GRMZM5G899787 orrm1 Sun et al., 2013 Chr5 204,811,304 204,817,342 Zm00001d017930 orrm1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 210,256,398 210,262,442 GRMZM2G462325 ost1 Chr7 19,083,049 19,101,243 Zm00001d019165 ost1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 19,783,137 19,789,350 GRMZM2G325019 otp51 Belcher et al., 2015 Chr5 200,487,577 200,491,114 GRMZM2G383088 oxmt1 alignment of cDNA AB112936 to B73_v2 assemgly Chr10 28,396,447 28,402,412 Zm00001d023929 oxmt1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 29,148,234 29,154,174 GRMZM2G419806 oy1 Classical Gene Chr10 9,225,307 9,229,786 Zm00001d023536 oy1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 9,162,610 9,167,073 GRMZM5G822829 P This is probably the correct locus associated with this gene model in B73, which is r1-r. Chr10 138,489,998 138,498,818 GRMZM2G084799 p1 Classical Gene Chr1 48,118,788 48,129,338 Zm00001d028842 p1 Chr1 48,424,617 48,430,126 GRMZM2G057027 p2 Classical Gene Chr1 48,096,443 48,101,954 Zm00001d028842 p2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 48,424,617 48,430,126 GRMZM2G178460 paac1 Chr3 39,820,091 39,823,461 GRMZM2G058292 pac1 Classical Gene Chr5 196,661,199 196,666,224 Zm00001d017616 pac1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 201,801,849 201,802,910 GRMZM2G074604 pal1 Classical Gene Chr5 186,727,239 186,730,980 Zm00001d017274 pal1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 191,418,711 191,422,345 GRMZM2G441347 pal2 from: BT069509 Chr2 28,745,742 28,748,887 Zm00001d003016 pal2 Chr2 29,538,173 29,541,434 GRMZM2G160541 pal3 from: M95077 (chr 4 hit) Chr4 143,404,315 143,408,521 Zm00001d051161 pal3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 146,706,971 146,710,589 GRMZM2G063917 pal4 Chr4 143,539,451 143,542,437 GRMZM2G081582 pal5 Chr4 143,491,905 143,496,980 GRMZM2G118345 pal6 Chr2 28,677,255 28,680,358 GRMZM2G170692 pal7 Rius et al., 2016 Chr5 186,845,785 186,848,361 Zm00001d017279 pal7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 191,539,072 191,541,219 GRMZM2G334660 pal8 Chr5 186,783,199 186,785,900 GRMZM2G029048 pal9 Chr5 186,776,435 186,780,444 Zm00001d017275 pal9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 191,467,430 191,471,500 GRMZM5G836190 pan1 sequence alignment to B73_v2 by DNA accession FJ231525 (Nov 2011 M Schaeffer) Chr1 188,011,520 188,014,028 Zm00001d031437 pan1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 190,179,856 190,183,037 GRMZM2G034572 pan2 Zhang et al., 2012 Chr2 237,789,995 237,798,040 Zm00001d007862 pan2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 241,117,670 241,125,665 GRMZM2G034152 pao1 Chr10 62,260,920 62,265,303 Zm00001d024281 pao1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 61,486,928 61,491,037 GRMZM2G124718 parp1 from: BT034831 Chr8 44,048,003 44,054,105 Zm00001d009231 parp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 45,256,131 45,261,408 GRMZM5G831712 parp2 Chr2 158,095,514 158,128,380 Zm00001d005168 parp2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 162,092,060 162,124,973 GRMZM2G177508 pba1 from: EU962752 (chr1 hit) Chr1 5,582,721 5,584,189 Zm00001d027456 pba1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 5,661,737 5,663,089 GRMZM2G146283 pbf1 assigned by the Grassius project, (Yilmaz et al 2009) to dof3; renamed dof103; subsequesntly found indentical to pbf1 Chr2 154,144,472 154,148,029 GRMZM2G123709 pc326 Chr9 126,453,735 126,456,483 Zm00001d047382 pc326 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 128,261,281 128,263,941 GRMZM2G001696 pck1 from alignment to cDNA AB018744 Chr1 35,744,406 35,748,813 Zm00001d028471 pck1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 35,960,441 35,964,750 GRMZM5G870932 pck2 from: BT054804 Chr9 142,082,081 142,086,925 Zm00001d047893 pck2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 144,511,510 144,516,403 GRMZM2G030523 pcna1 Classical Gene Chr5 214,473,508 214,475,861 Zm00001d018415 pcna1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 220,297,125 220,299,214 GRMZM2G108712 pcna2 from: Entrez gene 542357 Chr4 173,062,872 173,064,850 Zm00001d051995 pcna2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 176,048,087 176,049,833 GRMZM2G168375 pco061803 Chr8 156,176,245 156,178,529 GRMZM2G072911 pco065449 Chr5 196,155,729 196,159,058 Zm00001d017601 pco065449 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 201,313,634 201,316,918 GRMZM2G410812 pco066521 Chr6 153,662,746 153,665,882 Zm00001d038456 pco066521 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 157,648,981 157,650,905 GRMZM2G059865 pco082477 Chr1 4,854 9,652 GRMZM2G178958 pco101682(581) from: AY103547 Chr5 213,590,124 213,594,002 Zm00001d018370 pco101682(581) Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 219,420,754 219,424,631 GRMZM2G058250 pco116928b Chr3 165,768,442 165,770,645 Zm00001d042454 pco116928b Chr3 168,343,337 168,345,376 GRMZM2G043291 pco124824 Chr1 43,114,366 43,116,827 Zm00001d028692 pco124824 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 43,328,452 43,334,856 GRMZM2G006791 pco131924a Chr5 172,434,779 172,439,962 GRMZM2G055678 PCO134814 Chr6 134,643,812 134,656,424 Zm00001d037811 PCO134814 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 138,545,312 138,550,589 GRMZM2G026892 PCO135705 Chr5 23,284,770 23,288,690 Zm00001d013886 PCO135705 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 23,781,964 23,784,644 GRMZM2G045275 pco135758 Jamann et al., 2017 Chr3 218,979,525 218,985,381 Zm00001d044232 pco135758 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 222,542,813 222,548,835 GRMZM2G049021 pco137163 Chr5 133,656,772 133,665,057 Zm00001d015986 pco137163 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 136,921,862 136,930,137 GRMZM2G084958 pcr1 from sequence accession EU963402.1 GI:195627379 | PCO151862 AY106314.1 GI:21209392 | Chr2 1,463,875 1,465,462 Zm00001d001820 pcr1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 1,439,871 1,441,447 AC197705.4_FG001 pdc1 from X17555 Chr8 117,692,828 117,694,964 Zm00001d010588 pdc1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 121,126,170 121,128,814 GRMZM2G038821 pdc2 Classical Gene Chr8 15,550,758 15,554,318 Zm00001d008651 pdc2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 15,983,269 15,986,705 GRMZM2G087186 pdc3 Classical Gene Chr1 45,517,324 45,520,500 Zm00001d028759 pdc3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 45,724,685 45,729,020 GRMZM2G361693 pdh1 from: AF069911 Chr4 182,908,776 182,913,540 Zm00001d052289 pdh1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 186,090,480 186,095,214 GRMZM2G043198 pdh2 from: AF069908 Chr1 195,433,120 195,449,499 Zm00001d031659 pdh2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 197,760,195 197,776,370 GRMZM2G097226 pdh3 from: AF069909 Chr2 193,226,331 193,233,048 Zm00001d006107 pdh3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 198,318,592 198,324,907 GRMZM2G128121 pdh4 from: AF069910 Chr7 135,870,838 135,874,027 GRMZM2G091481 pdi1 Classical Gene Chr4 14,877,067 14,881,858 GRMZM2G091481 pdi1 from Cell Genomics project Oct 2013) Chr4 14,877,067 14,881,858 Zm00001d049099 pdi1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 15,973,748 15,978,441 GRMZM2G113629 pdi10 Chr2 50,618,990 50,621,060 Zm00001d003654 pdi10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 52,014,446 52,017,333 GRMZM2G176443 pdi11 from: AY739293 Chr10 117,344,580 117,348,113 Zm00001d025131 pdi11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 105,800,908 105,804,404 GRMZM2G067063 pdi12 Chr2 204,369,552 204,379,182 Zm00001d006512 pdi12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 210,284,963 210,294,947 GRMZM2G163421 pdi2 from: AY739285 Chr2 221,208,466 221,212,560 Zm00001d007301 pdi2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 227,279,908 227,283,960 GRMZM2G134889 pdi3 Chr4 241,788,226 241,794,277 Zm00001d054106 pdi3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 246,775,383 246,780,965 GRMZM2G033829 pdi4 from: AY739287 Chr5 66,062,056 66,073,374 Zm00001d014912 pdi4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 67,939,060 67,961,759 GRMZM2G014076 pdi5 Chr9 16,724,287 16,729,342 Zm00001d045218 pdi5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 16,468,794 16,473,687 GRMZM2G128171 pdi6 from: AY739288 Chr3 64,460,450 64,464,396 Zm00001d040766 pdi6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 64,552,842 64,556,161 GRMZM2G159369 pdi7 from: AY739289 Chr6 126,962,678 126,967,338 Zm00001d037590 pdi7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 130,722,299 130,726,941 GRMZM2G389173 pdi8 from: AY739290 Chr7 124,417,173 124,422,099 Zm00001d020687 pdi8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 128,422,717 128,427,744 GRMZM2G073628 pdi9 Chr1 44,196,096 44,197,753 Zm00001d028726 pdi9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 44,373,879 44,382,034 GRMZM2G306345 pdk1 aligns to genbank accession S46966 (M Schaeffer 2012) Chr6 146,179,404 146,189,965 Zm00001d038163 pdk1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 150,024,486 150,035,717 GRMZM2G097457 pdk2 aligns to sequence S46967 (M Schaeffer 2012)) Chr8 106,530,187 106,541,083 Zm00001d010321 pdk2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 109,459,050 109,469,711 GRMZM2G097821 pdk3 Zaidi et al., 2015 Chr3 174,102,966 174,108,133 Zm00001d042676 pdk3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 176,508,463 176,513,579 AC217975.3_FG001 pdk4 Chr7 168,632,072 168,635,401 Zm00001d022274 pdk4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 174,141,065 174,144,404 GRMZM2G107196 pdlk1 Chr1 64,007,986 64,013,684 Zm00001d029285 pdlk1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 64,841,576 64,846,984 GRMZM2G066860 pdlp1 from Cell Genomics Project (Oct 20130 Chr1 8,877,557 8,880,470 Zm00001d027607 pdlp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 8,919,684 8,921,767 GRMZM2G131286 pdrp1 from B73_V2 alignment to cDNA DQ645424.1 GI:108733638 Chr2 204,498,422 204,501,387 Zm00001d006520 pdrp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 210,399,298 210,402,238 GRMZM2G092008 pebp1 Classical Gene Chr3 231,199,114 231,200,263 Zm00001d044705 pebp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 235,432,714 235,437,168 GRMZM2G152689 pebp10 Classical Gene Chr3 28,400,356 28,402,122 GRMZM2G117057 pebp11 Classical Gene Chr6 121,720,043 121,721,582 Zm00001d037439 pebp11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 125,464,175 125,465,714 GRMZM2G103666 pebp12 Classical Gene Chr3 197,706,353 197,708,239 Zm00001d043461 pebp12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 200,703,155 200,704,705 GRMZM2G108016 pebp13 Classical Gene Chr5 150,036,613 150,037,929 Zm00001d016253 pebp13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 153,523,441 153,524,604 GRMZM2G373928 pebp14 Classical Gene Chr8 25,338,663 25,347,919 Zm00001d008939 pebp14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 26,134,915 26,143,970 GRMZM2G051338 pebp15 Classical Gene Chr6 76,400,211 76,402,023 Zm00001d036242 pebp15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 79,177,907 79,179,890 GRMZM2G127121 pebp16 Classical Gene Chr5 181,990,493 181,993,244 Zm00001d017134 pebp16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 186,525,660 186,529,038 GRMZM2G075215 pebp17 Classical Gene Chr2 120,292,154 120,293,853 Zm00001d004630 pebp17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 123,641,554 123,643,401 GRMZM2G158809 pebp18 Classical Gene Chr2 193,839,589 193,845,094 Zm00001d006116 pebp18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 199,001,851 199,007,982 GRMZM2G062052 pebp19 Classical Gene Chr10 126,937,360 126,941,217 Zm00001d025737 pebp19 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 127,951,568 127,954,961 GRMZM2G156079 pebp2 Classical Gene Chr4 106,696,523 106,697,982 Zm00001d050649 pebp2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 110,786,095 110,787,579 AC214791.2_FG002 pebp20 Classical Gene Chr10 36,388,693 36,389,588 Zm00001d024023 pebp20 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 37,447,172 37,448,145 GRMZM2G019993 pebp21 Alter et al., 2016 Chr2 74,102,888 74,107,552 Zm00001d004010 pebp21 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 75,418,521 75,419,477 GRMZM2G440005 pebp24 Chr7 138,923,902 138,933,246 Zm00001d021135 pebp24 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 143,617,763 143,627,668 GRMZM2G021560 pebp25 From: EU241936 Chr2 35,895,307 35,898,831 Zm00001d003226 pebp25 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 36,779,809 36,782,444 GRMZM2G400167 pebp26 Chr9 77,335,866 77,339,429 Zm00001d046300 pebp26 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 79,370,791 79,374,459 GRMZM2G338454 pebp3 Classical Gene Chr10 5,465,315 5,465,881 Zm00001d023420 pebp3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 5,099,284 5,100,559 GRMZM2G075081 pebp4 Classical Gene Chr2 58,373,992 58,376,007 Zm00001d003804 pebp4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 59,926,707 59,928,357 AC217051.3_FG006 pebp5 Classical Gene Chr10 114,050,161 114,051,244 Zm00001d025346 pebp5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 115,025,067 115,026,953 GRMZM2G132880 pebp6 Classical Gene Chr4 188,561,914 188,563,106 Zm00001d052537 pebp6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 192,553,796 192,554,988 GRMZM2G141756 pebp7 Classical Gene Chr6 159,399,177 159,400,713 Zm00001d038725 pebp7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 163,368,049 163,369,489 GRMZM2G179264 pebp8 Classical Gene Chr8 123,030,387 123,032,175 GRMZM2G179264 pebp8 Chr8 123,030,387 123,032,175 Zm00001d010752 pebp8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 126,880,531 126,882,389 GRMZM2G021614 pebp9 Classical Gene Chr8 8,472,799 8,475,229 Zm00001d008446 pebp9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 8,814,262 8,820,093 GRMZM2G083841 pep1 Classical Gene Chr9 62,306,266 62,311,673 Zm00001d046170 pep1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 68,851,094 68,856,482 GRMZM2G069542 pep2 from: BT085108 Chr5 144,847,481 144,855,080 Zm00001d016166 pep2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 148,208,167 148,215,925 GRMZM2G074122 pep3 originally from: X67471 (chr 4 hit) [and more strongly to chr5 B73 sequences assigned in Apr 2015] Chr4 227,807,369 227,818,655 Zm00001d053453 pep3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 232,245,967 232,253,821 GRMZM2G473001 pep4 Classical Gene Chr7 86,459,173 86,464,913 Zm00001d020057 pep4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 89,268,035 89,273,487 GRMZM2G087063 pet2 provided by A Barkan (2010) Chr1 80,629,933 80,632,693 Zm00001d029674 pet2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 82,234,517 82,237,350 GRMZM2G177145 pet3 Chr2 5,103,401 5,103,769 Zm00001d002054 pet3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 5,036,500 5,039,237 GRMZM5G841015 pex1 Classical Gene Chr2 231,055,349 231,059,232 GRMZM2G478929 pex2 Chr4 3,413,177 3,413,824 Zm00001d048715 pex2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 4,114,481 4,118,893 GRMZM2G059151 pfk1 from: T70624 Chr6 115,372,536 115,378,936 Zm00001d037278 pfk1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 119,172,801 119,179,266 GRMZM2G450163 pfk2 Liu et al., 2016 Chr1 221,791,929 221,796,752 GRMZM2G127798 pgd1 from: AF061838 Chr6 57,903,596 57,906,292 Zm00001d035925 pgd1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 60,489,299 60,491,983 GRMZM2G145715 pgd2 Classical Gene Chr3 153,964,271 153,968,156 Zm00001d042184 pgd2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 155,339,409 155,340,851 GRMZM2G440208 pgd3 Chr4 18,596,164 18,598,086 Zm00001d049187 pgd3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 19,755,800 19,757,563 GRMZM2G094811 pgl1 from: DQ421831 Chr6 99,520,235 99,522,243 Zm00001d036821 pgl1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 102,225,125 102,226,357 GRMZM2G320175 pgl2 Classical Gene Chr6 99,582,016 99,584,295 Zm00001d036823 pgl2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 102,273,075 102,274,307 GRMZM2G160526 pgl7 Chr6 99,103,865 99,105,564 Zm00001d036816 pgl7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 101,867,735 101,868,967 GRMZM2G394259 pgl8 Classical Gene Chr6 99,529,941 99,532,218 Zm00001d036822 pgl8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 102,234,771 102,236,003 GRMZM2G023289 pgm1 Based on homology to Genbank mRNA sequence. Chr1 267,953,427 267,960,205 Zm00001d033746 pgm1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 272,697,870 272,704,606 GRMZM2G109383 pgm2 Based on homology to Genbank mRNA sequence. Chr5 10,865,997 10,872,126 Zm00001d013428 pgm2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 11,195,010 11,201,017 GRMZM2G372632 pgr3 Belcher et al., 2015 Chr9 124,424,696 124,428,135 Zm00001d047307 pgr3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 126,209,552 126,212,827 GRMZM2G134955 phb1 Chr2 171,554,524 171,555,173 Zm00001d005485 phb1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 175,607,776 175,613,053 GRMZM2G107114 phb2 Chr10 123,209,142 123,210,706 Zm00001d025619 phb2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 124,227,762 124,229,007 GRMZM2G410710 phb3 Chr5 177,870,707 177,873,657 Zm00001d016979 phb3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 181,869,280 181,870,764 AC217358.3_FG005 phb4 Chr1 296,971,341 296,973,619 Zm00001d034795 phb4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 302,374,919 302,378,019 GRMZM2G039895 phd1 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 1,537,642 1,541,643 Zm00001d035008 phd1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 1,589,350 1,593,458 GRMZM2G335720 phd10 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 136,676,466 136,698,927 Zm00001d011158 phd10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 141,169,109 141,194,917 GRMZM2G408897 phd11 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 10,447,338 10,450,616 Zm00001d013416 phd11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 10,762,331 10,765,607 GRMZM2G455664 phd12 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 27,533,651 27,548,861 GRMZM2G059266 phd13 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 40,387,081 40,391,160 Zm00001d049736 phd13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 42,106,178 42,110,394 GRMZM2G178072 phd14 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 152,453,261 152,461,059 Zm00001d048385 phd14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 155,329,232 155,336,959 GRMZM2G173852 phd15 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 276,041,856 276,051,331 Zm00001d034004 phd15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 280,899,968 280,910,431 GRMZM2G168249 phd16 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 107,265,910 107,274,437 Zm00001d037086 phd16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 111,753,580 111,762,127 GRMZM2G155123 phd17 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 131,105,649 131,117,697 Zm00001d010974 phd17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 135,530,020 135,542,207 GRMZM2G443565 phd18 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 4,449,604 4,458,482 GRMZM2G412492 phd19 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 8,831,484 8,837,242 Zm00001d018912 phd19 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 9,117,216 9,136,917 GRMZM2G119357 phd2 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 216,523,958 216,531,563 Zm00001d032263 phd2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 219,629,525 219,630,314 GRMZM5G843893 phd20 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 1,903,989 1,908,431 GRMZM2G156129 phd21 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 29,170,751 29,171,909 GRMZM2G045544 phd22 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 203,702,356 203,707,024 Zm00001d017862 phd22 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 209,091,060 209,095,479 GRMZM2G103230 phd23 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 58,423,170 58,430,307 GRMZM2G434715 phd24 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 174,811,135 174,819,968 Zm00001d022583 phd24 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 180,328,539 180,337,389 GRMZM2G087482 phd25 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 7,451,874 7,467,413 Zm00001d013278 phd25 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 7,698,694 7,714,914 GRMZM2G316191 phd26 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 150,195,961 150,215,431 Zm00001d021541 phd26 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 155,404,186 155,420,422 GRMZM2G071613 phd27 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 36,768,420 36,771,264 Zm00001d045755 phd27 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 37,242,832 37,245,915 GRMZM2G068331 phd28 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 10,235,511 10,240,157 Zm00001d048969 phd28 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 11,098,504 11,103,144 GRMZM2G466270 phd29 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 65,470,804 65,484,230 Zm00001d014900 phd29 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 67,332,284 67,363,587 GRMZM2G097726 phd3 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 13,356,454 13,364,295 Zm00001d019039 phd3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 13,826,135 13,833,785 GRMZM2G091265 phd30 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 105,935,513 105,940,065 Zm00001d020361 phd30 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 109,153,947 109,156,282 GRMZM2G181158 phd31 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 201,783,834 201,787,692 Zm00001d006428 phd31 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 207,695,606 207,743,821 GRMZM2G134214 phd32 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 54,934,854 54,944,793 Zm00001d035862 phd32 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 57,387,932 57,398,301 GRMZM5G871463 phd33 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 79,026,612 79,032,492 Zm00001d050330 phd33 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 81,873,702 81,879,578 GRMZM2G158194 phd34 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 9,045,175 9,047,443 Zm00001d039579 phd34 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 8,262,683 8,264,981 GRMZM5G813111 phd35 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 276,177,130 276,182,727 Zm00001d034006 phd35 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 281,031,812 281,037,527 GRMZM5G889372 phd36 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 136,728,879 136,733,895 GRMZM2G473258 phd38 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 94,679,099 94,681,569 GRMZM2G385338 phd39 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 234,727,096 234,739,242 GRMZM2G365888 phd4 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 27,274,598 27,281,804 Zm00001d023914 phd4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 27,979,618 27,987,242 GRMZM2G081350 phd40 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 133,770,585 133,777,342 Zm00001d041708 phd40 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 134,378,935 134,385,716 GRMZM2G149587 phd42 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 156,446,973 156,452,761 Zm00001d011802 phd42 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 161,757,825 161,764,087 GRMZM2G025703 phd43 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 171,075,200 171,078,825 Zm00001d042613 phd43 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 173,685,114 173,686,104 GRMZM2G391413 phd5 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 239,865,653 239,878,509 GRMZM2G022945 phd6 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 48,527,429 48,531,044 Zm00001d028863 phd6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 48,930,452 48,937,928 GRMZM2G038050 phd8 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 148,985,897 148,996,435 Zm00001d026698 phd8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 150,307,587 150,319,013 GRMZM2G073581 phd9 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 141,102,389 141,111,678 Zm00001d026270 phd9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 142,437,417 142,472,462 GRMZM2G346455 phi002 Chr1 228,306,620 228,318,304 Zm00001d032605 phi002 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 231,856,279 231,868,220 GRMZM2G065083 phi1 from: U17225 Chr1 283,156,653 283,159,112 Zm00001d034256 phi1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 288,168,990 288,176,921 GRMZM2G380515 phm10525 Chr8 125,606,805 125,613,287 Zm00001d010842 phm10525 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 129,920,062 129,926,481 GRMZM2G069773 phm13360 Chr2 111,452,832 111,456,698 Zm00001d004472 phm13360 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 114,012,780 114,016,467 GRMZM2G022088 phm13823 Chr3 40,318,889 40,324,047 Zm00001d040360 phm13823 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 39,908,343 39,913,413 GRMZM2G067601 phm15278 Chr8 156,263,468 156,265,092 Zm00001d011786 phm15278 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 161,548,685 161,550,315 GRMZM2G098800 phm1558 Chr4 153,223,584 153,226,721 GRMZM2G003883 phm15899 Chr3 44,224,072 44,229,612 Zm00001d040446 phm15899 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 43,701,925 43,707,461 GRMZM2G096470 phm1675 Chr3 182,131,706 182,144,018 Zm00001d042962 phm1675 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 184,999,153 185,011,550 GRMZM2G080917 phm1959 Chr3 170,149,613 170,154,226 GRMZM2G472428 phm229 Chr9 30,063,256 30,088,418 Zm00001d045635 phm229 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 30,190,972 30,217,757 GRMZM2G076104 phm2343 Chr3 28,334,298 28,336,773 Zm00001d040109 phm2343 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 27,953,105 27,954,241 GRMZM2G119104 phm3226 Chr1 22,583,820 22,595,788 Zm00001d028098 phm3226 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 22,960,075 22,971,879 GRMZM2G041015 phm3342 Chr3 217,773,782 217,777,054 Zm00001d044184 phm3342 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 221,301,455 221,304,723 GRMZM2G023020 phm3457 Chr2 63,554,418 63,558,011 Zm00001d003878 phm3457 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 64,526,539 64,530,682 GRMZM2G072337 phm4341 Chr10 117,586,271 117,590,284 Zm00001d025433 phm4341 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 118,612,121 118,615,983 GRMZM2G092129 phm4353 Chr7 34,183,685 34,198,384 Zm00001d019472 phm4353 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 35,446,294 35,461,015 GRMZM2G325762 phm4880 Chr2 107,818,821 107,820,874 GRMZM2G112247 phm532 Chr5 193,782,893 193,784,506 Zm00001d017545 phm532 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 199,141,404 199,144,529 GRMZM2G345667 phm5822 Chr2 10,522,351 10,526,336 Zm00001d002345 phm5822 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 10,635,912 10,638,275 GRMZM2G313481 phm662 Chr5 1,045,283 1,050,017 GRMZM2G110408 phm8909 Chr9 110,677,553 110,681,978 Zm00001d046971 phm8909 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 113,591,821 113,595,110 GRMZM2G156713 phm9695 Chr8 12,285,354 12,288,966 Zm00001d008549 phm9695 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 12,681,028 12,684,611 GRMZM2G140107 phm9914 Chr3 161,295,516 161,301,138 Zm00001d042353 phm9914 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 162,856,701 162,862,617 GRMZM2G074158 pho1 Chr1 278,250,612 278,259,617 Zm00001d034074 pho1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 283,220,928 283,230,016 GRMZM2G085577 pho2 Chr3 179,031,418 179,040,320 Zm00001d042842 pho2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 181,808,569 181,820,628 GRMZM5G891944 phos1 Salazar-Vidal et al., 2016 Chr3 28,919,073 28,923,612 Zm00001d040125 phos1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 28,534,287 28,540,068 GRMZM2G466545 phos2 Salazar-Vidal et al., 2016 Chr4 171,946,555 171,952,268 Zm00001d051945 phos2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 174,987,519 174,992,037 GRMZM5G851655 phos3 cited as GRMZM2G058444 Salazar-Vidal et al., 2016 Chr5 215,112,901 215,114,452 Zm00001d018445 phos3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 220,941,468 220,946,307 GRMZM2G064657 phos4 Salazar-Vidal et al., 2016 Chr6 122,577,593 122,582,074 Zm00001d037468 phos4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 126,299,307 126,303,725 GRMZM2G001457 phot1 Classical Gene Chr3 229,220,592 229,241,592 Zm00001d044599 phot1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 233,046,742 233,055,445 GRMZM2G032351 phot2 from EU955535 Chr1 220,359,597 220,392,126 Zm00001d032353 phot2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 223,545,282 223,577,431 GRMZM2G172596 php20075a(gast) Chr10 2,649,738 2,651,194 GRMZM2G089056 php20537b Chr1 6,914,659 6,919,235 Zm00001d027504 php20537b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 6,907,596 6,912,220 GRMZM2G172751 php20603 Chr1 8,533,004 8,536,769 Zm00001d027590 php20603 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 8,573,955 8,577,898 GRMZM2G101818 php20608a Chr4 237,244,514 237,245,531 Zm00001d031338 php20654 possible overlap with AY110296 Chr1 186,729,080 186,739,316 GRMZM2G438824 php20682 Chr1 184,896,241 184,897,605 Zm00001d031346 php20682 Chr1 187,013,825 187,014,620 GRMZM2G076435 php20725a Chr4 5,044,212 5,046,753 GRMZM2G100103 phs1 from BT041980 Chr9 52,042,688 52,059,619 Zm00001d045993 phs1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 53,061,463 53,078,264 GRMZM2G326707 pht1 from: AY639019 Chr5 31,900,810 31,903,008 Zm00001d014116 pht1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 33,004,668 33,006,371 GRMZM2G075870 pht10 Chr1 8,032,558 8,034,556 GRMZM2G139639 pht11 Chr7 34,937,541 34,939,375 GRMZM2G009800 pht12 Chr2 99,926,376 99,930,029 GRMZM2G170208 pht13 Chr2 99,805,638 99,807,544 GRMZM2G154090 pht2 from: AY974041 Chr1 236,840,157 236,842,176 Zm00001d032850 pht2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 240,236,142 240,237,767 GRMZM2G045473 pht3 from: AY639021 Chr2 99,381,968 99,383,837 Zm00001d004301 pht3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 101,598,637 101,600,244 GRMZM2G159075 pht4 from: AY639022 Chr10 100,011,935 100,014,106 Zm00001d025028 pht4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 100,507,387 100,508,961 GRMZM2G041595 pht5 from: AY974045 Chr7 172,022,758 172,024,519 GRMZM5G881088 pht6 from: AY974046 Chr8 147,629,397 147,631,460 Zm00001d011498 pht6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 152,525,890 152,527,647 GRMZM2G112377 pht7 from: AY974043 Chr1 202,585,823 202,587,997 Zm00001d031875 pht7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 205,091,435 205,093,066 GRMZM2G009779 pht8 Chr2 99,885,266 99,886,925 GRMZM2G070087 pht9 Chr1 11,209,543 11,211,528 GRMZM2G157727 phyA1 Classical Gene Chr1 269,388,274 269,395,277 Zm00001d033799 phyA1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 274,078,397 274,085,766 GRMZM2G181028 phyA2 from: AY260865 Chr5 10,111,505 10,117,216 Zm00001d013402 phyA2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 10,472,063 10,479,079 GRMZM2G124532 phyB1 Classical Gene Chr1 50,023,180 50,034,523 Zm00001d028905 phyB1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 50,443,216 50,455,013 GRMZM2G092174 phyB2 Classical Gene Chr9 135,245,567 135,251,882 Zm00001d047632 phyB2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 137,491,058 137,497,818 GRMZM2G057935 phyC1 Classical Gene Chr1 277,059,620 277,064,623 Zm00001d034038 phyC1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 281,978,994 281,984,348 GRMZM2G129889 phyC2 Classical Gene Chr5 7,129,937 7,134,953 Zm00001d013262 phyC2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 7,372,367 7,382,139 GRMZM2G140101 phys1 from: U75531 Chr3 131,730,020 131,731,520 Zm00001d041660 phys1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 132,281,342 132,282,505 GRMZM2G043336 phys2 from: AJ223471 Chr3 132,181,945 132,183,468 Zm00001d041670 phys2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 132,769,221 132,770,390 GRMZM2G387528 pif3 from primers in Gao et al 2015; also assigned by the Grassius project, (Yilmaz et al 2009) Chr8 935,667 938,714 Zm00001d008205 pif3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 1,077,606 1,080,652 AC234161.1_FG001 piip1 Classical Gene Chr9 117,425,596 117,425,985 Zm00001d047117 piip1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 119,248,408 119,248,797 GRMZM2G300135 piip2 from: AF001635 Chr5 61,702,710 61,706,176 Zm00001d014794 piip2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 63,460,671 63,464,068 GRMZM2G103721 pik1 Chr4 71,658,540 71,668,712 Zm00001d050219 pik1 Chr4 74,335,082 74,344,859 GRMZM2G098643 pin1 From Forestan et al 2012 Chr9 3,650,989 3,654,397 Zm00001d044812 pin1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 3,291,763 3,295,059 GRMZM2G126260 pin10 from Forestan et al 2012 Chr3 214,980,803 214,985,892 Zm00001d044083 pin10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 218,523,216 218,528,077 GRMZM2G040911 pin11 from Forestan et al 2012 Chr2 192,510,578 192,514,240 Zm00001d006082 pin11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 197,602,488 197,606,112 GRMZM2G160496 pin12 from Forestan et al 2012 Chr9 16,732,113 16,734,511 Zm00001d045219 pin12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 16,477,975 16,480,410 GRMZM2G050089 pin14 from Forestan et al 2012 Chr3 185,812,392 185,817,191 Zm00001d043083 pin14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 188,687,080 188,692,074 GRMZM2G403601 pin15 Li et al, 2017 Chr3 20,120,984 20,121,889 GRMZM2G074267 pin2 from Forestan et al 2012 Chr5 206,777,162 206,780,578 Zm00001d018024 pin2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 212,254,262 212,257,744 GRMZM2G149184 pin3 aligns to sequence EU570251; see also Forestan et al 2012 Chr4 182,180,280 182,183,396 Zm00001d052269 pin3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 185,371,637 185,375,098 GRMZM2G171702 pin4 from Forestan et al 2012 Chr4 186,818,289 186,821,067 Zm00001d052442 pin4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 190,119,181 190,122,383 GRMZM2G025742 pin5 from Forestan et al 2012 Chr3 160,795,816 160,799,946 Zm00001d042345 pin5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 162,347,553 162,351,683 GRMZM2G148648 pin7 from Forestan et al 2012 Chr1 193,487,892 193,489,699 Zm00001d031594 pin7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 195,810,416 195,812,223 GRMZM5G839411 pin8 from Forestan et al 2012 Chr3 203,002,580 203,005,107 Zm00001d043660 pin8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 206,187,330 206,189,862 GRMZM5G859099 pin9 from Forestan et al 2012 Chr3 187,868,057 187,871,142 Zm00001d043179 pin9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 190,701,685 190,704,770 GRMZM2G174807 pip1a from: X82633 (chr 2 hit) Chr2 18,757,671 18,759,694 Zm00001d002690 pip1a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 19,342,470 19,344,477 AC209208.3_FG002 pip1b Classical Gene Chr5 193,359,341 193,362,190 Zm00001d017526 pip1b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 198,707,054 198,710,453 GRMZM2G392975 pip1d from: Entrez Gene 541886 Chr4 153,654,423 153,658,268 Zm00001d051403 pip1d Chr4 157,200,400 157,203,987 GRMZM2G081843 pip1e Classical Gene Chr4 170,004,633 170,006,133 Zm00001d051872 pip1e Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 172,964,877 172,966,249 GRMZM2G136032 pip1f Classical Gene Chr9 6,467,685 6,469,385 Zm00001d020383 pip1f Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 110,507,409 110,508,756 GRMZM2G178693 pip2a Classical Gene Chr2 28,493,204 28,495,467 Zm00001d003006 pip2a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 29,275,928 29,278,172 GRMZM2G092125 pip2b Classical Gene Chr2 169,186,912 169,190,423 Zm00001d005421 pip2b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 173,378,742 173,382,478 GRMZM2G081192 pip2c Classical Gene Chr4 143,891,075 143,894,123 Zm00001d051174 pip2c Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 147,173,978 147,176,860 GRMZM2G154628 pip2d Classical Gene Chr5 195,239,679 195,242,694 Zm00001d017288 pip2d Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 191,817,119 191,819,914 GRMZM2G014914 pip2e Classical Gene Chr7 41,435,006 41,438,812 Zm00001d019563 pip2e Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 42,951,695 42,954,861 GRMZM2G047368 pip2f Classical Gene Chr7 41,553,959 41,555,454 Zm00001d019565 pip2f Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 43,071,903 43,073,370 GRMZM2G440198 pipf1 Yang et al., 2017 Chr9 16,333,284 16,334,382 GRMZM2G309025 pk3 Chr7 156,513,100 156,515,973 Zm00001d021737 pk3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 161,870,516 161,872,996 GRMZM2G014833 pk4 Classical Gene Chr3 195,572,570 195,576,335 Zm00001d043389 pk4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 198,491,982 198,495,758 GRMZM2G018728 pki1 Classical Gene Chr1 52,805,139 52,807,763 Zm00001d028963 pki1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 53,142,425 53,144,911 GRMZM2G091302 pks1 from: EU967359 Chr2 8,724,139 8,731,931 Zm00001d002246 pks1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 8,903,282 8,911,060 GRMZM2G701063 pl1 Classical Gene Chr6 108,491,299 108,492,380 Zm00001d037118 pl1 Chr6 112,978,409 112,979,673 GRMZM2G408887 platz1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 39,877,358 39,878,626 Zm00001d028594 platz1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 40,221,978 40,223,031 GRMZM2G323553 platz10 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 124,275,861 124,276,933 Zm00001d015868 platz10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 127,438,923 127,439,977 GRMZM2G004548 platz11 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 198,868,436 198,870,185 Zm00001d017682 platz11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 204,120,837 204,122,561 GRMZM2G093270 platz13 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 112,352,112 112,354,428 Zm00001d047025 platz13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 115,708,968 115,711,076 GRMZM2G077495 platz14 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 122,343,878 122,349,453 Zm00001d047250 platz14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 124,047,961 124,049,024 GRMZM2G086403 platz15 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 135,709,748 135,712,426 Zm00001d026047 platz15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 136,891,564 136,893,726 GRMZM2G311656 platz2 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 69,256,093 69,257,978 Zm00001d029437 platz2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 70,442,356 70,448,204 GRMZM2G094168 platz3 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 98,770,498 98,772,402 Zm00001d030032 platz3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 101,087,719 101,089,690 GRMZM2G171934 platz4 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 204,103,938 204,106,057 Zm00001d031925 platz4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 206,932,526 206,934,498 GRMZM2G131280 platz5 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 13,553,048 13,555,243 Zm00001d002489 platz5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 13,850,163 13,852,195 GRMZM2G342691 platz6 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 152,864,604 152,869,253 Zm00001d051376 platz6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 156,414,146 156,415,564 GRMZM2G091044 platz7 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 157,531,940 157,533,735 Zm00001d051511 platz7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 160,984,327 160,986,154 GRMZM2G017882 platz8 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 85,901,285 85,902,702 Zm00001d015394 platz8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 88,146,164 88,150,303 GRMZM2G070295 platz9 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 95,257,993 95,259,419 Zm00001d015560 platz9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 97,682,870 97,684,322 GRMZM5G889467 plc1 Chr5 65,559,888 65,563,651 GRMZM2G054559 pld1 from: D73410 Chr3 12,195,404 12,200,349 Zm00001d039670 pld1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 11,500,060 11,504,969 GRMZM2G108912 pld10 Chen et al., 2016 Chr2 197,187,325 197,194,172 GRMZM2G140811 pld11 Chen et al., 2016 Chr7 175,225,393 175,232,833 GRMZM2G145944 pld12 Chen et al., 2016 Chr2 171,514,014 171,519,145 GRMZM2G066485 pld13 Chen et al., 2016 Chr6 138,879,310 138,901,971 GRMZM2G158008 pld14 Chr8 33,876,556 33,895,080 GRMZM2G312438 pld15 Chr1 4,034,105 4,039,749 GRMZM2G343588 pld16 Chr8 33,850,982 33,854,872 GRMZM5G865943 pld17 Chr5 70,898,275 70,901,412 GRMZM2G061969 pld2 Chen et al., 2016 Chr8 17,391,163 17,395,926 GRMZM2G438378 pld3 Chen et al., 2016 Chr6 128,905,006 128,908,832 GRMZM2G043340 pld4 Chen et al., 2016 Chr6 94,011,753 94,013,434 GRMZM2G442551 pld5 Chen et al., 2016 Chr9 90,709,327 90,713,727 GRMZM2G019029 pld6 Chen et al., 2016 Chr9 121,042,044 121,044,689 GRMZM2G179792 pld7 Chen et al., 2016 Chr1 67,777,685 67,781,676 GRMZM2G159125 pld8 Chen et al., 2016 Chr2 182,836,551 182,840,311 GRMZM2G133943 pld9 Chen et al., 2016 Chr1 80,976,254 80,982,317 GRMZM2G071450 ploc1 Chr6 54,372,730 54,374,538 Zm00001d035859 ploc1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 56,821,519 56,821,986 GRMZM2G078409 ploc2 from sequence EU955234 Chr2 24,166,809 24,167,435 GRMZM2G037104 pls1 from: Z29518 Chr2 230,276,620 230,282,304 Zm00001d007638 pls1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 236,708,454 236,714,123 GRMZM5G878139 pls2 from: AI622087 Chr4 4,398,962 4,410,023 Zm00001d048766 pls2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 5,217,092 5,228,295 GRMZM2G101958 plt1 Classical Gene (from: J04176) Chr10 4,168,397 4,169,548 Zm00001d023343 plt1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 3,824,749 3,825,745 GRMZM2G010868 plt2 Classical Gene Chr3 230,694,240 230,696,031 Zm00001d044686 plt2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 234,930,037 234,930,396 GRMZM2G126397 plt3 Chr3 184,490,364 184,491,451 Zm00001d043049 plt3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 187,419,504 187,420,504 GRMZM2G174680 plt4 Chr1 52,623,482 52,624,713 Zm00001d028973 plt4 Chr1 53,309,064 53,309,600 GRMZM2G005991 plt5 Chr1 287,217,033 287,218,320 GRMZM2G116167 plt6 Chr5 60,007,150 60,008,477 GRMZM2G125356 pme1 Chr10 122,250,862 122,253,051 Zm00001d025588 pme1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 123,299,914 123,302,351 GRMZM2G046618 pme2 Hawkins et al., 2014 Chr9 11,632,550 11,635,276 Zm00001d045048 pme2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 11,038,810 11,041,663 GRMZM5G833389 pmg1 Classical Gene Chr8 170,315,932 170,320,657 Zm00001d012518 pmg1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 176,004,430 176,009,389 GRMZM2G019260 pmk1 Chr1 34,940,742 34,950,638 GRMZM2G029824 pmp1 from Cell Genomics Project (Oct 2013) Chr1 3,701,760 3,704,275 Zm00001d027366 pmp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 3,805,137 3,807,525 GRMZM2G153369 pmpm2 from alignment to sequence in Fu et al (2012), and to accession EU959002 Chr2 199,044,953 199,046,279 Zm00001d006329 pmpm2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 204,888,454 204,889,753 GRMZM2G079306 pmpm3 aligns to cDNA EU962407 and to sequence file [Fu et al 2012) Chr9 12,875,822 12,883,410 Zm00001d045096 pmpm3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 12,384,425 12,385,209 GRMZM2G179462 pmpm4 from alignment to sequence file in Fu et al 2012, and to EU954642 Chr1 43,986,382 43,987,175 Zm00001d028718 pmpm4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 44,179,372 44,180,241 GRMZM2G477325 pmpm5 from alignment to sequence in Fu et al (2012), and to sequence accession EU975274 Chr7 168,441,642 168,442,771 Zm00001d022264 pmpm5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 173,953,537 173,954,457 GRMZM2G099984 pmpm7 from sequence in Fu et al (2012), and aligment to sequence accession EU955642 Chr8 853,213 853,915 Zm00001d008200 pmpm7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 985,128 985,854 GRMZM2G066870 pmpm8 aligns to sequence in Fu et al 2012, and to sequence accession EU971491 Chr3 49,118,179 49,119,770 Zm00001d040544 pmpm8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 48,922,461 48,923,574 GRMZM2G023422 pol1 Udy et al, 2012 Chr10 71,277,936 71,288,557 Zm00001d024423 pol1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 70,399,874 70,412,898 GRMZM2G114459 polm1 Chr1 2,088,572 2,102,312 GRMZM5G828278 polm2 Chr9 155,361,528 155,366,191 GRMZM5G844080 polm2 Chr9 155,371,097 155,373,747 Zm00001d048541 polm2 Chr9 158,173,924 158,186,211 GRMZM2G053588 polm3 Chr9 28,392,287 28,396,846 GRMZM2G153792 polm3 Chr9 28,406,066 28,413,513 Zm00001d045603 polm3 Chr9 28,436,212 28,457,275 GRMZM2G078154 pop1 Chr1 222,814,335 222,827,732 Zm00001d032430 pop1 Chr1 226,164,158 226,177,345 GRMZM2G155021 por1 from: X73429 Chr8 139,629,328 139,632,254 Zm00001d011242 por1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 144,285,793 144,288,703 GRMZM2G125023 por2 from: AF326503 Chr10 139,149,943 139,152,962 GRMZM2G104394 pox1 from B73_v3 alignment sequence AJ401274 Chr3 59,039,454 59,047,011 Zm00001d040702 pox1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 59,064,582 59,072,226 GRMZM2G040638 pox2 B73_V3 reference genome alignment to sequence AJ401275.1 (MLS 2015) Chr1 63,648,608 63,650,100 Zm00001d029274 pox2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 64,514,340 64,515,829 GRMZM2G135108 pox3 from alignment of B73_V3 to sequence AJ401276.1 (MLS 20150) Chr6 125,194,486 125,196,087 Zm00001d037547 pox3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 128,952,506 128,954,001 GRMZM2G178074 ppck1 from B73_V2 aligment to sequence AY911413 Chr5 214,764,762 214,766,299 Zm00001d018429 ppck1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 220,588,216 220,589,696 GRMZM2G135091 ppck2 B73_v2 alignment to sequence AY911414 Chr4 143,105,617 143,107,036 Zm00001d051156 ppck2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 146,401,256 146,402,641 GRMZM2G096753 ppck3 from B73_v2 alignment to AY911415 Chr5 186,556,056 186,557,725 Zm00001d017270 ppck3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 191,243,684 191,245,128 GRMZM2G049541 ppck4 from B73_V2 alignment to AY911416 Chr2 30,268,597 30,270,037 Zm00001d003068 ppck4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 31,084,436 31,085,836 GRMZM6G924006 ppd1 Chr1 151,734,051 151,736,151 GRMZM2G326111 ppi1 from: BT042680 Chr5 167,791,848 167,793,057 Zm00001d016660 ppi1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 171,710,734 171,711,252 GRMZM5G851266 ppo1 Chr10 59,669,631 59,671,907 Zm00001d000001 ppo1 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73V4_ctg150 48,820 51,164 GRMZM2G090718 ppp1 Classical Gene Chr5 210,643,769 210,647,890 GRMZM2G428579 ppr100 Chr9 118,298,087 118,300,177 GRMZM2G012174 ppr102 Chr3 200,829,117 200,833,808 GRMZM2G170896 ppr103 Hammani et al., 2016 Chr2 234,360,122 234,362,918 Zm00001d007838 ppr103 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 240,577,564 240,580,182 GRMZM2G099604 ppr13 Chr5 4,335,522 4,337,752 GRMZM2G050697 ppr152 from B73_v2 Chr3 206,557,927 206,560,435 Zm00001d043778 ppr152 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 209,949,057 209,951,249 GRMZM2G341621 ppr2 from B73_v2 alignment to cDNA EU956685 |gi| 195613945 (July 2011) Chr7 2,584,810 2,587,604 Zm00001d018693 ppr2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 2,686,485 2,689,002 AC215198.3_FG002 ppr2263 from Sosso et al 2012 Chr9 12,723,540 12,725,903 Zm00001d045089 ppr2263 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 12,194,663 12,197,108 GRMZM2G333678 ppr36 Chr4 15,638,404 15,640,330 Zm00001d026654 ppr4 no good match in v3; excellent hit in v4 Chr10 149,493,855 149,501,735 GRMZM2G025409 ppr5 Classical Gene Chr4 181,456,446 181,458,981 GRMZM2G025409 ppr5 from alignment of B73_v2 to cDNA EU037901 | GI:154520280 (July 2011) Chr4 181,456,446 181,458,981 Zm00001d052240 ppr5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 184,369,041 184,371,794 GRMZM2G337701 ppr521 Wei & Han, 2016 scaffold_498 111,300 114,195 GRMZM2G438524 ppr53 Zoschke et al., 2015 Chr1 299,484,354 299,486,920 Zm00001d034892 ppr53 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 304,951,395 304,953,545 GRMZM2G005938 ppr*-59040 Chr10 60,236,510 60,241,598 Zm00001d024248 ppr*-59040 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 59,441,463 59,446,450 GRMZM2G093291 ppr6 Chr9 26,487,832 26,491,734 GRMZM2G341479 ppr61 Chr5 204,809,810 204,811,353 GRMZM2G475897 ppr*-GRMZM2G475897 Chr1 180,544,078 180,547,525 Zm00001d031217 ppr*-GRMZM2G475897 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 182,484,848 182,492,517 GRMZM2G164202 pprsmr4 Chr5 70,802,337 70,804,170 Zm00001d015030 pprsmr4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 72,784,523 72,786,344 GRMZM2G047404 ppt1 from: U66403 Chr2 173,925,593 173,929,511 Zm00001d005542 ppt1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 178,096,528 178,100,358 GRMZM2G103047 ppt2 from: U66404 Chr7 82,105,784 82,109,932 Zm00001d020004 ppt2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 85,031,197 85,035,323 GRMZM2G025832 pr1 from B73_v2 alignment to GenBank locus HQ699781 Chr5 180,084,037 180,086,107 Zm00001d017077 pr1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 184,494,219 184,496,209 GRMZM2G120047 prc1 Classical Gene Chr6 81,137,995 81,139,170 Zm00001d036319 prc1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 84,001,793 84,002,545 GRMZM2G111566 prc2 from homology to Genbank sequence EU952592 Chr5 12,576,565 12,579,887 Zm00001d013505 prc2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 12,944,261 12,947,289 GRMZM2G472167 prc3 from homology to Genbank sequence EU957210 Chr1 8,552,957 8,556,040 Zm00001d027593 prc3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 8,596,506 8,599,611 GRMZM2G171604 prc4 from homology to Genbank sequence AY109445 Chr5 116,903,623 116,911,871 Zm00001d015788 prc4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 119,713,521 119,721,731 GRMZM2G049915 prcw1 from homology to Genbank sequence EU941682 Chr10 36,785,988 36,787,819 Zm00001d024027 prcw1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 37,879,487 37,880,623 GRMZM2G079452 prda1 Belcher et al., 2015 Chr4 16,807,094 16,815,389 Zm00001d049152 prda1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 17,892,779 17,899,598 GRMZM2G072861 prep2 Chr5 209,718,873 209,720,882 GRMZM2G074361 prf1 Classical Gene Chr6 160,357,192 160,358,354 Zm00001d038783 prf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 164,327,814 164,329,029 GRMZM2G109842 prf2 from: Entrez Gene 542410 Chr8 124,237,915 124,239,012 Zm00001d010797 prf2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 128,115,856 128,116,962 GRMZM5G876285 prf3 from: EU960514 Chr8 174,848,342 174,876,645 Zm00001d012773 prf3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 180,621,908 180,623,041 GRMZM5G877388 prf5 from: Entrez Gene 542625 Chr9 19,041,804 19,045,538 GRMZM2G112240 prh1 Classical Gene Chr4 170,944,444 170,947,965 Zm00001d051898 prh1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 173,925,846 173,928,349 GRMZM2G019819 prh10 Xiang, YL et al. 2016 Chr2 103,675,901 103,679,774 GRMZM2G159811 prh11 Xiang, YL et al. 2016 Chr10 101,377,174 101,382,475 GRMZM2G177386 prh12 Chr6 161,744,096 161,747,484 Zm00001d038846 prh12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 165,730,468 165,734,191 GRMZM2G134628 prh13 Xiang, YL et al. 2016 Chr3 220,928,320 220,934,085 GRMZM2G102255 prh14 Xiang, YL et al. 2016 Chr6 167,604,993 167,607,983 GRMZM2G383807 prh15 Xiang, YL et al. 2016 Chr8 77,501,631 77,504,702 GRMZM2G056572 prh16 Chr2 3,973,404 3,978,693 GRMZM2G164352 prh17 Wang et al., 2017 Chr6 64,676,766 64,683,561 GRMZM2G140288 prh2 From homology to genbank sequence BT068007 Chr7 167,183,707 167,192,292 Zm00001d022202 prh2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 172,755,383 172,761,407 GRMZM2G059453 prh3 Xiang, YL et al. 2016 Chr3 180,096,139 180,098,099 GRMZM2G166297 prh4 Xiang, YL et al. 2016 Chr8 168,030,486 168,032,471 GRMZM2G010855 prh5 Xiang, YL et al. 2016 Chr1 39,144,013 39,146,119 GRMZM2G308615 prh6 Xiang, YL et al. 2016 Chr7 89,059,718 89,061,311 GRMZM2G082487 prh7 Xiang, YL et al. 2016 Chr2 176,186,305 176,187,719 GRMZM2G122228 prh8 Xiang, YL et al. 2016 Chr3 212,913,668 212,919,667 GRMZM5G818101 prh9 Xiang, YL et al. 2016 Chr8 72,141,439 72,143,820 GRMZM2G119906 prin2 Williams-Carrier et al. 2014 Chr2 178,872,908 178,874,445 Zm00001d005694 prin2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 183,651,912 183,653,332 GRMZM2G162529 prk1 from Cell Genomics Project (Oct 2013) Chr5 199,643,154 199,645,484 Zm00001d017711 prk1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 204,910,256 204,912,526 GRMZM2G133919 prl1 Chr5 216,749,557 216,756,161 Zm00001d018535 prl1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 222,621,124 222,631,121 GRMZM2G409309 prm5 Olukolu, BA et al. 2016 Chr3 56,470,193 56,479,063 Zm00001d040652 prm5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 56,429,593 56,438,793 GRMZM2G375504 pro1 Wang et al., 2014 Chr8 95,226,658 95,237,335 Zm00001d010056 pro1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 97,510,673 97,521,556 GRMZM5G899080 propep1 B73_v2 model provided by A Huffaker Chr2 6,583,856 6,584,704 Zm00001d002137 propep1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 6,508,338 6,509,353 GRMZM2G339117 propep3 B73_v2 gene model provided by A Huffaker 5/2013 Chr2 6,597,929 6,598,629 Zm00001d002138 propep3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 6,519,765 6,520,292 GRMZM2G141133 propep4 B73_v2 gene model provided by A Huffaker 5/2013 Chr10 72,626,088 72,626,699 Zm00001d024458 propep4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 71,754,227 71,754,826 GRMZM2G141071 propep5 B73_v2 gene model provided by A Huffaker 5/2013 Chr10 72,636,057 72,636,866 Zm00001d024460 propep5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 71,764,322 71,764,927 AC205274.3_FG001 prp1 Classical Gene Chr8 51,816,721 51,817,224 Zm00001d009296 prp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 52,923,857 52,924,360 GRMZM2G102356 prp2 Classical Gene Chr2 41,216,939 41,217,919 Zm00001d003379 prp2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 42,234,465 42,235,544 GRMZM2G117989 prp3 from: X82184 Chr4 9,662,595 9,664,016 Zm00001d048947 prp3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 10,513,764 10,514,291 GRMZM2G465226 prp4 from: U82200 Chr7 3,487,009 3,488,071 Zm00001d018738 prp4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 3,653,618 3,654,109 GRMZM2G402631 prp5 Christensen et al., 2015 Chr1 178,035,095 178,036,072 Zm00001d031158 prp5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 179,966,643 179,967,167 GRMZM2G039396 prpo1 from AF218052 alignment to B73_V3 Chr8 876,212 882,478 Zm00001d008203 prpo1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 1,019,559 1,026,656 GRMZM2G364901 prpo2 from AF273767 alignment to B73_V2 Chr2 35,316,673 35,329,767 Zm00001d003214 prpo2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 36,238,478 36,251,590 GRMZM2G320307 prr1 Chr5 201,317,849 201,326,036 Zm00001d017786 prr1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 206,748,709 206,751,630 GRMZM2G177792 prx35 Lopez-Castillo et al., 2015 Chr10 86,298,080 86,299,400 Zm00001d024753 prx35 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 86,312,505 86,313,524 GRMZM5G849107 ps1 Classical Gene Chr5 100,737,438 100,739,288 Zm00001d015651 ps1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 103,229,657 103,231,129 GRMZM2G100976 psa1 Chr6 88,729,231 88,730,546 Zm00001d036521 psa1 Chr6 91,157,618 91,158,864 GRMZM2G021687 psa2 Fristedt et al., 2014 Chr1 197,879,675 197,881,628 Zm00001d031738 psa2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 200,303,755 200,305,654 GRMZM2G051403 psa3 Shen et al., 2017 Chr5 7,706,026 7,707,915 GRMZM2G012397 psa6 Entrez Gene 100286020 Chr7 5,134,217 5,135,120 Zm00001d018797 psa6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 5,387,875 5,388,613 GRMZM2G024150 psad1 from: AF147726 Chr5 3,530,018 3,531,150 Zm00001d013039 psad1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 3,603,517 3,604,227 GRMZM2G451224 psah1 From homology to Genbank accession AF052076 Chr6 164,173,766 164,175,105 Zm00001d038984 psah1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 168,207,284 168,208,191 GRMZM2G080107 psan1 From homology to Genbank sequence BT040227 Chr3 138,460,913 138,462,021 Zm00001d041819 psan1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 139,135,030 139,136,095 GRMZM2G102838 psb1 Belcher et al., 2015 Chr6 81,891,034 81,893,207 Zm00001d036340 psb1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 84,776,706 84,778,799 GRMZM2G033885 psb29 Entrez Gene 542478 Chr7 157,314,547 157,315,990 Zm00001d021763 psb29 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 162,636,525 162,637,839 GRMZM2G174984 psb3 from: BT085953 Chr4 27,121,588 27,123,964 Zm00001d049387 psb3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 28,605,301 28,606,526 GRMZM5G834496 psbJ (cp) Wei & Han, 2016 ChrPt 63,347 63,469 GRMZM2G077333 psbs1 from: AY291061 Chr3 174,868,242 174,870,828 Zm00001d042697 psbs1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 177,338,945 177,341,399 GRMZM2G438551 psei1 Classical Gene Chr3 187,772,204 187,778,415 Zm00001d043175 psei1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 190,628,817 190,634,540 GRMZM2G030717 psei10 Chr8 162,128,796 162,129,551 GRMZM2G012160 psei2 Classical Gene Chr8 170,965,314 170,968,006 Zm00001d012561 psei2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 176,655,420 176,657,307 GRMZM2G440968 psei3 Chr6 155,861,031 155,863,018 Zm00001d038558 psei3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 159,804,909 159,805,962 GRMZM2G013461 psei4 Chr8 3,347,946 3,350,818 Zm00001d008268 psei4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 3,546,648 3,549,333 GRMZM2G024264 psei5 Chr6 146,669,647 146,672,066 GRMZM2G401328 psei6 Chr1 79,139,823 79,140,627 Zm00001d029630 psei6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 80,665,246 80,665,596 GRMZM2G148925 psei7 Chr1 79,075,655 79,077,147 Zm00001d029628 psei7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 80,600,855 80,601,549 GRMZM2G401374 psei8 Chr1 79,147,344 79,148,016 Zm00001d029631 psei8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 80,672,733 80,673,116 AC196110.4_FG004 psei9 from alignment of cloning primers in van der Linde et al 2012 Chr4 15,343,574 15,344,100 GRMZM2G044194 psk1 from: BK000133 Chr7 3,025,543 3,026,306 Zm00001d018727 psk1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 3,152,513 3,153,505 GRMZM2G079290 psk2 Chr3 143,262,466 143,263,677 GRMZM2G084859 psk3 from: BK000135 Chr9 145,248,876 145,249,788 Zm00001d048006 psk3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 147,801,693 147,802,711 GRMZM2G031261 psk4 from: BK000136 Chr10 4,752,399 4,753,182 Zm00001d023385 psk4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 4,347,611 4,348,392 GRMZM2G016677 pspb1 from Entrez Gene 107648855 Chr2 237,620,514 237,622,123 GRMZM2G047954 pspb2 from sequence AY103732 Chr7 4,799,319 4,801,203 GRMZM2G149317 psy2 Chr8 167,823,550 167,826,600 Zm00001d012394 psy2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 173,522,111 173,525,090 Zm00001d021410 psy3 v4 Chr7 151,481,395 151,484,398 GRMZM2G091419 ptac10 from: AFW84282 Chr8 163,288,195 163,292,627 Zm00001d012141 ptac10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 168,732,016 168,736,038 GRMZM5G897926 ptac12 from: BT042419 & Williams-Carrier et al. 2014 Chr3 193,671,883 193,678,209 Zm00001d043325 ptac12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 196,559,859 196,566,398 GRMZM5G807767 ptac14 Belcher et al., 2015 Chr8 76,011,360 76,016,337 Zm00001d009723 ptac14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 77,904,227 77,909,237 GRMZM2G180418 ptac17 Chr5 214,171,178 214,181,309 GRMZM2G306104 ptac18 Chr1 106,505,916 106,506,716 GRMZM2G122116 ptac2 from: DAA64282 Chr7 175,323,051 175,332,481 Zm00001d022599 ptac2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 180,824,817 180,834,362 GRMZM2G024530 ptf1 Chr9 11,565,132 11,570,108 GRMZM2G050596 pth1 Chr3 206,596,608 206,608,212 Zm00001d043779 pth1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 209,987,653 209,999,017 GRMZM2G328785 ptk1 Classical Gene Chr6 133,823,627 133,826,469 Zm00001d037783 ptk1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 137,664,274 137,666,727 GRMZM2G099754 ptk2 from: Entrez Gene 100283338 Chr4 185,250,108 185,255,064 Zm00001d052376 ptk2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 188,525,182 188,530,268 GRMZM2G151216 ptk3 from alignment to GenBank acsession AF24304 to B73_V2 assembly Chr1 190,127,790 190,130,328 Zm00001d031509 ptk3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 192,301,631 192,304,353 AC217842.3_FG001 ptk4 alignment of GenBank accession M62985 to B73_v2 Chr2 156,421,058 156,425,687 Zm00001d005135 ptk4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 160,460,364 160,465,842 GRMZM2G473511 ptk5 from: AF100769 Chr8 9,436,053 9,438,289 Zm00001d008477 ptk5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 9,807,195 9,830,853 GRMZM5G867390 ptr1 from Tnani et al 2013 Chr1 269,419,683 269,424,715 Zm00001d033800 ptr1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 274,110,065 274,115,179 AC211276.4_FG008 pve1 from Zhang et al 2012 Chr5 16,435,871 16,436,953 Zm00001d013672 pve1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 17,000,666 17,001,748 GRMZM2G134947 px13 from: AF037031 and AF037033 Chr5 32,055,951 32,057,280 Zm00001d014123 px13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 33,202,990 33,204,555 GRMZM2G108219 px14 from: Y13905 Chr2 25,437,820 25,439,417 Zm00001d002897 px14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 26,123,823 26,125,478 GRMZM2G427815 px3 Chr7 172,809,274 172,811,080 Zm00001d022457 px3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 178,107,698 178,109,315 GRMZM2G450233 px5 Chr6 125,337,844 125,340,176 Zm00001d037550 px5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 129,101,873 129,103,497 GRMZM5G809292 pyg7 Chr7 145,184,348 145,188,920 Zm00001d021368 pyg7 Chr7 150,079,651 150,084,317 GRMZM2G033526 pyk1 Chr1 97,682,229 97,687,870 Zm00001d030020 pyk1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 99,945,344 99,950,682 GRMZM2G004534 pyk2 Chr10 4,697,235 4,702,142 Zm00001d023379 pyk2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 4,293,119 4,298,209 GRMZM2G144730 pyk3 Pouvreau et al 2011 Chr9 113,493,606 113,499,029 Zm00001d047054 pyk3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 116,805,364 116,810,796 GRMZM2G320099 pyrd1 from Husnain et al 2013 Chr1 3,704,159 3,706,769 Zm00001d027367 pyrd1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 3,807,343 3,810,146 GRMZM2G090068 pyrr1 Hasnain et al., 2013 Chr5 160,118,507 160,129,431 Zm00001d016475 pyrr1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 163,826,847 163,837,823 GRMZM2G007721 pza00048 Chr10 98,714,259 98,732,307 Zm00001d025003 pza00048 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 99,104,436 99,134,098 GRMZM2G121790 pza00067 Chr4 229,199,657 229,204,882 Zm00001d053548 pza00067 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 233,637,127 233,642,207 GRMZM2G040634 pza00111 Chr7 139,402,429 139,406,268 GRMZM2G314292 pza00131 Chr1 203,986,419 203,987,178 Zm00001d031921 pza00131 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 206,850,565 206,850,807 GRMZM2G104258 pza00132 Chr7 31,785,259 31,790,644 Zm00001d019423 pza00132 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 33,001,953 33,007,315 GRMZM2G110408 pza00152 Chr9 110,677,553 110,681,978 GRMZM2G012923 pza00270 Chr5 151,484,639 151,489,634 Zm00001d016274 pza00270 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 155,133,354 155,138,211 GRMZM2G364068 pza00271 Chr4 172,551,715 172,560,136 Zm00001d051967 pza00271 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 175,609,307 175,611,318 GRMZM2G142072 pza00285 Chr9 8,949,490 8,962,539 Zm00001d044971 pza00285 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 8,641,891 8,655,103 GRMZM2G022088 pza00297 Chr3 40,318,889 40,324,047 GRMZM2G002578 pza00316 Chr3 225,185,182 225,186,943 Zm00001d044464 pza00316 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 228,879,986 228,881,480 GRMZM2G011173 pza00332 Chr4 189,215,297 189,219,182 Zm00001d052561 pza00332 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 193,202,058 193,205,855 GRMZM2G153087 pza00363 Chr3 135,934,895 135,940,205 GRMZM2G118917 pza00381 Chr1 238,384,036 238,403,459 Zm00001d032894 pza00381 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 241,894,333 241,913,759 GRMZM2G122443 pza00413 Chr3 128,928,165 128,931,335 Zm00001d041603 pza00413 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 129,427,114 129,430,257 GRMZM2G434696 pza00424 Chr7 174,820,350 174,831,406 Zm00001d022584 pza00424 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 180,337,187 180,348,782 GRMZM2G002959 pza00473 Chr6 124,328,526 124,334,707 Zm00001d037521 pza00473 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 128,039,738 128,045,204 GRMZM2G047095 pza00495 Chr2 173,887,377 173,894,291 Zm00001d005539 pza00495 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 178,058,279 178,065,291 GRMZM2G101181 pza00497 Chr2 20,541,703 20,545,865 Zm00001d002742 pza00497 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 21,198,460 21,202,631 GRMZM2G152127 pza00538 Chr3 208,546,055 208,552,820 Zm00001d043851 pza00538 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 212,034,975 212,041,814 GRMZM2G164475 pza00667 Chr3 162,783,765 162,786,921 Zm00001d042395 pza00667 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 164,412,499 164,415,646 GRMZM2G049525 pza00726 Chr4 53,468,183 53,474,421 Zm00001d049958 pza00726 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 55,678,978 55,684,958 GRMZM2G030529 pza00752 Chr1 82,020,741 82,030,263 Zm00001d029714 pza00752 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 83,647,801 83,656,803 GRMZM2G081652 pza00783 Chr3 173,515,706 173,518,871 Zm00001d042664 pza00783 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 175,917,267 175,920,386 GRMZM2G101042 pza00793 Chr8 65,656,733 65,662,011 Zm00001d009495 pza00793 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 67,221,503 67,222,084 GRMZM2G313481 pza00818 Chr5 1,045,283 1,050,017 GRMZM2G031584 pza00827 Chr3 156,830,533 156,833,606 Zm00001d042269 pza00827 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 158,421,207 158,424,170 GRMZM2G054380 pza00838 Chr8 159,782,943 159,797,629 Zm00001d011956 pza00838 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 165,140,334 165,155,029 GRMZM2G089121 pza00944 Chr1 89,006,779 89,009,728 Zm00001d029865 pza00944 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 90,965,701 90,968,044 GRMZM2G038964 pza00978 Chr1 284,081,140 284,083,876 Zm00001d034319 pza00978 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 289,129,916 289,132,811 GRMZM2G072337 pza01089 Chr10 117,586,271 117,590,284 GRMZM2G041015 pza01154 Chr3 217,773,782 217,777,054 GRMZM2G102596 pza01272 Chr9 18,903,400 18,906,316 Zm00001d045315 pza01272 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 18,806,523 18,809,336 GRMZM2G089517 pza01304 Chr5 179,240,778 179,243,919 Zm00001d017043 pza01304 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 183,518,512 183,521,743 GRMZM2G061681 pza01360 Chr3 225,532,457 225,540,553 Zm00001d044478 pza01360 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 229,247,796 229,256,127 GRMZM2G059108 pza01396 Chr3 166,420,293 166,422,669 Zm00001d042476 pza01396 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 168,999,383 169,003,373 GRMZM2G103230 pza01527 Chr6 58,423,170 58,430,307 Zm00001d035933 pza01527 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 61,046,505 61,053,692 GRMZM2G403007 pza01552 Chr6 129,885,873 129,886,948 Zm00001d037677 pza01552 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 133,754,895 133,755,200 GRMZM2G044128 pza01623 Chr8 5,160,708 5,162,795 Zm00001d008327 pza01623 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 5,397,381 5,399,132 GRMZM2G112782 pza01677 Chr10 71,063,036 71,066,861 Zm00001d024418 pza01677 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 70,186,132 70,189,912 GRMZM2G168364 pza01714 Chr7 134,168,464 134,170,246 Zm00001d020974 pza01714 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 138,260,086 138,261,759 GRMZM2G061885 pza01735 Chr2 185,341,447 185,347,936 Zm00001d005831 pza01735 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 190,284,721 190,291,227 GRMZM2G305822 pza01791 Chr9 82,022,416 82,025,519 Zm00001d046364 pza01791 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 84,217,900 84,227,494 GRMZM2G001530 pza01877 Chr10 77,686,954 77,691,931 Zm00001d024538 pza01877 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 77,078,388 77,079,341 GRMZM2G118286 pza01883 Chr10 9,383,491 9,407,372 Zm00001d023538 pza01883 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 9,347,497 9,371,362 GRMZM2G068259 pza01921 Chr1 262,219,645 262,230,412 Zm00001d033552 pza01921 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 266,967,929 266,975,303 GRMZM2G054803 pza01936 Chr7 45,400,081 45,402,022 Zm00001d019629 pza01936 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 46,898,944 46,905,237 GRMZM2G115304 pza01946 Chr7 129,376,221 129,383,767 Zm00001d020807 pza01946 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 133,502,732 133,510,166 GRMZM2G165631 pza02040 Chr5 172,133,346 172,138,422 Zm00001d016797 pza02040 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 176,180,755 176,186,882 GRMZM2G087612 pza02044 Chr1 291,937,388 291,941,593 Zm00001d034591 pza02044 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 297,382,217 297,386,554 GRMZM2G023194 pza02128 Chr10 111,795,775 111,798,782 Zm00001d025286 pza02128 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 112,660,019 112,662,739 GRMZM2G369931 pza02182 Chr3 225,852,909 225,856,380 Zm00001d044490 pza02182 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 229,584,377 229,586,793 GRMZM2G150383 pza02266 Chr2 229,529,084 229,531,382 Zm00001d007596 pza02266 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 235,925,333 235,926,658 GRMZM2G088849 pza02291 Chr7 85,907,159 85,909,631 Zm00001d020052 pza02291 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 88,709,984 88,712,122 GRMZM2G125494 pza02337 Chr2 15,582,030 15,592,514 Zm00001d002580 pza02337 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 15,969,358 15,979,838 GRMZM2G455568 pza02344 Chr9 13,777,074 13,777,439 GRMZM2G467907 pza02365 Chr7 127,179,179 127,184,226 Zm00001d020748 pza02365 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 131,101,945 131,106,713 GRMZM2G158021 pza02373 Chr7 167,373,185 167,379,694 Zm00001d022209 pza02373 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 172,900,966 172,906,885 GRMZM2G072526 pza02386 Chr7 160,271,657 160,276,364 Zm00001d021903 pza02386 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 165,716,406 165,721,222 GRMZM2G081127 pza02388 Chr8 167,824 174,330 Zm00001d008176 pza02388 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 327,598 335,271 GRMZM2G110398 pza02402 Chr3 171,486,954 171,491,966 Zm00001d042621 pza02402 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 174,100,666 174,105,367 GRMZM2G098800 pza02411 Chr4 153,223,584 153,226,721 Zm00001d051387 pza02411 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 156,767,880 156,770,006 GRMZM2G073199 pza02421 Chr4 199,962,521 199,966,536 Zm00001d052901 pza02421 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 204,071,169 204,075,125 GRMZM2G000660 pza02423 Chr3 230,830,536 230,833,871 Zm00001d044693 pza02423 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 235,061,755 235,065,086 GRMZM2G054050 pza02427 Chr3 24,354,426 24,358,548 Zm00001d040034 pza02427 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 23,839,256 23,843,414 GRMZM2G005346 pza02450 Chr2 47,788,105 47,793,199 Zm00001d003590 pza02450 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 49,123,838 49,128,914 GRMZM2G070639 pza02457 Chr4 29,197,166 29,201,100 Zm00001d049452 pza02457 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 30,714,265 30,717,256 GRMZM2G072658 pza02462 Chr5 6,866,349 6,870,062 Zm00001d013251 pza02462 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 7,132,169 7,135,357 GRMZM2G106218 pza02472 Chr6 149,672,083 149,678,650 Zm00001d038292 pza02472 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 153,563,038 153,569,387 GRMZM2G141760 pza02478 Chr6 141,098,824 141,107,819 Zm00001d038007 pza02478 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 145,000,655 145,009,587 GRMZM2G026442 pza02479 Chr4 213,260,027 213,287,363 Zm00001d053155 pza02479 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 216,733,100 216,760,207 GRMZM2G013981 pza02480 Chr5 215,883,771 215,886,889 Zm00001d018489 pza02480 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 221,702,963 221,706,664 GRMZM2G119104 pza02487 Chr1 22,583,820 22,595,788 GRMZM2G114444 pza02514 Chr3 218,561,885 218,567,450 Zm00001d044216 pza02514 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 222,090,042 222,095,901 GRMZM2G325762 pza02549 Chr2 107,818,821 107,820,874 GRMZM2G152007 pza02554 Chr10 2,454,333 2,457,858 Zm00001d023279 pza02554 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 2,032,914 2,036,564 GRMZM2G073750 pza02619 Chr3 123,881,899 123,888,098 Zm00001d041497 pza02619 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 124,224,716 124,231,074 GRMZM2G116434 pza02676 Chr5 60,798,603 60,803,937 Zm00001d014771 pza02676 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 62,609,231 62,613,757 GRMZM2G372180 pza02727 Chr2 231,598,423 231,605,113 Zm00001d007712 pza02727 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 237,946,938 237,954,326 GRMZM2G410479 pza02791 Chr1 67,529,480 67,539,492 Zm00001d029375 pza02791 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 68,088,360 68,098,674 GRMZM2G102845 pza02818 Chr5 78,415,886 78,423,936 Zm00001d015243 pza02818 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 80,676,960 80,685,239 GRMZM2G465169 pza02861 Chr9 43,841,651 43,847,738 Zm00001d045864 pza02861 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 44,506,873 44,511,952 GRMZM2G163769 pza02939 Chr2 160,620,927 160,623,348 Zm00001d005228 pza02939 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 164,595,462 164,597,890 GRMZM2G106590 pza02941 Chr10 71,371,828 71,375,270 Zm00001d024425 pza02941 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 70,492,332 70,495,711 GRMZM2G137930 pza02948 Chr6 35,680,636 35,684,873 GRMZM2G068028 pza02957 Chr1 282,860,846 282,864,657 Zm00001d034251 pza02957 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 287,921,614 287,925,375 GRMZM2G181251 pza02961 Chr10 16,210,496 16,218,008 Zm00001d023706 pza02961 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 16,400,383 16,407,915 GRMZM2G100716 pza02992 Chr4 150,491,358 150,496,840 Zm00001d051320 pza02992 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 153,916,343 153,921,722 GRMZM2G099186 pza03047 Chr6 31,411,941 31,415,710 Zm00001d035551 pza03047 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 32,902,155 32,905,929 GRMZM2G058252 pza03049 Chr5 89,351,903 89,357,717 Zm00001d015460 pza03049 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 91,587,913 91,590,987 GRMZM2G018619 pza03057 Chr9 77,764,194 77,768,544 Zm00001d046313 pza03057 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 79,854,295 79,858,733 GRMZM2G037140 pza03063 Chr6 35,896,141 35,897,813 Zm00001d035629 pza03063 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 37,509,032 37,510,146 GRMZM2G126361 pza03069 Chr6 83,126,966 83,131,041 Zm00001d036371 pza03069 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 86,007,940 86,011,821 GRMZM2G003883 pza03070 Chr3 44,224,072 44,229,612 GRMZM2G080917 pza03073 Chr3 170,149,613 170,154,226 Zm00001d042582 pza03073 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 172,730,778 172,735,201 GRMZM2G106424 pza03081 Chr4 209,972,408 209,975,654 Zm00001d053090 pza03081 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 213,265,064 213,268,433 GRMZM2G130927 pza03092 Chr5 12,044,175 12,049,812 Zm00001d013477 pza03092 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 12,477,179 12,482,863 GRMZM2G102790 pza03120 Chr6 57,696,052 57,697,795 Zm00001d035918 pza03120 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 60,271,741 60,272,826 GRMZM2G048295 pza03121 Chr2 30,170,679 30,172,939 Zm00001d003064 pza03121 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 30,987,718 30,989,878 GRMZM2G143328 pza03146 Chr3 215,930,994 215,932,039 Zm00001d044107 pza03146 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 219,453,611 219,454,543 GRMZM2G111045 pza03152 Chr4 147,942,670 147,945,039 Zm00001d051269 pza03152 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 151,309,707 151,312,076 GRMZM2G088783 pza03154 Chr3 204,223,730 204,225,741 Zm00001d043687 pza03154 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 207,411,767 207,413,717 GRMZM2G159547 pza03167 Chr5 208,398,128 208,399,748 Zm00001d018097 pza03167 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 214,127,646 214,129,053 GRMZM2G070849 pza03168 Chr1 51,395,397 51,397,668 Zm00001d028930 pza03168 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 51,839,504 51,841,800 GRMZM2G096358 pza03178 Chr8 11,486,302 11,488,135 Zm00001d008528 pza03178 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 11,883,571 11,885,380 GRMZM2G003406 pza03182 Chr8 153,001,174 153,002,887 Zm00001d011669 pza03182 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 158,166,587 158,167,961 GRMZM2G139688 pza03191 Chr3 187,060,539 187,064,561 Zm00001d043131 pza03191 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 189,941,282 189,945,237 GRMZM2G131937 pza03193 Chr1 212,948,280 212,949,607 Zm00001d032179 pza03193 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 215,957,280 215,958,780 GRMZM2G173633 pza03196 Chr10 124,346,736 124,348,421 Zm00001d025664 pza03196 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 125,369,798 125,371,471 GRMZM2G111117 pza03203 Chr4 82,918,804 82,920,269 Zm00001d050400 pza03203 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 85,967,006 85,968,538 GRMZM2G070523 pza03226 Chr5 20,219,035 20,221,972 Zm00001d013801 pza03226 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 20,673,284 20,676,096 GRMZM2G048136 pza03227 Chr4 1,269,236 1,270,429 Zm00001d048623 pza03227 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 1,532,822 1,534,194 GRMZM2G053720 pza03240 Chr1 88,349,118 88,351,781 Zm00001d029853 pza03240 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 90,315,517 90,318,180 GRMZM2G107867 pza03243 Chr1 44,371,887 44,378,439 Zm00001d028733 pza03243 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 44,554,395 44,560,803 GRMZM2G365423 pza03254 Chr4 65,845,329 65,852,416 Zm00001d050134 pza03254 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 68,237,414 68,255,070 GRMZM2G070523 pza03274 Chr5 20,219,035 20,221,972 GRMZM2G176175 pza03344 Chr7 22,015,365 22,026,546 GRMZM2G372398 pza03344 Chr1 36,501,767 36,518,959 Zm00001d019230 pza03344 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 23,054,461 23,065,589 Zm00001d028490 pza03344 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 36,826,368 36,843,555 GRMZM2G028037 pza03391 Chr3 221,519,554 221,524,903 Zm00001d044324 pza03391 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 225,197,973 225,203,272 GRMZM2G020409 pza03409 Chr4 129,844,141 129,848,910 Zm00001d050943 pza03409 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 132,886,764 132,891,622 GRMZM2G407044 pza03459 Chr4 135,184,888 135,190,339 Zm00001d051043 pza03459 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 138,316,944 138,322,251 GRMZM2G465169 pza03469 Chr9 43,841,651 43,847,738 GRMZM2G472703 pza03491 Chr10 36,254,235 36,258,217 Zm00001d024022 pza03491 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 37,311,469 37,313,771 GRMZM2G077197 pza03527 Chr3 5,983,469 5,988,309 Zm00001d039469 pza03527 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 5,145,889 5,150,710 GRMZM2G112165 pza03529 Chr2 190,093,038 190,097,209 Zm00001d006008 pza03529 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 195,179,025 195,182,945 GRMZM2G024668 pza03531 Chr1 184,272,689 184,277,348 Zm00001d031332 pza03531 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 186,376,331 186,380,883 GRMZM2G156105 pza03536 Chr4 108,960,369 108,961,386 Zm00001d050655 pza03536 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 112,405,476 112,406,505 GRMZM2G065599 pza03612 Chr8 129,490,869 129,493,053 Zm00001d010928 pza03612 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 133,839,411 133,861,487 GRMZM2G077361 pza03723 Chr7 45,162,309 45,167,457 Zm00001d019627 pza03723 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 46,612,501 46,650,526 GRMZM2G048170 pza03728 Chr7 142,818,487 142,819,699 GRMZM2G084465 pza03733 Chr3 182,334,242 182,336,143 Zm00001d042966 pza03733 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 185,204,150 185,206,008 GRMZM2G084465 pza03735 Chr3 182,334,242 182,336,143 GRMZM2G107867 pza03742 Chr1 44,371,887 44,378,439 GRMZM2G164400 pza03747 Chr2 7,519,489 7,528,034 Zm00001d002184 pza03747 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 7,537,954 7,546,246 GRMZM2G024973 pzb00079 Chr5 11,793,473 11,795,945 Zm00001d013465 pzb00079 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 12,228,329 12,230,206 GRMZM2G104262 pzb00093 Chr4 124,002,463 124,006,407 Zm00001d050850 pzb00093 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 126,958,963 126,962,865 GRMZM2G102161 pzb00221 Chr9 146,936,987 146,945,281 Zm00001d048082 pzb00221 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 149,613,002 149,621,302 GRMZM2G145041 pzb00232 Chr5 64,145,458 64,148,638 Zm00001d014863 pzb00232 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 66,024,695 66,027,984 GRMZM2G143955 pzb00752 Chr7 136,898,993 136,902,620 Zm00001d021046 pzb00752 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 141,160,173 141,163,742 GRMZM2G022558 pzb00761 Chr9 87,869,349 87,871,737 Zm00001d046444 pzb00761 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 90,216,733 90,219,166 GRMZM2G126988 pzb00869 Chr5 33,070,313 33,085,769 Zm00001d014150 pzb00869 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 34,229,299 34,244,983 GRMZM2G080054 pzb00901 Chr2 9,449,250 9,451,125 Zm00001d002288 pzb00901 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 9,618,257 9,621,258 GRMZM2G090905 pzb00942 Chr6 144,755,799 144,758,179 GRMZM2G365961 pzb01009 Chr6 85,959,826 85,961,557 Zm00001d036439 pzb01009 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 88,560,354 88,561,488 GRMZM2G002652 pzb01021 Chr4 210,865,185 210,868,144 Zm00001d053107 pzb01021 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 214,129,873 214,132,827 GRMZM2G171707 pzb01103 Chr2 203,572,465 203,578,306 Zm00001d006476 pzb01103 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 209,512,508 209,518,574 GRMZM2G082855 pzb01110 Chr9 24,074,354 24,081,173 Zm00001d045481 pzb01110 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 23,988,206 23,995,123 GRMZM2G016939 pzb01111 Chr10 134,434,838 134,438,537 Zm00001d025997 pzb01111 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 135,684,027 135,687,837 GRMZM2G020366 pzb01112 Chr5 69,147,384 69,150,733 Zm00001d014986 pzb01112 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 71,085,221 71,092,386 GRMZM2G474685 pzb01227 Chr1 289,615,706 289,619,063 Zm00001d034507 pzb01227 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 294,961,663 294,963,739 GRMZM2G047448 pzb01233 Chr2 3,392,385 3,393,860 Zm00001d001948 pzb01233 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 3,416,796 3,418,004 GRMZM2G046284 pzb01301 Chr10 10,198,909 10,200,857 Zm00001d023559 pzb01301 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 10,215,795 10,217,698 GRMZM2G090905 pzb01308 Chr6 144,755,799 144,758,179 GRMZM2G313162 pzb01358 Chr9 111,007,594 111,013,702 Zm00001d046979 pzb01358 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 113,964,897 113,976,963 GRMZM2G107629 pzb01647 Chr1 231,759,993 231,766,222 Zm00001d032703 pzb01647 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 235,316,064 235,322,119 GRMZM2G102347 pzb01662 Chr1 34,409,866 34,413,485 Zm00001d028429 pzb01662 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 34,709,436 34,713,166 GRMZM2G079823 pzb01957 Chr1 26,198,119 26,204,511 Zm00001d028208 pzb01957 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 26,428,405 26,434,744 GRMZM2G058745 pzb02155 Chr8 124,182,497 124,187,982 Zm00001d010796 pzb02155 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 128,039,610 128,045,077 GRMZM2G471529 pzb02179 Chr3 158,932,008 158,938,325 Zm00001d042312 pzb02179 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 160,473,898 160,480,245 GRMZM2G087233 qm1 Classical Gene Chr5 19,458,986 19,461,229 Zm00001d013777 qm1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 19,923,773 19,930,072 GRMZM2G113216 qsox1 Chr6 163,118,403 163,123,994 Zm00001d038927 qsox1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 167,149,767 167,155,236 GRMZM5G822829 r1 Classical Gene Chr10 138,489,998 138,498,818 Zm00001d026147 r1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 139,780,968 139,790,276 GRMZM2G003927 ra1 Classical Gene Chr7 110,359,182 110,359,930 Zm00001d020430 ra1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 113,572,410 113,572,937 AC233943.1_FG002 ra2 Classical Gene Chr3 12,890,068 12,890,853 AC233943.1_FG002 ra2 less than 1/3 of gene based on alignment with cDNA BT035538 GI:194692917 and genomic sequence DQ327701.1 (Jul 2011) Chr3 12,890,068 12,890,853 Zm00001d039694 ra2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 12,158,280 12,159,065 GRMZM2G014729 ra3 Classical Gene Chr7 166,895,789 166,900,274 Zm00001d022193 ra3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 172,484,959 172,489,194 GRMZM2G165901 rab15 Classical Gene Chr5 14,084,193 14,085,595 Zm00001d013568 rab15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 14,451,040 14,451,980 GRMZM2G091535 rab28 chr 5 hit Chr5 5,622,016 5,622,902 GRMZM2G472236 rab30 Chr1 12,246,354 12,247,358 GRMZM2G038032 rack1 receptor for activated C kinase; from: Wang B et al 2014 Chr6 163,078,693 163,081,080 Zm00001d038923 rack1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 167,106,090 167,108,422 GRMZM2G040477 rack2 receptor for activated C kinase; chr 8 paralog; from: Wang B et al 2014 Chr8 65,264,847 65,267,084 Zm00001d009480 rack2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 66,824,808 66,826,892 Zm00001d053917 rad1 Chr4 243,631,001 243,639,724 GRMZM2G121543 rad51a Zhang et al., 2014 Chr7 160,178,520 160,182,662 Zm00001d021898 rad51a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 165,620,035 165,624,084 GRMZM2G084762 rad51b Zhang et al., 2014 Chr3 135,467,784 135,471,240 Zm00001d041757 rad51b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 136,133,287 136,136,626 GRMZM2G123089 rad51c Zhang et al, 2014 Chr3 220,254,011 220,258,502 Zm00001d044278 rad51c Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 223,869,824 223,874,157 GRMZM2G055464 rad51d Zhang et al, 2014 Chr7 170,060,949 170,067,054 Zm00001d022332 rad51d Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 175,618,085 175,622,494 AC219006.2_FG007 rad51e Zhang et al, 2014 Chr8 131,503,426 131,513,533 Zm00001d010986 rad51e Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 135,932,034 135,940,852 GRMZM2G457621 raf1 Feiz et al., 2012 Chr2 1,361,783 1,363,354 Zm00001d001812 raf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 1,341,011 1,342,402 GRMZM2G139123 raf2 Feiz et al., 2014 Chr1 295,100,635 295,101,482 Zm00001d034715 raf2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 300,526,733 300,527,389 GRMZM2G700665 rap2 Chr8 131,576,889 131,580,316 Zm00001d010987 rap2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 136,009,216 136,012,084 GRMZM2G048067 raptor1 Chr10 1,411,349 1,423,184 Zm00001d023230 raptor1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 954,679 966,602 GRMZM2G330430 ras1 from Cell Genomics Project Chr2 40,054,092 40,056,877 Zm00001d003347 ras1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 41,022,707 41,025,532 GRMZM2G144008 ras11B2 Chr5 2,259,767 2,263,658 Zm00001d012954 ras11B2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 2,343,012 2,343,815 GRMZM2G164527 ras11E1 Chr1 19,633,990 19,636,466 Zm00001d028002 ras11E1 Chr1 19,961,083 19,963,559 GRMZM2G019119 ras11E2 Chr2 172,384,492 172,387,622 Zm00001d005504 ras11E2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 176,567,431 176,570,578 AC197246.3_FG001 ras11G1 Chr1 192,134,798 192,137,078 Zm00001d031562 ras11G1 Chr1 194,370,600 194,371,395 GRMZM2G176677 ras18A1 from: BT087588; nactf120 locus assigned by the Grassius project, (Yilmaz et al 2009) Chr2 27,056,209 27,064,181 Zm00001d002945 ras18A1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 27,817,387 27,825,275 GRMZM2G173878 ras2 Chr10 124,319,406 124,322,173 Zm00001d025660 ras2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 125,342,471 125,344,978 GRMZM2G149847 ras8B1 Chr2 233,015,891 233,019,721 Zm00001d007763 ras8B1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 239,247,946 239,251,806 GRMZM2G316113 rbap1 chr 8 gene model better sequence match (M Schaeffer Dec 2012) Chr8 153,994,750 154,008,418 GRMZM2G316113 rbap1 Classical Gene Chr8 153,994,750 154,008,418 Zm00001d011704 rbap1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 159,242,817 159,245,870 GRMZM2G137965 rbap2 best match to nfc101 sequence AY10048 Chr3 204,143,323 204,150,370 Zm00001d043682 rbap2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 207,218,328 207,225,184 GRMZM2G093815 rbd1 Chr7 11,492,262 11,493,481 GRMZM2G426953 rboh1 from DQ855284 Chr3 182,095,773 182,101,296 Zm00001d042961 rboh1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 184,964,596 184,969,233 GRMZM2G138152 rboh2 covers a gap in B73_v2 assembly Chr3 200,364,162 200,384,941 Zm00001d043543 rboh2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 203,425,340 203,444,747 GRMZM2G043435 rboh3 covers a gap in B73_v2 Chr6 160,040,811 160,052,133 Zm00001d038762 rboh3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 164,016,293 164,027,578 GRMZM2G441541 rboh4 from EF364442 Chr4 191,928,760 191,933,957 Zm00001d052653 rboh4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 196,008,355 196,012,956 GRMZM2G162200 rca1 from: W21622 Chr4 693,736 696,087 GRMZM2G162200 rca2 from: AF305876 Chr4 693,736 696,087 Zm00001d048593 rca2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 921,608 923,738 GRMZM2G162282 rca3 from: JX863889 Chr4 691,410 693,139 Zm00001d048592 rca3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 919,276 920,997 GRMZM2G302245 rcc1 Zheng et al., 2016 Chr3 179,842,136 179,848,015 GRMZM2G003565 rcc2 Zheng et al., 2016 Chr2 49,685,916 49,690,865 GRMZM2G135770 rcc3 Zheng et al., 2016 Chr4 81,813,738 81,819,034 GRMZM2G074850 rcp1 from BT056139 Chr6 68,972,623 68,974,546 Zm00001d036091 rcp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 71,737,372 71,738,505 GRMZM2G097316 rcph1 from: AB021175 Chr3 145,514,689 145,516,008 Zm00001d041984 rcph1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 146,589,411 146,590,838 GRMZM2G146502 rcph2 from: AB021176 Chr4 188,242,843 188,244,300 Zm00001d052527 rcph2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 192,219,140 192,220,628 GRMZM2G082437 rdr6 Petsch et al., 2015 Chr3 102,502,867 102,504,039 GRMZM2G145201 rdr6 Petsch et al., 2015 Chr3 102,532,883 102,536,036 Zm00001d040988 rdr6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 88,431,308 88,434,145 GRMZM2G092001 reas1 Qi et al., 2015 Chr6 154,250,528 154,251,027 Zm00001d038475 reas1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 158,240,771 158,284,439 GRMZM2G042992 rel2 Classical Gene Chr10 76,650,034 76,659,099 Zm00001d024523 rel2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 75,993,828 76,002,912 GRMZM2G107774 rem6.3 Jamann et al., 2016 Chr1 25,392,624 25,395,149 Zm00001d028185 rem6.3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 25,738,664 25,741,208 GRMZM2G058675 rf2 Classical Gene Chr9 34,129,753 34,143,728 Zm00001d045706 rf2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 34,496,670 34,509,714 GRMZM2G086934 rfa1 Chr9 147,128,364 147,131,996 Zm00001d048086 rfa1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 149,842,814 149,846,476 Zm00001d037540 rfz1 Chr6 128,726,080 128,728,807 GRMZM2G020187 rgd1 Classical Gene Chr6 17,165,517 17,171,948 Zm00001d035256 rgd1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 17,759,389 17,765,846 GRMZM5G852170 rgd2 v2, v3 Chr1 75,635,868 75,636,020 GRMZM5G892991 rgd2 v2; from GQ918490 (Schnable & Lyons, 2011); was GRMZM2G365589 in v1; Douglas et al. 2010 Chr1 75,636,094 75,640,439 Zm00001d029573 rgd2 Chr1 77,065,338 77,070,098 GRMZM2G128228 rgh3 B73_v2 fragments gene into GRMZM2G128228 and GRMZM5G849788 (from Mark Settle, 4/2013) Chr5 173,740,449 173,741,941 GRMZM5G849788 rgh3 B73_v2 fragments gene into GRMZM5G849788 and GRMZM2G128228 (from Mark Settles, 4/2013) Chr5 173,803,063 173,806,170 Zm00001d016836 rgh3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 177,823,355 177,829,656 GRMZM2G093186 rgp2 Chr8 90,299,372 90,301,852 GRMZM2G415491 rh3 From Askura et al 2012 Chr5 1,933,220 1,947,556 Zm00001d012922 rh3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 1,978,763 1,993,142 AC198418.3_FG005 rh4 B73_v2 gene model corresponds to B73_v1 GRMZM2G163072 (maizesequence.org); was GRMZM2G163072 in B73_v1, not in B73_v2; from Asakura et al 2012 Chr1 295,187,054 295,270,267 Zm00001d034721 rh4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 300,730,265 300,737,926 GRMZM2G024690 rhcp1 Li et al., 2017 Chr5 11,830,175 11,839,047 GRMZM2G131254 rhn1 Chr1 179,371,866 179,374,965 Zm00001d031179 rhn1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 181,314,460 181,317,451 GRMZM2G106960 ric1 Chr8 136,938,104 136,941,568 GRMZM2G049155 rif1 Chr7 74,139,858 74,148,720 Zm00001d019922 rif1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 76,564,755 76,573,638 GRMZM2G063536 rip1 Chr8 108,689,439 108,690,609 GRMZM2G119705 rip2 Chr7 162,849,640 162,851,038 Zm00001d022032 rip2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 168,319,347 168,320,506 GRMZM2G162748 ris1 from: Entrez Gene 100273354 Chr5 142,748,781 142,750,441 Zm00001d016134 ris1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 146,042,173 146,043,738 GRMZM2G038365 ris2 from: W49887 (chr 4 hit) Chr4 226,804,999 226,807,042 Zm00001d053432 ris2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 231,193,933 231,195,575 GRMZM2G109987 rld1 Classical Gene Chr9 154,912,262 154,920,527 Zm00001d048527 rld1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 157,815,873 157,824,341 GRMZM2G042250 rld2 from: DQ286526 Chr1 2,791,599 2,798,512 Zm00001d027317 rld2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 2,818,955 2,826,611 GRMZM2G099324 rlk1 Yang et al., 2017 Chr9 16,329,195 16,331,954 GRMZM2G087628 rlsb1 Bowman et al., 2013 Chr3 221,649,770 221,652,972 Zm00001d044328 rlsb1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 225,330,767 225,334,170 GRMZM2G546254 rlsb2 From sequence in Yerramsetty et al., 2016 Chr6 161,543,914 161,548,356 GRMZM2G154946 rmr1 Classical Gene Chr6 144,471,007 144,478,241 Zm00001d038113 rmr1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 148,382,390 148,390,037 GRMZM2G009208 rmr2 from Barbour et al., 2012 Chr2 22,729,494 22,732,649 Zm00001d002812 rmr2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 23,397,758 23,400,810 GRMZM2G007681 rmr6 from GenBank FJ426107 Chr1 188,753,176 188,845,235 Zm00001d031459 rmr6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 190,964,811 190,978,369 GRMZM2G035820 rnc1 Classical Gene Chr3 187,230,808 187,235,487 GRMZM2G035820 rnc1 from alignment with cDNA EF650835|gi|149980666 to B73_v2 (Jul 2011) Chr3 187,230,808 187,235,487 Zm00001d043146 rnc1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 190,108,063 190,112,698 GRMZM2G158835 rnp1 Chr7 167,862,249 167,864,329 Zm00001d022237 rnp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 173,379,234 173,381,283 GRMZM2G100639 roa1 Chr6 153,935,909 153,940,922 GRMZM2G415327 rop1 Entrez Gene 541773 Chr5 206,201,286 206,210,007 Zm00001d018004 rop1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 211,768,723 211,777,331 GRMZM5G846811 rop2 Classical Gene Chr4 238,592,881 238,596,701 GRMZM5G846811 rop2 from alignment on B73_v2 by mRNA seqence AF126053.2 Chr4 238,592,881 238,596,701 Zm00001d053899 rop2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 243,343,911 243,347,704 GRMZM2G100505 rop3 Chr6 133,009,256 133,012,520 Zm00001d037911 rop3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 141,752,465 141,755,756 GRMZM2G375002 rop4 Chr5 217,656,047 217,664,941 Zm00001d018573 rop4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 223,568,967 223,577,082 GRMZM2G102946 rop5 Chr9 3,063,132 3,080,500 Zm00001d044802 rop5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 2,773,748 2,789,581 GRMZM2G176217 rop6 from Entrez Gene 542017 Chr6 158,645,247 158,647,592 Zm00001d038688 rop6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 162,602,604 162,605,160 AC209819.3_FG012 rop7 Chr8 122,478,251 122,480,444 Zm00001d010732 rop7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 126,282,952 126,285,155 GRMZM2G001953 rop8 from: AF376054 Chr4 182,363,663 182,367,487 Zm00001d052273 rop8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 185,525,524 185,529,258 GRMZM5G803949 rop9 AY163377, mRNA alignment to B73_v2 (Nov 2011) Chr5 70,912,027 70,915,976 Zm00001d015036 rop9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 72,869,353 72,873,307 AC152495.1_FG002 rp1 Classical Gene Chr10 3,283,523 3,287,419 Zm00001d023317 rp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 2,861,471 2,865,816 AC230011.2_FG002 rp3 From homology to genbank accession AF489541 Chr3 113,913,960 113,920,267 Zm00001d041362 rp3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 114,244,392 114,251,164 GRMZM2G172883 rpd3 from: AF035815 Chr4 231,335,846 231,342,828 Zm00001d053595 rpd3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 235,825,666 235,832,657 GRMZM2G026807 rpe1 Chr1 14,623,612 14,638,761 Zm00001d027841 rpe1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 14,831,571 14,846,630 GRMZM2G345039 rph1 from: Entrez gene 100192964 Chr8 67,242,630 67,250,938 Zm00001d009522 rph1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 68,814,240 68,819,306 GRMZM2G467086 rpl10 Chr3 229,627,953 229,630,162 Zm00001d044615 rpl10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 233,458,261 233,460,440 GRMZM2G180724 rpl15b Chr7 149,310,459 149,313,123 Zm00001d021508 rpl15b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 154,481,841 154,484,342 GRMZM2G119169 rpl17a Entrez Gene Chr8 92,685,793 92,690,815 Zm00001d010009 rpl17a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 94,987,331 94,992,881 GRMZM2G702426 rpl17b Entrez Gene & Classical Gene & BT060719 Chr4 44,088,617 44,091,066 Zm00001d049815 rpl17b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 45,901,761 45,904,117 GRMZM2G148744 rpl17c Chr1 193,824,436 193,827,413 Zm00001d031611 rpl17c Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 196,150,569 196,153,475 GRMZM2G171444 rpl19 Chr5 190,804,914 190,807,760 Zm00001d017449 rpl19 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 196,103,545 196,106,389 GRMZM2G028216 rpl29 Chr4 180,610,547 180,612,241 Zm00001d052216 rpl29 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 183,515,085 183,516,581 GRMZM2G027728 rpl30 Chr8 2,349,748 2,352,938 Zm00001d008245 rpl30 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 2,490,496 2,493,628 GRMZM2G145758 rpl32 Chr2 44,796,341 44,798,676 Zm00001d003493 rpl32 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 46,024,387 46,026,629 GRMZM2G043279 rpl35 Chr5 163,150,789 163,153,241 GRMZM2G100467 rpl39 Chr5 213,868,446 213,869,401 Zm00001d018383 rpl39 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 219,689,034 219,689,884 GRMZM2G157007 rpl40 Chr8 1,830,837 1,832,237 GRMZM2G009412 rpl44 Chr7 153,856,520 153,858,758 GRMZM5G815894 rpl5a Chr3 168,275,428 168,278,435 Zm00001d042525 rpl5a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 170,807,231 170,810,349 GRMZM2G163081 rpl5b Chr8 163,737,203 163,740,608 Zm00001d012161 rpl5b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 169,183,712 169,186,572 GRMZM2G174919 rpl7 from: EU951421 Chr2 135,231,574 135,241,133 Zm00001d004779 rpl7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 138,647,642 138,657,256 GRMZM2G018080 rplp1 Missannotation: A putative gene missannotation (split gene) has been identified for this gene model using Compara homology predictions. Chr1 11,692,597 11,694,219 GRMZM2G315806 rplp1 Missannotation: A putative gene missannotation (split gene) has been identified for this gene model using Compara homology predictions. Chr1 11,687,866 11,691,260 Zm00001d027714 rplp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 11,881,252 11,887,552 GRMZM2G115564 rpo2 from: AF127022 Chr9 105,489,333 105,500,736 Zm00001d046835 rpo2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 107,924,548 107,935,828 GRMZM2G381395 rpot1 Classical Gene Chr7 166,160,578 166,175,495 Zm00001d022169 rpot1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 171,696,582 171,711,112 GRMZM5G895282 rps1 from: CX129574 Chr7 16,680,018 16,682,350 GRMZM2G095511 rps10 Chr1 274,598,475 274,600,271 Zm00001d033951 rps10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 279,386,535 279,388,331 GRMZM2G019325 rps11 Classical Gene Chr10 141,493,143 141,495,837 Zm00001d026286 rps11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 142,863,674 142,866,331 GRMZM2G063340 rps12 from: EU962633 Chr7 21,287,558 21,290,256 Zm00001d019219 rps12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 22,317,838 22,320,320 GRMZM2G158034 rps13 from: X62455 Chr4 37,626,157 37,628,934 Zm00001d049666 rps13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 39,268,830 39,270,978 GRMZM5G869564 rps15 Chr5 15,617,795 15,619,235 Zm00001d013648 rps15 Chr5 16,157,006 16,159,967 GRMZM2G093574 rps21a from BT062080 Chr6 137,097,719 137,100,951 Zm00001d037886 rps21a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 141,049,435 141,052,489 GRMZM2G067303 rps22a Chr9 142,752,102 142,755,422 Zm00001d045448 rps22a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 22,516,151 22,518,341 GRMZM2G091383 rps24 from: EU953725 Chr5 151,669,661 151,671,447 Zm00001d016276 rps24 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 155,336,754 155,338,487 GRMZM2G084868 rps25 from: EU957298 Chr4 51,745,820 51,747,254 Zm00001d049933 rps25 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 53,889,726 53,891,170 GRMZM2G066222 rps27 Chr4 218,054,500 218,057,037 Zm00001d053239 rps27 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 221,656,653 221,658,921 GRMZM2G377600 rps27b from: AY106437 Chr5 160,795,273 160,797,497 Zm00001d016491 rps27b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 164,555,551 164,557,626 GRMZM2G132121 rps27c from: DQ245897 Chr5 7,529,197 7,531,742 Zm00001d013282 rps27c Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 7,809,349 7,811,556 GRMZM2G099352 rps3 Chr10 75,709,393 75,711,864 Zm00001d024511 rps3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 74,955,857 74,958,288 GRMZM2G125271 rps4 from: AF013487 Chr5 1,489,127 1,491,854 Zm00001d012878 rps4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 1,531,936 1,534,668 GRMZM2G156673 rps5 from: AY103625 Chr8 6,591,423 6,593,377 Zm00001d008387 rps5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 6,915,036 6,916,870 GRMZM2G054136 rps6 Chr7 166,416,769 166,429,948 Zm00001d022180 rps6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 171,990,566 172,003,904 GRMZM2G336875 rps8 from: M95064 Chr4 232,843,893 232,846,622 Zm00001d053630 rps8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 237,401,529 237,403,959 GRMZM5G845244 rps8 (cp) Wei & Han. 2016 ChrPt 78,488 78,898 GRMZM2G003043 rrb1 Classical Gene Chr2 224,644,895 224,652,148 Zm00001d007407 rrb1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 231,036,635 231,047,416 GRMZM2G153150 rrb2 Chr4 192,376,709 192,383,877 Zm00001d052666 rrb2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 196,473,381 196,480,603 GRMZM2G033828 rrb3 from: EU945294 Chr1 196,158,449 196,165,691 Zm00001d031678 rrb3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 198,531,549 198,538,490 GRMZM5G868908 rrph1 from NM_001159033.1 in Wang et al 2014 Chr5 169,710,822 169,727,140 Zm00001d016716 rrph1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 173,615,731 173,631,454 GRMZM2G028041 rs1 assigned by the Grassius project, (Yilmaz et al 2009) to hb132 Chr7 3,667,975 3,674,168 GRMZM2G028041 rs1 Classical Gene Chr7 3,667,975 3,674,168 Zm00001d018742 rs1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 3,845,026 3,851,209 GRMZM2G403620 rs2 Classical Gene Chr1 154,968,134 154,972,600 Zm00001d030737 rs2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 156,875,930 156,877,042 AC149818.2_FG009 rtcl1 based on sequence homology to rtcs1 Chr9 152,747,407 152,748,234 Zm00001d048401 rtcl1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 155,625,722 155,626,844 GRMZM2G092542 rtcs1 Classical Gene Chr1 10,824,798 10,826,042 GRMZM2G092542 rtcs1 from Muthreich et al 2013 Chr1 10,824,798 10,826,042 Zm00001d027679 rtcs1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 10,992,938 10,994,177 GRMZM2G166159 rte1 Chatterjee et al., 2014 Chr1 149,321,818 149,326,540 Zm00001d030656 rte1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 151,221,229 151,225,821 GRMZM2G082203 rte2 Chr3 128,114,749 128,119,422 GRMZM2G051753 rte3 Chr3 10,940,297 10,946,516 GRMZM2G374989 rte4 Chr9 153,707,451 153,713,896 GRMZM2G302559 rte5 Chr3 183,092,037 183,096,804 GRMZM2G454327 rte6 Chr8 79,458,103 79,458,955 GRMZM2G099056 rth1 Classical Gene Chr1 253,953,554 253,966,804 Zm00001d033303 rth1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 258,164,182 258,177,505 GRMZM2G377215 rth3 Classical Gene Chr1 47,509,017 47,511,525 Zm00001d028826 rth3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 47,787,874 47,789,877 GRMZM2G436299 rth6 Chr1 104,617,335 104,621,459 GRMZM5G832994 rtl1 from: NM_001151994 Chr8 154,129,622 154,132,963 GRMZM2G077293 rtl2 from: BT036282 Chr3 203,830,116 203,833,100 Zm00001d043675 rtl2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 206,997,386 207,000,397 GRMZM2G121208 rtl3 from: ACN37097 Chr6 161,903,231 161,906,492 GRMZM2G039592 rtl4 from: NM_001150599 Chr1 288,924,643 288,926,264 Zm00001d034485 rtl4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 294,247,552 294,249,062 GRMZM2G017557 rtp1 Classical Gene Chr4 11,930,712 11,932,207 Zm00001d049020 rtp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 12,826,628 12,828,071 GRMZM2G163848 rul1 Chr8 150,095,586 150,100,818 Zm00001d011588 rul1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 155,128,553 155,133,508 GRMZM2G037368 rum1 From von Behrens et al 2011; iaa13 locus assigned by the Grassius project, (Yilmaz et al 2009) Chr3 209,176,237 209,179,599 Zm00001d043878 rum1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 212,687,925 212,691,045 GRMZM2G019919 rws1 from: AF533364 Chr2 21,882,159 21,886,917 Zm00001d002781 rws1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 22,563,741 22,576,668 GRMZM2G334584 rxo1 Chr6 8,100,151 8,105,044 GRMZM2G152526 rz323a Chr1 143,634,168 143,638,506 Zm00001d030579 rz323a Chr1 145,820,512 145,824,791 GRMZM2G134980 rz474a(dnaj) Chr5 16,340,013 16,344,789 GRMZM2G113295 rzfl1 Chr9 147,635,621 147,639,545 Zm00001d048112 rzfl1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 150,377,793 150,378,578 GRMZM2G056929 s1fa1 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 59,385,197 59,387,466 Zm00001d003822 s1fa1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 60,917,100 60,919,425 GRMZM5G852502 sacd1 From aa sequence in Du et al., 2016 Chr3 160,709,513 160,714,196 Zm00001d042344 sacd1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 162,243,684 162,248,792 GRMZM2G119305 sacd10 Han et al., 2016 Chr10 61,689,660 61,692,217 AC215690.3_FG002 sacd11 Chr10 106,806,918 106,810,315 Zm00001d025170 sacd11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 107,470,951 107,474,926 GRMZM2G180399 sacd2 from DQ192663 (sequence from Du et al., 2016) Chr8 161,386,924 161,390,467 Zm00001d012033 sacd2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 166,838,901 166,842,661 GRMZM2G143625 sacd3 Chr1 107,371,746 107,373,355 Zm00001d030165 sacd3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 109,910,640 109,911,650 GRMZM2G003368 sacd4 Han et al., 2016 Chr1 120,854,790 120,856,675 GRMZM2G026793 sacd5 Han et al., 2016 Chr2 74,671,225 74,675,172 GRMZM2G027673 sacd6 Han et al., 2016 Chr4 102,114,754 102,116,797 GRMZM2G073540 sacd7 Han et al., 2016 Chr5 48,865,287 48,866,779 GRMZM5G883417 sacd8 Han et al., 2016 Chr7 136,213,370 136,214,936 GRMZM2G316362 sacd9 Han et al., 2016 Chr8 164,731,500 164,733,879 Zm00001d012221 sacd9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 170,366,926 170,368,457 GRMZM2G014376 sad1 from: Entrez Gene 100191894 Chr10 25,983,459 25,988,271 Zm00001d023892 sad1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 26,542,390 26,547,193 GRMZM2G042639 saf1 Chr1 43,124,855 43,126,948 Zm00001d028693 saf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 43,343,008 43,345,059 GRMZM2G117935 sal1 Classical Gene Chr9 95,580,781 95,583,611 Zm00001d046599 sal1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 98,003,371 98,003,985 GRMZM2G125635 sam1 Chr10 128,008,870 128,011,887 GRMZM2G154397 sam2 Classical Gene Chr2 33,120,217 33,123,687 Zm00001d003157 sam2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 33,981,493 33,984,783 GRMZM2G038356 sar1 Classical Gene Chr3 63,530,359 63,532,921 Zm00001d040752 sar1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 63,579,469 63,581,973 GRMZM2G069203 sat1 from: AF453837 Chr8 155,020,473 155,021,850 Zm00001d011735 sat1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 160,278,127 160,279,059 GRMZM2G013430 sat2 from: AF453838 Chr1 24,049,836 24,051,294 Zm00001d028154 sat2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 24,416,953 24,417,897 GRMZM5G816110 sat3 from: AF453836 Chr6 159,594,188 159,596,729 Zm00001d038737 sat3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 163,553,024 163,560,354 GRMZM2G466908 saur1 Chr6 86,723,314 86,724,099 Zm00001d036463 saur1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 89,312,912 89,313,355 GRMZM2G088753 sbe1 Classical Gene Chr5 63,346,023 63,352,952 Zm00001d014844 sbe1 Chr5 65,186,102 65,197,475 GRMZM2G073054 sbe3 Classical Gene Chr2 59,216,710 59,226,937 Zm00001d003817 sbe3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 60,752,443 60,763,179 GRMZM2G113470 sbip1a Chr4 9,896,475 9,902,642 Zm00001d048959 sbip1a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 10,754,326 10,760,391 GRMZM2G060922 sbip1b Chr8 106,815,228 106,820,100 Zm00001d010325 sbip1b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 109,745,230 109,750,097 GRMZM2G175038 sbip2a from: Entrez gene 542646 Chr1 52,193,686 52,196,261 Zm00001d028951 sbip2a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 52,645,733 52,648,243 GRMZM2G111136 sbp1 from: AJ011614 & assigned by the Grassius project to sbp10 (Yilmaz et al 2009) Chr5 88,828,896 88,831,814 Zm00001d015451 sbp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 91,106,167 91,109,100 GRMZM2G109354 sbp11 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 106,259,354 106,278,403 Zm00001d010309 sbp11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 109,067,495 109,086,927 GRMZM2G126827 sbp12 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 86,820,671 86,824,256 Zm00001d015410 sbp12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 89,049,594 89,053,097 GRMZM2G113779 sbp13 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 202,626,703 202,628,534 Zm00001d006451 sbp13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 208,544,401 208,546,453 GRMZM2G169270 sbp16 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 189,617,226 189,623,070 Zm00001d031487 sbp16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 191,766,320 191,771,809 GRMZM2G156756 sbp17 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 295,502,079 295,509,029 Zm00001d034730 sbp17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 300,925,472 300,932,654 GRMZM2G371033 sbp18 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 161,072,193 161,075,285 Zm00001d012015 sbp18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 166,514,041 166,517,345 GRMZM2G163813 sbp19 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 236,142,134 236,146,366 Zm00001d053775 sbp19 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 240,849,637 240,853,547 GRMZM2G168229 sbp2 from: AJ011615; assigned by the Grassius project to sbp26 (Yilmaz et al 2009) Chr4 235,838,405 235,842,060 Zm00001d053756 sbp2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 240,523,216 240,526,731 GRMZM2G065451 sbp20 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 238,318,275 238,321,628 Zm00001d053890 sbp20 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 243,050,411 243,053,629 GRMZM2G148467 sbp21 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 139,106,686 139,109,641 Zm00001d026175 sbp21 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 140,333,912 140,336,785 GRMZM5G878561 sbp22 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 159,420,552 159,425,244 Zm00001d042319 sbp22 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 161,006,234 161,009,799 GRMZM2G126018 sbp23 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 190,489,085 190,493,109 Zm00001d006028 sbp23 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 195,579,800 195,583,642 GRMZM2G133646 sbp24 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 50,944,910 50,952,180 Zm00001d040571 sbp24 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 50,763,985 50,771,779 GRMZM2G414805 sbp25 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 58,084,257 58,088,916 Zm00001d014698 sbp25 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 59,822,722 59,827,354 GRMZM2G097275 sbp27 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 77,973,223 77,978,271 Zm00001d015233 sbp27 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 80,234,208 80,239,340 GRMZM2G058588 sbp28 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 145,726,895 145,730,461 Zm00001d026491 sbp28 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 147,051,884 147,055,513 GRMZM2G067624 sbp29 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 151,254,398 151,256,086 Zm00001d021573 sbp29 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 156,465,329 156,466,981 GRMZM2G101499 sbp3 from: AJ011616 & assigned by the Grassius project to sbp14 (Yilmaz et al 2009) Chr6 95,232,272 95,235,580 Zm00001d036692 sbp3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 97,811,384 97,814,731 GRMZM2G156621 sbp31 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 131,224,969 131,228,486 GRMZM2G106798 sbp3 (GRASSIUS) assigned by the Grassius project, (Yilmaz et al 2009) Chr4 17,511,896 17,523,810 Zm00001d049165 sbp3 (GRASSIUS) Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 18,638,440 18,650,497 Zm00001d046906 sbp4 v4 Chr9 109,930,589 109,934,102 GRMZM2G110742 sbp4 (GRASSIUS) assigned by the Grassius project, (Yilmaz et al 2009) Chr7 57,077,560 57,082,391 Zm00001d019793 sbp4 (GRASSIUS) Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 62,169,440 62,170,161 GRMZM2G061734 sbp5 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 192,807,845 192,812,893 Zm00001d006091 sbp5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 197,898,982 197,903,861 GRMZM2G138421 sbp6 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 1,846,096 1,853,085 Zm00001d012916 sbp6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 1,908,305 1,915,026 GRMZM2G098557 sbp7 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 200,132,272 200,137,588 Zm00001d052905 sbp7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 204,257,286 204,262,667 GRMZM2G081127 sbp9 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 167,824 174,330 GRMZM2G437435 sbt1 Lopez et al., 2016 Chr10 15,035,904 15,038,278 GRMZM2G039538 sbt2 Lopez et al., 2016 Chr2 207,706,084 207,708,708 GRMZM2G363552 sbt3 Lopez et al., 2016 Chr7 160,351,370 160,353,986 GRMZM2G332976 sca1 from: EU965612 (Ma et al, 2015) Chr5 3,146,074 3,147,825 Zm00001d013015 sca1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 3,231,369 3,233,042 GRMZM2G028393 sci1 Classical Gene Chr8 133,996,633 133,997,534 Zm00001d011080 sci1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 138,416,663 138,416,884 GRMZM2G023872 scl1 Chr8 72,494,685 72,496,501 Zm00001d009646 scl1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 74,205,128 74,206,555 GRMZM2G014055 scmv1 Chr6 14,195,929 14,197,087 Zm00001d035390 scmv1 Chr6 24,034,207 24,035,363 GRMZM2G075676 scp1 from JF682634 Chr10 120,298,584 120,303,328 Zm00001d025526 scp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 121,359,009 121,363,755 GRMZM2G131516 scro1 from AF263457 Chr4 185,481,408 185,484,991 Zm00001d052380 scro1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 188,747,594 188,751,193 GRMZM2G121074 sda1 Leiboff et al., 2015 Chr2 7,661,318 7,666,576 Zm00001d002190 sda1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 7,649,644 7,654,759 AC233961.1_FG001 sdg101 Chr7 20,255,014 20,257,584 GRMZM2G147619 sdg102 Chr2 52,449,235 52,456,233 GRMZM2G074094 sdg103 Chr1 220,057,560 220,061,382 GRMZM2G021044 sdg104 Chr2 21,907,392 21,910,615 GRMZM2G140577 sdg105 Chr8 119,356,309 119,359,897 GRMZM2G409213 sdg106 Chr2 198,768,364 198,773,099 GRMZM2G357972 sdg107 Chr2 26,628,794 26,633,078 GRMZM2G149153 sdg108 Chr4 29,377,433 29,389,813 GRMZM2G130910 sdg110a Chr7 84,870,169 84,881,375 GRMZM2G033694 sdg110b Chr2 174,419,091 174,436,402 Zm00001d005563 sdg110b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 178,602,264 178,619,387 GRMZM2G117458 sdg111 Chr6 155,657,316 155,676,425 GRMZM2G139710 sdg113 Chr3 187,087,134 187,091,766 GRMZM2G033350 sdg115 Chr3 213,339,505 213,342,831 GRMZM2G105869 sdg116 Chr2 200,042,816 200,045,662 GRMZM2G172427 sdg117 Chr4 160,952,067 160,967,258 GRMZM2G054380 sdg118 Chr8 159,782,943 159,797,629 Zm00001d011956 sdg118 Chr8 165,140,334 165,155,029 GRMZM2G300955 sdg119 Chr2 177,370,536 177,375,918 GRMZM2G091916 sdg122 Chr1 14,508,652 14,510,556 GRMZM2G080462 sdg123 from: Entrez Gene 542096 Chr1 242,199,385 242,208,360 Zm00001d032990 sdg123 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 245,857,450 245,866,245 GRMZM2G473138 sdg127 Chr10 4,018,763 4,022,973 GRMZM2G013794 sdg128 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 72,261,177 72,305,728 Zm00001d019907 sdg128 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 74,613,007 74,659,068 GRMZM2G305124 sdg129 Chr5 71,873,816 71,875,082 Zm00001d015064 sdg129 Chr5 73,927,017 73,928,549 GRMZM2G457881 sdg130 Chr5 11,957,842 11,966,150 GRMZM2G034288 sdg136 Chr7 38,217,966 38,231,106 Zm00001d019520 sdg136 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 39,546,734 39,550,496 GRMZM2G025924 sdg137 Chr2 170,175,284 170,177,778 Zm00001d005445 sdg137 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 174,370,956 174,373,091 GRMZM2G164277 sdg140 Chr2 7,527,529 7,531,928 GRMZM2G164400 sdg140 Chr2 7,519,489 7,528,034 Zm00001d002185 sdg140 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 7,546,109 7,550,392 AC217415.3_FG004 se1 Haro von Mogel, 2014 Chr2 230,653,379 230,653,900 Zm00001d007657 se1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 237,080,087 237,080,608 GRMZM2G081626 see2a from: AJ131718 Chr8 137,286,214 137,293,588 Zm00001d011174 see2a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 141,805,331 141,812,617 GRMZM2G093032 see2b from: AF082347 Chr3 225,910,755 225,916,465 Zm00001d044495 see2b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 229,664,664 229,670,336 GRMZM2G169160 ser2 from: Y13053 Chr4 5,670,956 5,682,556 Zm00001d048856 ser2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 6,442,970 6,454,443 GRMZM5G870959 serk1 gene model GRMZM2G043670 on RefGen_v1 corresponds to the gene model GRMZM5G870959 on RefGen_v2. Chr10 121,772,419 121,777,860 Zm00001d025580 serk1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 122,855,595 122,861,043 GRMZM2G115420 serk2 Chr5 176,261,637 176,267,226 Zm00001d016928 serk2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 180,247,597 180,253,566 GRMZM2G150024 serk3 Chr4 124,660,672 124,667,062 Zm00001d050868 serk3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 127,596,451 127,602,837 GRMZM2G147424 sfb1 from: EU959706 and assigned by the Grassius project, (Yilmaz et al 2009) to s1fa2 Chr10 113,732,417 113,734,756 Zm00001d025339 sfb1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 114,701,647 114,705,196 GRMZM2G159632 sfp1 from: AF355602 Chr1 24,403,203 24,407,782 Zm00001d028162 sfp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 24,771,608 24,778,825 GRMZM2G123159 sgb102 Chr1 264,230,117 264,233,270 Zm00001d033620 sgb102 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 269,012,384 269,014,829 GRMZM2G074082 sgo1 Classical Gene Chr7 18,531,204 18,535,522 GRMZM2G074082 sgo1 from B73_v2 alignment to cDNA AY964185 | 63099688 Chr7 18,531,204 18,535,522 Zm00001d019148 sgo1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 19,180,261 19,184,573 GRMZM2G089713 sh1 Classical Gene Chr9 11,500,926 11,507,687 GRMZM2G089713 sh1 Chr9 11,500,926 11,507,687 Zm00001d045042 sh1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 10,906,934 10,912,944 GRMZM2G429899 sh2 Classical Gene Chr3 216,495,981 216,505,345 GRMZM2G429899 sh2 Chr3 216,495,981 216,505,345 Zm00001d044129 sh2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 219,979,958 219,989,574 GRMZM6G741210 shbp1 from: W21734 (v3) Chr3 178,865,444 178,897,469 GRMZM2G399073 shpl1 from: BT055135 Chr5 61,555,816 61,564,735 Zm00001d014792 shpl1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 63,348,326 63,353,481 GRMZM2G139073 si1 Classical Gene Chr6 84,949,624 84,954,298 Zm00001d036425 si1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 87,897,599 87,902,270 GRMZM2G149481 si606065d12 Chr1 33,322,465 33,326,460 GRMZM2G082007 si683005e02 Chr4 169,989,717 169,993,675 Zm00001d051870 si683005e02 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 172,950,400 172,953,761 GRMZM2G378452 si946003e12 Chr3 23,844,186 23,847,768 Zm00001d040023 si946003e12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 23,309,375 23,312,957 GRMZM2G176175 sid1 from: FJ686697; ereb121 locus assigned by the Grassius project, (Yilmaz et al 2009) Chr7 22,015,365 22,026,546 Zm00001d019230 sid1 Chr7 23,054,461 23,065,589 GRMZM2G100086 sig1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 39,680,080 39,682,830 GRMZM2G006736 sig1A from: AF058708 (chr 10 hit) Chr10 75,590,751 75,594,655 Zm00001d024507 sig1A Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 74,832,693 74,836,584 GRMZM2G543629 sig1B Chr4 30,954,610 30,958,718 Zm00001d049494 sig1B Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 32,383,217 32,386,961 GRMZM2G164084 sig2 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 264,527,252 264,530,002 GRMZM2G143392 sig2A from: AF099110 Chr4 17,349,492 17,354,543 Zm00001d049160 sig2A Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 18,466,281 18,470,669 GRMZM2G100086 sig2B aligns to cDNA AF099111 Chr1 39,680,080 39,682,830 GRMZM2G003182 sig3 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 231,692,547 231,695,297 Zm00001d028585 sig3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 40,036,028 40,038,476 GRMZM2G543629 sig5 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 30,954,610 30,958,718 GRMZM2G144196 sig6 from: Entrez Gene 542484 Chr5 647,402 650,238 Zm00001d012810 sig6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 684,894 687,528 GRMZM5G830932 sig7 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 168,024,789 168,028,473 Zm00001d039181 sig7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 172,035,940 172,039,648 GRMZM2G077436 sig8 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 168,300,149 168,302,190 Zm00001d039194 sig8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 172,321,981 172,324,231 GRMZM2G006736 sig9 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 75,590,751 75,594,655 GRMZM2G127141 simk1 alignment of Dq422149 and Ay433815 to B73_v2 Chr9 125,383,956 125,388,954 Zm00001d047349 simk1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 127,177,134 127,181,687 GRMZM2G319104 sin1 Chr6 46,506,476 46,518,999 GRMZM2G374971 sip1 Chr7 160,254,708 160,256,026 Zm00001d021901 sip1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 165,699,754 165,700,437 GRMZM2G090338 sir1 Chr6 157,217,904 157,222,724 Zm00001d038625 sir1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 161,162,525 161,167,432 GRMZM2G161664 sirk1 from Aquino et al., 2017 sequence alignment Chr9 133,799,373 133,804,572 GRMZM2G021786 sk1 Haywood et al., 2016 Chr2 27,602,064 27,606,189 Zm00001d002970 sk1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 28,350,907 28,355,040 GRMZM2G009506 sln1 Moon et al, 2013 Chr5 201,993,077 201,996,818 Zm00001d017806 sln1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 207,369,388 207,372,376 GRMZM2G031311 sm1 Casas et al., 2016 Chr6 133,839,846 133,843,446 Zm00001d037784 sm1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 137,680,490 137,684,176 GRMZM2G180283 sm2 Casas et al., 2016 Chr2 202,536,125 202,537,725 Zm00001d006446 sm2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 208,457,127 208,458,693 GRMZM2G136887 smh1 Classical Gene Chr8 139,912,821 139,920,531 GRMZM2G023667 smh3 Classical Gene Chr8 153,685,211 153,695,652 GRMZM2G108424 smh4 Classical Gene Chr3 204,430,351 204,438,078 Zm00001d043696 smh4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 207,623,073 207,630,659 GRMZM2G163291 smh5 Classical Gene Chr3 14,476,929 14,481,586 GRMZM2G095239 smh6 Classical Gene Chr5 17,123,432 17,138,841 Zm00001d013694 smh6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 17,707,483 17,723,908 GRMZM2G030148 smk1 Li, et al., 2014 Chr2 216,076,499 216,078,010 Zm00001d007100 smk1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 222,255,509 222,256,819 GRMZM2G023528 smk2 Yang et al., 2017 Chr4 239,684,932 239,688,530 Zm00001d053981 smk2 Chr4 244,568,059 244,571,526 GRMZM2G122810 smt1 Chr7 18,150,408 18,159,227 Zm00001d019139 smt1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 18,791,758 18,800,979 GRMZM2G075701 smt2 Chr1 8,025,216 8,027,013 Zm00001d027548 smt2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 8,046,302 8,047,417 GRMZM2G430745 smu2 Chr10 1,679,131 1,681,892 Zm00001d023239 smu2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 1,236,959 1,248,543 GRMZM2G077278 snrk1a1 Chr6 159,785,916 159,790,437 Zm00001d038745 snrk1a1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 163,755,404 163,785,784 GRMZM2G180704 snrk1a2 Chr2 154,579,939 154,587,570 Zm00001d005108 snrk1a2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 158,564,427 158,572,132 GRMZM2G138814 snrk1a3 Chr1 52,072,966 52,083,007 Zm00001d028946 snrk1a3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 52,499,430 52,509,398 GRMZM2G035809 snrkII1 from sequence EU676033 Chr9 121,136,691 121,141,166 Zm00001d047220 snrkII1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 122,717,205 122,721,608 GRMZM2G066867 snrkII10 from sequence EU676041 Chr5 18,469,442 18,472,522 Zm00001d013736 snrkII10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 18,918,646 18,921,698 GRMZM2G063961 snrkII11 from sequence EU676042 Chr6 150,654,910 150,660,102 Zm00001d038326 snrkII11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 154,559,425 154,564,538 GRMZM2G056732 snrkII2 from sequence EU676034 Chr7 166,410,296 166,416,118 Zm00001d022179 snrkII2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 171,984,109 171,989,937 GRMZM2G180916 snrkII3 from sequence EU676035 Chr1 94,897,504 94,901,091 Zm00001d029975 snrkII3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 97,112,730 97,116,269 GRMZM2G110922 snrkII4 from sequence EU676036 Chr3 174,813,369 174,818,806 Zm00001d042695 snrkII4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 177,276,266 177,281,835 GRMZM2G110908 snrkII5 from sequence EU676037 Chr10 148,736,929 148,738,463 Zm00001d026690 snrkII5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 150,050,330 150,051,860 GRMZM2G130018 snrkII6 from: Entrez Gene 100216941 Chr4 115,177,727 115,188,805 Zm00001d050723 snrkII6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 118,811,903 118,822,922 GRMZM2G155593 snrkII7 aligns to sequence EU676039 Chr2 51,441,153 51,446,361 Zm00001d003659 snrkII7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 52,839,413 52,844,416 GRMZM2G138861 snrkII8 from aligmnent to sequence EU676040 Chr1 280,356,771 280,364,881 Zm00001d034161 snrkII8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 285,417,447 285,425,538 GRMZM2G114739 so1 B73_v2 alignment to FJ436404 and AY104501 Chr1 193,898,445 193,902,203 Zm00001d031617 so1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 196,224,574 196,228,047 GRMZM2G025992 sod2 Classical Gene Chr7 171,775,019 171,778,224 Zm00001d022505 sod2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 179,056,206 179,061,245 GRMZM2G059991 sod3 Classical Gene Chr6 136,070,517 136,074,741 Zm00001d037859 sod3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 140,001,946 140,006,130 GRMZM2G169890 sod4 Classical Gene Chr1 60,147,420 60,151,012 Zm00001d029170 sod4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 60,930,751 60,934,311 GRMZM2G058522 sod9 Classical Gene Chr9 129,535,000 129,538,722 Zm00001d047479 sod9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 131,494,599 131,498,207 GRMZM2G175423 sodh1 from: EU963336 Chr1 197,301,249 197,304,338 Zm00001d031727 sodh1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 199,715,758 199,718,643 GRMZM2G025222 spi1 Classical Gene Chr3 69,968,705 69,970,558 GRMZM2G025222 spi1 Chr3 69,968,705 69,970,558 Zm00001d044069 spi1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 218,287,295 218,289,461 GRMZM2G000278 spk1 from: BT055373 Chr5 171,731,069 171,736,269 Zm00001d016783 spk1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 175,764,979 175,770,061 GRMZM2G129913 spo1 Zhang et al, 2014 Chr5 7,125,276 7,129,809 GRMZM5G890820 spo2 Zhang et al, 2014 Chr4 32,840,049 32,842,275 Zm00001d049550 spo2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 34,374,982 34,377,834 GRMZM2G052581 spo3 Zhang et al, 2014 Chr1 43,509,811 43,512,799 Zm00001d028705 spo3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 43,725,600 43,726,910 GRMZM2G055489 spp1 Classical Gene Chr8 115,832,232 115,838,487 Zm00001d010523 spp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 119,143,166 119,149,436 GRMZM2G097641 spp2 Sosso et al., 2015 Chr10 89,431,021 89,434,146 Zm00001d024821 spp2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 89,613,645 89,616,637 GRMZM2G060296 spr1 Chr1 1,960,833 1,968,021 Zm00001d027293 spr1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 2,026,825 2,034,154 GRMZM2G046576 spr9 from: Y10117 Chr6 121,303,197 121,311,768 Zm00001d037422 spr9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 125,049,232 125,057,616 GRMZM5G875238 sps1 Classical Gene Chr8 161,465,833 161,471,194 Zm00001d012036 sps1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 166,917,606 166,923,260 GRMZM2G140107 sps2 from: T26951 (chr 3 hit) Chr3 161,295,516 161,301,138 GRMZM2G108225 sqs1 From: ENTREZ GENE 541614 Chr5 3,667,095 3,677,998 Zm00001d013048 sqs1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 3,760,185 3,771,088 GRMZM2G029396 sqsh1 Chr1 290,074,104 290,082,929 AC217293.3_FG007 srk1 from: BT060988 Chr2 232,381,878 232,388,093 Zm00001d007745 srk1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 238,606,921 238,613,493 GRMZM2G105019 srph1 from NM_001155651 in Wang et al 2014 Chr3 217,545,398 217,552,377 Zm00001d044172 srph1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 221,071,103 221,078,032 GRMZM2G042407 srs1 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 207,433,916 207,443,393 Zm00001d032040 srs1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 210,206,509 210,211,370 GRMZM2G080295 srs2 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 196,299,773 196,301,206 Zm00001d006209 srs2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 201,896,427 201,897,959 GRMZM2G017606 srs3 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 216,534,703 216,536,379 Zm00001d053208 srs3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 220,087,908 220,093,065 GRMZM2G097683 srs4 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 60,161,264 60,163,883 Zm00001d014762 srs4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 61,966,310 61,967,872 GRMZM2G108798 srs5 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 85,368,896 85,371,594 Zm00001d036426 srs5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 87,953,855 87,955,348 GRMZM2G450459 srs6 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 143,217,455 143,220,101 Zm00001d038081 srs6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 147,117,119 147,118,645 GRMZM2G135783 srs7 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 142,938,485 142,940,360 Zm00001d021285 srs7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 147,853,086 147,854,863 GRMZM2G179021 srs8 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 143,145,425 143,146,225 Zm00001d021290 srs8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 148,061,214 148,062,014 GRMZM2G129451 ss1 Classical Gene Chr9 17,640,522 17,651,342 Zm00001d045261 ss1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 17,401,822 17,412,594 GRMZM2G044744 ss4 Chr8 124,838,621 124,847,166 Zm00001d010821 ss4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 128,734,662 128,743,577 GRMZM2G130043 ss5 Liu et al., 2015 Chr4 172,635,729 172,706,662 Zm00001d051976 ss5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 175,714,876 175,730,530 GRMZM2G090935 ssp1 from BT063485 Chr4 233,478,819 233,482,558 Zm00001d053643 ssp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 238,099,957 238,103,666 GRMZM2G098520 ssu1 Classical Gene Chr4 190,228,051 190,230,534 GRMZM2G113033 ssu1 Classical Gene Chr2 143,429,392 143,430,581 Zm00001d004894 ssu1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 147,269,761 147,270,804 Zm00001d052595 ssu1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 194,257,728 194,258,862 GRMZM2G113033 ssu2 Classical Gene Chr2 143,429,392 143,430,581 Zm00001d004894 ssu2 Chr2 147,269,761 147,270,804 GRMZM2G177098 stc1 Classical Gene Chr9 11,745,997 11,754,981 GRMZM2G177098 stc1 from alignment of B73_v2 assembly to cDNA sequence accession AF296122 (Aug 2012 M Schaeffer) Chr9 11,745,997 11,754,981 Zm00001d045054 stc1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 11,188,093 11,192,433 GRMZM2G165433 stk1 Classical Gene Chr9 11,782,450 11,785,572 Zm00001d045056 stk1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 11,221,592 11,224,808 GRMZM2G179268 stk2 from: ABF81696 Chr2 41,122,571 41,124,341 Zm00001d003377 stk2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 42,140,112 42,141,719 GRMZM2G301647 stk3 Wang et al., 2017 Chr4 175,306,259 175,309,558 Zm00001d052067 stk3 Chr4 178,304,940 178,308,282 GRMZM2G156013 stk4 Chr10 141,014,946 141,018,420 Zm00001d026267 stk4 Chr10 142,376,205 142,380,294 GRMZM2G023073 stm1 Chr10 77,758,100 77,774,208 Zm00001d024540 stm1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 77,144,191 77,149,860 GRMZM2G097768 stp1 Classical Gene Chr8 73,418,620 73,424,707 Zm00001d009669 stp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 75,146,233 75,152,432 GRMZM2G138060 su1 Classical Gene Chr4 41,396,390 41,405,179 GRMZM2G138060 su1 Chr4 41,396,390 41,405,179 Zm00001d049753 su1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 43,110,569 43,119,167 GRMZM2G348551 su2 Classical Gene Chr6 113,414,100 113,419,156 Zm00001d037234 su2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 117,124,065 117,128,209 GRMZM2G090905 su4 From Genbank sequence homology Chr6 144,755,799 144,758,179 Zm00001d038121 su4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 148,612,409 148,616,192 GRMZM2G064799 sudh1 Chr7 4,239,369 4,244,199 Zm00001d018758 sudh1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 4,402,578 4,407,434 GRMZM2G076524 sudh10 Chr5 13,264,659 13,269,113 GRMZM2G306945 sudh11 Chr1 64,881,015 64,884,264 GRMZM2G146965 sudh12 Chr1 262,265,889 262,269,879 GRMZM2G302259 sudh2 from: BT037104 (chr 4 hit) Chr4 37,053,697 37,057,117 Zm00001d049649 sudh2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 38,706,344 38,709,739 GRMZM2G056912 sudh3 Chr8 22,054,607 22,060,804 GRMZM2G079888 sudh4 Chr2 237,069,904 237,075,210 GRMZM2G109271 sudh5 Chr1 62,981,705 63,005,931 GRMZM2G398876 sudh6 Chr10 115,607,469 115,611,338 GRMZM2G134134 sudh7 Chr6 6,270,568 6,274,593 GRMZM2G023760 sudh8 Chr9 14,624,670 14,625,146 GRMZM2G160685 sudh9 Chr6 154,876,071 154,884,333 GRMZM2G105604 sum1 from: D83391 Chr3 216,674,441 216,678,588 Zm00001d044138 sum1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 220,166,617 220,170,536 GRMZM2G053898 sumo1a Augustine et al, 2016 Chr8 161,569,233 161,573,399 GRMZM2G082390 sumo1b Augustine et al, 2016 Chr8 161,721,257 161,724,576 Zm00001d012044 sumo1b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 167,187,771 167,190,749 GRMZM2G305196 sumo2 Augustine et al, 2016 Chr7 159,960,915 159,961,570 GRMZM2G073404 sumov1 Augustine et al, 2016 Chr8 141,677,418 141,681,979 Zm00001d011308 sumov1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 146,317,656 146,322,089 GRMZM2G109818 sun1 Classical Gene Chr5 88,695,793 88,701,952 GRMZM2G109818 sun1 Chr5 88,695,793 88,701,952 Zm00001d015450 sun1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 90,962,311 90,968,591 GRMZM2G440614 sun2 Classical Gene Chr3 38,600,230 38,605,885 GRMZM2G440614 sun2 from alignment of sequence accession BT055722 (Apr 2011) Chr3 38,600,230 38,605,885 Zm00001d040331 sun2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 38,375,080 38,380,515 GRMZM2G005483 sun4 Assigned by BLAST at MaizeGDB (M Schaeffer Apr 2011) Chr8 165,131,574 165,135,243 GRMZM2G005483 sun4 Classical Gene Chr8 165,131,574 165,135,243 Zm00001d012240 sun4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 170,777,809 170,781,884 AC194341.4_FG003 sun5 by alignment on RefGen_V2 (M Schaeffer Apr 2011) Chr8 140,924,162 140,926,362 AC194341.4_FG003 sun5 Classical Gene Chr8 140,924,162 140,926,362 Zm00001d011277 sun5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 145,550,689 145,553,038 GRMZM2G152908 sus1 Classical Gene Chr9 122,479,052 122,485,725 Zm00001d047253 sus1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 124,178,172 124,184,872 GRMZM2G318780 sus2 from AY124703 Chr1 56,787,028 56,794,227 Zm00001d029091 sus2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 57,485,976 57,493,258 GRMZM2G034302 sut1 B73_v2 alignment to cDNA AB008464 Chr1 15,069,084 15,074,473 Zm00001d027854 sut1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 15,301,583 15,306,925 GRMZM2G307561 sut2 from AY603492 Chr3 94,809,651 94,815,766 Zm00001d041192 sut2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 104,338,411 104,343,309 GRMZM2G083248 sut3 Sosso et al., 2015 Chr1 243,274,177 243,277,640 Zm00001d033011 sut3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 246,870,441 246,874,115 GRMZM2G145107 sut4 from AY581895 Chr5 216,637,674 216,642,140 Zm00001d018527 sut4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 222,512,491 222,516,983 GRMZM2G081589 sut5 Sosso et al., 2015 Chr5 176,533,898 176,537,221 Zm00001d016938 sut5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 180,472,917 180,476,181 GRMZM2G106741 sut6 Sosso et al., 2015 Chr4 124,976,888 124,980,047 Zm00001d050873 sut6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 127,915,099 127,918,352 GRMZM2G087901 sut7 blast match to AY106212 on 9L " Sucrose transporter" Chr9 151,514,437 151,518,716 Zm00001d048311 sut7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 154,421,758 154,426,112 GRMZM2G368827 sweet11 Sosso et al., 2015 Chr1 194,965,437 194,968,347 Zm00001d031647 sweet11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 197,308,955 197,311,791 GRMZM2G133322 sweet12a Sosso et al., 2015 Chr1 59,182,679 59,185,966 Zm00001d029135 sweet12a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 59,948,045 59,951,123 GRMZM2G099609 sweet12b Sosso et al., 2015 Chr9 130,027,643 130,030,345 Zm00001d047487 sweet12b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 131,985,732 131,987,306 GRMZM2G173669 sweet13a Sosso et al., 2015 Chr10 14,767,640 14,770,295 Zm00001d023677 sweet13a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 15,030,181 15,032,801 GRMZM2G021706 sweet13b Sosso et al., 2015 Chr10 14,648,064 14,650,932 Zm00001d023673 sweet13b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 14,795,157 14,798,022 GRMZM2G179349 sweet13c Sosso et al., 2015 Chr3 108,721,006 108,722,375 Zm00001d041067 sweet13c Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 94,632,377 94,634,331 GRMZM2G094955 sweet14a Sosso et al., 2015 Chr2 223,375,329 223,377,937 Zm00001d007365 sweet14a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 229,754,222 229,756,856 GRMZM2G015976 sweet14b Sosso et al., 2015 Chr4 21,691,924 21,695,433 Zm00001d049252 sweet14b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 22,932,092 22,935,601 GRMZM2G168365 sweet15a Sosso et al., 2015 Chr4 96,336,663 96,338,566 Zm00001d050577 sweet15a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 101,826,608 101,828,504 GRMZM5G872392 sweet15b Sosso et al., 2015 Chr5 164,895,210 164,898,398 Zm00001d016590 sweet15b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 168,752,444 168,755,159 GRMZM2G107597 sweet16 Sosso et al., 2015 Chr1 57,248,463 57,251,591 Zm00001d029098 sweet16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 57,988,733 57,991,597 GRMZM2G106462 sweet17a Sosso et al., 2015 Chr3 56,813,678 56,821,576 Zm00001d040656 sweet17a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 56,766,328 56,774,152 GRMZM2G111926 sweet17b Sosso et al., 2015 Chr8 33,368,351 33,373,788 Zm00001d009071 sweet17b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 34,288,986 34,294,478 GRMZM2G039365 sweet1a Sosso et al., 2015 Chr3 171,792,049 171,795,701 Zm00001d000222 sweet1a Gene model association inferred from similarity with B73 RefGen_v3 gene models B73V4_ctg26 144,186 147,832 GRMZM2G153358 sweet1b Sosso et al., 2015 Chr6 148,107,348 148,110,301 Zm00001d038226 sweet1b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 151,988,250 151,991,045 GRMZM2G324903 sweet2 Sosso et al., 2015 Chr8 58,837,906 58,840,227 Zm00001d009365 sweet2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 60,083,986 60,086,634 GRMZM2G179679 sweet3a Sosso et al., 2015 Chr8 112,056,618 112,058,331 Zm00001d010440 sweet3a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 115,240,665 115,242,366 GRMZM2G060974 sweet3b Sosso et al., 2015 Chr3 2,955,821 2,957,584 Zm00001d039347 sweet3b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 2,201,670 2,203,002 GRMZM2G000812 sweet4a Sosso et al., 2015 Chr5 126,853,038 126,855,915 Zm00001d015905 sweet4a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 130,027,454 130,030,346 GRMZM2G144581 sweet4b Sosso et al., 2015 Chr5 127,638,855 127,642,404 Zm00001d015914 sweet4b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 130,947,371 130,950,710 GRMZM2G137954 sweet4c Sosso et al., 2015 Chr5 127,500,983 127,504,476 Zm00001d015912 sweet4c Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 130,787,030 130,789,864 GRMZM2G157675 sweet6a Sosso et al., 2015 Chr3 223,847,899 223,851,013 Zm00001d044421 sweet6a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 227,515,476 227,518,586 GRMZM2G416965 sweet6b Sosso et al., 2015 Chr8 141,481,938 141,485,043 Zm00001d011299 sweet6b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 146,128,641 146,131,503 GRMZM2G009785 sxd1 Classical Gene Chr5 133,540,574 133,557,141 Zm00001d015985 sxd1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 136,805,708 136,822,194 GRMZM2G387890 syd1 Chr6 118,452,039 118,460,501 GRMZM2G467799 syd1 Chr6 118,478,929 118,501,925 Zm00001d037346 syd1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 122,234,832 122,284,355 GRMZM2G081955 tab2 Belcher et al., 2015 Chr5 183,533,765 183,536,017 Zm00001d017179 tab2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 188,141,861 188,144,082 GRMZM2G111906 tacs1 Classical Gene Chr6 82,660,395 82,663,470 GRMZM2G111906 tacs1 Chr6 82,660,395 82,663,470 GRMZM2G002276 taf1 Classical Gene Chr3 179,837,079 179,842,136 Zm00001d042879 taf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 182,649,721 182,654,210 GRMZM2G039113 tan1 Classical Gene Chr6 142,758,475 142,760,706 Zm00001d038060 tan1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 146,619,927 146,621,546 GRMZM2G075844 tap1 Chr5 61,239,228 61,243,371 Zm00001d014785 tap1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 63,016,459 63,020,299 GRMZM2G127160 tar1 from alignment to sequence EU872320 (June 2012 MLS) Chr6 123,615,202 123,618,258 Zm00001d037498 tar1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 127,318,662 127,321,705 GRMZM2G066345 tar2 Chr3 12,650,515 12,654,190 Zm00001d039691 tar2 Chr3 11,918,669 11,922,644 GRMZM2G141810 tar3 from Bernardi et al 2012 Chr6 129,844,054 129,847,591 Zm00001d037674 tar3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 133,714,246 133,717,685 GRMZM2G139813 tat1 Chr2 225,968,332 225,976,565 Zm00001d007462 tat1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 232,247,283 232,255,516 AC233950.1_FG002 tb1 Classical Gene Chr1 265,811,311 265,813,044 Zm00001d033673 tb1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 270,553,676 270,554,776 GRMZM2G149238 tbp1 from: L13301 Chr1 259,016,743 259,021,894 Zm00001d033472 tbp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 263,622,481 263,627,725 GRMZM2G161418 tbp2 Classical Gene Chr5 15,340,632 15,345,558 Zm00001d013631 tbp2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 15,866,934 15,871,877 GRMZM2G118515 tcp1 from Frelin et al 2012 Chr8 159,216,940 159,224,411 Zm00001d011918 tcp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 164,544,656 164,552,085 GRMZM2G124911 tcp2 from Frelin et al 2012 Chr3 154,750,579 154,774,482 Zm00001d042213 tcp2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 156,286,694 156,310,438 GRMZM2G142751 tcptf10 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 112,768,227 112,770,230 Zm00001d037221 tcptf10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 116,436,142 116,437,281 GRMZM2G166687 tcptf11 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 214,354,391 214,355,375 Zm00001d032217 tcptf11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 217,455,034 217,455,756 GRMZM2G093895 tcptf12 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 10,294,382 10,296,488 Zm00001d023565 tcptf12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 10,313,565 10,314,782 GRMZM2G359599 tcptf13 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 612,258 614,155 Zm00001d048591 tcptf13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 821,353 823,207 GRMZM2G465091 tcptf14 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 132,055,803 132,056,847 Zm00001d025896 tcptf14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 133,245,638 133,246,261 GRMZM2G060319 tcptf15 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 82,385,034 82,386,103 Zm00001d050389 tcptf15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 85,370,757 85,371,581 GRMZM2G178603 tcptf16 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 188,505,434 188,506,555 Zm00001d017350 tcptf16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 193,493,247 193,493,909 GRMZM2G458087 tcptf17 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 110,222,622 110,224,294 Zm00001d025250 tcptf17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 111,056,632 111,058,362 GRMZM2G064628 tcptf18 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 110,809,038 110,810,529 Zm00001d020433 tcptf18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 114,008,489 114,009,250 AC199782.5_FG003 tcptf19 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 195,005,257 195,006,904 Zm00001d006165 tcptf19 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 200,270,198 200,271,190 GRMZM2G003944 tcptf2 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 205,135,012 205,137,037 Zm00001d053020 tcptf2 Chr4 209,499,482 209,500,645 GRMZM2G034638 tcptf20 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 160,527,351 160,529,186 Zm00001d011985 tcptf20 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 165,936,679 165,937,626 GRMZM2G107031 tcptf21 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 197,227,445 197,228,576 Zm00001d031725 tcptf21 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 199,651,976 199,653,028 GRMZM2G135461 tcptf22 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 142,954,944 142,956,691 Zm00001d051154 tcptf22 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 146,257,824 146,259,689 GRMZM2G120151 tcptf23 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 158,563,456 158,566,518 Zm00001d038683 tcptf23 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 162,529,258 162,530,154 GRMZM2G015037 tcptf24 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 24,477,984 24,481,369 Zm00001d008919 tcptf24 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 25,254,637 25,255,914 GRMZM2G078077 tcptf25 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 145,641,628 145,642,678 Zm00001d051216 tcptf25 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 148,970,275 148,970,931 GRMZM2G077755 tcptf26 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 207,185,179 207,187,500 Zm00001d018045 tcptf26 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 212,792,080 212,793,282 GRMZM2G414114 tcptf27 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 225,192,935 225,197,146 GRMZM2G062711 tcptf28 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 55,947,182 55,947,871 GRMZM2G148022 tcptf29 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 173,529,415 173,541,170 Zm00001d012725 tcptf29 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 179,214,402 179,228,713 GRMZM2G166946 tcptf30 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 194,948,766 194,951,387 Zm00001d043368 tcptf30 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 197,856,616 197,857,467 GRMZM2G089638 tcptf31 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 140,859,692 140,861,716 Zm00001d041866 tcptf31 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 141,608,609 141,609,859 GRMZM2G031905 tcptf32 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 27,463,599 27,465,214 AC205574.3_FG006 tcptf33 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 3,475,925 3,478,586 Zm00001d039371 tcptf33 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 2,709,285 2,712,754 AC234521.1_FG006 tcptf34 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 22,891,424 22,892,551 Zm00001d002818 tcptf34 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 23,555,296 23,556,423 GRMZM2G055024 tcptf35 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 2,551,378 2,555,043 Zm00001d048674 tcptf35 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 3,124,349 3,125,476 GRMZM2G424261 tcptf36 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 112,133,491 112,135,588 Zm00001d025295 tcptf36 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 113,006,222 113,009,023 GRMZM2G088440 tcptf37 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 182,307,219 182,309,604 Zm00001d005763 tcptf37 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 187,123,029 187,124,514 GRMZM2G180568 tcptf38 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 168,258,012 168,259,093 Zm00001d022256 tcptf38 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 173,754,099 173,755,070 GRMZM2G170232 tcptf39 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 36,959,864 36,961,776 Zm00001d049645 tcptf39 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 38,599,389 38,600,985 GRMZM2G445944 tcptf4 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 216,656,588 216,657,717 Zm00001d018530 tcptf4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 222,531,797 222,532,420 GRMZM2G096610 tcptf40 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 100,088,723 100,089,636 Zm00001d025033 tcptf40 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 100,593,766 100,594,296 GRMZM2G416524 tcptf41 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 136,203,178 136,208,519 Zm00001d004791 tcptf41 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 139,598,222 139,598,940 AC213524.3_FG003 tcptf42 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 193,546,929 193,548,421 Zm00001d031597 tcptf42 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 195,867,646 195,869,138 GRMZM2G020805 tcptf43 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 235,465,951 235,472,063 Zm00001d007868 tcptf43 Chr2 241,313,813 241,315,135 GRMZM2G089361 tcptf44 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 4,945,651 4,947,211 Zm00001d013119 tcptf44 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 5,078,404 5,079,549 GRMZM2G115516 tcptf5 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 285,381,000 285,385,544 Zm00001d034353 tcptf5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 290,438,168 290,439,328 AC190734.2_FG003 tcptf6 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 11,858,801 11,859,880 Zm00001d013467 tcptf6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 12,293,289 12,294,368 GRMZM2G035944 tcptf7 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 122,433,073 122,435,587 Zm00001d010730 tcptf7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 126,238,922 126,239,749 GRMZM2G092214 tcptf8 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 158,493,312 158,495,256 Zm00001d042305 tcptf8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 160,028,234 160,029,208 GRMZM2G113888 tcptf9 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 5,004,014 5,006,205 Zm00001d044836 tcptf9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 4,608,923 4,609,996 GRMZM2G016145 tcrr1 Chr4 70,600,591 70,601,871 Zm00001d050200 tcrr1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 73,314,108 73,315,352 GRMZM2G075624 tct1 from BT068707 Chr5 67,851,004 67,853,565 Zm00001d014954 tct1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 69,765,432 69,768,123 GRMZM2G300133 td1 From sequence in Fig 4 of Bommert et al., 2005 Chr5 61,698,661 61,702,214 Zm00001d014793 td1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 63,456,839 63,460,120 GRMZM2G055458 tdpk1 Guan et al., 2014 Chr3 66,270,831 66,282,839 Zm00001d040798 tdpk1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 66,473,780 66,485,780 GRMZM5G864815 tdpk2 Guan et al., 2014 Chr6 137,792,544 137,795,002 Zm00001d037916 tdpk2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 141,931,015 141,933,513 GRMZM2G321778 tdy1 Classical Gene Chr6 166,836,363 166,837,893 GRMZM2G321778 tdy1 from B73_v2 alignment to genomic sequence FJ376984 Chr6 166,836,363 166,837,893 Zm00001d039135 tdy1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 170,789,131 170,789,949 GRMZM5G840560 tdy2 Slewinski et al., 2012; homology to sb04g038510 Chr5 217,413,183 217,431,897 Zm00001d018565 tdy2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 223,299,688 223,305,883 GRMZM2G085113 te1 Classical Gene Chr3 165,216,844 165,220,769 GRMZM2G085113 te1 Chr3 165,216,844 165,220,769 Zm00001d042445 te1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 167,821,561 167,825,000 GRMZM2G144166 tel2 Chr5 181,264,982 181,272,627 GRMZM2G078283 tena1 Guan et al., 2014 Chr4 48,570,462 48,572,773 GRMZM2G148896 tena2 Guan et al., 2014 Chr1 201,771,782 201,775,619 Zm00001d031854 tena2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 204,236,527 204,241,415 GRMZM2G080501 tena3 Guan et al, 2014 Chr9 135,600,972 135,602,731 Zm00001d047640 tena3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 137,872,908 137,874,613 GRMZM2G017831 tfIIB1 Chr9 148,929,810 148,933,147 Zm00001d048180 tfIIB1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 151,800,917 151,803,916 GRMZM2G101511 tga1 Classical Gene Chr4 44,534,815 44,539,478 GRMZM2G101511 tga1 Chr4 44,534,815 44,539,478 Zm00001d049822 tga1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 46,350,597 46,355,118 GRMZM2G044027 tgd1 Chr1 41,473,411 41,478,103 Zm00001d028653 tgd1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 41,833,738 41,838,204 GRMZM2G025054 tgz15a from: AJ421525 (chr 10 hit) Chr10 125,323,532 125,327,383 Zm00001d025689 tgz15a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 126,291,063 126,294,862 GRMZM2G045005 tgz21 from: AJ488103 Chr2 38,044,187 38,048,031 Zm00001d003291 tgz21 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 38,955,003 38,958,609 GRMZM2G090086 tha1 from partial cDNA U71123 Chr2 128,922,840 128,930,111 GRMZM2G472651 tha4 alignment of cDNA AF145755 | 4877983 (v2 Jul 2011) Chr1 253,336,039 253,339,554 Zm00001d033317 tha4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 258,850,341 258,853,608 GRMZM2G300408 tha5 provided by A Barkan (2010) Chr9 14,541,001 14,542,356 Zm00001d045144 tha5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 14,222,619 14,223,173 AC217965.2_FG012 tha8 From: AY530730 Chr8 15,108,789 15,109,580 Zm00001d008641 tha8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 15,544,170 15,545,233 GRMZM2G128454 tha9 from alignment to sequence AF145756 Chr5 17,372,076 17,374,433 GRMZM2G018375 thi1 aligns to sequence U17350 on B73_v2 reference genome Chr8 137,677,256 137,679,026 Zm00001d011183 thi1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 142,217,718 142,219,220 GRMZM2G074097 thi2 aligns to sequence U17351 on ref. genome B73_v2 (MLS Jan 2013) Chr3 218,917,243 218,918,947 Zm00001d044228 thi2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 222,461,984 222,463,639 GRMZM2G401934 thi3 from sequence AM167973 alignment to B73_v2 Chr3 138,804,559 138,811,009 Zm00001d041829 thi3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 139,490,055 139,496,394 GRMZM2G027663 thic1 Guan et al., 2014 Chr1 256,626,740 256,633,146 Zm00001d033383 thic1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 261,132,562 261,138,355 GRMZM2G094558 thim1 Yazdani et al., 2013 Chr8 47,311,260 47,314,747 Zm00001d009264 thim1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 48,669,883 48,672,784 GRMZM2G085474 thl1 Chr1 180,427,789 180,433,544 Zm00001d031212 thl1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 182,379,167 182,384,473 GRMZM2G473389 tho1 Chr1 4,284,638 4,287,038 Zm00001d027400 tho1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 4,405,004 4,406,685 GRMZM2G050570 thr1 Chr3 206,609,421 206,611,387 Zm00001d043780 thr1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 210,000,302 210,002,017 GRMZM2G157219 thx1 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 164,397,872 164,405,814 Zm00001d038994 thx1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 168,356,470 168,357,501 GRMZM2G415229 thx10 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 140,445,959 140,448,997 Zm00001d026245 thx10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 141,743,929 141,746,414 GRMZM2G016649 thx12 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 22,414,453 22,418,920 Zm00001d002801 thx12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 23,082,802 23,086,615 GRMZM2G134439 thx13 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 98,309,006 98,312,767 Zm00001d015605 thx13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 100,769,867 100,773,584 GRMZM2G163157 thx14 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 149,680,318 149,681,806 Zm00001d011571 thx14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 154,708,719 154,709,666 GRMZM2G021831 thx15 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 46,408,460 46,410,063 Zm00001d003549 thx15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 47,683,309 47,684,466 GRMZM2G063203 thx16 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 149,923,554 149,927,268 Zm00001d051316 thx16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 153,362,817 153,366,616 GRMZM2G080583 thx17 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 209,815,458 209,817,472 Zm00001d043902 thx17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 213,345,213 213,346,432 GRMZM2G314660 thx18 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 3,070,619 3,075,128 Zm00001d027335 thx18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 3,172,313 3,176,736 GRMZM2G414159 thx19 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 22,121,290 22,125,541 Zm00001d013849 thx19 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 22,609,420 22,613,930 GRMZM2G392168 thx2 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 119,936,505 119,938,289 Zm00001d025514 thx2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 120,969,085 120,970,263 GRMZM2G169580 thx20 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 190,292,136 190,295,846 Zm00001d017420 thx20 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 195,392,064 195,395,934 GRMZM2G037128 thx21 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 241,077,710 241,081,030 Zm00001d054080 thx21 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 246,034,945 246,038,140 GRMZM2G111760 thx22 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 67,208,649 67,211,604 Zm00001d014938 thx22 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 69,105,228 69,108,023 GRMZM2G156348 thx23 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 12,103,921 12,107,093 Zm00001d002424 thx23 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 12,400,461 12,403,506 GRMZM2G380094 thx24 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 175,099,364 175,100,572 Zm00001d016876 thx24 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 179,111,776 179,112,984 GRMZM2G047370 thx25 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 126,511,889 126,515,647 Zm00001d025720 thx25 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 127,515,419 127,518,791 GRMZM2G002978 thx26 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 59,987,056 59,992,370 Zm00001d003836 thx26 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 61,532,097 61,537,459 AC209784.3_FG011 thx27 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 181,029,394 181,032,191 Zm00001d042917 thx27 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 183,872,097 183,874,894 GRMZM2G428470 thx28 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 114,575,016 114,577,006 Zm00001d000045 thx28 Gene model association inferred from similarity with B73 RefGen_v3 gene models B73V4_ctg182 953,004 953,960 GRMZM2G326783 thx29 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 134,290,370 134,296,361 Zm00001d047589 thx29 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 136,494,931 136,499,410 GRMZM5G850092 thx3 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 197,161,489 197,162,856 Zm00001d052798 thx3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 201,305,242 201,306,120 GRMZM2G481163 thx4 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 94,888,973 94,890,564 Zm00001d029974 thx4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 97,104,476 97,105,441 GRMZM2G016637 thx5 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 25,703,021 25,704,825 Zm00001d035457 thx5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 27,101,237 27,102,244 GRMZM2G339957 thx6 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 154,781,227 154,784,741 Zm00001d011730 thx6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 160,093,938 160,094,990 GRMZM2G023119 thx7 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 122,587,640 122,590,008 Zm00001d030350 thx7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 124,513,774 124,516,163 GRMZM2G379179 thx8 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 182,381,758 182,383,378 Zm00001d031266 thx8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 184,358,938 184,359,897 GRMZM2G037493 thx9 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 186,502,389 186,506,512 Zm00001d031391 thx9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 188,647,320 188,650,029 GRMZM2G165747 TIDP3524 Chr1 259,272,477 259,277,810 GRMZM2G073535 TIDP3683 Chr6 156,713,541 156,715,788 Zm00001d038594 TIDP3683 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 160,662,673 160,664,840 GRMZM5G835323 tif1 Classical Gene Chr7 154,305,680 154,308,577 Zm00001d021668 tif1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 159,573,273 159,576,103 GRMZM2G144030 tif5A Classical Gene Chr7 163,041,712 163,045,353 Zm00001d022042 tif5A Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 168,491,796 168,494,907 Zm00001d027652 tip1 Chr1 10,150,836 10,152,891 GRMZM2G168439 tip2 from: AF326500 Chr8 156,113,368 156,114,570 Zm00001d011778 tip2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 161,412,063 161,413,479 GRMZM2G027098 tip2a from Entrez Gene 541894 Chr4 152,458,301 152,459,746 Zm00001d051362 tip2a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 155,984,860 155,986,408 GRMZM2G056908 tip2b from Entrez Gene 541895 Chr5 191,963,084 191,964,288 Zm00001d017485 tip2b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 197,280,407 197,281,892 GRMZM2G305446 tip3a from: AY104541 Chr5 25,531,005 25,532,346 Zm00001d013956 tip3a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 26,132,024 26,133,292 GRMZM2G103983 tip3b from: AF342809 Chr1 228,464,359 228,465,647 Zm00001d032610 tip3b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 232,015,864 232,017,318 GRMZM2G103945 tip4a from: AF326505 Chr6 133,537,405 133,539,720 Zm00001d037779 tip4a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 137,396,807 137,399,127 GRMZM2G108273 tip4b from: AF326506 Chr8 110,236,661 110,239,074 Zm00001d010410 tip4b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 113,391,975 113,394,577 GRMZM2G146627 tip4c from: AF326507 Chr3 13,536,786 13,539,654 Zm00001d039713 tip4c Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 12,824,022 12,826,924 GRMZM2G093090 tip4d from: AF326508 Chr3 1,847,706 1,848,827 Zm00001d039293 tip4d Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 1,167,223 1,168,320 GRMZM2G125023 tip5 from: AF326509 Chr10 139,149,943 139,152,962 Zm00001d026177 tip5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 140,377,176 140,378,531 GRMZM2G033208 tk1 from: EU942796 Chr9 22,790,749 22,795,294 Zm00001d045451 tk1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 22,640,913 22,645,485 Zm00008a009742 tla1 PH207 v1 chr2 214,970,306 214,971,076 GRMZM2G016671 tlk1 Classical Gene Chr1 276,396,791 276,429,710 Zm00001d034018 tlk1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 281,251,739 281,283,764 GRMZM2G172132 tlk2 Classical Gene Chr5 7,231,744 7,248,155 Zm00001d013267 tlk2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 7,487,430 7,504,034 GRMZM2G176209 tls1 from: Leonard, A et al. 2014 Chr1 223,906,865 223,910,808 Zm00001d032461 tls1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 227,449,316 227,453,079 GRMZM2G036564 tm20 Classical Gene Chr6 120,315,469 120,319,622 Zm00001d037386 tm20 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 124,045,008 124,049,689 GRMZM2G147727 tms5 from sequence in Li et al., 2017 Chr4 223,366,764 223,369,176 GRMZM2G159777 toc34 Chr9 144,054,835 144,061,089 Zm00001d047965 toc34 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 146,540,635 146,546,312 GRMZM2G157157 toc35 from: AJ271049 Chr1 32,202,204 32,208,281 Zm00001d028373 toc35 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 32,472,096 32,478,283 AC185226.4_FG001 tola1 from: T15269 (chr hit) Chr4 162,608,157 162,617,862 Zm00001d051644 tola1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 165,589,428 165,612,542 GRMZM2G063306 tom1 Nozoye et al., 2015 Chr3 112,059,631 112,065,432 Zm00001d041111 tom1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 97,974,955 97,982,185 GRMZM2G141081 tom3 Nozoye et al, 2015 Chr2 149,197,052 149,201,004 GRMZM2G305211 tpi1 from: L00371 (chr 7 hit) Chr7 159,951,153 159,960,399 Zm00001d021885 tpi1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 165,356,591 165,357,406 GRMZM2G002807 tpi2 Chr2 196,570,628 196,574,505 Zm00001d006221 tpi2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 202,188,330 202,192,176 GRMZM2G018177 tpi3 from: EU959275 Chr8 14,391,800 14,395,986 Zm00001d008619 tpi3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 14,786,063 14,790,046 GRMZM2G030784 tpi4 From: Entrez Gene 100272481 Chr3 17,832,286 17,836,567 Zm00001d039865 tpi4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 17,163,334 17,167,131 GRMZM2G146206 tpi5 by homology and map location Chr8 168,296,435 168,300,637 Zm00001d012407 tpi5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 173,978,431 173,987,430 GRMZM2G316967 tpl1 Li et al., 2016 Chr3 35,794,787 35,804,261 GRMZM2G030422 tpl2 Li et al., 2016 Chr1 35,244,552 35,255,551 GRMZM2G049538 tps1 from AF529266 Chr2 10,602,719 10,611,664 Zm00001d002351 tps1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 10,715,684 10,724,692 GRMZM2G179092 tps10 from AY928078 Chr10 74,488,739 74,492,309 Zm00001d024486 tps10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 73,708,902 73,712,703 GRMZM2G127087 tps11 from cDNA alignment AY647254 - there are 2 location on B73 v2 assembly, very close to each other (M Schaeffer Aug 2012) Chr10 55,612,816 55,765,958 Zm00001d024210 tps11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 56,611,720 56,614,911 GRMZM2G010356 tps17 Chr2 113,211,755 113,214,535 GRMZM2G046615 tps2 from AY928081 Chr5 71,292,782 71,295,610 Zm00001d015053 tps2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 73,220,250 73,223,078 GRMZM2G127336 tps23 from alignment to cDAN EU259633 on B73_v2 assembly (Aug 2012, M Schaeffer) Chr10 57,658,111 57,664,789 Zm00001d024234 tps23 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 58,548,375 58,557,438 GRMZM2G030583 tps26 aligns to cDNA GenBank accession EF599328 Chr6 107,478,552 107,483,274 Zm00001d037092 tps26 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 111,878,360 111,883,069 GRMZM2G064406 tps3 from NM_001112385 Chr5 71,410,033 71,413,111 Zm00001d015054 tps3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 73,448,283 73,451,482 GRMZM2G117319 tps4 from AY518310 Chr10 74,022,933 74,026,069 Zm00001d024478 tps4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 73,138,059 73,141,408 GRMZM2G074309 tps5 from GenBank AY518311 match Chr10 74,248,611 74,251,874 Zm00001d024481 tps5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 73,442,460 73,446,118 GRMZM2G127087 tps6 from AY518315 Chr10 55,612,816 55,765,958 AC217050.4_FG007 tps7 from AY518316 Chr1 214,936,884 214,943,430 Zm00001d032230 tps7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 218,044,713 218,047,096 GRMZM2G038153 tps8 from AY928080 Chr1 61,014,839 61,021,281 Zm00001d029195 tps8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 61,777,103 61,783,441 GRMZM2G465812 tps9 from AY518317 Chr10 73,850,131 73,851,474 Zm00001d024477 tps9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 72,975,072 72,977,686 GRMZM2G162690 tre1 Zhou et al., 2013 Chr1 80,003,683 80,008,544 Zm00001d029654 tre1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 81,612,748 81,617,458 GRMZM2G424053 trh1 Classical Gene Chr6 157,965,018 157,969,757 Zm00001d038653 trh1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 161,892,150 161,896,354 GRMZM2G144653 trh2 from: AJ890021 Chr7 13,181,810 13,184,354 Zm00001d019034 trh2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 13,647,277 13,649,821 GRMZM2G079089 trh3 from BT042328 Chr3 219,419,739 219,421,147 Zm00001d044247 trh3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 223,001,191 223,001,980 GRMZM2G181258 trm1 Chr10 16,218,811 16,219,788 Zm00001d023707 trm1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 16,408,714 16,409,698 GRMZM2G358009 trm2 Chr3 138,151,050 138,152,140 Zm00001d041804 trm2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 138,831,576 138,832,497 GRMZM2G131202 trm3 from Cell Genomics Project (Oct 2013) Chr2 51,853,125 51,854,807 Zm00001d003667 trm3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 53,266,869 53,273,843 GRMZM2G347280 trpp1 Zhou et al., 2013 Chr1 217,833,921 217,836,445 Zm00001d032298 trpp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 220,971,335 220,973,749 GRMZM2G080354 trpp10 Zhou et al., 2013 Chr9 5,654,774 5,657,748 Zm00001d044854 trpp10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 5,277,549 5,280,537 GRMZM2G178546 trpp11 Zhou et al., 2013 Chr9 117,179,608 117,183,243 Zm00001d047110 trpp11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 118,915,807 118,919,998 GRMZM2G140078 trpp2 Zhou et al., 2013 Chr2 177,921,904 177,924,464 Zm00001d005658 trpp2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 182,513,911 182,516,018 GRMZM2G117564 trpp3 Zhou et al., 2013 Chr2 213,142,636 213,145,421 Zm00001d006913 trpp3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 219,293,809 219,297,189 GRMZM2G151044 trpp4 Zhou et al., 2013 Chr4 180,916,055 180,919,097 Zm00001d052227 trpp4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 183,819,885 183,822,900 GRMZM2G059840 trpp5 Zhou et al., 2013 Chr4 183,294,232 183,295,877 GRMZM2G112830 trpp6 Zhou et al., 2013 Chr5 192,358,347 192,362,866 Zm00001d017502 trpp6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 197,722,483 197,728,745 GRMZM2G055150 trpp7 Zhou et al., 2013 Chr5 208,220,125 208,222,639 Zm00001d018082 trpp7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 213,921,299 213,923,977 GRMZM2G174396 trpp8 Zhou et al., 2013 Chr7 100,351,591 100,353,678 Zm00001d020272 trpp8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 103,496,049 103,498,536 GRMZM5G840145 trpp9 Zhou et al., 2013 Chr7 166,884,741 166,887,809 Zm00001d022192 trpp9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 172,473,928 172,477,009 GRMZM2G068943 trps1 from EU659122 & Zhou et al., 2013 Chr8 123,130,508 123,138,783 Zm00001d010755 trps1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 126,969,528 126,978,127 GRMZM2G312521 trps10 Zhou et al., 2013 Chr4 174,991,784 174,996,304 Zm00001d052060 trps10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 178,019,071 178,023,237 GRMZM2G122231 trps11 Zhou et al., 2013 Chr5 213,103,736 213,107,678 Zm00001d018342 trps11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 218,888,425 218,892,344 GRMZM2G001304 trps12 Zhou et al., 2013 Chr6 159,446,662 159,451,841 Zm00001d038728 trps12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 163,411,334 163,420,782 GRMZM2G019183 trps13 Zhou et al., 2013 Chr7 107,954,189 107,958,866 Zm00001d020396 trps13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 111,240,634 111,244,556 GRMZM2G416836 trps14 Zhou et al., 2013 Chr8 5,488,159 5,500,321 GRMZM2G118462 trps15 Zhou et al., 2013 Chr8 173,973,120 173,978,270 Zm00001d012748 trps15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 179,664,693 179,669,878 GRMZM2G099860 trps2 Zhou et al., 2013 Chr1 28,446,754 28,451,214 Zm00001d028267 trps2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 28,638,545 28,642,886 GRMZM2G079928 trps3 Zhou et al., 2013 Chr1 210,710,797 210,714,526 Zm00001d032118 trps3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 213,709,256 213,712,753 GRMZM2G008226 trps4 Zhou et al., 2013 Chr1 218,618,199 218,623,790 Zm00001d032311 trps4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 221,831,552 221,837,239 GRMZM2G527891 trps5 Zhou et al., 2013 Chr2 178,595,620 178,602,402 Zm00001d005687 trps5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 183,363,790 183,370,827 GRMZM2G304274 trps6 Zhou et al., 2013 Chr3 197,959,792 197,974,963 Zm00001d043468 trps6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 200,986,071 200,997,407 GRMZM2G123277 trps7 Zhou et al., 2013 Chr3 198,017,608 198,022,549 Zm00001d043469 trps7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 201,083,349 201,088,576 GRMZM2G007736 trps8 Zhou et al., 2013 Chr4 61,432,557 61,437,544 Zm00001d050069 trps8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 63,832,557 63,836,587 GRMZM2G366659 trps9 Zhou et al., 2013 Chr4 76,359,450 76,362,880 Zm00001d050293 trps9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 79,156,177 79,162,011 GRMZM2G039867 tru1 Li, W. 2012 Chr3 150,088,574 150,091,550 Zm00001d042111 tru1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 151,328,862 151,332,856 GRMZM2G104843 ts1 Classical Gene Chr2 45,820,737 45,825,105 Zm00001d003533 ts1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 47,105,187 47,109,372 GRMZM2G455809 ts2 Classical Gene Chr1 46,683,464 46,684,885 Zm00001d028806 ts2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 46,955,327 46,956,671 GRMZM5G803935 ts4 Classical Gene Chr3 144,918,011 144,918,720 GRMZM5G862109 ts6 alignment of cDNA AF048900 GI:2944039 to B73_v2 (Jul 2011) Chr1 292,966,682 292,970,925 GRMZM5G862109 ts6 Classical Gene Chr1 292,966,682 292,970,925 Zm00001d034629 ts6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 298,422,859 298,427,050 GRMZM5G841619 tsa1 from alignment to cDNA EU334442 Chr7 10,780,313 10,784,254 Zm00001d018969 tsa1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 11,057,172 11,061,083 GRMZM2G046191 tsah1 from alignment with cDNA AF271384 Chr1 288,331,936 288,337,173 Zm00001d034460 tsah1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 293,615,920 293,621,281 GRMZM2G325850 tsh1 Classical Gene Chr6 166,277,494 166,278,842 Zm00001d039113 tsh1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 170,248,013 170,249,485 GRMZM2G307588 tsh4 based on sequence for spb6 (Clint Whipple, pers comm) Chr7 133,202,776 133,206,423 Zm00001d020941 tsh4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 137,273,600 137,277,139 GRMZM2G056403 tti1 Garcia et al., 2017 Chr5 43,832,034 43,852,685 GRMZM2G370777 tu1 from sequence AJ430633 Chr4 178,918,189 178,925,234 Zm00001d052180 tu1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 181,857,308 181,864,042 GRMZM2G153292 tua1 from sequence EU966592; transcript GRMZM2G153292_T06; T06 transcript corresponds to tua1 identified in sequence X15704, B73_v2 Chr1 271,172,696 271,181,023 GRMZM2G153292 tua2 Transcript GRMZM2G153292_T01; gene model includes both tua1, and tua2 Chr1 271,172,696 271,181,023 Zm00001d033850 tua2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 275,839,810 275,847,427 AC195340.3_FG001 tua3 from: BT054944 Chr5 5,434,731 5,437,116 Zm00001d013159 tua3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 5,560,312 5,563,194 GRMZM2G152466 tua4 Classical Gene Chr5 9,481,738 9,485,476 Zm00001d013367 tua4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 9,834,794 9,838,085 GRMZM2G099167 tua5 Classical Gene Chr2 207,291,939 207,295,620 Zm00001d006651 tua5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 213,473,849 213,477,743 GRMZM2G083243 tua6 Classical Gene Chr7 160,071,867 160,075,599 Zm00001d021891 tua6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 165,505,165 165,508,857 GRMZM2G164696 tub1 from Cell Genomics Project (OCT 2013) Chr1 2,035,661 2,037,950 Zm00001d027295 tub1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 2,104,761 2,106,624 GRMZM2G334899 tub2 Classical Gene Chr8 104,292,707 104,296,183 Zm00001d010275 tub2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 107,054,058 107,056,775 GRMZM2G108766 tub3 Classical Gene Chr1 258,611,047 258,615,106 Zm00001d033457 tub3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 263,191,017 263,194,942 GRMZM2G066191 tub4 Classical Gene Chr5 14,869,913 14,874,139 Zm00001d013612 tub4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 15,364,275 15,368,222 GRMZM2G133802 tub5 from: L10636 Chr3 47,738,975 47,742,300 Zm00001d040509 tub5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 47,520,802 47,522,705 GRMZM2G172932 tub6 from Entrez Gene 100382290 Chr8 170,881,296 170,884,640 Zm00001d012556 tub6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 176,577,453 176,580,718 Zm00001d046996 tub7 Chr9 114,521,702 114,522,844 GRMZM2G071790 tubb6 from: Entrez Gene 542239 Chr3 187,499,362 187,503,653 Zm00001d043158 tubb6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 190,365,000 190,368,453 GRMZM2G073888 tubg1 Chr8 78,798,124 78,804,134 Zm00001d009780 tubg1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 80,730,257 80,736,271 GRMZM2G085970 tubg2 from: X78891 Chr6 126,762,125 126,766,341 Zm00001d037582 tubg2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 130,519,107 130,523,459 GRMZM2G068586 tubtf1 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 149,813,540 149,818,967 Zm00001d011578 tubtf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 154,851,163 154,856,045 GRMZM2G129288 tubtf10 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 150,264,620 150,270,514 Zm00001d038310 tubtf10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 154,166,396 154,172,068 GRMZM2G378907 tubtf11 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 60,094,998 60,103,977 Zm00001d029165 tubtf11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 60,879,438 60,888,390 GRMZM5G871407 tubtf12 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 167,438,145 167,440,601 GRMZM2G349376 tubtf13 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 112,038,910 112,042,465 Zm00001d047019 tubtf13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 115,435,278 115,437,104 GRMZM2G001272 tubtf14 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 8,789,860 8,796,975 Zm00001d023523 tubtf14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 8,711,082 8,725,025 GRMZM2G062154 tubtf15 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 209,720,836 209,725,600 Zm00001d043895 tubtf15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 213,249,521 213,254,004 GRMZM5G866954 tubtf2 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 175,734,269 175,738,021 Zm00001d042724 tubtf2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 178,236,350 178,240,117 GRMZM2G046816 tubtf3 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 214,907,581 214,912,733 Zm00001d053179 tubtf3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 218,421,396 218,425,679 GRMZM2G108228 tubtf4 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 25,431,508 25,435,921 Zm00001d002896 tubtf4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 26,117,809 26,122,010 GRMZM2G435445 tubtf5 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 158,666,528 158,671,070 Zm00001d038691 tubtf5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 162,624,149 162,628,635 GRMZM2G176340 tubtf6 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 160,005,783 160,009,342 Zm00001d051568 tubtf6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 162,975,759 162,979,667 GRMZM2G163726 tubtf7 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 195,960,621 195,964,652 Zm00001d052765 tubtf7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 200,038,358 200,042,350 GRMZM2G472945 tubtf8 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 90,798,763 90,801,363 Zm00001d015485 tubtf8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 93,095,266 93,097,731 GRMZM2G115701 tubtf9 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 200,962,624 200,966,193 Zm00001d017773 tubtf9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 206,380,933 206,384,191 GRMZM2G022269 tufm1 from: Entrez Gene 100273405 Chr1 298,487,571 298,492,926 Zm00001d034856 tufm1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 303,903,433 303,908,535 GRMZM2G051879 uaz248a(his3) Chr1 67,652,509 67,655,143 Zm00001d029394 uaz248a(his3) v4 Chr1 68,805,980 68,808,399 GRMZM2G176358 uaz248b(his3) Chr5 175,696,565 175,700,974 Zm00001d016908 uaz248b(his3) Chr5 179,675,631 179,680,148 Zm00001d031060 uaz276 Chr1 175,163,704 175,169,767 GRMZM2G024823 uaz282 from: EU961905 & Classical Gene; retained with pop1 in 1L Chr1 99,180,327 99,184,416 GRMZM2G160917 ub2 assigned by the Grassius project, (Yilmaz et al 2009), also from AJ011618 and Chuck et al, 2014 Chr1 188,215,376 188,219,483 Zm00001d031451 ub2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 190,382,866 190,386,589 GRMZM2G460544 ub3 assigned by the Grassius project, (Yilmaz et al 2009), from: AJ011620, and Chuck et al., 2014 Chr4 199,456,664 199,460,958 Zm00001d052890 ub3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 203,611,347 203,615,518 GRMZM2G409726 ubi1 from: EU734563 Chr5 82,479,947 82,483,338 Zm00001d015327 ubi1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 84,630,842 84,634,232 GRMZM2G419891 ubi2 Classical Gene Chr4 237,423,191 237,427,552 Zm00001d053838 ubi2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 242,132,524 242,136,885 GRMZM2G014119 ubi3 Ding et al., 2017 Chr6 96,004,229 96,006,495 GRMZM2G156575 ubl1 Li et al., 2016 Chr5 190,738,089 190,739,754 Zm00001d017432 ubl1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 195,844,968 195,847,238 GRMZM2G017845 ubr1 from BT085014 Chr6 52,901,117 52,909,594 GRMZM2G007381 uce1 Chr1 180,039,864 180,044,548 Zm00001d031205 uce1 Chr1 182,002,231 182,006,778 GRMZM2G177276 uce2 Hawkins et al., 2014 Chr9 11,707,996 11,712,257 Zm00001d045049 uce2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 11,145,384 11,149,540 GRMZM2G070047 uce3 from: U49913 Chr1 4,974,957 4,978,299 Zm00001d027427 uce3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 5,095,291 5,098,140 GRMZM2G102471 uce4 Chr2 2,808,177 2,811,018 Zm00001d001913 uce4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 2,799,861 2,803,017 GRMZM2G022859 uce5 Chr1 267,922,012 267,928,571 Zm00001d033744 uce5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 272,666,382 272,672,688 GRMZM2G018447 uce6 Chr3 93,201,404 93,219,385 Zm00001d041216 uce6 Chr3 105,946,908 105,964,472 GRMZM2G053764 uce7 Chr1 236,148,441 236,187,902 Zm00001d032831 uce7 Chr1 239,609,852 239,611,554 GRMZM2G146374 uce8 Chr5 31,667,987 31,671,628 Zm00001d014108 uce8 Chr5 32,771,043 32,774,720 GRMZM2G141009 uck1 Chr6 57,559,271 57,563,575 Zm00001d035916 uck1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 60,137,069 60,138,570 GRMZM5G852877 ucp1 Xu et al., 2017 Chr10 96,336,115 96,339,634 GRMZM2G165629 ucp2 Xu et al., 2017 Chr2 115,499,484 115,509,245 GRMZM2G000510 ucp3 Chr4 32,433 63,643 GRMZM2G040627 udg1 Chr2 2,072,014 2,081,975 Zm00001d001864 udg1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 2,066,590 2,076,640 GRMZM2G149224 ufg43 Chr1 70,163,155 70,171,689 Zm00001d029454 ufg43 Chr1 71,428,751 71,437,172 GRMZM2G175396 ufg50 Chr1 197,293,338 197,296,143 Zm00001d031726 ufg50 Chr1 199,707,996 199,710,074 GRMZM2G040954 ufg77 Chr1 63,356,585 63,364,853 Zm00001d029264 ufg77 Chr1 64,207,240 64,216,522 GRMZM6G729818 ugp1 from: EU959978 & T14797 (chr 2 hit) to v3 Chr2 198,410,457 198,414,756 GRMZM2G032003 ugp2 From: T14797 (chr 7 hit) Chr7 146,528,252 146,535,144 Zm00001d021421 ugp2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 151,705,669 151,712,216 GRMZM2G162755 ugt1 Rius et al., 2016 Chr6 120,058,984 120,060,863 Zm00001d037383 ugt1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 123,804,940 123,806,574 GRMZM2G134903 ugu1 Chr5 34,604,351 34,608,765 Zm00001d014191 ugu1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 35,767,017 35,771,795 GRMZM2G448701 umc1041 Chr1 6,148,853 6,149,887 Zm00001d027477 umc1041 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 6,237,666 6,238,642 GRMZM2G301071 umc106a Chr1 274,775,918 274,780,056 Zm00001d033954 umc106a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 279,578,119 279,582,280 GRMZM2G136831 umc109 Chr9 3,310,246 3,313,061 GRMZM2G414043 umc1103 Chr7 165,539,046 165,547,083 Zm00001d022143 umc1103 Chr7 171,094,069 171,102,469 GRMZM2G163912 umc1111 Chr1 288,808,469 288,813,563 GRMZM2G016210 umc1122 Chr1 201,673,513 201,678,322 Zm00001d031853 umc1122 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 204,145,139 204,149,948 GRMZM5G854901 umc1123 Chr1 188,048,202 188,051,323 GRMZM2G031893 umc1128 Chr1 224,317,806 224,322,949 GRMZM2G438386 umc1147 Chr1 225,170,303 225,174,114 Zm00001d032504 umc1147 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 228,756,797 228,759,565 GRMZM2G105005 umc1149 Chr8 159,840,596 159,842,605 GRMZM2G162814 umc115 Chr1 14,939,938 14,942,616 Zm00001d027851 umc115 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 15,175,214 15,177,892 GRMZM2G137329 umc1177 Chr1 2,993,011 2,993,734 Zm00001d027332 umc1177 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 3,095,308 3,095,604 GRMZM2G127635 umc1200 Chr1 23,109,443 23,111,096 Zm00001d028122 umc1200 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 23,497,185 23,499,077 GRMZM2G061626 umc1220 Chr1 293,231,711 293,232,742 Zm00001d034641 umc1220 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 298,696,773 298,697,294 GRMZM2G056870 umc1222 Chr1 10,989,939 10,997,425 Zm00001d027688 umc1222 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 11,158,115 11,165,247 GRMZM2G085198 umc1243 Chr1 83,531,702 83,533,706 Zm00001d029747 umc1243 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 85,172,704 85,174,464 GRMZM2G113781 umc1245 Chr1 229,874,104 229,877,959 Zm00001d032656 umc1245 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 233,337,054 233,340,892 GRMZM2G087146 umc124a(chk) Chr8 21,151,886 21,155,655 GRMZM2G045135 umc1254 Chr1 196,619,128 196,623,386 Zm00001d031705 umc1254 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 199,015,599 199,019,446 Zm00001d017444 umc126a v4 Chr5 196,011,766 196,014,768 GRMZM2G092595 umc1278 Chr1 215,254,512 215,259,644 Zm00001d032238 umc1278 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 218,358,529 218,366,044 GRMZM2G026780 umc1290 Chr1 270,897,979 270,898,979 Zm00001d033846 umc1290 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 275,610,676 275,610,975 GRMZM2G176604 umc1292 Chr1 5,401,254 5,405,109 GRMZM2G086869 umc1297 Chr1 96,691,231 96,693,175 Zm00001d030009 umc1297 Chr1 98,960,515 98,962,408 GRMZM2G125931 umc130 Chr10 13,559,624 13,562,431 GRMZM2G153476 umc1306 Chr1 265,241,093 265,242,952 Zm00001d033665 umc1306 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 269,986,885 269,988,368 GRMZM2G024933 umc131 from: AY771215 Chr2 71,740,629 71,768,626 GRMZM2G100121 umc1323 Chr1 170,491,369 170,495,919 Zm00001d030990 umc1323 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 172,352,530 172,357,352 GRMZM2G014303 umc132a(chk) Chr6 161,321,890 161,325,363 GRMZM5G874478 umc1331 Chr1 296,282,014 296,284,211 Zm00001d034768 umc1331 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 301,674,705 301,677,768 GRMZM2G477872 umc1335 Chr1 197,104,210 197,113,406 Zm00001d031724 umc1335 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 199,517,587 199,526,569 GRMZM2G112617 umc1356 Chr1 206,507,475 206,509,065 Zm00001d032008 umc1356 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 209,290,032 209,291,244 GRMZM2G119761 umc1374 Chr1 206,554,966 206,558,522 Zm00001d032010 umc1374 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 209,338,030 209,341,591 GRMZM2G052650 umc1386b Chr1 170,866,748 170,871,629 Zm00001d030999 umc1386b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 172,720,285 172,725,171 GRMZM2G329655 umc1395 Chr1 164,572,134 164,574,375 Zm00001d030894 umc1395 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 166,194,776 166,197,012 GRMZM2G005652 umc1396 Chr1 191,123,119 191,128,083 Zm00001d031534 umc1396 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 193,343,064 193,348,037 GRMZM2G160506 umc1397 Chr1 39,115,112 39,118,417 Zm00001d028572 umc1397 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 39,461,169 39,464,573 GRMZM2G108032 umc1403 Chr1 33,126,620 33,130,048 Zm00001d028398 umc1403 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 33,451,482 33,454,805 GRMZM2G108861 umc140a Chr1 258,714,960 258,716,976 Zm00001d033459 umc140a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 263,294,917 263,296,681 GRMZM6G799230 umc1411a scaffold_511 279 2,173 GRMZM2G078200 umc1421 Chr1 287,959,555 287,963,914 Zm00001d034443 umc1421 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 293,098,082 293,102,502 GRMZM2G004012 umc1431 Chr1 267,212,960 267,213,968 Zm00001d033709 umc1431 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 271,942,636 271,943,635 GRMZM2G162508 umc1446 Chr1 240,842,179 240,846,321 Zm00001d032948 umc1446 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 244,409,830 244,413,837 GRMZM2G107463 umc1452 Chr1 53,171,372 53,176,168 Zm00001d028989 umc1452 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 53,771,917 53,776,759 GRMZM5G887068 umc1457 Chr8 101,647,239 101,650,151 AC202185.4_FG004 umc1461 Chr1 122,169,770 122,170,960 Zm00001d030346 umc1461 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 124,047,279 124,048,368 GRMZM2G134367 umc1467 Chr1 20,418,111 20,419,920 Zm00001d028024 umc1467 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 20,740,613 20,741,926 GRMZM2G466982 umc1469 Chr1 115,653,428 115,654,009 Zm00001d030262 umc1469 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 117,245,700 117,246,281 GRMZM2G124576 umc1472 Chr1 59,672,736 59,676,878 Zm00001d029144 umc1472 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 60,427,117 60,431,202 GRMZM2G042032 umc1479 Chr1 43,137,809 43,141,198 Zm00001d028695 umc1479 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 43,355,977 43,359,324 GRMZM2G037865 umc1482 Chr5 171,020,159 171,021,294 GRMZM2G107532 umc1484 Chr1 9,428,005 9,432,250 Zm00001d027630 umc1484 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 9,488,000 9,492,140 GRMZM2G389567 umc1486 Chr1 211,043,052 211,043,783 Zm00001d032132 umc1486 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 214,041,360 214,041,602 GRMZM2G069218 umc1500 Chr1 285,603,499 285,608,445 Zm00001d034360 umc1500 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 290,672,852 290,677,815 GRMZM2G154523 umc1509 Chr4 5,460,337 5,462,342 GRMZM2G004878 umc1511 Chr4 81,276,744 81,278,113 GRMZM5G831951 umc1538a Chr1 291,973,322 291,974,630 Zm00001d034595 umc1538a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 297,417,890 297,419,492 GRMZM2G109429 umc1539 Chr3 168,533,377 168,536,519 GRMZM2G371210 umc1553 Chr1 287,054,286 287,062,461 Zm00001d034410 umc1553 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 292,172,345 292,176,235 GRMZM2G047187 umc1558 Chr1 85,839,688 85,844,369 Zm00001d029803 umc1558 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 87,586,799 87,591,619 GRMZM2G176962 umc1590 Chr1 182,873,055 182,876,103 Zm00001d031279 umc1590 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 184,897,760 184,900,636 GRMZM2G038855 umc1601 Chr1 166,785,190 166,789,349 Zm00001d030940 umc1601 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 168,453,787 168,458,127 GRMZM2G127739 umc1603 Chr1 165,422,830 165,427,702 Zm00001d030916 umc1603 Chr1 167,088,410 167,093,959 GRMZM5G821637 umc1605 Chr1 298,766,998 298,771,703 Zm00001d034865 umc1605 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 304,197,047 304,201,731 GRMZM2G132077 umc1611 Chr1 152,175,789 152,176,887 Zm00001d030698 umc1611 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 154,144,314 154,144,817 GRMZM2G161560 umc1613 Chr1 1,785,557 1,787,537 Zm00001d027288 umc1613 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 1,841,722 1,843,589 GRMZM2G472827 umc161a Chr1 283,258,252 283,262,785 Zm00001d034263 umc161a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 288,275,261 288,289,725 GRMZM5G801886 umc1626 withdrawn by NCBI Chr1 157,148,809 157,149,892 GRMZM2G156857 umc1627 from: BT056224 Chr8 78,520,915 78,522,102 Zm00001d009772 umc1627 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 80,442,196 80,442,981 GRMZM2G064031 umc1641 Chr3 227,133,973 227,141,739 GRMZM2G083725 umc1664 Chr1 194,690,089 194,692,196 Zm00001d031636 umc1664 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 197,046,358 197,048,201 GRMZM2G135341 umc168 Chr7 174,404,316 174,410,512 GRMZM2G159996 umc1709 Chr1 195,590,031 195,594,661 Zm00001d031662 umc1709 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 197,918,030 197,921,539 GRMZM2G008687 umc1710 Chr7 156,539,630 156,543,248 GRMZM2G107815 umc1711 Chr1 25,409,169 25,413,691 Zm00001d028187 umc1711 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 25,755,280 25,759,748 GRMZM2G171559 umc1715 LOC100383109 GRMZM2G171559 LOC100276185 -- Chr1 226,296,202 226,296,963 Zm00001d032533 umc1715 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 229,829,797 229,830,137 GRMZM2G114667 umc1734 Chr1 92,254,266 92,255,946 Zm00001d029918 umc1734 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 94,336,239 94,343,520 GRMZM2G082312 umc1737 Chr1 290,377,065 290,381,073 Zm00001d034533 umc1737 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 295,778,554 295,782,540 GRMZM2G073155 umc1744 In v3 browser. Not in v4 browser or NCBI Gene Chr1 292,873,373 292,873,972 GRMZM2G386209 umc1748 Chr1 191,892,986 191,895,008 Zm00001d031555 umc1748 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 194,120,554 194,122,562 GRMZM2G125304 umc1790a Chr1 82,498,393 82,505,931 Zm00001d029722 umc1790a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 84,139,123 84,145,156 GRMZM2G057283 umc17a Chr3 205,369,890 205,371,486 AC187262.4_FG007 umc1811 Chr1 184,732,930 184,733,551 Zm00001d031344 umc1811 Chr1 186,836,238 186,837,506 GRMZM2G169451 umc1812 Chr1 180,743,250 180,744,404 Zm00001d031227 umc1812 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 182,704,313 182,705,449 GRMZM2G069618 umc1849 Chr1 56,894,719 56,897,083 Zm00001d029093 umc1849 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 57,594,777 57,598,573 GRMZM2G041050 umc1906 Chr1 162,601,608 162,610,432 Zm00001d030868 umc1906 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 164,196,407 164,205,410 AC213099.3_FG001 umc1917 Chr1 62,921,411 62,922,558 Zm00001d029249 umc1917 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 63,744,994 63,752,712 GRMZM2G329909 umc1919a Chr1 191,885,470 191,889,519 GRMZM5G896294 umc1919a Chr1 191,891,265 191,892,243 Zm00001d031554 umc1919a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 194,112,919 194,119,847 GRMZM2G057173 umc1924 Chr1 240,012,334 240,013,819 Zm00001d032929 umc1924 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 243,530,719 243,532,173 GRMZM2G172758 umc1948 Chr1 8,531,138 8,532,984 GRMZM2G067315 umc1955 Chr1 235,968,685 235,970,191 Zm00001d032825 umc1955 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 239,383,321 239,384,004 GRMZM2G162535 umc1976 Chr1 21,567,145 21,568,044 Zm00001d028064 umc1976 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 21,883,821 21,884,689 GRMZM5G842695 umc1991 Chr1 245,369,017 245,372,021 Zm00001d033062 umc1991 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 249,131,104 249,134,119 GRMZM2G369130 umc2047 Chr1 258,442,739 258,446,721 Zm00001d033451 umc2047 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 263,011,439 263,016,268 GRMZM2G174170 umc21 Chr6 121,033,833 121,040,632 GRMZM2G083551 umc2151 Chr1 194,693,263 194,696,454 Zm00001d031637 umc2151 Chr1 197,049,256 197,052,349 GRMZM2G008290 umc2181 Chr1 237,715,096 237,717,332 Zm00001d032873 umc2181 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 241,076,121 241,077,989 GRMZM2G401331 umc2189 Chr1 271,379,568 271,381,337 Zm00001d033857 umc2189 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 276,045,738 276,047,507 GRMZM2G076062 umc2224 Chr1 12,162,857 12,167,581 Zm00001d027731 umc2224 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 12,354,762 12,359,640 GRMZM2G110847 umc2226 Chr1 21,780,575 21,788,092 GRMZM2G114055 umc2226 Chr1 21,756,543 21,775,704 Zm00001d028075 umc2226 v4 Chr1 22,053,545 22,070,105 GRMZM2G412430 umc2227 Not joined with LOC100275478 in NCBI/Gene but is in MaizeGDB v4 browser (EHC June 15 2017) Chr1 67,856,797 67,858,961 Zm00001d029402 umc2227 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 69,015,049 69,017,291 GRMZM2G125241 umc2228 Chr1 73,974,267 73,976,401 Zm00001d029539 umc2228 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 75,377,980 75,379,495 GRMZM2G093962 umc2229 Chr1 80,329,646 80,332,141 Zm00001d029667 umc2229 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 81,894,379 81,896,612 GRMZM2G070271 umc2230 Chr1 103,272,931 103,324,927 GRMZM2G017170 umc2231 Chr1 156,233,140 156,235,984 GRMZM5G836886 umc2232 Chr1 164,519,562 164,522,656 GRMZM5G878058 umc2232 Chr1 164,522,853 164,525,776 Zm00001d030893 umc2232 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 166,141,957 166,148,221 GRMZM2G428216 umc2233 Chr1 165,420,890 165,421,476 Zm00001d030915 umc2233 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 167,087,181 167,087,501 GRMZM2G441903 umc2234 Chr1 187,432,434 187,434,251 Zm00001d031423 umc2234 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 189,593,205 189,593,937 GRMZM2G074270 umc2235 Chr1 191,475,413 191,478,860 Zm00001d031539 umc2235 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 193,693,869 193,697,232 GRMZM2G017110 umc2236 from alignment to BT085675 Chr1 198,263,544 198,267,076 GRMZM2G133413 umc2237 Chr1 200,759,099 200,762,378 Zm00001d031837 umc2237 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 203,221,978 203,225,256 GRMZM2G053299 umc2243 Chr1 296,102,632 296,106,489 GRMZM5G876146 umc2244 Chr1 298,813,792 298,816,795 GRMZM2G154151 umc2510 Chr1 259,270,084 259,272,370 GRMZM2G019916 umc254 Chr7 156,050,388 156,051,083 GRMZM2G452717 umc255a Chr2 153,139,055 153,143,121 AC233888.1_FG001 umc259a Chr10 127,957,386 127,959,778 GRMZM2G113196 umc2621 Chr1 183,809,704 183,811,177 Zm00001d031311 umc2621 Chr1 185,849,377 185,850,081 GRMZM2G123519 umc32a Chr3 1,726,094 1,729,468 GRMZM2G116542 umc44a Chr10 137,339,524 137,341,097 GRMZM5G836567 umc44a Chr10 137,311,826 137,319,567 GRMZM2G134930 umc59a Chr6 86,045,720 86,048,771 GRMZM2G060721 umc64a Chr10 85,759,150 85,760,465 GRMZM2G090747 umc7 Chr8 171,085,827 171,089,416 Zm00001d012567 umc7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 176,775,799 176,779,233 GRMZM2G001812 umc83a Chr1 233,516,803 233,520,836 GRMZM2G019225 umc85a Chr6 8,272,015 8,277,539 GRMZM2G093776 umc86a Chr1 293,531,158 293,535,465 GRMZM5G880028 umc95 Chr9 127,192,292 127,194,925 GRMZM2G450866 umi11 from: AY679129 Chr7 3,889,069 3,891,403 Zm00001d018748 umi11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 4,078,618 4,082,285 GRMZM2G149923 umi12 from: AY679130 Chr1 275,154,534 275,157,007 Zm00001d033980 umi12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 279,980,867 279,981,749 GRMZM2G330302 umi8 from: AY679128. Chr3 213,469,252 213,473,397 Zm00001d044024 umi8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 217,057,372 217,063,766 GRMZM2G121456 v30 from Arabidopsis clpp1 AB022326 & maize EU967773 Chr9 135,397,438 135,401,073 Zm00001d047634 v30 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 137,661,761 137,664,763 GRMZM2G067546 vacs1 Classical Gene Chr9 131,423,638 131,431,860 Zm00001d047522 vacs1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 133,460,977 133,469,214 GRMZM2G150616 vdac1a from: EU970195 Chr2 177,290,831 177,294,514 Zm00001d005649 vdac1a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 181,908,131 181,911,665 GRMZM2G146670 vdac1b from: AF178951 Chr7 97,642,539 97,646,675 Zm00001d020219 vdac1b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 100,656,060 100,660,194 GRMZM2G115049 vdac2 from: EU962130 Chr6 161,642,062 161,645,447 Zm00001d038840 vdac2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 165,624,432 165,627,829 GRMZM2G027219 vde1 Based on homology to Genbank sequence. Chr2 74,716,207 74,718,993 Zm00001d004021 vde1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 76,077,655 76,080,443 GRMZM2G701673 vde2 Xu et al, 2016 Chr10 106,812,274 106,812,762 GRMZM2G408706 vde3 Xu et al, 2016 Chr8 154,564,180 154,569,605 GRMZM2G415538 vdl1 Chr8 156,348,546 156,364,515 GRMZM2G339151 vim102 Li et al., 2014 Chr8 134,742,942 134,746,904 Zm00001d011108 vim102 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 139,153,111 139,157,427 GRMZM2G461447 vim103 Li et al., 2014 Chr6 44,751,886 44,756,124 Zm00001d035764 vim103 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 46,349,538 46,353,764 AC191534.3_FG003 vim104 Li et al., 2014 Chr7 27,685,032 27,687,705 Zm00001d019342 vim104 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 28,745,288 28,767,439 GRMZM2G111696 voz1 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 159,112,392 159,115,898 Zm00001d038704 voz1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 163,076,771 163,080,204 GRMZM2G158717 voz2 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 216,402,429 216,405,935 GRMZM2G094081 voz3 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 98,456,978 98,457,972 Zm00001d041158 voz3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 100,617,229 100,618,272 GRMZM2G156016 voz4 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 198,983,586 198,990,186 Zm00001d043500 voz4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 201,984,577 201,991,160 GRMZM2G449165 voz5 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 173,825,142 173,828,292 Zm00001d012734 voz5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 179,510,785 179,513,781 GRMZM2G133398 vp1 Classical Gene Chr3 162,842,569 162,847,653 Zm00001d042396 vp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 164,461,221 164,466,141 GRMZM2G067176 vp10 Classical Gene Chr10 146,104,115 146,108,434 Zm00001d026515 vp10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 147,456,386 147,460,691 GRMZM2G014392 vp14 Classical Gene Chr1 250,953,388 250,956,063 GRMZM2G014392 vp14 from alignment of cDNA sequence on Genome Browser v2 (MS 5/2011) Chr1 250,953,388 250,956,063 Zm00001d033222 vp14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 255,021,507 255,023,321 GRMZM2G121468 vp15 Classical Gene Chr5 174,261,710 174,266,807 Zm00001d016850 vp15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 178,308,318 178,313,353 GRMZM2G410515 vp5 Classical Gene Chr1 17,660,122 17,666,235 GRMZM2G410515 vp5 Chr1 17,660,122 17,666,235 Zm00001d027936 vp5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 17,962,828 17,975,699 GRMZM2G010353 vp8 Classical Gene Chr1 286,390,345 286,398,537 Zm00001d034383 vp8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 291,472,441 291,480,873 GRMZM2G454952 vp9 Chen et al., 2017 Chr7 17,481,578 17,490,013 Zm00001d019124 vp9 Chr7 18,102,825 18,113,402 GRMZM2G463291 vpe1 Chr5 189,856,260 189,862,512 Zm00001d017399 vpe1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 194,914,731 194,921,330 GRMZM2G014240 vpp1 Classical Gene Chr9 14,328,479 14,333,699 Zm00001d045139 vpp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 14,008,964 14,014,626 GRMZM2G094497 vpp2 from T18416 Chr9 79,417,971 79,429,946 Zm00001d046336 vpp2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 81,443,409 81,455,307 GRMZM2G421857 vpp3 from: U36436 Chr4 235,983,602 235,992,984 Zm00001d053765 vpp3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 240,696,980 240,703,366 GRMZM2G028432 vpp4 from: EU953141 Chr10 9,542,117 9,544,172 Zm00001d023542 vpp4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 9,508,219 9,510,847 GRMZM2G170927 vpp5 Wang et al., 2016 Chr9 95,183,056 95,188,412 GRMZM2G023858 vps1 Chr5 8,007,214 8,021,382 Zm00001d013314 vps1 Chr5 8,362,786 8,378,035 GRMZM2G179658 vps2 Chr5 213,795,955 213,800,058 GRMZM2G179662 vps2 Chr5 213,805,700 213,814,223 Zm00001d018382 vps2 Chr5 219,599,116 219,617,445 GRMZM2G140737 vpsh26 Chr10 17,837,806 17,842,618 GRMZM2G127308 vt2 aligns to sequence BK007972 (MLS 2012 MGDB BLAST) Chr8 16,853,232 16,857,380 Zm00001d008700 vt2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 17,394,723 17,398,865 GRMZM2G035213 vte4 from Lipka et al 2013 Chr5 200,419,844 200,423,666 Zm00001d017746 vte4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 205,825,586 205,829,216 GRMZM2G480171 w2 Udy et. al., 2012 Chr10 144,030,003 144,038,674 Zm00001d026402 w2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 145,302,797 145,311,603 GRMZM2G110242 wab1 from JX122765 and Bai et al., 2012. Also, tcptf3 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 180,630,151 180,631,609 Zm00001d005737 wab1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 185,422,359 185,423,189 GRMZM2G057243 wc1 Classical Gene Chr9 152,353,213 152,359,196 Zm00001d048373 wc1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 155,236,300 155,242,285 GRMZM5G878541 wee1 Chr4 239,984,257 239,988,267 GRMZM2G012262 whirly2 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 237,573,503 237,579,217 Zm00001d053855 whirly2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 242,281,659 242,285,564 GRMZM2G151227 whp1 Classical Gene Chr2 224,558,005 224,561,990 Zm00001d007403 whp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 230,953,342 230,957,070 GRMZM2G155662 why1 Classical Gene Chr6 71,779,327 71,782,388 GRMZM2G155662 why1 from B73_v2 alignment to cDNA EU595664.1 GI:183229933 (Jul 2011) Chr6 71,779,327 71,782,388 Zm00001d036148 why1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 74,547,569 74,550,576 GRMZM2G156632 wip1 Classical Gene Chr8 12,275,985 12,276,693 Zm00001d008548 wip1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 12,671,727 12,672,398 GRMZM2G112795 wip2 from: T15276 Chr4 20,529,042 20,532,586 GRMZM2G162481 wox11 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 133,354,525 133,358,466 Zm00001d047559 wox11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 135,498,629 135,502,493 Zm00001d022524 wox12a v4 Chr7 179,332,232 179,334,819 GRMZM2G069274 wox13a assigned by the Grassius project, (Yilmaz et al 2009) Chr3 185,489,797 185,493,650 GRMZM5G805026 wox13b assigned by the Grassius project, (Yilmaz et al 2009) Chr8 170,258,101 170,261,292 Zm00001d012516 wox13b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 175,931,640 175,934,827 GRMZM2G108933 wox2a assigned by the Grassius project, (Yilmaz et al 2009) Chr3 181,120,106 181,123,399 Zm00001d042920 wox2a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 183,963,175 183,966,180 GRMZM2G339751 wox2b assigned by the Grassius project, (Yilmaz et al 2009) Chr8 168,495,729 168,496,249 Zm00001d012419 wox2b Chr8 174,174,647 174,177,720 GRMZM2G122537 wox3a assigned by the Grassius project, (Yilmaz et al 2009) Chr6 30,106,417 30,108,536 Zm00001d035535 wox3a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 31,587,838 31,589,288 GRMZM2G140083 wox3b assigned by the Grassius project, (Yilmaz et al 2009) Chr8 131,860,635 131,861,792 Zm00001d010998 wox3b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 136,302,778 136,306,209 GRMZM6G260565 wox4 from: EU964275 Chr10 144,893,352 144,894,218 Zm00001d026453 wox4 Chr10 146,111,095 146,112,832 GRMZM2G478396 wox5a assigned by the Grassius project, (Yilmaz et al 2009) Chr8 166,836,265 166,837,239 Zm00001d012330 wox5a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 172,530,595 172,531,302 GRMZM2G116063 wox5b assigned by the Grassius project, (Yilmaz et al 2009) Chr3 178,369,720 178,371,133 Zm00001d042821 wox5b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 181,141,636 181,142,810 GRMZM2G133972 wox9a from: AM490240 & assigned to hb50 by the Grassius project, (Yilmaz Chr8 148,836,644 148,840,404 Zm00001d011537 wox9a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 153,797,627 153,801,345 GRMZM2G031882 wox9b from: AM234772 & assigned to hb85 by the Grassius project, (Yilmaz et al 2009) Chr3 210,664,178 210,668,618 Zm00001d043937 wox9b Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 214,207,527 214,211,612 GRMZM2G409881 wox9c from: AM490242 & hb117 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 164,845,767 164,849,983 Zm00001d039017 wox9c Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 168,767,482 168,771,320 GRMZM2G124524 wri1 from Pouvreau at al 2011 Chr2 149,971,656 149,977,527 Zm00001d005016 wri1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 153,920,645 153,926,320 GRMZM2G174834 wri2 from Pouvreau et al 2011 Chr4 185,907,968 185,912,697 Zm00001d052405 wri2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 189,190,071 189,194,808 GRMZM2G398506 wrky1 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 161,329,465 161,340,038 Zm00001d021947 wrky1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 166,771,846 166,782,537 GRMZM2G083717 wrky10 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 299,362,324 299,367,903 Zm00001d034888 wrky10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 304,812,196 304,817,687 GRMZM2G401521 wrky100 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 160,019,664 160,021,008 Zm00001d038761 wrky100 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 163,995,859 163,996,996 GRMZM2G123387 wrky101 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 22,124,688 22,129,615 Zm00001d002794 wrky101 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 22,815,199 22,820,094 GRMZM2G070211 wrky102 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 253,562,148 253,565,268 GRMZM2G141299 wrky103 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 198,284,414 198,286,315 Zm00001d043474 wrky103 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 201,316,331 201,317,960 GRMZM2G169149 wrky104 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 115,576,479 115,577,711 Zm00001d020495 wrky104 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 118,963,352 118,964,584 GRMZM2G102583 wrky105 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 79,911,960 79,914,453 Zm00001d004086 wrky105 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 81,414,319 81,415,921 GRMZM2G063880 wrky106 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 71,900,055 71,901,434 Zm00001d009619 wrky106 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 73,563,517 73,564,793 GRMZM2G018487 wrky107 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 274,947,476 274,951,614 Zm00001d033965 wrky107 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 279,763,671 279,766,570 GRMZM2G106560 wrky108 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 222,422,824 222,427,359 Zm00001d007329 wrky108 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 228,732,533 228,737,268 GRMZM5G880069 wrky109 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 17,336,230 17,338,997 GRMZM2G138683 wrky11 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 158,888,697 158,893,034 Zm00001d051550 wrky11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 162,305,826 162,310,127 GRMZM2G173680 wrky110 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 116,043,878 116,046,928 Zm00001d041397 wrky110 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 116,329,475 116,332,435 GRMZM2G013391 wrky111 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 173,930,578 173,932,078 Zm00001d012746 wrky111 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 179,620,170 179,621,660 AC208110.2_FG001 wrky112 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 140,081,545 140,084,417 Zm00001d026218 wrky112 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 141,366,825 141,369,972 GRMZM2G147880 wrky113 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 7,879,528 7,883,985 Zm00001d013307 wrky113 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 8,180,118 8,184,577 AC209050.3_FG003 wrky114 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 96,492,394 96,493,954 Zm00001d036726 wrky114 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 99,175,591 99,177,057 GRMZM2G036703 wrky115 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 169,646,298 169,648,807 Zm00001d012482 wrky115 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 175,328,253 175,331,243 GRMZM2G130854 wrky116 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 208,504,961 208,511,327 Zm00001d006702 wrky116 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 214,685,549 214,691,851 GRMZM2G453571 wrky117 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 164,999,993 165,002,960 Zm00001d039032 wrky117 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 168,945,257 168,948,458 GRMZM2G003551 wrky118 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 18,108,182 18,111,635 Zm00001d045283 wrky118 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 17,935,946 17,939,379 GRMZM2G015433 wrky119 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 124,481,009 124,482,168 Zm00001d010805 wrky119 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 128,361,517 128,362,582 GRMZM2G164082 wrky12 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 288,766,734 288,768,763 Zm00001d034475 wrky12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 294,012,381 294,013,358 AC165171.2_FG002 wrky120 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 144,777,899 144,779,302 Zm00001d041958 wrky120 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 145,661,117 145,663,100 GRMZM2G061408 wrky121 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 109,092,838 109,094,506 GRMZM2G549512 wrky122 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 58,356,325 58,374,672 Zm00001d050023 wrky122 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 60,696,494 60,714,980 GRMZM2G105140 wrky123 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 217,543,229 217,545,089 Zm00001d044171 wrky123 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 221,069,092 221,071,008 GRMZM2G111711 wrky124 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 104,082,393 104,083,964 Zm00001d046805 wrky124 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 106,603,130 106,604,806 GRMZM2G163054 wrky125 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 127,773,579 127,775,131 Zm00001d037607 wrky125 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 131,561,417 131,562,772 GRMZM2G156529 wrky13 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 110,609,946 110,610,865 Zm00001d037054 wrky13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 110,670,329 110,671,228 GRMZM2G091331 wrky14 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 140,695,930 140,697,533 Zm00001d026252 wrky14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 142,052,895 142,054,459 GRMZM2G004060 wrky15 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 12,108,516 12,110,234 Zm00001d023615 wrky15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 12,201,891 12,203,553 GRMZM2G063216 wrky16 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 184,812,978 184,816,591 Zm00001d052357 wrky16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 188,104,225 188,107,989 GRMZM2G381378 wrky17 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 173,263,217 173,265,322 Zm00001d022437 wrky17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 177,695,470 177,698,120 GRMZM2G092694 wrky18 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 653,032 655,605 GRMZM2G382350 wrky19 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 185,085,984 185,090,499 Zm00001d043066 wrky19 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 188,050,986 188,055,909 GRMZM2G048450 wrky2 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 138,386,996 138,389,124 Zm00001d016052 wrky2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 141,693,514 141,695,426 GRMZM2G414315 wrky20 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 74,420,546 74,421,859 Zm00001d009698 wrky20 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 76,319,744 76,321,343 GRMZM2G127064 wrky21 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 135,889,651 135,892,588 Zm00001d037854 wrky21 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 139,821,260 139,824,197 GRMZM2G111354 wrky22 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 175,251,100 175,252,414 Zm00001d012789 wrky22 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 181,008,342 181,010,034 GRMZM2G400559 wrky23 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 152,320,522 152,321,739 GRMZM2G099593 wrky24 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 152,369,498 152,370,911 Zm00001d005057 wrky24 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 156,441,979 156,443,513 GRMZM2G324999 wrky25 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 216,633,236 216,634,880 Zm00001d032265 wrky25 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 219,763,429 219,764,430 GRMZM2G083350 wrky26 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 19,856,200 19,858,470 Zm00001d008794 wrky26 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 20,545,295 20,547,560 GRMZM2G475984 wrky27 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 8,214,258 8,215,483 Zm00001d039531 wrky27 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 7,394,664 7,395,768 GRMZM2G145554 wrky28 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 145,062,095 145,064,464 Zm00001d011413 wrky28 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 149,844,919 149,847,262 GRMZM2G040298 wrky29 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 201,085,602 201,087,238 Zm00001d043569 wrky29 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 204,199,572 204,201,279 GRMZM2G130374 wrky3 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 167,915,436 167,917,645 Zm00001d030969 wrky3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 169,641,684 169,643,906 GRMZM2G143204 wrky30 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 278,228,862 278,232,499 Zm00001d034073 wrky30 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 283,193,730 283,197,425 GRMZM2G008029 wrky31 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 278,669,130 278,671,406 Zm00001d034084 wrky31 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 283,648,741 283,651,017 GRMZM2G030272 wrky32 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 52,917,450 52,918,870 Zm00001d028962 wrky32 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 53,030,837 53,032,126 GRMZM2G020254 wrky33 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 65,429,005 65,430,793 Zm00001d024323 wrky33 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 64,612,739 64,613,831 GRMZM2G057116 wrky34 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 88,471,371 88,472,763 Zm00001d009939 wrky34 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 90,768,544 90,769,854 GRMZM2G029292 wrky35 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 169,910,906 169,937,945 Zm00001d012508 wrky35 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 175,600,736 175,603,784 GRMZM2G054125 wrky36 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 17,875,436 17,878,321 Zm00001d049173 wrky36 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 19,025,176 19,028,095 GRMZM2G139815 wrky37 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 92,417,479 92,419,510 Zm00001d020136 wrky37 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 95,252,065 95,254,096 GRMZM2G163418 wrky38 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 176,398,481 176,400,987 Zm00001d005622 wrky38 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 180,965,628 180,967,221 AC193630.3_FG003 wrky39 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 19,940,858 19,942,697 Zm00001d045375 wrky39 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 20,006,174 20,007,083 GRMZM2G501775 wrky4 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 231,953,985 231,957,372 Zm00001d044682 wrky4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 234,788,638 234,791,964 GRMZM2G158328 wrky40 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 184,905,732 184,908,623 Zm00001d043062 wrky40 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 187,858,083 187,861,043 GRMZM2G065290 wrky41 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 184,988,151 184,997,449 Zm00001d043063 wrky41 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 187,943,172 187,952,706 GRMZM5G812272 wrky42 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 148,612,740 148,615,433 Zm00001d011527 wrky42 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 153,565,171 153,568,905 GRMZM2G148087 wrky43 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 183,944,439 183,947,443 Zm00001d043025 wrky43 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 186,840,855 186,843,842 GRMZM2G432583 wrky44 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 118,562,818 118,564,187 Zm00001d010617 wrky44 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 122,038,132 122,039,596 GRMZM2G151444 wrky45 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 9,237,045 9,244,979 Zm00001d039584 wrky45 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 8,455,756 8,463,632 GRMZM5G823157 wrky46 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 199,697,223 199,700,885 Zm00001d017712 wrky46 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 204,965,594 204,969,901 GRMZM2G149683 wrky47 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 144,765,374 144,766,804 Zm00001d011403 wrky47 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 149,539,154 149,540,733 GRMZM2G120320 wrky48 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 92,841,738 92,843,574 Zm00001d015515 wrky48 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 95,183,890 95,185,688 GRMZM2G006497 wrky49 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 13,139,079 13,140,882 Zm00001d008578 wrky49 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 13,459,466 13,460,938 AC194362.3_FG003 wrky5 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 232,080,384 232,081,786 Zm00001d044680 wrky5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 234,675,094 234,677,643 GRMZM2G071907 wrky50 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 11,760,940 11,762,535 Zm00001d002405 wrky50 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 12,046,655 12,047,909 GRMZM2G366795 wrky51 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 165,221,558 165,224,020 Zm00001d039044 wrky51 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 169,167,038 169,169,532 GRMZM2G151407 wrky52 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 131,319,563 131,323,434 Zm00001d020881 wrky52 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 135,317,302 135,321,287 GRMZM2G125653 wrky53 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 115,336,589 115,338,419 Zm00001d020492 wrky53 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 118,720,426 118,722,244 GRMZM2G178671 wrky54 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 180,652,901 180,653,592 GRMZM2G057011 wrky55 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 181,270,963 181,272,226 Zm00001d005749 wrky55 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 186,040,975 186,042,528 GRMZM2G176489 wrky56 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 8,219,105 8,221,465 Zm00001d039532 wrky56 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 7,399,394 7,401,753 GRMZM2G169966 wrky57 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 153,458,471 153,461,535 Zm00001d038451 wrky57 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 157,439,807 157,442,874 GRMZM2G076657 wrky58 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 134,942,701 134,950,706 Zm00001d041740 wrky58 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 135,595,517 135,603,519 GRMZM2G031963 wrky59 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 124,679,542 124,684,591 Zm00001d025669 wrky59 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 125,756,452 125,761,608 GRMZM2G161411 wrky6 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 15,337,856 15,339,461 Zm00001d013630 wrky6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 15,863,794 15,865,837 GRMZM2G383594 wrky60 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 105,958,946 105,960,357 Zm00001d030139 wrky60 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 108,483,337 108,484,748 GRMZM2G171428 wrky61 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 124,488,682 124,495,259 Zm00001d047309 wrky61 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 126,274,526 126,281,014 GRMZM2G143765 wrky62 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 22,907,413 22,912,048 Zm00001d035323 wrky62 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 21,265,695 21,270,357 GRMZM2G005207 wrky63 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 3,995,050 3,997,307 Zm00001d023332 wrky63 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 3,599,571 3,601,619 AC198725.4_FG009 wrky64 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 217,293,881 217,296,220 Zm00001d044162 wrky64 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 220,824,499 220,827,409 GRMZM2G060918 wrky65 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 133,947,951 133,949,483 GRMZM2G045560 wrky66 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 168,374,785 168,379,461 GRMZM2G090594 wrky67 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 68,737,989 68,739,253 Zm00001d024376 wrky67 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 67,963,922 67,964,857 GRMZM2G137802 wrky68 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 135,574,148 135,576,504 Zm00001d011133 wrky68 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 140,010,389 140,011,159 GRMZM2G448605 wrky69 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 70,575,003 70,578,661 Zm00001d009595 wrky69 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 72,169,414 72,173,597 GRMZM2G354384 wrky7 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 221,361,951 221,362,634 GRMZM2G024898 wrky70 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 12,806,751 12,811,093 Zm00001d002452 wrky70 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 13,068,292 13,071,803 GRMZM2G052671 wrky71 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 189,959,952 189,963,986 Zm00001d006001 wrky71 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 195,047,188 195,051,225 GRMZM5G816457 wrky72 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 39,388,778 39,394,181 Zm00001d003331 wrky72 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 40,361,661 40,367,040 GRMZM2G101405 wrky73 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 203,155,290 203,156,282 Zm00001d043663 wrky73 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 206,352,165 206,353,102 GRMZM2G408462 wrky74 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 212,821,185 212,822,609 Zm00001d044010 wrky74 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 216,438,639 216,439,909 GRMZM2G425430 wrky75 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 75,177,786 75,179,016 Zm00001d029564 wrky75 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 76,584,638 76,589,606 GRMZM2G451035 wrky76 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 184,834,748 184,835,856 Zm00001d052358 wrky76 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 188,123,494 188,124,602 GRMZM2G461648 wrky77 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 184,849,931 184,851,199 Zm00001d052355 wrky77 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 188,043,994 188,045,262 GRMZM2G073272 wrky78 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 159,271,175 159,272,391 Zm00001d016457 wrky78 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 162,995,367 162,996,627 GRMZM2G025895 wrky79 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 93,189,728 93,191,396 Zm00001d020137 wrky79 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 95,348,911 95,350,784 GRMZM2G038158 wrky8 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 224,059,974 224,061,852 Zm00001d053369 wrky8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 227,812,359 227,814,181 GRMZM2G516301 wrky80 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 19,839,384 19,840,388 Zm00001d008793 wrky80 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 20,528,476 20,529,755 GRMZM2G059562 wrky81 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 184,872,991 184,874,285 Zm00001d043060 wrky81 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 187,829,245 187,830,523 GRMZM5G863420 wrky82 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 161,673,003 161,674,439 Zm00001d038843 wrky82 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 165,655,159 165,656,827 GRMZM2G012724 wrky83 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 141,604,322 141,606,522 Zm00001d038023 wrky83 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 145,529,821 145,531,626 GRMZM2G304573 wrky84 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 139,485,939 139,486,968 Zm00001d011237 wrky84 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 144,154,120 144,155,223 GRMZM2G018721 wrky85 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 1,923,485 1,924,841 Zm00001d018656 wrky85 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 2,050,308 2,051,829 GRMZM2G411766 wrky86 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 147,544,923 147,546,743 Zm00001d011496 wrky86 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 152,419,720 152,421,768 GRMZM2G027972 wrky87 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 198,308,636 198,311,250 Zm00001d052847 wrky87 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 202,445,149 202,447,772 GRMZM2G029282 wrky88 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 169,904,229 169,907,044 Zm00001d012507 wrky88 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 175,594,122 175,596,874 GRMZM2G034421 wrky89 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 118,496,550 118,498,937 Zm00001d010616 wrky89 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 121,973,116 121,975,989 GRMZM2G169564 wrky9 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 184,955,171 184,956,823 Zm00001d005056 wrky9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 156,393,219 156,394,669 GRMZM2G468056 wrky90 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 169,887,391 169,888,449 Zm00001d012505 wrky90 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 175,577,410 175,578,506 GRMZM2G441031 wrky91 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 4,035,458 4,036,997 Zm00001d023336 wrky91 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 3,631,087 3,632,656 GRMZM2G449681 wrky92 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 109,740,015 109,742,387 Zm00001d010399 wrky92 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 112,882,140 112,884,372 GRMZM5G871347 wrky93 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 1,260,777 1,262,611 Zm00001d039245 wrky93 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 474,649 476,986 GRMZM2G148561 wrky94 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 69,945,001 69,946,217 Zm00001d050195 wrky94 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 72,636,377 72,637,297 GRMZM2G151763 wrky95 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 211,059,226 211,062,376 Zm00001d043950 wrky95 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 214,609,031 214,612,175 GRMZM2G149219 wrky96 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 259,014,756 259,016,110 Zm00001d033471 wrky96 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 263,620,528 263,621,882 AC205562.3_FG002 wrky97 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 73,393,297 73,394,259 Zm00001d050247 wrky97 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 76,138,362 76,139,324 GRMZM2G377217 wrky98 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 151,097,946 151,109,901 Zm00001d051328 wrky98 Chr4 154,581,235 154,589,610 GRMZM2G327349 wrky99 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 49,564,575 49,568,298 Zm00001d040554 wrky99 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 49,328,805 49,332,591 GRMZM2G403797 wtf1 Classical Gene Chr8 71,815,346 71,817,424 GRMZM2G403797 wtf1 from B73_v2 alignment to cDNA EU968423 |gi| 195642145 Chr8 71,815,346 71,817,424 Zm00001d009618 wtf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 73,467,308 73,468,804 AC210013.4_FG013 wtf2 Chr5 3,403,642 3,407,902 GRMZM2G350157 wtf4 Chr4 158,327,464 158,329,034 GRMZM2G043878 wusl1032 from: L14835 Chr1 41,441,065 41,442,219 Zm00001d028651 wusl1032 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 41,801,401 41,802,524 GRMZM2G024993 wx1 Classical Gene Chr9 23,267,684 23,271,612 Zm00001d045462 wx1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 23,107,329 23,111,318 GRMZM2G160032 x1 From homology to genbank accessions BT062834.1 and AF434193.1 Chr3 216,426,468 216,435,001 Zm00001d044127 x1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 219,913,912 219,922,356 GRMZM2G026980 xet1 homology to U15781 Chr5 53,934,855 53,936,718 Zm00001d014615 xet1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 55,728,573 55,730,436 GRMZM2G157817 xrcc3 Zhang et al, 2014 Chr5 174,035,742 174,036,908 Zm00001d016839 xrcc3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 178,069,833 178,070,708 GRMZM2G119783 xth1 from EU965412 Chr10 69,098,782 69,100,591 Zm00001d024386 xth1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 68,324,451 68,325,959 GRMZM2G170839 xyl1 Classical Gene Chr1 132,575,709 132,578,475 Zm00001d030468 xyl1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 134,962,829 134,965,595 GRMZM2G031004 xyn10 Olukolu, BA et al. 2016 Chr3 21,267,432 21,270,193 Zm00001d039958 xyn10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 20,688,079 20,690,571 GRMZM2G300348 y1 from B73_v2 alignment to NCBI Reference Sequence: NM_001114652.2 Chr6 82,180,486 82,184,345 Zm00001d036345 y1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 85,061,295 85,065,182 GRMZM2G011746 y9 from B73_v2 alignment to Genbank sequence NM_001139248 Chr10 13,613,175 13,616,729 Zm00001d023655 y9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 13,756,073 13,759,615 GRMZM2G054795 yab1 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 23,380,099 23,382,093 Zm00001d002829 yab1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 24,060,517 24,062,482 GRMZM2G167824 yab10 Classical Gene Chr1 225,097,097 225,102,315 Zm00001d032502 yab10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 228,680,490 228,685,551 GRMZM2G141955 yab11 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 175,665,423 175,671,657 Zm00001d031109 yab11 Chr1 177,577,710 177,583,959 GRMZM2G085873 yab12 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 260,424,101 260,427,079 Zm00001d033508 yab12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 264,932,858 264,936,252 GRMZM2G005353 yab14 Classical Gene Chr10 133,133,767 133,136,401 Zm00001d025944 yab14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 134,353,026 134,355,488 GRMZM2G529859 yab15 Classical Gene Chr5 189,249,290 189,252,175 Zm00001d017391 yab15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 194,316,184 194,319,929 GRMZM2G106204 yab3 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 6,315,293 6,328,611 Zm00001d018829 yab3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 6,686,761 6,700,152 GRMZM2G046829 yab4 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 159,501,156 159,503,146 Zm00001d021863 yab4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 164,878,265 164,880,033 GRMZM2G116646 yab5 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 89,439,022 89,445,313 Zm00001d041277 yab5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 109,762,671 109,768,864 GRMZM2G074124 yab6 from Lin et al 2012 Chr5 16,146,472 16,181,777 Zm00001d013662 yab6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 16,650,307 16,656,707 GRMZM2G074543 yab9 Classical Gene Chr5 23,592,937 23,597,115 Zm00001d013895 yab9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 24,089,489 24,093,556 GRMZM2G010196 ycf54 Belcher et al., 2015 Chr1 54,599,336 54,602,391 Zm00001d029027 ycf54 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 55,241,838 55,244,510 GRMZM2G086971 ypt1 Classical Gene Chr2 47,740,882 47,746,771 GRMZM2G086971 ypt1 from Cell Genomics Project Chr2 47,740,882 47,746,771 Zm00001d003589 ypt1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 49,078,847 49,082,055 GRMZM2G097728 ypt2 Chr5 191,132,644 191,136,724 Zm00001d017456 ypt2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 196,421,600 196,439,701 GRMZM2G416142 ypt3 from: X77795 Chr4 127,723,181 127,727,534 Zm00001d050915 ypt3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 130,729,909 130,734,070 GRMZM2G097746 ypt4 from: EU960755 Chr5 191,122,611 191,130,012 GRMZM2G156599 ys1 Classical Gene Chr5 190,726,052 190,729,182 Zm00001d017429 ys1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 195,832,862 195,835,971 GRMZM2G159393 yuc2 Bernardi et al. 2012. Chr10 98,816,289 98,818,353 Zm00001d025005 yuc2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 99,217,386 99,219,471 GRMZM2G107761 yuc3 Bernardi et al. 2012. Chr4 14,185,128 14,208,882 GRMZM2G141383 yuc4 From: Suzuki et al., 2016 Chr2 111,172,433 111,174,381 Zm00001d004467 yuc4 Chr2 113,711,203 113,713,227 GRMZM2G132489 yuc5 From: Suzuki et al., 2016 Chr7 38,907,938 38,910,587 Zm00001d019527 yuc5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 40,265,313 40,267,858 GRMZM2G019515 yuc6 From: Suzuki et al., 2016 Chr8 2,897,539 2,904,387 GRMZM2G480386 yuc7 Chr1 12,659,126 12,661,686 Zm00001d027759 yuc7 Chr1 12,848,106 12,850,651 GRMZM2G017193 yuc8 Chr8 155,795,371 155,798,447 Zm00001d011764 yuc8 Chr8 161,071,221 161,074,991 GRMZM2G333478 yuc9 Chr2 169,999,334 170,000,839 Zm00001d005439 yuc9 Chr2 174,188,973 174,190,169 GRMZM2G140016 yy1 Classical Gene Chr4 115,453,280 115,456,159 Zm00001d050730 yy1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 119,102,206 119,105,094 GRMZM2G114048 yz1 Chr3 216,399,970 216,403,243 Zm00001d044124 yz1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 219,881,372 219,884,342 GRMZM2G052890 zag1 Classical Gene Chr6 132,008,587 132,016,861 GRMZM2G052890 zag1 Chr6 132,008,587 132,016,861 Zm00001d037737 zag1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 135,893,605 135,901,920 GRMZM2G160687 zag2 Classical Gene Chr3 137,255,997 137,261,748 GRMZM2G160687 zag2 Chr3 137,255,997 137,261,748 Zm00001d041781 zag2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 137,903,169 137,908,918 GRMZM2G003514 zag5 Classical Gene Chr4 156,111,149 156,118,295 Zm00001d051465 zag5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 159,603,384 159,610,425 GRMZM2G026223 zag6 v2 (was GRMZM2G475390 in v1); mads56 locus assigned by the Grassius project, (Yilmaz et al 2009) Chr1 4,855,703 4,871,281 Zm00001d027425 zag6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 4,979,131 4,994,850 GRMZM2G148693 zap1 Chr2 236,669,675 236,679,078 Zm00001d007949 zap1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 243,898,782 243,908,001 GRMZM2G446201 zar1 from Guo et al 2014 Chr10 119,433,276 119,435,009 Zm00001d025490 zar1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 120,429,945 120,430,385 GRMZM2G137546 zar3 from Guo et al 2014 Chr2 220,671,352 220,673,700 Zm00001d007280 zar3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 226,781,429 226,781,725 GRMZM2G066029 zar4 Chr6 147,571,950 147,572,995 Zm00001d038201 zar4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 151,435,976 151,436,305 GRMZM2G175995 zar5 Chr6 3,976,733 3,977,389 Zm00001d035079 zar5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 4,023,664 4,024,023 GRMZM2G162250 zar6 Chr3 147,629,744 147,637,183 Zm00001d042055 zar6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 148,888,995 148,896,597 GRMZM2G113583 zar7 Chr5 174,393,336 174,397,308 Zm00001d016857 zar7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 178,448,930 178,449,250 GRMZM2G354338 zar8 from: JN252302 Chr6 143,057,719 143,058,385 Zm00001d038075 zar8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 146,934,845 146,935,081 GRMZM2G082943 zar9 Chr3 136,407,881 136,409,285 Zm00001d041774 zar9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 137,063,373 137,063,753 GRMZM2G127139 zep1 from EU970775; fha5 locus assigned by the Grassius project, (Yilmaz et al 2009) Chr2 45,068,944 45,077,882 Zm00001d003513 zep1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 46,304,266 46,305,156 GRMZM2G136344 zep2 from CO532283 Chr10 120,802,689 120,805,284 Zm00001d025545 zep2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 121,846,235 121,850,530 GRMZM2G098813 zfl1 Classical Gene Chr10 140,276,803 140,279,827 Zm00001d026231 zfl1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 141,561,862 141,564,767 GRMZM2G180190 zfl2 Classical Gene Chr2 12,649,206 12,652,213 GRMZM2G180190 zfl2 Chr2 12,649,206 12,652,213 Zm00001d002449 zfl2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 12,914,091 12,917,068 GRMZM2G116079 zfp30 from BT038274 and Entrez Gene Chr4 232,434,818 232,442,130 Zm00001d053622 zfp30 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 236,999,463 237,006,338 GRMZM2G068330 zhd1 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 11,278,503 11,281,332 Zm00001d049000 zhd1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 12,135,060 12,136,322 GRMZM2G470974 zhd10 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 2,632,775 2,633,842 Zm00001d023286 zhd10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 2,213,583 2,213,879 GRMZM2G328438 zhd11 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 73,654,879 73,656,447 Zm00001d009674 zhd11 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 75,385,981 75,386,700 GRMZM2G417229 zhd12 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 201,282,108 201,284,278 Zm00001d017784 zhd12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 206,700,640 206,701,893 GRMZM2G071112 zhd13 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 112,658,777 112,661,470 Zm00001d020459 zhd13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 115,920,523 115,920,858 GRMZM2G172586 zhd14 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 2,639,262 2,640,147 Zm00001d023289 zhd14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 2,219,925 2,220,221 GRMZM2G089619 zhd15 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 50,140,925 50,142,374 Zm00001d003645 zhd15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 51,732,292 51,733,194 GRMZM2G389379 zhd16 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 188,271,896 188,273,136 Zm00001d005931 zhd16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 193,254,454 193,255,314 GRMZM2G069365 zhd17 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 160,153,804 160,155,930 Zm00001d051573 zhd17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 163,144,095 163,145,435 GRMZM2G462417 zhd18 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 185,816,491 185,819,532 Zm00001d052396 zhd18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 189,093,521 189,098,209 GRMZM2G370863 zhd19 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 85,758,755 85,759,432 Zm00001d050452 zhd19 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 89,089,123 89,089,506 GRMZM2G161315 zhd2 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 112,903,752 112,905,463 Zm00001d020460 zhd2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 116,166,449 116,167,561 GRMZM2G051955 zhd20 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 181,822,882 181,824,556 Zm00001d005757 zhd20 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 186,640,920 186,642,005 GRMZM5G821755 zhd21 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 136,934,215 136,936,196 Zm00001d041780 zhd21 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 137,588,464 137,590,201 GRMZM5G884837 zhd22 from maize Cell Genomics Project (Oct 2013) Chr1 200,897,499 200,899,336 GRMZM2G346920 zhd3 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 200,897,499 200,899,336 Zm00001d031840 zhd3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 203,354,978 203,355,904 GRMZM2G425236 zhd4 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 10,223,283 10,224,485 Zm00001d013409 zhd4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 10,540,717 10,541,439 GRMZM2G438438 zhd5 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 212,577,817 212,579,728 Zm00001d032175 zhd5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 215,598,100 215,599,221 GRMZM2G414844 zhd6 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 166,375,940 166,377,410 GRMZM2G353734 zhd7 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 85,320,866 85,323,592 Zm00001d050443 zhd7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 88,621,453 88,622,553 GRMZM2G423423 zhd8 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 269,147,449 269,148,335 Zm00001d033791 zhd8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 273,799,885 273,800,580 GRMZM2G353076 zhd9 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 230,480,803 230,481,862 Zm00001d044662 zhd9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 234,295,985 234,296,843 GRMZM2G126507 zim1 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 108,871,320 108,874,327 Zm00001d020409 zim1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 112,014,245 112,017,209 GRMZM2G173596 zim10 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 36,976,140 36,977,007 Zm00001d014253 zim10 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 38,196,209 38,196,691 GRMZM2G122160 zim11 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 11,373,950 11,375,953 GRMZM2G101769 zim12 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 211,875,346 211,877,961 Zm00001d006860 zim12 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 218,018,545 218,021,082 GRMZM2G005954 zim13 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 184,649,167 184,651,569 Zm00001d005813 zim13 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 189,505,960 189,508,316 GRMZM2G036288 zim14 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 150,582,432 150,583,458 Zm00001d048268 zim14 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 153,485,703 153,486,254 GRMZM2G114681 zim15 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 180,086,933 180,089,653 Zm00001d005726 zim15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 184,842,614 184,845,272 GRMZM2G445634 zim16 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 16,791,540 16,792,462 Zm00001d027901 zim16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 17,156,322 17,156,867 GRMZM2G327263 zim17 assigned by the Grassius project, (Yilmaz et al 2009) Chr3 231,290,310 231,303,400 Zm00001d044707 zim17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 235,518,135 235,520,273 GRMZM2G145412 zim18 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 244,885,427 244,886,628 Zm00001d033050 zim18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 248,529,926 248,530,474 GRMZM2G382794 zim19 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 290,452,059 290,455,157 Zm00001d034536 zim19 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 295,853,517 295,853,873 GRMZM2G065896 zim2 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 8,462,838 8,467,789 Zm00001d013331 zim2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 8,803,187 8,808,065 GRMZM2G080509 zim20 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 87,858,244 87,863,266 Zm00001d036494 zim20 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 90,506,221 90,511,243 GRMZM2G024680 zim21 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 244,829,629 244,830,954 Zm00001d033048 zim21 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 248,467,942 248,474,649 GRMZM2G110131 zim22 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 30,037,028 30,039,032 Zm00001d028313 zim22 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 30,342,336 30,344,337 GRMZM2G089736 zim23 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 165,496,239 165,498,650 Zm00001d022139 zim23 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 171,049,645 171,052,026 GRMZM2G117513 zim24 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 69,894,564 69,897,090 Zm00001d029448 zim24 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 71,161,670 71,164,215 GRMZM2G314145 zim25 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 107,168,442 107,169,441 Zm00001d037082 zim25 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 111,656,645 111,659,015 GRMZM2G343157 zim26 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 16,776,170 16,777,317 Zm00001d027899 zim26 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 17,141,137 17,141,631 GRMZM5G838098 zim27 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 16,782,463 16,783,895 Zm00001d027900 zim27 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 17,147,073 17,148,511 GRMZM2G116614 zim28 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 121,257,089 121,259,224 Zm00001d020614 zim28 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 125,133,740 125,135,827 GRMZM2G064775 zim29 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 36,785,899 36,787,242 Zm00001d014249 zim29 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 38,005,178 38,006,513 GRMZM2G145458 zim3 assigned by the Grassius project, (Yilmaz et al 2009) Chr1 244,892,947 244,893,692 Zm00001d033049 zim3 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 248,522,876 248,523,364 AC197764.4_FG003 zim30 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 36,853,650 36,854,491 Zm00001d014250 zim30 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 38,073,928 38,074,939 GRMZM2G066020 zim31 assigned by the Grassius project, (Yilmaz et al 2009) Chr7 142,622,294 142,626,934 GRMZM2G086920 zim32 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 4,702,643 4,706,609 Zm00001d002029 zim32 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 4,666,311 4,670,063 GRMZM2G145407 zim33 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 65,326,353 65,328,811 Zm00001d003903 zim33 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 66,485,018 66,487,506 GRMZM2G143402 zim34 assigned by the Grassius project, (Yilmaz et al 2009) Chr10 145,369,299 145,373,351 Zm00001d026477 zim34 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 146,705,762 146,709,602 GRMZM2G151519 zim35 assigned by the Grassius project, (Yilmaz et al 2009) Chr4 80,927,425 80,930,017 Zm00001d050365 zim35 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 83,772,143 83,775,016 GRMZM2G058479 zim36 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 55,956,384 55,961,158 Zm00001d014656 zim36 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 57,723,133 57,728,010 GRMZM2G036351 zim4 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 150,514,712 150,515,694 Zm00001d048263 zim4 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 153,418,013 153,418,531 GRMZM2G054689 zim5 assigned by the Grassius project, (Yilmaz et al 2009) Chr8 64,176,829 64,179,518 Zm00001d009438 zim5 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 64,583,138 64,584,442 GRMZM2G036349 zim6 assigned by the Grassius project, (Yilmaz et al 2009) Chr9 150,518,483 150,519,836 GRMZM2G063632 zim7 assigned by the Grassius project, (Yilmaz et al 2009) Chr5 22,279,974 22,282,078 Zm00001d013855 zim7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 22,766,950 22,769,790 GRMZM2G171830 zim8 assigned by the Grassius project, (Yilmaz et al 2009) Chr2 97,375,739 97,377,764 Zm00001d004277 zim8 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 99,601,657 99,601,953 GRMZM2G338829 zim9 assigned by the Grassius project, (Yilmaz et al 2009) Chr6 14,014,557 14,015,717 Zm00001d035382 zim9 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 23,840,275 23,852,509 GRMZM2G016802 Zm00001d011972 Chr8 160,073,966 160,077,226 Zm00001d011972 Zm00001d011972 Chen et al, 2017 Chr8 165,426,450 165,430,584 GRMZM2G010669 zmm1 from X81199 Chr10 30,872,196 30,876,367 Zm00001d023955 zmm1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 31,669,358 31,673,544 GRMZM2G099522 zmm14 assigned by the Grassius project to mads14, (Yilmaz et al 2009) Chr1 26,671,505 26,681,206 Zm00001d028217 zmm14 Chr1 26,873,846 26,883,816 GRMZM2G553379 zmm15 from: BT065993; mads15 locus assigned by the Grassius project, (Yilmaz et al 2009) Chr5 6,993,294 7,011,505 Zm00001d013259 zmm15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 7,240,613 7,258,833 GRMZM2G110153 zmm16 Chr3 171,471,054 171,473,646 Zm00001d042618 zmm16 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr3 174,084,397 174,087,054 GRMZM2G130382 zmm17 from: BT039031; mads44 locus assigned by the Grassius project, (Yilmaz et al 2009) Chr5 85,114,743 85,115,386 Zm00001d015381 zmm17 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 87,397,071 87,399,754 GRMZM5G805387 zmm18 from: BT087013; mads18 locus assigned by the Grassius project, (Yilmaz et al 2009) Chr8 102,542,053 102,545,720 Zm00001d010233 zmm18 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 105,235,028 105,237,892 GRMZM2G359952 zmm2 Classical Gene Chr8 22,983,104 22,992,125 Zm00001d008882 zmm2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 23,705,985 23,714,926 Zm00001d034047 zmm24 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 282,303,560 282,312,748 GRMZM2G129034 zmm27 from: BT033398; mads49 locus assigned by the Grassius project, (Yilmaz et al 2009) Chr2 192,877,045 192,885,419 Zm00001d006094 zmm27 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 197,965,590 197,973,716 GRMZM2G152862 zmm29 from: BT064585 Chr8 102,450,748 102,454,585 Zm00001d010232 zmm29 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr8 105,191,750 105,194,782 AC197699.3_FG001 zmm3 from: Y09301 Chr9 17,021,226 17,024,054 Zm00001d045231 zmm3 Chr9 16,728,211 16,735,080 GRMZM2G071620 zmm31 Classical Gene Chr5 6,925,447 6,932,461 Zm00001d013258 zmm31 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr5 7,193,149 7,199,073 GRMZM2G159397 zmm6 Classical Gene Chr1 194,046,502 194,054,589 Zm00001d031620 zmm6 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 196,372,442 196,380,539 GRMZM2G097059 zmm7 mads7 locus assigned by the Grassius project, (Yilmaz et al 2009) Chr7 136,296,029 136,307,251 Zm00001d021057 zmm7 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 141,716,954 141,728,132 GRMZM2G102161 zmm8 Classical Gene Chr9 146,936,987 146,945,281 GRMZM5G836222 znf1 Classical Gene Chr9 102,483,351 102,485,242 Zm00001d046767 znf1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 104,954,887 104,960,193 GRMZM2G478553 znf2 Hawkins et al., 2014 Chr9 11,736,162 11,737,986 Zm00001d045051 znf2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 11,174,053 11,175,048 GRMZM2G048154 znf4 Chr1 42,126,085 42,126,784 GRMZM2G001205 znf5 Chr6 35,061,725 35,062,778 GRMZM5G804618 znf6 Chr3 181,613,553 181,615,034 GRMZM2G086277 znfn1 Chr6 79,660,379 79,662,222 GRMZM2G052562 znod1 Chr9 18,630,211 18,632,350 Zm00001d045302 znod1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr9 18,529,345 18,531,201 GRMZM2G008913 zp1 Classical Gene Chr4 29,963,321 29,964,591 GRMZM2G086294 zp15 Classical Gene Chr6 44,541,825 44,542,774 GRMZM2G086294 zp15 from alignment of AF371264.1 GI:16305114 to B73_v2 (MS Jul 2013) Chr6 44,541,825 44,542,774 Zm00001d035760 zp15 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr6 46,129,120 46,129,656 AF546188.1_FG005 zp2 Yang et al., 2016 Chr7 18,865,424 18,866,146 GRMZM2G044625 zp22.1 from: J01246 Chr4 5,122,439 5,123,472 GRMZM2G138727 zp27 Classical Gene Chr7 120,233,940 120,236,057 Zm00001d020592 zp27 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr7 123,982,344 123,983,015 GRMZM2G160739 zp3 Yang et al., 2016 Chr4 5,171,933 5,177,135 GRMZM2G404459 zpl2a from: Entrez Gene 606400 Chr4 5,521,259 5,523,302 Zm00001d048847 zpl2a Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr4 6,292,792 6,293,595 GRMZM2G158043 zpu1 from: Entrez Gene 541711 Chr2 109,260,299 109,311,620 Zm00001d004438 zpu1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr2 111,723,172 111,775,606 GRMZM2G106980 zrp2 Chr1 203,686,906 203,693,519 Zm00001d031909 zrp2 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr1 206,465,399 206,471,722 GRMZM2G143590 zyp1 Zhang et al., 2014 Chr10 121,738,153 121,749,667 Zm00001d025575 zyp1 Gene model association inferred from similarity with B73 RefGen_v3 gene models Chr10 122,821,714 122,833,327