Newly Characterized Genes

CHECK HERE FOR DESCRIPTIONS OF NEWLY CHARACTERIZED MAIZE GENES!

With the overwhelming number of genes that are being discovered by phenotypic and sequence analyses, the MaizeGDB staff is missing some that should be included in MaizeGDB. We need your help! Please let us know about new genes that you're working on or have recently read about.

MaizeGDB prefers not to assign formal gene names to gene models based purely on orthology. Known difficulties include inclusivity (there are over 10,000 functionally characterized Arabidopsis genes)* and some likelihood of errors in inferred functions. Unlike gene models, gene names are generally conserved unless differently named genes are found to be allelic. Of particular note, naming priveleges are customarily held by researchers who first confirm function.

We encourage researchers to use the annotation tool on the MaizeGDB gene model pages to add their insights about putative function, especially when not currently part of the Phytozome or Gramene pipelines.

Below is a list of newly reported or newly characterized genes (new reference, new gene product, and/or new variation) with which you may not yet be familiar. The genes are sorted by the last time the gene has been updated. To suggest genes for inclusion in this list, email us and include the gene name, full name, chromosome or bin, and a recent reference.

If you cannot find the gene you would like to recommend in the database, send us an email so that we can add it to the database!

This page is based on our monthly release. The updates are made around 4:00am CST.


         Recommended Genes


Most recent data | Six months | One year | All time

New or updated genes since six months ago. The cutoff date is May 20th, 2017.

Last UpdateGeneFull Name : DescriptionChromosome
or Bin
Gene
Model
Recent ReferenceOrthologsUpdate information
3 days agoGRMZM5G899476  : differently expressed between a steady kernel cracking NIL and its recurrent parent, indicating that this gene might be a candidate gene for kernel cracking
 
GRMZM5G899476
Yang, MT et al. 2017. Theor Appl Genet pp.doi: 10.1007/s00122-017-3012-3     Reference: November 17th, 2017
Variation: November 17th, 2017
Gene Model: November 17th, 2017
4 days agopza02337  :
2.02
       Variation: November 16th, 2017
4 days agopza02266  :
2.09
       Variation: November 16th, 2017
5 days agocpps2 copalyl diphosphate synthase2: encodes ent-kaurene synthase, a copalyl diphosphate synthase protein having close identity with An1 gene product; likely duplicate function explains why an1 plants are not fully dwarfed (Harris et al. 2005)
1.04
GRMZM2G044481
Meyer, J et al. 2017. BMC Plant Biology 17:197     Reference: November 15th, 2017
Gene Product: August 16th, 2012
Variation: December 28th, 2015
Gene Model: September 12th, 2011
Recommended by Ed Coe:
January 8th, 2008
5 days agopco118092  :
2.01
GRMZM2G070287
    Variation: September 25th, 2007
Gene Model: November 15th, 2017
5 days agoks4 kaurene synthase4:
 
AC214360.3_FG001
Meyer, J et al. 2017. BMC Plant Biology 17:197     Reference: November 15th, 2017
Gene Product: August 16th, 2012
Gene Model: October 27th, 2014
5 days agonut1 necrotic upper tips1: Ac-tagged mutation, necrotic upper leaf tips and blasted tassel.
 
GRMZM2G041668
Dong, Zhaobin; et al. 2016. Maize Genetics Conference Abstracts. 58:P191   AT1G12260 (TAIR)
LOC_Os06g01480 (MSU/TIGR)
Reference: June 22nd, 2016
Gene Product: September 22nd, 2015
Variation: November 15th, 2017
Gene Model: November 15th, 2017
5 days agonc1 Na+ content1: loss-of-function allele confers increased accumulation of Na+ in leaves, and salt hypersensitivity.
 
GRMZM2G047616
Zhang, M et al. 2017. New Phytol pp.DOI: 10.1111/nph.14882     Reference: November 15th, 2017
Gene Product: November 15th, 2017
Variation: November 15th, 2017
Gene Model: November 15th, 2017
5 days agoGRMZM2G135674  :
 
GRMZM2G135674
Zhang, M et al. 2017. New Phytol pp.DOI: 10.1111/nph.14882     Reference: November 15th, 2017
Gene Product: November 15th, 2017
Gene Model: November 15th, 2017
6 days agosfp1 sulfate permease1:
1.02
GRMZM2G159632
Huang, Q et al. 2018. J Plant Physiol 220:24-33     Reference: November 14th, 2017
Gene Product: November 14th, 2017
Gene Model: February 3rd, 2015
6 days agoast91 anti-sigma factor antagonist domain of sulfate transporter91:
 
GRMZM2G395114
Huang, Q et al. 2018. J Plant Physiol 220:24-33   AT1G23090 (TAIR)
LOC_Os04g55800 (MSU/TIGR)
Reference: November 14th, 2017
Gene Product: November 14th, 2017
Variation: June 30th, 2015
Gene Model: June 27th, 2015
6 days agosfp2 sulfate transporter2:
 
GRMZM2G080178
Huang, Q et al. 2018. J Plant Physiol 220:24-33     Reference: November 14th, 2017
Gene Product: November 14th, 2017
Gene Model: November 13th, 2017
6 days agosfp4 sulfate transporter4:
 
GRMZM2G154211
Huang, Q et al. 2018. J Plant Physiol 220:24-33     Reference: November 14th, 2017
Gene Product: November 14th, 2017
Gene Model: November 13th, 2017
6 days agosfp5 sulfate transporter5:
 
GRMZM2G444801
Huang, Q et al. 2018. J Plant Physiol 220:24-33     Reference: November 14th, 2017
Gene Product: November 14th, 2017
Gene Model: November 13th, 2017
6 days agosfp6 sulfate transporter6:
 
GRMZM2G158013
Huang, Q et al. 2018. J Plant Physiol 220:24-33     Reference: November 14th, 2017
Gene Product: November 14th, 2017
Gene Model: November 13th, 2017
6 days agosfp7 sulfate transporter7:
 
GRMZM2G068212
Huang, Q et al. 2018. J Plant Physiol 220:24-33     Reference: November 14th, 2017
Gene Product: November 14th, 2017
Gene Model: November 13th, 2017
6 days agosfp3 sulfate transporter3:
1.02
GRMZM2G042171
Huang, Q et al. 2018. J Plant Physiol 220:24-33     Reference: November 14th, 2017
Gene Product: November 14th, 2017
Gene Model: November 13th, 2017
7 days agotac1 tiller angle control1: Regulates leaf angle; ortholog of OsTAC1
 
GRMZM2G447987
Ku, LX et al. 2011. PLoS One 6:e2062   LOC_Os09g35980 (MSU/TIGR) Reference: November 12th, 2017
Variation: November 13th, 2017
Gene Model: November 11th, 2017
9 days agomwp1 milkweed pod1: leaf development transcription factor controlling abaxial cell fate, delineation of leaf margins, initiation of vascular and photosynthetic tissues.
7.02
GRMZM2G082264
Mantilla-Perez, MB; Fernandez, MG. 2017. J Exp Bot pp.doi:10.1093/jxb/erx378     Reference: November 11th, 2017
Gene Product: September 8th, 2008
Variation: January 30th, 2010
Gene Model: August 6th, 2014
Recommended by Mary Schaeffer (Polacco):
September 8th, 2008
9 days agortcs1 rootless concerning crown and seminal roots1: root system reduced solely to a primary root yet plants can be carried to seed; cyclin cDNAs absent; naphthalene acetic acid induces adventitious roots
1.02
GRMZM2G092542
Moreno-Ortega, B et al. 2017. Frontiers Plant Sci pp.doi: 10.3389/fpls.2017.01750     Reference: November 11th, 2017
Gene Product: October 5th, 2009
Variation: October 5th, 2009
Gene Model: July 23rd, 2013
9 days agobaf1 barren stalk fastigiate1: ear shoots often absent, or distorted and fused to culm at base; tassel branches erect, bundled, fused to culm at base
9.02
GRMZM2G072274
Yin, DD et al. 2017. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2017.11.031   LOC_Os06g04540 (MSU/TIGR)
Os06g0136900 (Gramene)
Reference: November 11th, 2017
Gene Product: November 11th, 2017
Variation: August 15th, 2011
Gene Model: December 8th, 2014
9 days agolgn1 liguleless narrow1: Mutant leaves are narrow and branching in the inflorescence is reduced.
 
GRMZM2G134382
Mantilla-Perez, MB; Fernandez, MG. 2017. J Exp Bot pp.doi:10.1093/jxb/erx378     Reference: November 11th, 2017
Gene Product: January 24th, 2013
Variation: January 15th, 2016
Gene Model: January 3rd, 2013
9 days agola1 lazy plant1: prostrate growth habit
4.03 - 4.04
GRMZM2G135019
Mantilla-Perez, MB; Fernandez, MG. 2017. J Exp Bot pp.doi:10.1093/jxb/erx378     Reference: November 11th, 2017
Gene Product: October 9th, 2013
Variation: February 26th, 2015
Gene Model: October 8th, 2013
9 days agolg1 liguleless1: In the liguleless1 mutant, ligule and auricle are missing; leaves are upright
2.01
   Mantilla-Perez, MB; Fernandez, MG. 2017. J Exp Bot pp.doi:10.1093/jxb/erx378     Reference: November 11th, 2017
Gene Product: December 18th, 2014
Variation: November 8th, 2007
9 days agolg2 liguleless2: like lg1, less extreme
3.06
   Mantilla-Perez, MB; Fernandez, MG. 2017. J Exp Bot pp.doi:10.1093/jxb/erx378     Reference: November 11th, 2017
Gene Product: August 22nd, 2014
Variation: August 20th, 2014
9 days agolg3 liguleless3: dominant Lg3 plants lack ligule; leaves upright, broad, often concave and pleated; homeobox similar to knox5 and knox11
3.04
   Mantilla-Perez, MB; Fernandez, MG. 2017. J Exp Bot pp.doi:10.1093/jxb/erx378     Reference: November 11th, 2017
Gene Product: August 22nd, 2014
Variation: March 16th, 2015
9 days agolg4 liguleless4: dominant Lg4 plants lack ligule and auricle but show vestiges sporadically in bladeclass I homeobox; cDNA and genomic clones; sequence and expression similar to lg3 and knox5
8.05
GRMZM2G094241
Mantilla-Perez, MB; Fernandez, MG. 2017. J Exp Bot pp.doi:10.1093/jxb/erx378     Reference: November 11th, 2017
Gene Product: August 22nd, 2014
Variation: May 18th, 2012
Gene Model: May 24th, 2012
9 days agona2 nana plant2: like na1
5.03
GRMZM2G057000
Mantilla-Perez, MB; Fernandez, MG. 2017. J Exp Bot pp.doi:10.1093/jxb/erx378   AT3G19820 (TAIR) Reference: November 11th, 2017
Gene Product: June 13th, 2016
Variation: June 13th, 2016
Gene Model: June 13th, 2016
9 days agowab1 Wavy auricles in blades1: dominant confers auricle tissue in blade portion of leafrecessive mutants showed extremely acute tassel branch angles accompanied by a significant reduction in the size of the pulvinus compared with normal plants
2.06 - 2.07
GRMZM2G110242
Yin, DD et al. 2017. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2017.11.031   LOC_Os09g24480 (MSU/TIGR)
Os09g0410500 (Gramene)
Reference: November 11th, 2017
Gene Product: September 14th, 2016
Variation: November 2nd, 2014
Gene Model: November 2nd, 2014
9 days agorld1 rolled leaf1: in dominant Rld1 plants, leaves are tightly rolled and tend to be entangled; ligular flaps on abaxial surface of leaf; resembles Ce1
9.07 - 9.08
   Mantilla-Perez, MB; Fernandez, MG. 2017. J Exp Bot pp.doi:10.1093/jxb/erx378     Reference: November 11th, 2017
Gene Product: October 6th, 2015
Variation: June 30th, 2012
9 days agorum1 rootless with undetectable meristems1: primordia for seminal roots and for laterals on the primary root absent
 
GRMZM2G037368
Moreno-Ortega, B et al. 2017. Frontiers Plant Sci pp.doi: 10.3389/fpls.2017.01750     Reference: November 11th, 2017
Gene Product: June 16th, 2014
Variation: June 16th, 2014
Gene Model: June 16th, 2014
9 days agobrs1 brassinosteroid synthesis1:
1.03
GRMZM2G065635
Mantilla-Perez, MB; Fernandez, MG. 2017. J Exp Bot pp.doi:10.1093/jxb/erx378   AT3G50660 (TAIR) Reference: November 11th, 2017
Gene Product: September 20th, 2010
Variation: November 7th, 2013
Gene Model: October 3rd, 2012
9 days agobrd1 brassinosteroid-deficient dwarf1: Mutant plants have essentially no internode elongation and exhibit no etiolation response when germinated in the dark.
 
GRMZM2G103773
Mantilla-Perez, MB; Fernandez, MG. 2017. J Exp Bot pp.doi:10.1093/jxb/erx378     Reference: November 11th, 2017
Gene Product: February 18th, 2012
Variation: March 5th, 2012
Gene Model: February 15th, 2012
10 days agobv1 brevis plant1: short internodes, short plant
5.04 - 5.05
GRMZM2G366698
Chen, Y et al. 2017. J. Plant Biochem. Biotechnol. DOI: 10.1007/s13562-017-0433-7   LOC_Os02g27620 (MSU/TIGR)
Os02g0477700 (Gramene)
Reference: November 10th, 2017
Gene Product: January 16th, 2016
Variation: January 16th, 2016
Gene Model: January 16th, 2016
10 days agokrp1 kinesin-related protein1:
4.06
GRMZM2G129569
Lawrence, CJ et al. 2002. J Mol Evol 54:42-53     Reference: September 1st, 2003
Gene Product: November 10th, 2017
Gene Model: March 3rd, 2016
10 days agokrp2 kinesin-related protein2:
9.03
GRMZM2G136838
Lawrence, CJ et al. 2002. J Mol Evol 54:42-53     Reference: September 1st, 2003
Gene Product: November 10th, 2017
Variation: January 4th, 2013
Gene Model: March 3rd, 2016
10 days agokrp3 kinesin-related protein3:
8.05
GRMZM2G173700
Lawrence, CJ et al. 2002. J Mol Evol 54:42-53     Reference: September 1st, 2003
Gene Product: November 10th, 2017
Gene Model: March 3rd, 2016
10 days agokrp4 kinesin-related protein4:
1.07
GRMZM2G320689
Lawrence, CJ et al. 2002. J Mol Evol 54:42-53     Reference: September 1st, 2003
Gene Product: November 10th, 2017
Variation: April 22nd, 2006
Gene Model: March 3rd, 2016
10 days agokrp5 kinesin-related protein5:
6.04
GRMZM2G093391
Lawrence, CJ et al. 2002. J Mol Evol 54:42-53     Reference: September 1st, 2003
Gene Product: November 10th, 2017
Gene Model: August 13th, 2014
10 days agodv1 divergent spindle1: chromosomes unoriented at metaphase I; partial male and female sterility; encodes a kinesin-14A motor protein
2.02
GRMZM2G114861
Higgins, DM et al. 2016. Frontiers Plant Sci 7:1277     Reference: August 17th, 2016
Gene Product: November 10th, 2017
Variation: August 17th, 2016
Gene Model: August 13th, 2014
10 days agokrp8 kinesin-related protein8:
4.08
GRMZM2G132371
Lawrence, CJ et al. 2002. J Mol Evol 54:42-53     Reference: September 1st, 2003
Gene Product: November 10th, 2017
Variation: April 4th, 2015
Gene Model: April 4th, 2015
10 days agokrp9 kinesin-related protein9: Is a member of MCAK family and may depolymerize microtubules per C. Lawrence.
6.05
GRMZM5G881464
Lawrence, CJ et al. 2002. J Mol Evol 54:42-53     Reference: September 1st, 2003
Gene Product: November 10th, 2017
Gene Model: March 3rd, 2016
10 days agokrp11 kinesin-related protein11:
7.00
GRMZM2G436981
Higgins, DM et al. 2016. Frontiers Plant Sci 7:1277     Reference: August 17th, 2016
Gene Product: November 10th, 2017
Variation: July 30th, 2015
Gene Model: July 30th, 2015
10 days agokrp13 kinesin-related protein13:
1.08
GRMZM2G034828
Lawrence, CJ et al. 2002. J Mol Evol 54:42-53     Reference: September 1st, 2003
Gene Product: November 10th, 2017
Gene Model: February 1st, 2015
10 days agokrp15 kinesin-related protein15:
10.04
GRMZM2G054418
Lawrence, CJ et al. 2002. J Mol Evol 54:42-53     Reference: September 1st, 2003
Gene Product: November 10th, 2017
Variation: January 3rd, 2013
Gene Model: March 3rd, 2016
10 days agokrp16 kinesin-related protein16:
8.09
GRMZM2G124883
Lawrence, CJ et al. 2002. J Mol Evol 54:42-53     Reference: September 1st, 2003
Gene Product: November 10th, 2017
Variation: January 4th, 2013
Gene Model: March 3rd, 2016
11 days agomop1 mediator of paramutation1: recessive changes B' phenotype to dark, similar to B1-I
2.04
GRMZM2G042443
Wang, PH et al. 2017. PLoS One 12:e0187157     Reference: November 9th, 2017
Gene Product: August 8th, 2006
Variation: August 8th, 2006
Gene Model: April 24th, 2013
Recommended by Ed Coe:
January 8th, 2008
11 days agop1 pericarp color1: dominant P1 regulates red pigment (phlobaphenes) in cob and pericarp (ex. P1-wr red cob; P1-rr red pericarp and cob) and in tassel glumes and husks; tissue-specific allele variations; SSR phi095
1.03
   Wang, PH et al. 2017. PLoS One 12:e0187157     Reference: November 9th, 2017
Gene Product: October 13th, 2010
Variation: May 3rd, 2016
12 days agophm4353  :
7.02
       Variation: November 8th, 2017
12 days agopza00132  : NCBI: similar to Drosophila nucleoporin 58
7.02
       Variation: November 8th, 2017
12 days agopza01677  :
10.03
       Variation: November 8th, 2017
13 days agopza00271  :
4.07
       Variation: November 7th, 2017
13 days agopza01360  :
3.09
       Variation: November 7th, 2017
13 days agomyb42 myb transcription factor 42: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.09
   Agarwal, T et al. 2016. Sci. Rep. 6:28502   LOC_Os08g43550 (MSU/TIGR) Reference: June 23rd, 2016
Gene Product: February 16th, 2011
Variation: November 7th, 2017
13 days agofbr1 few-branched1: dominant Fbr1 plants have tassel reduced to 0-3 branches; bract replaces next-to-bottom branch
 
   Dari, S et al. 2017. Maydica 62:2_14     Reference: November 7th, 2017
Variation: September 1st, 2003
13 days agopan1 pangloss1: Defines polarization in divisions of subsidiary mother cells at guard cells
 
GRMZM5G836190
Nelson, RJ et al. 2017. Nat Rev Genet pp.doi: 10.1038/nrg.2017.82     Reference: November 7th, 2017
Gene Product: November 27th, 2012
Variation: July 11th, 2014
Gene Model: November 2nd, 2011
13 days agoomt2 Caffeoyl CoA O-methyltransferase2:
9.02
GRMZM2G099363
Nelson, RJ et al. 2017. Nat Rev Genet pp.doi: 10.1038/nrg.2017.82     Reference: November 7th, 2017
Gene Product: January 5th, 2014
Variation: May 13th, 2016
Gene Model: September 17th, 2014
13 days agohtn1 Helminthosporium turcicum resistanceN1: formerly HtN; dominant Htn1 plants resistant to Exserohilum turcicum
8.06
GRMZM2G164612
Nelson, RJ et al. 2017. Nat Rev Genet pp.doi: 10.1038/nrg.2017.82   At1g66980 (TAIR)
LOC_Os01g49580 (MSU/TIGR)
Reference: November 7th, 2017
Gene Product: July 1st, 2015
Variation: July 14th, 2015
Gene Model: July 1st, 2015
13 days agorcg1 resistance to Colletotrichum graminicola1: Involved in Anthracnose stalk rot resistance
 
   Frey, TJ et al. 2011. Crop Sci 51:1551-1563     Reference: November 7th, 2017
Variation: November 7th, 2017
16 days agopza00515  :
2.06
GRMZM2G030312
    Variation: November 3rd, 2017
Gene Model: November 4th, 2017
17 days agophm4880  :
2.05
       Variation: November 3rd, 2017
17 days agosacd3 stearoyl-acyl-carrier-protein desaturase3:
1.05
   Han, YJ et al. 2016. Theor Appl Genet pp.doi: 10.1007/s00122-016-2800-5     Reference: October 10th, 2016
Gene Product: October 10th, 2016
Variation: November 3rd, 2017
17 days agoumc1635  :
2.05
GRMZM2G085086
    Variation: November 3rd, 2017
Gene Model: November 3rd, 2017
18 days agoprp1 pathogenesis-related protein1: cDNA clone, single copy, deduced protein product is basic (vs. acidic), normally accumulates during germination,induced by fungal elicitors but not wounding
8.03
   Majumdar, R et al. 2017. Frontiers Plant Sci pp.doi: 10.3389/fpls.2017.01758     Reference: November 2nd, 2017
Gene Product: September 1st, 2003
Variation: September 1st, 2003
19 days agobsd2 bundle sheath defective2: bundle sheath chloroplasts disrupted; high chlorophyll fluorescence, seedling lethal
1.05
   Salesse, CE et al. 2017. Plant Physiol pp.DOI: 10.1104/pp.17.01346     Reference: November 1st, 2017
Gene Product: September 1st, 2003
Variation: October 14th, 2009
19 days agopza00381  :
1.08
       Variation: November 1st, 2017
19 days agopza00752  :
1.04
       Variation: November 1st, 2017
20 days agofl3 floury3: endosperm opaque, soft; dosage effect
8.03
GRMZM2G006585
Li, Q, et al. 2017. Plant Cell. 0:doi: 10.1105/tpc.17.00576     Reference: October 31st, 2017
Gene Product: September 7th, 2017
Variation: September 7th, 2017
Gene Model: September 7th, 2017
20 days agotb1 teosinte branched1: many tillers; ear branches tassel-like; affects apical dominanceGRASSIUS: TCP transcription factor (TCP1)
1.09
   Dong, Z, et al. 2017. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.1714960114     Reference: October 31st, 2017
Gene Product: September 14th, 2016
Variation: February 2nd, 2017
20 days agotru1 tassels replace upper ears1: upper ear branches tassel-like, tillers bear ears
3.04 - 3.10
GRMZM2G039867
Dong, Z, et al. 2017. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.1714960114     Reference: October 31st, 2017
Gene Product: December 17th, 2013
Variation: December 18th, 2013
Gene Model: December 17th, 2013
20 days agohggt1 homogentisate geranylgeranyl transferase1: vitamin E synthesis; contributes to variation in levels of tocotrienol (Lipka et al 2013)
 
GRMZM2G173358
Diepenbrock, CH, et al. 2017. Plant Cell. 0:doi: 10.1105/tpc.17.00475     Reference: October 31st, 2017
Gene Product: June 26th, 2013
Gene Model: June 26th, 2013
20 days agohis1a histone1a: cDNA sequences, SSR umc1577
7.01
GRMZM2G401308
Kalamajka, R et al. 2010. Planta 231:1127-35     Reference: October 24th, 2017
Gene Product: October 24th, 2017
Variation: October 31st, 2017
Gene Model: July 24th, 2015
20 days agogtc102 global transcription factor C (Spt16):
5.03
GRMZM5G806358
    Gene Product: July 17th, 2006
Variation: September 1st, 2003
Gene Model: October 31st, 2017
20 days agohon106a histone H1 106a:
5.03
GRMZM2G121221
Kalamajka, R et al. 2010. Planta 231:1127-35     Reference: October 24th, 2017
Gene Product: October 24th, 2017
Gene Model: October 31st, 2017
20 days agodxs3 deoxy xylulose synthase3:
 
GRMZM2G173641
Diepenbrock, CH, et al. 2017. Plant Cell. 0:doi: 10.1105/tpc.17.00475     Reference: October 31st, 2017
Gene Product: August 17th, 2004
Variation: February 15th, 2012
Gene Model: December 9th, 2011
20 days agovte4 vitamin E synthesis4:
5.06
GRMZM2G173358
Diepenbrock, CH, et al. 2017. Plant Cell. 0:doi: 10.1105/tpc.17.00475     Reference: October 31st, 2017
Gene Product: June 26th, 2013
Gene Model: June 26th, 2013
20 days agodxs2 deoxy xylulose synthase 2: root specific; function inferred from sequence and expression pattern comparison with Medicago trunculata genes
9.03
GRMZM2G493395
Diepenbrock, CH, et al. 2017. Plant Cell. 0:doi: 10.1105/tpc.17.00475     Reference: October 31st, 2017
Gene Product: August 17th, 2004
Variation: February 15th, 2012
Gene Model: December 9th, 2011
20 days agohppd1 4-hydroxyphenylpyruvate dioxygenase 1:
5.04
GRMZM2G088396
Diepenbrock, CH, et al. 2017. Plant Cell. 0:doi: 10.1105/tpc.17.00475     Reference: October 31st, 2017
Gene Product: June 2nd, 2005
Variation: September 28th, 2010
Gene Model: July 28th, 2016
20 days agoapg1 albino or pale green mutant1: MPBQ/MSBQ methyltransferase involved in plastoquinone synthesis. (A. Barkan, 2015)ortholog of Arabidopsis At3g63410, which encodes MPBQ/MSBQ methyltransferase involved in plastoquinone synthesis (Belcher et al 2015)
1.05
GRMZM2G082998
Diepenbrock, CH, et al. 2017. Plant Cell. 0:doi: 10.1105/tpc.17.00475     Reference: October 31st, 2017
Variation: December 30th, 2015
Gene Model: February 17th, 2015
23 days agomrp1 Myb related protein1: transforms aleurone cells into endosperm transfer cells and required to maintain transfer cell phenotype
8.05
   Bergareche, D et al. 2017. Planta pp.doi: 10.1007/s00425-017-2800-y     Reference: October 28th, 2017
Gene Product: September 1st, 2003
Variation: September 1st, 2003
26 days agomybr6 MYB-related-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.09
GRMZM2G087817
Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Variation: February 17th, 2004
Gene Model: October 25th, 2017
26 days agokch2 potassium channel2:
6.05
GRMZM2G020859
Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: February 20th, 2008
Variation: October 25th, 2017
Gene Model: July 23rd, 2014
27 days agog2 golden plant2: (aka g5, pg14, v19, pg-m, bsd1) golden pale-green, weak plants; sheaths whitish yellow-green; pg-m (now g2-pg14::I) of Peterson is a mutable allele that responds to En; small bundle sheath plastids; SSR umc2101, umc2102, umc2103, umc2104, umc2105, umc2106, umc2107, umc2108.pale green seedling lethal, reduced Rubisco and NADP-malic enzyme, small bundle sheath plastids
3.00 - 3.01
GRMZM2G087804
Wang, P et al. 2017. Curr Biol pp.doi: 10.1016/j.cub.2017.09.040     Reference: October 24th, 2017
Gene Product: September 5th, 2006
Variation: October 24th, 2017
Gene Model: August 30th, 2013
27 days agohon110 histone one (H1): (was H1a); mapped by electrophoretic mobility polymorphism as alh1
1.11
GRMZM2G164020
Kalamajka, R et al. 2010. Planta 231:1127-35     Reference: October 24th, 2017
Variation: June 25th, 2014
Gene Model: October 25th, 2013
27 days agoglk1 G2-like1: g2 golden2 paralog; specifically affects mesophyll chloroplast assembly, but not bundle sheath chloroplast assembly (Wang et al 2013)
9.00
GRMZM2G026833
Wang, P et al. 2017. Curr Biol pp.doi: 10.1016/j.cub.2017.09.040     Reference: October 24th, 2017
Gene Product: August 30th, 2013
Variation: May 9th, 2009
Gene Model: September 27th, 2012
30 days agobap2 basal layer antifungal protein2: cDNA, multiple copies; antifungal activity; basal endosperm cell specific
4.05
   Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Gene Product: September 1st, 2003
Variation: September 1st, 2003
30 days agoms26 male sterile26: tapetal cells abnormal, die early; microspores vacuolate early and abort after the tetrad stage
1.02 - 1.02
   Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Gene Product: September 30th, 2013
Variation: September 27th, 2013
30 days agoadf1 actin depolymerizing factor1: pollen-specific cDNA similar to vertebrate actin polymerization/depolymerization factors
7.03
   Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Gene Product: September 1st, 2003
Variation: July 22nd, 2015
30 days agochr101 chromatin complex subunit A 101:
2.10
   Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Variation: December 22nd, 2014
30 days agoadh2 alcohol dehydrogenase2: electrophoretic mobility, null alleles are known; dimeric, intra/interlocus hybrid bands occur; SSRs nc004, phi021
4.03
GRMZM2G098346
Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Gene Product: July 8th, 2009
Variation: September 1st, 2003
Gene Model: May 31st, 2014
30 days agoba1 barren stalk1: ear shoots and most tassel branches and spikelets absent
3.06
   Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Gene Product: July 19th, 2012
Variation: March 18th, 2015
30 days agobt1 brittle endosperm1: mature kernel collapsed, angular, often translucent and brittle (alleles sh3, sh5)
5.04
   Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Gene Product: February 24th, 2015
Variation: January 28th, 2014
30 days agobx1 benzoxazinless1: plastid localized, committed step in cyclic hydroxamates/DIMBOA synthesis; insect resistance in young seedlings; SSR umc1022
4.00
GRMZM2G085381
Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Gene Product: October 14th, 2011
Variation: October 24th, 2011
Gene Model: October 14th, 2011
30 days agoglb2 globulin2: presence-absence
1.11
   Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Gene Product: September 1st, 2003
Variation: March 30th, 2009
30 days agogpc1 glyceraldehyde-3-phosphate dehydrogenase1: cytosolic, C subunit, type 3 gene; coding region has sequence homology to gpc2, unique 3' untranslated region, constitutive expression; SSRs phi026, 079
4.05
   Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Gene Product: September 1st, 2003
Variation: September 1st, 2003
30 days agohm1 Helminthosporium carbonum susceptibility1: disease lesions vs. yellowish flecks (Hm1, resistant) on leaves with Cochliobolus carbonum race 1
1.06
   Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Gene Product: May 23rd, 2014
Variation: September 1st, 2003
30 days agopl1 purple plant1: Pl1 plant tissues have light-independent pigment, pl1 blue light-dependent; Pl1-Bh1, colored patches in c1 aleurone and in plant; transcriptional activator for flavonoid genes; SSR phi031, nc009, nc010. umc1014
6.04
   Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Gene Product: June 16th, 2015
Variation: March 28th, 2013
30 days agotpi3 triose phosphate isomerase3: electrophoretic mobility; cytosolic; dimeric; intra/interlocus hybrids occur with Tpi4 & Tpi5
8.02
GRMZM2G018177
Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Gene Product: September 1st, 2003
Variation: January 15th, 2015
Gene Model: January 15th, 2015
30 days agots1 tassel seed1: tassel pistillate and pendant; if removed, small ear with irregular kernel placement develops
2.04 - 2.05
   Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Gene Product: June 11th, 2014
Variation: June 11th, 2014
30 days agormr1 required to maintain repression1:
6.07
   Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Gene Product: April 30th, 2008
Variation: May 10th, 2013
30 days agosam2 S-adenosyl methionine decarboxylase2: leaf cDNA, csu6
2.04
   Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Gene Product: September 1st, 2003
Variation: July 13th, 2013
30 days agotub2 beta tubulin2: cDNA sequenced; single copy ( Southern blots)
8.03
GRMZM2G334899
Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Gene Product: September 1st, 2003
Variation: January 15th, 2015
Gene Model: August 24th, 2014
30 days agopdc2 pyruvate decarboxylase2: cDNA available; gene-specific probe
8.02
   Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Gene Product: September 1st, 2003
Variation: March 30th, 2007
30 days agolhcb1 light harvesting chlorophyll a/b binding protein1: unique genomic sequence; promoter is light regulated in tobacco and maize leaf mesophyll protoplasts (Knight et al. 1992)gene-specific cDNA probe; low expression in bundle sheath cells (aka cab1)
3.09
   Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Gene Product: January 8th, 2005
30 days agofdx3 ferredoxin3: ubiquitous, cDNA clone, gene specific probe, amino acid sequence; SSR umc1064, pFD3
1.11
GRMZM2G053458
Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Gene Product: September 1st, 2003
Variation: January 29th, 2015
Gene Model: July 25th, 2017
30 days agozfl2 Zea floricaula leafy2: zfl1 and zfl2 double mutants exhibit a disruption of floral organ identity and patterning, as well as defects in inflorescence architecture and in the vegetative to reproductive phase transition.
2.02
   Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Variation: October 9th, 2014
30 days agostc1 sesquiterpene cyclase1: single copy; insect defense reponse; encodes a sesquiterpene cyclase involved in terpenoid biosynthesis
9.01
GRMZM2G177098
Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Gene Product: September 5th, 2008
Variation: June 30th, 2012
Gene Model: August 22nd, 2012
30 days agochi1 chalcone flavanone isomerase1: genomic sequence, gene-specific probe, transcript defined by S1-nuclease protection analysis
1.11
GRMZM2G155329
Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Gene Product: May 8th, 2012
Variation: October 10th, 2012
Gene Model: May 9th, 2012
30 days agomads1 MADS1: transcripts detected in egg cells and invivo zygotes of maize, also expressed in synergids and antipodal cells. during flower development expressed in all ear spikelet organ primordia at intermediate stages
9.07
   Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Gene Product: September 1st, 2003
Variation: April 15th, 2008
30 days agocyc7 cyclin7: Class I; sense RNA functions in Xenopus oocytes
3.06
   Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Gene Product: June 26th, 2009
Variation: October 23rd, 2012
30 days agopac1 pale aleurone color1: recessive, non-lethal, regulates reduced pigment in kernels
5.06
   Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Variation: February 23rd, 2013
30 days agochr106 chromatin complex subunit A 106:
1.10
GRMZM2G071025
Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Variation: December 22nd, 2014
Gene Model: December 22nd, 2014
30 days agotdy1 tie-dyed1: Leaf blades develop variegated chlorotic and green regions; chlorotic regions hyperaccumulate carbohydrates.(Braun 2008)
6.07
GRMZM2G321778
Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Variation: September 14th, 2011
Gene Model: July 14th, 2011
30 days agophyC2 phytochromeC2: red/far red light signal receptor; minor phytochrome C transcript in seedling leaf blade, sheath, mesocotyl. See also phyC1, phyA1, phyA2 phyB1, phyB2.
5.01
   Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Gene Product: June 30th, 2009
Variation: June 30th, 2009
31 days agow1 white seedling1: white seedling (yellow with l1), germinates normally; plastid transcripts variously aberrant
6.05
   Han, CD; Derby, RJ; Schnable, PS; Martienssen, RA. 1995. Maydica 40:13-22     Reference: October 5th, 2011
Variation: October 20th, 2017
31 days agoumc1819  : similar to Arabidopsis transducin/WD40 domain-containing protein
1.12
GRMZM2G058511
    Variation: September 1st, 2003
Gene Model: October 20th, 2017
31 days agonpi241a  : candidate for clavata3 (CLV3) ortholog
1.11
GRMZM2G474685
Je, BI et al. 2016. Nature Genetics 48:785-791     Reference: September 17th, 2016
Variation: October 20th, 2017
Gene Model: October 19th, 2017
31 days agotha8 thylakoid assembly8: Chloroplast PPR protein. Required for splicing chloroplast ycf3-int2 and trnA introns and is bound to those introns in vivo. (A. Barkan, 2015)
2.06
GRMZM2G060906
Khrouchtchova, A et al. 2012. RNA-Publ RNA Soc 18:1197-1209     Reference: October 20th, 2017
Variation: May 9th, 2009
Gene Model: February 17th, 2015
31 days agootp51 organelle transcript processing51: Chloroplast PPR protein with LAGLIDADG domain. Required for splicing chloroplast ycf3-int2 intron (A. Barkan, 2015). Enclodes PR-LAGLIDADG protein; required for splicing cp ycf3-int2
 
GRMZM2G325019
Khrouchtchova, A et al. 2012. RNA-Publ RNA Soc 18:1197-1209     Reference: October 20th, 2017
Gene Product: December 27th, 2016
Variation: October 20th, 2017
Gene Model: February 17th, 2015
32 days agozep1 zeaxanthin epoxidase1:
2.04
GRMZM2G127139
Xu, XQ et al. 2017. BMC Plant Biology 17:163     Reference: October 19th, 2017
Gene Product: December 10th, 2011
Variation: August 29th, 2011
Gene Model: April 8th, 2013
32 days agolyce1 lycopene epsilon cyclase1: determines qualitative composition of endosperm carotenoids
8.05
GRMZM2G012966
Xu, XQ et al. 2017. BMC Plant Biology 17:163     Reference: October 19th, 2017
Gene Product: December 10th, 2011
Variation: October 3rd, 2011
Gene Model: October 3rd, 2011
32 days agoumc1118  :
1.11
GRMZM2G012224
    Variation: September 21st, 2016
Gene Model: October 19th, 2017
32 days agoadf3 actin depolymerizing factor3: leaf cDNA similar to vertebrate actin polymerization/depolymerization factors, not expressed in pollen; expressed in E. coli; two copies detected in Southerns and by one overgo (PCO115125a in ctg64, 1L; PCO115125b in ctg204, 5S), which are syntenous regions.
1.11
GRMZM2G060702
Armstrong, CL et al. 1992. Theor Appl Genet 84:755-762     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: October 19th, 2017
Gene Model: October 19th, 2017
32 days agocyp13 cytochrome P450 13: encodes CYP97A
 
GRMZM5G837869
Xu, XQ et al. 2017. BMC Plant Biology 17:163     Reference: October 19th, 2017
Gene Product: April 8th, 2013
Variation: July 8th, 2017
Gene Model: April 8th, 2013
32 days agovde1 violaxanthin de-epoxidase1: Encodes violaxanthin de-epoxidase. Based on sequence similarity to Arabiodopsis gene.
 
GRMZM2G027219
Xu, XQ et al. 2017. BMC Plant Biology 17:163     Reference: October 19th, 2017
Gene Product: December 13th, 2011
Gene Model: April 9th, 2013
32 days agow*-8954 white*-8954:
 
       Variation: October 19th, 2017
34 days agoafd1 absence of first division1: male and female sterility; early meiosis
6.07
GRMZM2G059037
Liu, Y et al. 2017. Plant J pp.doi: 10.1111/tpj.13748   AT5G05490 (TAIR)
LOC_Os05g50410 (MSU/TIGR)
LOC_Os05g50410 (Gramene)
Reference: October 17th, 2017
Gene Product: July 30th, 2009
Variation: August 11th, 2011
Gene Model: July 14th, 2011
34 days agosgo1 shugoshin centromeric cohesion1: male and female sterile; meiosis; centromere cohesion; segregation of sister chromatids.
7.02
GRMZM2G074082
Liu, Y et al. 2017. Plant J pp.doi: 10.1111/tpj.13748     Reference: October 17th, 2017
Gene Product: July 29th, 2009
Variation: August 13th, 2011
Gene Model: July 14th, 2011
35 days agopsei2 cystatin2: cDNA expressed in E. coli inhibits cysteine proteinases; sequence and gene product activity distinct from psei1
8.08
   Forestan, C et al. 2017. BMC Plant Biology 17:161     Reference: October 16th, 2017
Gene Product: April 21st, 2008
Variation: January 15th, 2015
35 days agob1 colored plant1: dominant B1 plants have anthocyanin in major plant tissues; some alleles affect aleurone and embryo color; regulates flavonoid enzymes; SSR umc1776
2.03
GRMZM2G172795
Forestan, C et al. 2017. BMC Plant Biology 17:161     Reference: October 16th, 2017
Gene Product: October 13th, 2010
Variation: February 14th, 2013
Gene Model: September 22nd, 2011
35 days agosu1 sugary1: endosperm wrinkled and translucent when dry; starch debranching enzyme I absent in developing endosperm, phytoglycogen but no debranching enzyme in germinating seeds; su1-am sugary-amylaceous; su1-st recessive starchy; application: the "sweet corn" gene - recessive kernels are creamy-sweet at milk stage
4.05
   Shuler, S et al. 2017. Crop Sci 56:3068-3074     Reference: October 16th, 2017
Gene Product: April 21st, 2016
Variation: June 6th, 2016
35 days agormr6 required to maintain repression6: Recessive rmr6 plants show reversions of paramutant pl1 and r1recessive changes B' phenotype to dark; like mop1
1.06
GRMZM2G007681
Forestan, C et al. 2017. BMC Plant Biology 17:161     Reference: October 16th, 2017
Gene Product: March 27th, 2013
Variation: March 28th, 2013
Gene Model: March 27th, 2013
35 days agochn2 chitinase2: acidic chitinase I, based on cDNA sequence similarity; Southern blots suggest multiple copies
6.01
   Dowd, P et al. 2017. Agri Gene. doi: 10.1016/j.aggene.2017.10.001     Reference: October 16th, 2017
Gene Product: September 1st, 2003
Variation: September 1st, 2003
35 days agocta1 chitinase A1: cDNA sequence corresponds to peptide sequence of maize 28kDa chitinase A
2.04
   Dowd, P et al. 2017. Agri Gene. doi: 10.1016/j.aggene.2017.10.001     Reference: October 16th, 2017
Gene Product: September 1st, 2003
Variation: September 1st, 2003
35 days agomaf1 MFP1 attachment factor1: cDNA
 
GRMZM2G479245
Forestan, C et al. 2017. BMC Plant Biology 17:161     Reference: October 16th, 2017
Gene Product: September 1st, 2003
Gene Model: June 3rd, 2017
39 days agoccs1 C-type cytochrome synthesis protein1: Ortholog of CCS1. Required for cytb6f assembly. (A. Barkan, 2015)ortholog of Arabidopsis CCS1. Required for cytb6f assembly
1.10
GRMZM2G038301
Belcher, S et al. 2015. Biochem Biophys Acta 1847:1004-1016     Reference: December 1st, 2015
Variation: October 12th, 2017
Gene Model: October 12th, 2017
39 days agorpd3 RPD3 histone deacetylase homolog: cDNA complements yeast rpd3, multiple copy, SSR umc1173.
4.09
GRMZM2G172883
Rossi, V et al. 2007. Plant Cell 19:1145-62     Reference: October 12th, 2017
Gene Product: June 24th, 2005
Variation: November 11th, 2014
Gene Model: November 6th, 2014
39 days agohdt104 histone deacetylase 104:
 
GRMZM5G898314
Garcia-Aguilar, M; Michaud, C; LeBlanc, O; Grimanelli, D. 2010. Plant Cell. 22:3249-3267     Reference: February 9th, 2011
Gene Product: June 24th, 2005
Gene Model: October 12th, 2017
41 days agoaprl1 adenosine 5'-phosphosulfate reductase-like1:
7.03
AC189750.4_FG004
Planta, JR et al. 2017. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.1714805114     Reference: October 9th, 2017
Gene Product: October 10th, 2017
Variation: January 13th, 2016
Gene Model: December 18th, 2015
41 days agoaprl2 adenosine 5'-phosphosulfate reductase-like2:
2.07
GRMZM2G087254
Planta, JR et al. 2017. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.1714805114     Reference: October 9th, 2017
Gene Product: October 10th, 2017
Variation: December 23rd, 2015
Gene Model: December 18th, 2015
41 days agoaprl3 adenosine 5'-phosphosulfate reductase-like3:
4.08
GRMZM2G042582
Houston, N et al. 2005. Plant Physiol 137: 762-778     Reference: February 10th, 2009
Gene Product: October 10th, 2017
Variation: December 31st, 2015
Gene Model: December 18th, 2015
41 days agoaprl4 adenosine 5'-phosphosulfate reductase-like4:
5.07
GRMZM2G159535
Houston, N et al. 2005. Plant Physiol 137: 762-778     Reference: February 10th, 2009
Gene Product: October 10th, 2017
Variation: December 23rd, 2015
Gene Model: December 18th, 2015
41 days agoaprl5 adenosine 5'-phosphosulfate reductase-like5:
1.07
GRMZM2G085249
Houston, N et al. 2005. Plant Physiol 137: 762-778     Reference: February 10th, 2009
Gene Product: October 10th, 2017
Variation: December 23rd, 2015
Gene Model: December 18th, 2015
41 days agoaprl7 adenosine 5'-phosphosulfate reductase-like7:
3.05
GRMZM2G155073
Houston, N et al. 2005. Plant Physiol 137: 762-778     Reference: February 10th, 2009
Gene Product: October 10th, 2017
Variation: December 30th, 2015
Gene Model: December 18th, 2015
41 days agoaprl8 adenosine 5'-phosphosulfate reductase-like8:
1.11
GRMZM2G046231
Houston, N et al. 2005. Plant Physiol 137: 762-778     Reference: February 10th, 2009
Gene Product: October 10th, 2017
Variation: December 23rd, 2015
Gene Model: December 18th, 2015
41 days agoaprl9 adenosine 5'-phosphosulfate reductase-like9:
5.01
GRMZM2G025248
Houston, N et al. 2005. Plant Physiol 137: 762-778     Reference: February 10th, 2009
Gene Product: October 10th, 2017
Variation: January 5th, 2016
Gene Model: December 18th, 2015
41 days agoaprl6 adenosine 5'-phosphosulfate reductase6: member of protein disulfide isomerase family involved in protein folding, but having putative nonisomerase-like activity
10.03
GRMZM2G141848
Houston, N et al. 2005. Plant Physiol 137: 762-778     Reference: February 10th, 2009
Gene Product: October 10th, 2017
Variation: December 23rd, 2015
Gene Model: January 24th, 2015
42 days agocg1 corngrass1: semidominant Cg1 plants have narrow leaves, extreme tilleringCg1 encodes two tandem miR156 genes that are overexpressed in the meristem and lateral organs. George Chuck, 2007
3.02
GRMZM2G022489
Studer, AJ et al. 2017. Genetics 207:755-765     Reference: October 9th, 2017
Gene Product: June 17th, 2016
Variation: August 25th, 2011
Gene Model: April 5th, 2013
Recommended by George Chuck:
September 25th, 2007
42 days agostk2 serine-threonine kinase2: Sequence orthologous to rice stk2, in maize BAC contig overlapping b0178I03 and b0004G18 (Alleman 2006)mutants have reduced pollen transmission
2.04
GRMZM2G179268
Huang, JT et al. 2017. Genetics pp.doi: 10.1534/genetics.117.300358     Reference: October 9th, 2017
Gene Product: May 13th, 2014
Variation: October 9th, 2017
Gene Model: January 9th, 2017
Recommended by Ed Coe:
May 1st, 2007
42 days agopcna2 proliferating cell nuclear antigen2: a cell cycle gene regulated by tb1
4.07
GRMZM2G108712
Studer, AJ et al. 2017. Genetics 207:755-765     Reference: October 9th, 2017
Gene Product: September 1st, 2003
Variation: August 23rd, 2014
Gene Model: August 23rd, 2014
Recommended by Ed Coe:
January 8th, 2008
42 days agogt1 grassy tillers1: numerous basal branches; vegetatively totipotent in combination with id1 and factors for perennialismputative transcription factor that reduces branching, and is induced by shade
1.04
GRMZM2G005624
Studer, AJ et al. 2017. Genetics 207:755-765     Reference: October 9th, 2017
Gene Product: March 5th, 2012
Variation: August 18th, 2011
Gene Model: March 5th, 2012
42 days agoo1 opaque endosperm1: endosperm starch soft, opaque
4.08 - 4.08
GRMZM2G449909
Jia, SG et al. 2017. Methods in Molecular Biology 1676:97-108     Reference: October 9th, 2017
Gene Product: September 1st, 2003
Variation: October 9th, 2017
Gene Model: August 28th, 2012
42 days agotu1 tunicate1: dominant Tu1 ears develop long glumes enclosing individual kernels; tassels develop large, coarse glumes and sex reversal; both inflorescences become grossly vegetative and sterile in homozygotes
4.08 - 4.08
GRMZM2G370777
Studer, AJ et al. 2017. Genetics 207:755-765     Reference: October 9th, 2017
Gene Product: June 12th, 2012
Variation: February 3rd, 2011
Gene Model: May 9th, 2012
42 days agonot1 neighbor of tga1: compared to tga1, expressed much higher in maize than teosinte; INDEL probe (Preston et al 2011)
 
AC233751.1_FG002
Studer, AJ et al. 2017. Genetics 207:755-765     Reference: October 9th, 2017
Gene Product: December 18th, 2014
Variation: May 7th, 2015
Gene Model: October 28th, 2011
42 days agotga1 teosinte glume architecture1: glumes indurated, erect, long, boat-shaped; factor transferred from teosinte
4.05
GRMZM2G101511
Studer, AJ et al. 2017. Genetics 207:755-765     Reference: October 9th, 2017
Gene Product: December 18th, 2014
Variation: May 7th, 2015
Gene Model: October 28th, 2011
42 days agophyB1 phytochromeB1: phyB1 mutants have elongated mesocotyl under red light. Double mutant with phyB2 is pale, narrow with elongated leaf blades, elongated internodes, less anthocyanin in sheath tissues, and earlier flowering time.
1.03
   Studer, AJ et al. 2017. Genetics 207:755-765     Reference: October 9th, 2017
Gene Product: October 24th, 2007
Variation: February 1st, 2015
42 days agozap1 zea apetala homolog1:
2.10
   Studer, AJ et al. 2017. Genetics 207:755-765     Reference: October 9th, 2017
Variation: February 2nd, 2011
42 days agozag1 Zea AGAMOUS homolog1: amino acid sequence, deduced from cDNA to inflorescence mRNA, 61% identical to Arabidopsis floral homeotic gene protein AG1; expression strong in female inflorescence; possibly pt1; SSR umc1187
6.05
   Studer, AJ et al. 2017. Genetics 207:755-765     Reference: October 9th, 2017
Gene Product: September 1st, 2003
Variation: January 2nd, 2015
42 days agozag2 Zea AGAMOUS homolog2: amino acid sequence, deduced from cDNA sequence, has 49% identity to Arabidopsis, floral homeotic gene product; expression restricted to female inflorescence; near ts4
3.05 - 3.05
   Studer, AJ et al. 2017. Genetics 207:755-765     Reference: October 9th, 2017
Gene Product: April 1st, 2011
Variation: October 22nd, 2014
42 days agomcm2 minichromosome maintenance2: a cell cycle gene regulated by tb1
3.05
GRMZM2G112074
Studer, AJ et al. 2017. Genetics 207:755-765   AT4G02060 (TAIR) Reference: October 9th, 2017
Gene Product: August 2nd, 2017
Variation: July 31st, 2017
Gene Model: July 30th, 2017
42 days agoyab12 C2C2-YABBY-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G167824
Studer, AJ et al. 2017. Genetics 207:755-765     Reference: October 9th, 2017
Gene Product: October 16th, 2015
Gene Model: July 3rd, 2012
42 days agostk1 serine threonine kinase1: mutants have reduced pollen transmission
9.02
   Huang, JT et al. 2017. Genetics pp.doi: 10.1534/genetics.117.300358     Reference: October 9th, 2017
Gene Product: May 13th, 2014
Variation: October 9th, 2017
44 days agoacm1 accomplice1:
 
GRMZM2G175065
Lisch, D. 2015. Microbiol Spectr. pp.doi: 10.1128/microbiolspec.MDNA3-0032-2014     Reference: June 25th, 2015
Variation: October 7th, 2017
Gene Model: October 7th, 2017
44 days agonlp15 NLP-transcription factor 15: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.03
GRMZM2G042278
Cao, HR et al. 2017. Frontiers Plant Sci pp.doi: 10.3389/fpls.2017.01703     Reference: October 7th, 2017
Variation: March 31st, 2005
Gene Model: October 7th, 2017
45 days agots4 tasselseed4: encodes miRNA that targets ts6 and sid1; tassel compact silky mass, upright, with pistillate and staminate florets; ear silky and proliferated
3.05 - 3.05
   Xu, DY et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.09.016     Reference: October 6th, 2017
Gene Product: June 17th, 2016
Variation: October 17th, 2014
Recommended by George Chuck:
September 25th, 2007
45 days agogl15 glossy15: glossy leaf surface expressed after 3rd leaf (aka gl4)
9.03
   Xu, DY et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.09.016     Reference: October 6th, 2017
Variation: October 5th, 2012
45 days agodek39 defective kernel39: mutant has flatter appearance and relatively smaller size in endosperms and embryos; encodes a PPR protein of the E subfamily
 
GRMZM2G345128
Li, XJ et al. 2017. J Integr Plant Biol pp.doi: 10.1111/jipb.12602     Reference: October 6th, 2017
Gene Product: December 27th, 2016
Variation: October 6th, 2017
Gene Model: October 6th, 2017
45 days agoemp11 empty pericarp11: encodes a P-type pentatricopeptide repeat (PPR) protein
 
GRMZM2G353301
Ren, XM et al. 2017. J Exp Bot     Reference: October 6th, 2017
Gene Product: December 27th, 2016
Variation: October 6th, 2017
Gene Model: October 6th, 2017
47 days agoms23 male sterile23: pollen mother cells degenerate
8.01 - 8.02
GRMZM2G021276
Liu, YM et al. 2017. Biol Open doi: 10.1242/bio.026393     Reference: October 4th, 2017
Gene Product: September 14th, 2016
Variation: December 4th, 2016
Gene Model: December 4th, 2016
49 days agotar1 tryptophan aminotransferase related1:
6.05
GRMZM2G127160
Zhang, MS et al. 2017. Genes Genom. DOI: 10.1007/s13258-017-0613-9     Reference: October 2nd, 2017
Gene Product: April 30th, 2011
Gene Model: June 4th, 2012
49 days agode18 defective18: Defective kernel: seed weight less than half of normal (B37) (Torti et al. 1984)
10.03
GRMZM2G091819
Zhang, MS et al. 2017. Genes Genom. DOI: 10.1007/s13258-017-0613-9     Reference: October 2nd, 2017
Gene Product: September 12th, 2012
Variation: January 21st, 2016
Gene Model: September 11th, 2012
50 days agoprp3 pathogenesis-related protein3:
4.02
GRMZM2G117989
Bravo, J; Campo, S; Murillo, I; Coca, M; Segundo, BS. 2003. Plant Mol Biol. 52:745-749     Reference: October 15th, 2003
Gene Product: October 1st, 2017
Gene Model: December 24th, 2015
50 days agoprp5 pathogenesis related protein5:
1.06
GRMZM2G402631
Ray, S et al. 2016. Plant Physiol 171:694-706     Reference: July 14th, 2016
Gene Product: October 1st, 2017
Variation: August 20th, 2011
Gene Model: October 30th, 2015
50 days agoprp7 pathogenesis-related protein7:
1.03
GRMZM2G112524
Xie, Y-R et al. 2010. J Plant Physiol 167:121-130     Reference: October 1st, 2017
Gene Product: October 1st, 2017
Gene Model: September 30th, 2017
50 days agoprp4 pathogenesis related protein4:
7.00
GRMZM2G465226
Christensen, SA et al. 2015. Proc Natl Acad Sci, USA 112:11407-11412     Reference: October 30th, 2015
Gene Product: October 1st, 2017
Variation: August 29th, 2011
Gene Model: November 20th, 2014
50 days agoprp6 pathogenesis-related protein6: encoded protein exerted broad spectrum antifungal activity
 
GRMZM2G112488
Xie, Y-R et al. 2010. J Plant Physiol 167:121-130     Reference: October 1st, 2017
Gene Product: October 1st, 2017
Gene Model: September 30th, 2017
55 days agoao3 aldehyde oxidase3: associated with ABA levels in silks of water-stressed plants (Setter et al 2011)
1.11
GRMZM2G019799
Venado, R et al. 2017. Mol Breed pp.doi: 10.1007/s11032-017-0723-8     Reference: September 26th, 2017
Gene Product: February 5th, 2013
Gene Model: February 5th, 2013
55 days agops1 pink scutellum1: (aka vp7, lyc1, lycB) some alleles viviparous; endosperm and scutellum pink, seedling white with pink flush
5.04 - 5.04
   Venado, R et al. 2017. Mol Breed pp.doi: 10.1007/s11032-017-0723-8     Reference: September 26th, 2017
Gene Product: December 10th, 2011
Variation: March 30th, 2011
55 days agovp9 viviparous9: (was y7, z1, zds1) like vp2; vp9-4889 dormant, pale aleurone, pale green seedling
7.02
GRMZM2G454952
Venado, R et al. 2017. Mol Breed pp.doi: 10.1007/s11032-017-0723-8     Reference: September 26th, 2017
Gene Product: December 13th, 2011
Variation: March 25th, 2017
Gene Model: March 8th, 2013
55 days agoy1 yellow endosperm1: reduced carotenoid pigments in endosperm; some alleles affect chlorophyll in seedlings (e.g. y1-8549, y1-pb)
6.01
GRMZM2G300348
Venado, R et al. 2017. Mol Breed pp.doi: 10.1007/s11032-017-0723-8     Reference: September 26th, 2017
Gene Product: December 14th, 2011
Variation: August 26th, 2014
Gene Model: September 22nd, 2011
55 days agoaps1 ATP sulfurylase1:
1.10
GRMZM2G149952
Bolchi, A et al. 1999. Plant Mol Biol 39:527-537     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 26th, 2017
Gene Model: September 26th, 2017
55 days agonced3 nine-cis-epoxycarotenoid dioxygenase3:
 
GRMZM5G858784
Venado, R et al. 2017. Mol Breed pp.doi: 10.1007/s11032-017-0723-8     Reference: September 26th, 2017
Gene Product: September 20th, 2012
Gene Model: September 20th, 2012
55 days agohyd3 hydroxylase3: beta-carotene hydroxylase
 
GRMZM2G152135
Venado, R et al. 2017. Mol Breed pp.doi: 10.1007/s11032-017-0723-8     Reference: September 26th, 2017
Gene Product: December 13th, 2011
Variation: September 3rd, 2011
Gene Model: April 9th, 2013
55 days agohyd4 hydroxylase4: beta-carotene hydroxylase
 
GRMZM2G164318
Venado, R et al. 2017. Mol Breed pp.doi: 10.1007/s11032-017-0723-8     Reference: September 26th, 2017
Gene Product: December 13th, 2011
Variation: September 3rd, 2011
Gene Model: April 9th, 2013
55 days agohds1 hydroxymethylbutenyl diphosphate synthase1:
 
GRMZM2G137409
Venado, R et al. 2017. Mol Breed pp.doi: 10.1007/s11032-017-0723-8     Reference: September 26th, 2017
Gene Product: December 10th, 2011
Gene Model: December 10th, 2011
55 days agohyd7 hydroxylase7: beta-carotene hydroxylase
 
GRMZM2G163683
Venado, R et al. 2017. Mol Breed pp.doi: 10.1007/s11032-017-0723-8     Reference: September 26th, 2017
Gene Product: December 13th, 2011
Variation: February 17th, 2012
Gene Model: April 9th, 2013
55 days agocrti2 carotene isomerase2: encodes carotene isomerase2
 
GRMZM2G106531
Venado, R et al. 2017. Mol Breed pp.doi: 10.1007/s11032-017-0723-8     Reference: September 26th, 2017
Gene Product: December 10th, 2011
Gene Model: April 8th, 2013
55 days agoggps2 geranylgeranyl pyrophosphate synthase2: part of multigene family encoding geranylgeranyl diphosphate synthase
 
GRMZM2G102550
Venado, R et al. 2017. Mol Breed pp.doi: 10.1007/s11032-017-0723-8     Reference: September 26th, 2017
Gene Product: April 8th, 2013
Gene Model: April 8th, 2013
55 days agoippi3 isopentenyl pyrophosphate isomerase3: part of multigene family encoding isopentenyl pyrophosphate isomerase
 
GRMZM2G145029
Venado, R et al. 2017. Mol Breed pp.doi: 10.1007/s11032-017-0723-8     Reference: September 26th, 2017
Gene Product: December 10th, 2011
Gene Model: April 8th, 2013
55 days agocyp15 cytochrome P450 15: encodes CYP97B
 
GRMZM2G010221
Venado, R et al. 2017. Mol Breed pp.doi: 10.1007/s11032-017-0723-8     Reference: September 26th, 2017
Gene Product: April 29th, 2013
Gene Model: April 29th, 2013
55 days agonced4 nine-cis-epoxycarotenoid dioxygenase4:
 
GRMZM2G408158
Venado, R et al. 2017. Mol Breed pp.doi: 10.1007/s11032-017-0723-8     Reference: September 26th, 2017
Gene Product: September 20th, 2012
Gene Model: October 4th, 2014
55 days agonced8 nine-cis-epoxycarotenoid dioxygenase8:
 
GRMZM2G150363
Venado, R et al. 2017. Mol Breed pp.doi: 10.1007/s11032-017-0723-8     Reference: September 26th, 2017
Gene Product: September 20th, 2012
Gene Model: October 4th, 2014
55 days agonced9 nine-cis-epoxycarotenoid dioxygenase9:
 
GRMZM5G838285
Venado, R et al. 2017. Mol Breed pp.doi: 10.1007/s11032-017-0723-8     Reference: September 26th, 2017
Gene Product: September 20th, 2012
Gene Model: October 4th, 2014
55 days agoao4 aldehyde oxidase4:
 
GRMZM2G141473
Venado, R et al. 2017. Mol Breed pp.doi: 10.1007/s11032-017-0723-8     Reference: September 26th, 2017
Gene Product: October 4th, 2014
Gene Model: October 4th, 2014
55 days agohyd8 hydroxylase8:
 
GRMZM5G826824
Venado, R et al. 2017. Mol Breed pp.doi: 10.1007/s11032-017-0723-8     Reference: September 26th, 2017
Gene Product: December 13th, 2011
Gene Model: October 4th, 2014
55 days agoccd7 carotenoid cleavage dioxygenase7:
 
GRMZM2G158657
Venado, R et al. 2017. Mol Breed pp.doi: 10.1007/s11032-017-0723-8   AT2G44990 (TAIR) Reference: September 26th, 2017
Gene Product: September 20th, 2012
Gene Model: October 4th, 2014
55 days agomecs2 methyl erythritol cyclodiphosphate synthase2:
 
AC209374.4_FG002
Venado, R et al. 2017. Mol Breed pp.doi: 10.1007/s11032-017-0723-8     Reference: September 26th, 2017
Gene Product: October 4th, 2014
Gene Model: October 4th, 2014
55 days agoggh1 geranylgeranyl hydrogenase1:
 
GRMZM2G105644
Venado, R et al. 2017. Mol Breed pp.doi: 10.1007/s11032-017-0723-8     Reference: September 26th, 2017
Gene Product: October 4th, 2014
Gene Model: October 4th, 2014
55 days agoggh2 geranylgeranyl hydrogenase2:
 
GRMZM2G419111
Venado, R et al. 2017. Mol Breed pp.doi: 10.1007/s11032-017-0723-8     Reference: September 26th, 2017
Gene Product: October 4th, 2014
Gene Model: October 4th, 2014
55 days agodxs1 deoxy xylulose synthase 1: leaf specific; function inferred from Medicago trunculata gene sequence and expression pattern (Walter 2002)
6.05
GRMZM2G137151
Venado, R et al. 2017. Mol Breed pp.doi: 10.1007/s11032-017-0723-8     Reference: September 26th, 2017
Gene Product: August 17th, 2004
Variation: June 20th, 2012
Gene Model: December 9th, 2011
55 days agodxr1 deoxy xylulose reductoisomerase1: enzyme catalyzes the first committed step of the plastidial pathway to apocarotenoids during mycorrhizal establishment
3.04
GRMZM2G056975
Venado, R et al. 2017. Mol Breed pp.doi: 10.1007/s11032-017-0723-8     Reference: September 26th, 2017
Gene Product: December 10th, 2011
Variation: May 11th, 2005
Gene Model: December 9th, 2011
55 days agoao1 aldehyde oxidase1: functionally cloned (Sekimoto et al 1997)
1.11
GRMZM2G141535
Venado, R et al. 2017. Mol Breed pp.doi: 10.1007/s11032-017-0723-8     Reference: September 26th, 2017
Gene Product: May 2nd, 2012
Variation: May 30th, 2012
Gene Model: October 4th, 2014
55 days agovp14 viviparous14: viviparous; yellow endosperm; abscisic acid biosynthesis; SSR umc1218
1.08
GRMZM2G014392
Venado, R et al. 2017. Mol Breed pp.doi: 10.1007/s11032-017-0723-8     Reference: September 26th, 2017
Gene Product: September 20th, 2012
Variation: June 25th, 2007
Gene Model: May 13th, 2011
56 days agosh1 shrunken1: inflated endosperm collapses on drying, forming smoothly indented kernels; sucrose synthase-sh1 of endosperm (compare sus1 and sus2); homotetramer; SSRs phi028, 044, 033
9.01
   Guan, HY et al. 2017. Plant Growth Regulation pp.DOI: 10.1007/s10725-017-0309-9     Reference: September 21st, 2017
Gene Product: October 25th, 2006
Variation: September 25th, 2017
56 days agoppr78 pentatricopeptide repeat78: mutants have small kernels; nad5 mature mRNA accumulation is dramatically reduced
 
GRMZM2G070381
Zhang, YF et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.09.009     Reference: September 25th, 2017
Gene Product: December 27th, 2016
Variation: September 25th, 2017
Gene Model: September 25th, 2017
56 days agonad5 (mito) NADH dehydrogenase subunit 5:
 
   Zhang, YF et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.09.009     Reference: September 25th, 2017
Gene Product: September 1st, 2003
59 days agoagpll1 ADP glucose pyrophosphorylase large subunit leaf1AGPL4:
1.10
GRMZM2G391936
Huang, B-Q; Hennen-Bierwagen, TA; Myers, AM. 2014. Plant Physiol. 164:596-611     Reference: October 20th, 2014
Gene Product: January 3rd, 2014
Variation: September 22nd, 2017
Gene Model: September 22nd, 2017
59 days agotps21 terpene synthase21: has a role in fungal tolerance; involved in the producation of beta-selinene and beta-costic acid
 
GRMZM2G011151
Ding, YZ et al. 2017. Plant Physiol pp.doi: 10.1104/pp.17.00879     Reference: September 22nd, 2017
Gene Product: May 28th, 2012
Gene Model: September 22nd, 2017
61 days agoa1 anthocyaninless1: colorless aleurone, green or brown plant; brown pericarp with P1-rr
3.09
   Tohge, T et al. 2017. J Exp Bot 68:4013-4028     Reference: September 20th, 2017
Gene Product: April 11th, 2013
Variation: August 25th, 2010
61 days agoa2 anthocyaninless2: like a1, but red pericarp with P1-rr
5.03
   Tohge, T et al. 2017. J Exp Bot 68:4013-4028     Reference: September 20th, 2017
Gene Product: June 7th, 2012
Variation: September 1st, 2003
61 days agobz1 bronze1: modifies purple aleurone and plant color to pale or reddish brown; anthers yellow-fluorescent; allele bz1-m4 = sh1-bz1-m4; SSR phi017NCBI: UDPG-flavonoid 3-oxy glucosyl transferase
9.02
   Tohge, T et al. 2017. J Exp Bot 68:4013-4028     Reference: September 20th, 2017
Gene Product: September 1st, 2003
Variation: June 25th, 2015
61 days agobz2 bronze2: like bz1; anthers not fluorescent; an1-6923 mutation includes deletion for Bz2; encodes a glutathione S-transferase conjugating anthocyanins into the vacuole
1.08
   Tohge, T et al. 2017. J Exp Bot 68:4013-4028     Reference: September 20th, 2017
Gene Product: September 1st, 2003
Variation: March 31st, 2008
61 days agoc1 colored aleurone1: C1 colored; C1-I dominant colorless; c1 colorless, includes c1-p (pigment inducible by light at germination), c1-n (not inducible)
9.01
   Tohge, T et al. 2017. J Exp Bot 68:4013-4028     Reference: September 20th, 2017
Gene Product: June 16th, 2015
Variation: March 27th, 2013
61 days agopr1 red aleurone1: changes purple aleurone to red; encodes flavonoid 3'-hydroxylase
5.05
GRMZM2G025832
Tohge, T et al. 2017. J Exp Bot 68:4013-4028     Reference: September 20th, 2017
Gene Product: June 3rd, 2011
Variation: June 10th, 2011
Gene Model: September 22nd, 2011
61 days agosm2 salmon silk2: like sm1; silks salmon color with P1-rr and P1-wr, brown with P1-ww
2.07
GRMZM2G180283
Tohge, T et al. 2017. J Exp Bot 68:4013-4028     Reference: September 20th, 2017
Gene Product: May 26th, 2016
Variation: May 26th, 2016
Gene Model: May 26th, 2016
61 days agosut1 sucrose transporter1: mutant plants are deficient in leaf sucrose unloading to pholem; mature leaves hyperaccumulate carbohydrates and display leaf chlorosis with premature senescence
1.02
GRMZM2G034302
Julius, BT et al. 2017. Plant Cell Physiol pp.doi: 10.1093/pcp/pcx090     Reference: September 20th, 2017
Gene Product: September 14th, 2013
Variation: April 16th, 2013
Gene Model: April 16th, 2013
61 days agosut2 sucrose transporter2: mutants grow slower and have increased sugar content in leaves
3.04
GRMZM2G307561
Julius, BT et al. 2017. Plant Cell Physiol pp.doi: 10.1093/pcp/pcx090     Reference: September 20th, 2017
Gene Product: September 14th, 2013
Variation: February 20th, 2017
Gene Model: April 17th, 2013
61 days agofls1 flavonol synthase1: partially complements the flavonol deficiency of the Arabidopsis fls1 mutant
 
GRMZM2G152801
Tohge, T et al. 2017. J Exp Bot 68:4013-4028     Reference: September 20th, 2017
Gene Product: October 10th, 2012
Variation: October 9th, 2012
Gene Model: October 9th, 2012
61 days agofls2 flavonol synthase2: Tightly linked tandem duplication of fls1
 
GRMZM2G069298
Tohge, T et al. 2017. J Exp Bot 68:4013-4028     Reference: September 20th, 2017
Gene Product: October 10th, 2012
Gene Model: October 9th, 2012
61 days agotxln1 taxilin1:
 
GRMZM2G015730
Zhang, Nan et al. 2012. PLoS One 7:e43822     Reference: May 23rd, 2013
Gene Product: May 23rd, 2013
Gene Model: September 20th, 2017
61 days agofns1 flavone synthase1:
 
GRMZM2G167336
Tohge, T et al. 2017. J Exp Bot 68:4013-4028     Reference: September 20th, 2017
Gene Product: September 20th, 2017
Gene Model: May 6th, 2016
62 days agoAY110452  :
1.09
GRMZM2G068259
    Variation: July 29th, 2004
Gene Model: September 19th, 2017
63 days agocct1 CO CO-LIKE TIMING OF CAB1 protein domain1: photoperiod response locus; confers later flowering in teosintes under longer day lengths; many maize inbred lines, including some adapted to tropical regions, have cct1 alleles insensitive to photoperiod (Hung et al 2012)
 
GRMZM2G381691
Li, YP et al. 2017. Theor Appl Genet pp.doi: 10.1007/s00122-017-2978-1   AT5G24930 (TAIR)
LOC_Os07g15770 (MSU/TIGR)
Os07g0261200 (Gramene)
Reference: September 18th, 2017
Gene Product: July 17th, 2012
Variation: July 19th, 2017
Gene Model: July 17th, 2012
63 days agodgk1 diacylglycerol kinase1:
1.05
GRMZM2G076911
Gu, YN et al. 2017. J Plant Biochem pp.DOI: 10.1007/s13562-017-0424-8     Reference: September 18th, 2017
Gene Product: September 18th, 2017
Variation: September 18th, 2017
Gene Model: September 18th, 2017
63 days agodgk2 diacylglycerol kinase2:
 
GRMZM2G094452
Gu, YN et al. 2017. J Plant Biochem pp.DOI: 10.1007/s13562-017-0424-8     Reference: September 18th, 2017
Gene Product: September 18th, 2017
Variation: September 18th, 2017
Gene Model: September 18th, 2017
63 days agodgk3 diacylglycerol kinase3:
 
GRMZM2G106578
Gu, YN et al. 2017. J Plant Biochem pp.DOI: 10.1007/s13562-017-0424-8     Reference: September 18th, 2017
Gene Product: September 18th, 2017
Variation: September 18th, 2017
Gene Model: September 18th, 2017
63 days agodgk4 diacylglycerol kinase4:
 
GRMZM2G019562
Gu, YN et al. 2017. J Plant Biochem pp.DOI: 10.1007/s13562-017-0424-8     Reference: September 18th, 2017
Gene Product: September 18th, 2017
Variation: September 18th, 2017
Gene Model: September 18th, 2017
63 days agodgk5 diacylglycerol kinase5:
 
GRMZM5G827286
Gu, YN et al. 2017. J Plant Biochem pp.DOI: 10.1007/s13562-017-0424-8     Reference: September 18th, 2017
Gene Product: September 18th, 2017
Variation: September 18th, 2017
Gene Model: September 18th, 2017
63 days agodgk6 diacylglycerol kinase6:
 
GRMZM2G128214
Gu, YN et al. 2017. J Plant Biochem pp.DOI: 10.1007/s13562-017-0424-8     Reference: September 18th, 2017
Gene Product: September 18th, 2017
Variation: September 18th, 2017
Gene Model: September 18th, 2017
63 days agodgk7 diacylglycerol kinase7:
 
GRMZM2G062429
Gu, YN et al. 2017. J Plant Biochem pp.DOI: 10.1007/s13562-017-0424-8     Reference: September 18th, 2017
Gene Product: September 18th, 2017
Variation: September 18th, 2017
Gene Model: September 18th, 2017
63 days agoics1 isochorismate synthase like1:
7.02
GRMZM2G022837
  AT1G18870 (TAIR)
LOC_Os09g19734 (MSU/TIGR)
Gene Product: January 24th, 2014
Gene Model: September 18th, 2017
65 days agoplt2 phospholipid transfer protein homolog2: amino acid sequence, deduced from coleoptile cDNA; SSR locus umc1010
3.09
   Noonan, J et al. 2017. Int J Mol Sci 8:E1938     Reference: September 16th, 2017
Gene Product: September 1st, 2003
Variation: September 1st, 2003
65 days agoumc1318  :
10.01
GRMZM5G898755
Noonan, J et al. 2017. Int J Mol Sci 8:E1938     Reference: September 16th, 2017
Variation: September 1st, 2003
Gene Model: September 16th, 2017
65 days agoctb1 chitinase B1: cDNA sequence corresponds to protein sequence of maize chitinase B
10.04
GRMZM2G005633
Noonan, J et al. 2017. Int J Mol Sci 8:E1938     Reference: September 16th, 2017
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: June 21st, 2015
65 days agoumc1594  :
3.09
GRMZM2G107839
Noonan, J et al. 2017. Int J Mol Sci 8:E1938     Reference: September 16th, 2017
Variation: September 1st, 2003
Gene Model: September 16th, 2017
65 days agophp20075a(gast)  : NCBI: GAST1 protein
10.01
GRMZM2G172596
Noonan, J et al. 2017. Int J Mol Sci 8:E1938     Reference: September 16th, 2017
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: April 25th, 2017
65 days agoplt1 phospholipid transfer protein homolog1: amino acid sequence, deduced from coleoptile cDNA, homologous to phospholipid transfer proteins
3.06
GRMZM2G127949
Noonan, J et al. 2017. Int J Mol Sci 8:E1938     Reference: September 16th, 2017
Gene Product: September 1st, 2003
Variation: March 17th, 2015
Gene Model: March 6th, 2015
65 days agoctn4 chitinase4:
 
GRMZM2G373106
Noonan, J et al. 2017. Int J Mol Sci 8:E1938     Reference: September 16th, 2017
Gene Product: September 1st, 2003
Gene Model: September 16th, 2017
65 days agoumi11 Ustilago maydis induced11:
7.00
GRMZM2G450866
Noonan, J et al. 2017. Int J Mol Sci 8:E1938     Reference: September 16th, 2017
Gene Product: January 12th, 2015
Variation: January 11th, 2015
Gene Model: January 11th, 2015
67 days agoxer1 xerico1: Over-expression improves water use efficiency and drought tolerance in transgenic maize plants through reduction in ABA8OX proteins stability and ABA degradation.
2.07
GRMZM2G018070
Brugiere, N et al. 2017. Plant Physiol pp.doi: 10.1104/pp.17.01072     Reference: September 14th, 2017
Gene Product: September 14th, 2017
Gene Model: September 14th, 2017
67 days agoxer3 xerico3:
 
GRMZM2G005840
Brugiere, N et al. 2017. Plant Physiol pp.doi: 10.1104/pp.17.01072     Reference: September 14th, 2017
Gene Product: September 14th, 2017
Variation: September 14th, 2017
Gene Model: September 14th, 2017
67 days agoxer2 xerico2:
 
GRMZM2G393349
Brugiere, N et al. 2017. Plant Physiol pp.doi: 10.1104/pp.17.01072     Reference: September 14th, 2017
Gene Product: September 14th, 2017
Gene Model: September 14th, 2017
67 days agoxer4 xerico4:
 
GRMZM2G029623
Brugiere, N et al. 2017. Plant Physiol pp.doi: 10.1104/pp.17.01072     Reference: September 14th, 2017
Gene Product: September 14th, 2017
Gene Model: September 14th, 2017
68 days agophos3 phosphate transporter3:
 
GRMZM5G872499
Salazar, MN. 2017. Zm00001d018445 structure   LOC_Os02g56510 (MSU/TIGR) Reference: September 13th, 2017
Gene Product: February 27th, 2016
Variation: September 13th, 2017
Gene Model: September 13th, 2017
69 days agokch6 potassium channel6:
8.03
AC234152.1_FG007
Philippar, K et al. 1999. Proc Natl Acad Sci, USA 96:12186-12191     Reference: October 20th, 2008
Gene Product: February 20th, 2008
Variation: April 14th, 2017
Gene Model: September 12th, 2017
69 days agokch7 potassium channel7:
 
GRMZM2G178356
Gao, Y-Q et al. 2017. Plant J pp.doi: 10.1111/tpj.13712     Reference: September 12th, 2017
Gene Product: February 20th, 2008
Variation: September 12th, 2017
Gene Model: September 12th, 2017
69 days agokch8 potassium channel8:
 
GRMZM5G838773
Gao, Y-Q et al. 2017. Plant J pp.doi: 10.1111/tpj.13712     Reference: September 12th, 2017
Gene Product: February 20th, 2008
Gene Model: September 12th, 2017
69 days agokch4 potassium channel4:
3.02
GRMZM2G093313
Gao, Y-Q et al. 2017. Plant J pp.doi: 10.1111/tpj.13712     Reference: September 12th, 2017
Gene Product: February 20th, 2008
Variation: February 20th, 2008
Gene Model: April 22nd, 2011
69 days agokch3 potassium channel3: single copy (Southern blot), function confirmed by expression in Xenopus oocytes (Philippar 2003; Su 2005)
2.06
GRMZM2G081666
Gao, Y-Q et al. 2017. Plant J pp.doi: 10.1111/tpj.13712     Reference: September 12th, 2017
Gene Product: February 20th, 2008
Variation: April 22nd, 2011
Gene Model: April 22nd, 2011
70 days agonpf2 nitrate transporter/peptide transporter family2: encodes a a pH dependent non-biphasic high-affinity nitrate-specific transport protein
 
GRMZM2G161459
Wen, ZY et al. 2017. Plant Cell pp.doi: 10.1105/tpc.16.00724   AT1G12110 (TAIR) Reference: September 11th, 2017
Gene Product: September 1st, 2003
Variation: September 11th, 2017
Gene Model: September 11th, 2017
70 days agonpf1 nitrate transporter/peptide transporter family1: encodes a low-affinity nitrate transporter with efflux activity; switches to a high-affinity chloride selective transporter, when supplied chloride.
10.03
GRMZM2G086496
Wen, ZY et al. 2017. Plant Cell pp.doi: 10.1105/tpc.16.00724   AT1G12110 (TAIR) Reference: September 11th, 2017
Gene Product: September 1st, 2003
Variation: September 11th, 2017
Gene Model: September 11th, 2017
73 days agouce3 ubiquitin conjugating enzyme3:
1.01
GRMZM2G070047
Wills, DM et al. 2017. J Hered pp.doi: 10.1093/jhered/esx073     Reference: September 8th, 2017
Gene Product: September 1st, 2003
Variation: February 15th, 2015
Gene Model: February 16th, 2015
73 days agoscmv1 resistance to sugarcane mosaic virus1: resistance requires dominant factors Scm1 and Scm2; resistance in various inbreds is concordant for SCMV and MDMV, yet recombinants of Scm1 occur with the NOR, whereas none were found for Mdm1 by Simcox et al. (1995)
6.00 - 6.01
GRMZM2G014055
Liu, Q et al. 2017. Molecular Plant 10:483-497     Reference: September 8th, 2017
Gene Product: September 1st, 2003
Variation: June 29th, 2005
Gene Model: September 7th, 2017
73 days agozag6 agamous-like6: Encodes a MADS-box transcription factor homologous to SUPPRESSOR OF OVEREXPRESSION OF CONSTANS 1 that affects flowering time in Arabidopsis.
 
GRMZM2G026223
Wills, DM et al. 2017. J Hered pp.doi: 10.1093/jhered/esx073     Reference: September 8th, 2017
Variation: June 9th, 2014
Gene Model: June 9th, 2014
73 days agobx12 benzoxazinone synthesis12:
 
GRMZM2G023325
Gaillard, MDP et al. 2017. New Phytol pp.doi: 10.1111/nph.14757     Reference: September 8th, 2017
Gene Product: July 8th, 2013
Variation: July 8th, 2013
Gene Model: July 8th, 2013
73 days agofnsi2 flavone synthase typeI2: Encodes a flavone synthase that is of the soluble Fe2+/2- oxoglutarate-dependent dioxygenase class
 
GRMZM2G475380
Wills, DM et al. 2017. J Hered pp.doi: 10.1093/jhered/esx073   AT5G24530 (TAIR) Reference: September 8th, 2017
Gene Product: August 15th, 2015
Gene Model: August 14th, 2015
74 days agoabp1 auxin binding protein1: putative auxin receptor, single band in Southerns, endoplasmic reticulum and plasma membrane locales (aka axr1, aux311)Dominant Scmv1 and Scmv2 confer resistance
3.05 - 3.05
   Leng, PF, et al. 2017. Molecular Plant. 0:doi: 10.1016/j.molp.2017.07.013     Reference: September 7th, 2017
Gene Product: September 1st, 2003
Variation: August 23rd, 2017
74 days agoago18b argonaute18b: mutant affects length of central tassel branch
1.08
GRMZM2G457370
Sun, W et al. 2017. J Integr Plant Biol pp.doi: 10.1111/jipb.12596     Reference: September 7th, 2017
Gene Product: August 12th, 2016
Variation: September 7th, 2017
Gene Model: August 12th, 2016
74 days agofbxl1 F-box domain and LRR containing protein1: encodes an F-box domain and a leucine-rich-repeat domain protein
 
GRMZM2G481291
Yang, Q, et al. 2017. Nature Genetics. 0:doi: 10.1038/ng.3919     Reference: September 7th, 2017
Gene Product: July 25th, 2017
Variation: July 25th, 2017
Gene Model: July 25th, 2017
74 days agorlk1 receptor-like protein kinase1: encodes an S-locus receptor-like protein kinase;
 
GRMZM2G099324
Yang, Q, et al. 2017. Nature Genetics. 0:doi: 10.1038/ng.3919     Reference: September 7th, 2017
Gene Product: July 1st, 2015
Variation: July 25th, 2017
Gene Model: July 25th, 2017
74 days agopipf1 Ping-Pong family plant transposase1: encodes a PIF/Ping-Pong family plant transposase
 
GRMZM2G440198
Yang, Q, et al. 2017. Nature Genetics. 0:doi: 10.1038/ng.3919     Reference: September 7th, 2017
Gene Product: July 25th, 2017
Variation: July 25th, 2017
Gene Model: July 25th, 2017
75 days agomgt10 magnesium transporter10: encodes CorA/MRS2/MGT-type magnesium transporter
 
GRMZM2G018706
Li, HY et al. 2017. Plant Mol Biol pp.doi: 10.1007/s11103-017-0645-1     Reference: September 6th, 2017
Gene Product: April 18th, 2016
Gene Model: April 18th, 2016
75 days agobzip127 bZIP-transcription factor 127: similar to Arabidopsis basic leucine zipper transcription factor-like protein (NCBI)Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.06
GRMZM2G175280
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 6th, 2017
Gene Model: September 6th, 2017
76 days agolfy1 leafy1: dominant Lfy1 plants have increased number of leaves above ear
 
   Cui, M et al. 2017. Frontiers Plant Sci 8:1437     Reference: September 5th, 2017
Variation: September 24th, 2015
76 days agowox11 WUSCHEL-related homeobox transcription factor 11:
 
   Zhao Y et al. 2009. Plant Cell. 21:736-48     Reference: September 5th, 2017
Gene Product: August 25th, 2017
79 days agowrky105 WRKY-transcription factor 105: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Cai, RH et al. 2017. Planta pp.doi: 10.1007/s00425-017-2766-9     Reference: September 2nd, 2017
Variation: September 2nd, 2017
80 days agoras11G1 ras-related protein11G1:
 
AC197246.3_FG001
Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141     Reference: January 12th, 2011
Variation: January 24th, 2011
Gene Model: September 1st, 2017
84 days agohxa102 histone acetyltransferase complex component102:
 
GRMZM5G815323
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: August 28th, 2017
Variation: August 28th, 2017
Gene Model: August 28th, 2017
87 days agons2 narrow sheath2: embryonic transcription factor; duplicate factor with ns1; closely related to 2 other WOX3 genes, wox3a and wox3b, aka hb82, hb16 (Grassius named)
4.08
   Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484     Reference: August 15th, 2017
Gene Product: August 25th, 2017
Variation: June 29th, 2005
87 days agowox9c WUSCHEL related homeobox 9c: late embryo in outer layer of suspensor through leaf 4 stage
 
GRMZM2G409881
Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484     Reference: August 15th, 2017
Gene Product: August 25th, 2017
Variation: September 6th, 2007
Gene Model: December 21st, 2015
87 days agowox9b WUSCHEL related homeobox 9b: expressed in late embryo stages;in suspensor and also, unlike wox9c, in the shoot apical meristem (SAM)
 
GRMZM2G031882
Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484     Reference: August 15th, 2017
Gene Product: August 25th, 2017
Variation: September 6th, 2007
Gene Model: December 21st, 2015
87 days agobnlg2057  :
1.06
GRMZM2G017629
    Variation: September 1st, 2003
Gene Model: August 25th, 2017
87 days agobnl5.59a  : Tests with B-A translocation stocks indicated that the probe does not map to 1L, 1S, 4L, 7L, or 9L and 6L gave false positives.
1.06
GRMZM2G113840
Grant, D et al. 1993. MNL 67:55-61     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: August 25th, 2017
87 days agoarr6 ARR-B-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pan, QC et al. 2017. Plant Physiol pp.DOI: 10.1104/pp.17.00709     Reference: August 25th, 2017
Gene Product: June 30th, 2017
87 days agowox13b WUSCHEL-related homeobox transcription factor 13b:
 
   Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484     Reference: August 15th, 2017
Gene Product: August 25th, 2017
87 days agowox13a WUSCHEL-related homeobox-transcription factor 13a:
 
   Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484     Reference: August 15th, 2017
Gene Product: August 25th, 2017
87 days agohb122 Homeobox-transcription factor 122: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Lowe, KS et al. 2016. Plant Cell pp.10.1105/tpc.16.00124     Reference: October 1st, 2016
Gene Product: August 25th, 2017
87 days agowox3b WUSCHEL-related homeobox 3b: embryonic transcription factor of wox3 gene family, which also includes ns1, ns2, and wox3a. Expression of of all is similar, except wox3a, wox3b are expressed in the shoot apical meristem, unlike ns1 or ns2 (Nardmann et al 2007).
 
   Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484     Reference: August 15th, 2017
Gene Product: August 25th, 2017
87 days agowox5a WUSCHEL-homeobox-transcription factor 5A: embryonic WUSCHEL homeobox transcription factor (Nardmann et al 2007)
 
   Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484     Reference: August 15th, 2017
Gene Product: August 25th, 2017
87 days agowox5b WUSCHEL-homeobox-transcription factor 5b: embryonic transcription factor (Nardmann et al 2007)
 
   Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484     Reference: August 15th, 2017
Gene Product: August 25th, 2017
87 days agohb67 Homeobox-transcription factor 67: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Somssich, M et al. 2016. Development pp.doi: 10.1242/dev.133645     Reference: September 15th, 2016
Gene Product: August 25th, 2017
87 days agowox3a WUSCHEL homeobox 3A: embryonic transcription factor; expression in embryonic leaf similar to wox3b, but distinct from ns1/ns2 also in the wox3 gene family (Nardmann et al 2007)
 
   Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484     Reference: August 15th, 2017
Gene Product: August 25th, 2017
Variation: August 24th, 2017
87 days agowox2b WUSCHEL-related homeobox 2b:
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: August 25th, 2017
87 days agowox2a WUSCHEL-related homeobox 2a`: embryonic transcription factor (Nardmann et al 2007)
 
   Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484     Reference: August 15th, 2017
Gene Product: August 25th, 2017
87 days agons1 narrow sheath1: plant brachytic, duplicate factor with ns2; leaf sheath and blade taper, blade widens toward tip; husks narrowed, ears exposed
2.05
   Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484     Reference: August 15th, 2017
Gene Product: August 25th, 2017
Variation: February 20th, 2015
87 days agowox9a WUSCHEL related homeobox 9a: embryonic transcription factor (Nardmann et al 2007)
 
GRMZM2G133972
Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484     Reference: August 15th, 2017
Gene Product: August 25th, 2017
Variation: January 31st, 2011
Gene Model: December 21st, 2015
87 days agowox4 wuschel-related homeobox4: embryonic WUSCHEL homeobox transcription factor specific to hypocotyl vascular system Nardmann et al 207
 
   Nardmann, J et al. 2007. Mol Biol Evol 24:2474-2484     Reference: August 15th, 2017
Gene Product: August 25th, 2017
Variation: May 1st, 2016
87 days agowox12a wuschel-related homeobox12A: cDNA ortholog of Arabidopsis wuschel-related homeobox gene
 
   Nardmann, J; Werr, W. 2006. Molecular biology and evolution. 23:2492-2504     Reference: November 6th, 2006
Gene Product: August 25th, 2017
87 days agoIDP1951  :
1.06
GRMZM2G113726
    Variation: March 31st, 2005
Gene Model: August 25th, 2017
88 days agomyb63 MYB-transcription factor 63: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.08
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 25th, 2017
Variation: August 24th, 2017
88 days agomyb164 MYB-transcription factor 164: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 25th, 2017
Variation: August 24th, 2017
88 days agocenH3 centromeric histone H3:
6.06
GRMZM2G158526
Zhao, H et al. 2017. Chromosome Res pp.doi: 10.1007/s10577-017-9564-x     Reference: August 24th, 2017
Gene Product: December 24th, 2015
Variation: November 7th, 2012
Gene Model: October 24th, 2011
89 days agouce8 ubiquitin conjugating enzyme8:
5.03
GRMZM2G146374
    Gene Product: September 1st, 2003
Variation: August 23rd, 2017
Gene Model: August 23rd, 2017
89 days agouce1 ubiquitin conjugating enzyme1: endosperm cDNA 2C06C11 (uaz102), similar to plant ubiquitin conjugating enzymes
1.08
GRMZM2G053764
Helentjaris, T et al. 1994. MNL 68:101-104     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: August 23rd, 2017
Gene Model: July 7th, 2017
89 days agouce6 ubiquitin conjugating enzyme6:
 
GRMZM2G018447
    Gene Product: September 1st, 2003
Variation: August 23rd, 2017
Gene Model: July 7th, 2017
89 days agouce7 ubiquitin conjugating enzyme7:
 
GRMZM2G053764
    Gene Product: September 1st, 2003
Variation: August 23rd, 2017
Gene Model: August 23rd, 2017
90 days agoarftf25 ARF-transcription factor 25: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.06
GRMZM2G116557
Chen, Q et al. 2017. Frontiers Plant Sci 8:1355     Reference: August 22nd, 2017
Variation: August 22nd, 2017
Gene Model: August 22nd, 2017
90 days agogun1 genomes uncoupled1: ortholog of Arabidopsis GUN1 (At2g31400) pentatricopeptide repeat-containing protein, chloroplastic-like
1.05
GRMZM2G432850
  AT2G31400 (TAIR) Gene Product: December 27th, 2016
Gene Model: August 22nd, 2017
3 months agowrky111 WRKY-transcription factor 111: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Hu, SL et al. 2017. Plant Sci 263:132-141     Reference: August 19th, 2017
Gene Product: July 24th, 2017
Variation: July 24th, 2017
3 months agovt2 vanishing tassel2: inflorescence development; TRP-depenedent auxin synthesis
 
GRMZM2G127308
Poulet, A; Kriechbaumer, V. 2017. Int J Mol Sci 18:1791   AT1G70560 (TAIR) Reference: August 19th, 2017
Gene Product: April 30th, 2011
Variation: June 24th, 2011
Gene Model: May 2nd, 2012
3 months agoyuc2 Yucca2:
 
GRMZM2G159393
Poulet, A; Kriechbaumer, V. 2017. Int J Mol Sci 18:1791     Reference: August 19th, 2017
Gene Product: September 12th, 2012
Gene Model: September 12th, 2012
3 months agoyuc4 Yucca4: up-regulated by light irradiation in the 0-1mm tip region
 
GRMZM2G141383
Poulet, A; Kriechbaumer, V. 2017. Int J Mol Sci 18:1791     Reference: August 19th, 2017
Gene Product: September 12th, 2012
Gene Model: June 17th, 2016
3 months agoyuc7 yucca7:
 
GRMZM2G480386
Poulet, A; Kriechbaumer, V. 2017. Int J Mol Sci 18:1791     Reference: August 19th, 2017
Gene Product: September 12th, 2012
Gene Model: August 19th, 2017
3 months agoyuc8 yucca8:
 
GRMZM2G017193
Poulet, A; Kriechbaumer, V. 2017. Int J Mol Sci 18:1791     Reference: August 19th, 2017
Gene Product: September 12th, 2012
Gene Model: August 19th, 2017
3 months agoyuc9 yucca9:
 
GRMZM2G333478
Poulet, A; Kriechbaumer, V. 2017. Int J Mol Sci 18:1791     Reference: August 19th, 2017
Gene Product: September 12th, 2012
Gene Model: August 19th, 2017
3 months agotar2 tryptophan aminotransferase related2:
 
GRMZM2G066345
Poulet, A; Kriechbaumer, V. 2017. Int J Mol Sci 18:1791     Reference: August 19th, 2017
Gene Product: April 30th, 2011
Gene Model: August 19th, 2017
3 months agotar3 tryptophan aminotransferase related3:
6.05
GRMZM2G141810
Poulet, A; Kriechbaumer, V. 2017. Int J Mol Sci 18:1791     Reference: August 19th, 2017
Gene Product: April 30th, 2011
Gene Model: August 22nd, 2013
3 months agoyuc5 Yucca5: transcribed in the root apex (0-5mm)
7.02
GRMZM2G132489
Poulet, A; Kriechbaumer, V. 2017. Int J Mol Sci 18:1791     Reference: August 19th, 2017
Gene Product: September 12th, 2012
Gene Model: June 17th, 2016
3 months agozrp2 Zea root protein2: cDNA expressed in roots and stems
1.07
GRMZM2G106980
Gan, D et al. 2011. Mol Biol Rep 38:4553-4563     Reference: August 18th, 2017
Gene Product: August 18th, 2017
Variation: August 18th, 2017
Gene Model: July 28th, 2016
3 months agoburp8 BURP domain-containing protein-RD22-like8:
4.05
GRMZM2G147756
Gan, D et al. 2011. Mol Biol Rep 38:4553-4563     Reference: August 18th, 2017
Gene Product: August 18th, 2017
Variation: August 18th, 2017
Gene Model: August 18th, 2017
3 months agopop1 putative organelle permease1 :
 
GRMZM2G078154
    Variation: August 18th, 2017
Gene Model: August 18th, 2017
3 months agoburp1 BURP domain-containing protein-RD22-like1: Water deficit caused an 18-fold increase in the expression; expression is not influenced by ABA
 
GRMZM2G446170
Phillips, K; Ludidi, N. 2017. Sci. Rep. 7:8821     Reference: August 18th, 2017
Gene Product: August 18th, 2017
Variation: August 18th, 2017
Gene Model: August 18th, 2017
3 months agoburp2 BURP domain-containing protein-RD22-like2: Water deficit caused a 1.6-fold increase in the expression; expression up-regulated by ABA.
 
GRMZM5G800586
Phillips, K; Ludidi, N. 2017. Sci. Rep. 7:8821     Reference: August 18th, 2017
Gene Product: August 18th, 2017
Variation: August 18th, 2017
Gene Model: August 18th, 2017
3 months agoburp3 BURP domain-containing protein-RD22-like3:
 
GRMZM2G032145
Gan, D et al. 2011. Mol Biol Rep 38:4553-4563     Reference: August 18th, 2017
Gene Product: August 18th, 2017
Variation: August 18th, 2017
Gene Model: August 18th, 2017
3 months agoburp5 BURP domain-containing protein-RD22-like5:
 
GRMZM2G108422
Gan, D et al. 2011. Mol Biol Rep 38:4553-4563     Reference: August 18th, 2017
Gene Product: August 18th, 2017
Gene Model: August 18th, 2017
3 months agoburp6 BURP domain-containing protein-RD22-like6:
 
GRMZM2G113229
Gan, D et al. 2011. Mol Biol Rep 38:4553-4563     Reference: August 18th, 2017
Gene Product: August 18th, 2017
Variation: August 18th, 2017
Gene Model: August 18th, 2017
3 months agoburp7 BURP domain-containing protein-RD22-like7:
 
GRMZM2G146665
Gan, D et al. 2011. Mol Biol Rep 38:4553-4563     Reference: August 18th, 2017
Gene Product: August 18th, 2017
Gene Model: August 18th, 2017
3 months agoburp9 BURP domain-containing protein-RD22-like9:
 
GRMZM2G406170
Gan, D et al. 2011. Mol Biol Rep 38:4553-4563     Reference: August 18th, 2017
Gene Product: August 18th, 2017
Variation: August 18th, 2017
Gene Model: August 18th, 2017
3 months agoburp4 BURP domain-containing protein-RD22-like4:
7.03
GRMZM2G078779
Gan, D et al. 2011. Mol Biol Rep 38:4553-4563     Reference: August 18th, 2017
Gene Product: August 18th, 2017
Variation: August 18th, 2017
Gene Model: August 18th, 2017
3 months agocsu323  : similar to Arabidopsis 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
1.04
GRMZM2G036543
Baysdorfer, C. 1996. Nucleotide sequence submission to dbEST     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: August 17th, 2017
3 months agoumc1297  : similar to Arabidopsis haloacid dehalogenase-like hydrolase domain-containing protein
1.05
GRMZM2G086869
    Variation: October 12th, 2016
Gene Model: August 17th, 2017
3 months agoincw1 cell wall invertase1: full-length cDNA, similar to tobacco and carrot cell-wall invertase; Northerns specific to cell suspension and developing endosperm 28-32 DAP; expressed protein cross-reacts with antibodies to carrot cell-wall invertase; low copy number
5.04
   Liu, J et al. 2017. Plant Physiol pp.DOI: 10.1104/pp.17.00708     Reference: August 16th, 2017
Gene Product: January 14th, 2013
Variation: May 27th, 2015
3 months agomn1 miniature seed1: small, somewhat defective kernel, fully viable; invertase reduced
2.04
   Liu, J et al. 2017. Plant Physiol pp.DOI: 10.1104/pp.17.00708     Reference: August 16th, 2017
Gene Product: January 14th, 2013
Variation: April 13th, 2015
3 months agocsu452  :
1.04
GRMZM2G077897
    Variation: September 1st, 2003
Gene Model: August 16th, 2017
3 months agoles22 lesion22: (was Les*-J2552, les29) dominant leaf lesions,early-medium timing, small size, white color; porphyria
1.04
GRMZM2G044074
Mei, Y et al. 2016. Plant Physiol pp.DOI: 10.1104/pp.16.00172     Reference: May 3rd, 2016
Gene Product: September 1st, 2003
Variation: April 1st, 2015
Gene Model: August 16th, 2017
3 months agoumc1103  :
7.04
GRMZM2G414043
Liu, J et al. 2017. Plant Physiol pp.DOI: 10.1104/pp.17.00708     Reference: August 16th, 2017
Variation: August 16th, 2017
Gene Model: August 16th, 2017
3 months agosbp13 SBP-transcription factor 13: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Liu, J et al. 2017. Plant Physiol pp.DOI: 10.1104/pp.17.00708     Reference: August 16th, 2017
Gene Product: December 18th, 2014
3 months agohct12 hydroxycinnamoyltransferase12:
 
GRMZM2G179703
Liu, J et al. 2017. Plant Physiol pp.DOI: 10.1104/pp.17.00708     Reference: August 16th, 2017
Gene Product: November 7th, 2015
Gene Model: May 18th, 2016
3 months agodek36 defective kernel36: mutant kernels have a small and collapsed appearance at maturity, with a drastic size reduction in both embryo and endosperm; encodes an E+ subgroup PPR protein
 
GRMZM5G892151
Liu, J et al. 2017. Plant Physiol pp.DOI: 10.1104/pp.17.00708   At4g21300 (TAIR) Reference: August 16th, 2017
Gene Product: December 27th, 2016
Variation: March 13th, 2017
Gene Model: March 13th, 2017
3 months agoincw5 invertase cell wall5:
 
GRMZM2G095725
Liu, J et al. 2017. Plant Physiol pp.DOI: 10.1104/pp.17.00708   LOC_Os04g33740 (MSU/TIGR) Reference: August 16th, 2017
Gene Product: January 14th, 2013
Variation: August 16th, 2017
Gene Model: August 16th, 2017
3 months agosyd1 splayed ATPase1:
6.05
GRMZM2G467799
Nelissen, H et al. 2015. Plant Cell pp.doi: 10.1105/tpc.15.00269     Reference: July 2nd, 2015
Variation: September 1st, 2003
Gene Model: August 15th, 2017
3 months agoatg13c autophagy13c:
2.03
GRMZM5G825909
Li, F et al. 2015. Plant Cell 27:1389-1408     Reference: August 15th, 2017
Variation: July 29th, 2004
Gene Model: August 15th, 2017
3 months agopik1 phosphatidylinositol 3-kinase1:
4.05
   Li, F et al. 2015. Plant Cell 27:1389-1408     Reference: August 15th, 2017
Gene Product: September 1st, 2003
Variation: September 25th, 2007
3 months agoatg12 autophagy12: Mutants are phenotypically normal and fertile when grown under nutrient-rich conditions. However, when nitrogen-starved, seedling growth is severely arrested, and as the plants mature, they show enhanced leaf senescence and stunted ear development.
 
GRMZM5G842517
Li, F et al. 2015. Plant Cell 27:1389-1408     Reference: August 15th, 2017
Variation: August 15th, 2017
Gene Model: August 15th, 2017
3 months agovps2 vacuolar protein sorting2:
 
GRMZM2G179662
Li, F et al. 2015. Plant Cell 27:1389-1408     Reference: August 15th, 2017
Gene Product: August 15th, 2017
Gene Model: August 15th, 2017
3 months agoatg8b autophagy8b:
10.06
GRMZM2G419694
Li, F et al. 2015. Plant Cell 27:1389-1408     Reference: August 15th, 2017
Variation: March 31st, 2005
Gene Model: August 15th, 2017
3 months agoatg16L autophagy16L:
1.10
GRMZM2G078252
Li, F et al. 2015. Plant Cell 27:1389-1408     Reference: August 15th, 2017
Variation: August 15th, 2017
Gene Model: August 15th, 2017
3 months agozmm14 Zea mays MADS14: during spikelet development zmm4 probably works as a selector gene which is involved in distinguishing the upper and lower floret
1.02
GRMZM2G099522
Li, YX, et al. 2016. Plant J. 86:391-402     Reference: November 3rd, 2016
Variation: August 28th, 2013
Gene Model: August 14th, 2017
3 months agodhar2 dehydroascorbate reductase like2:
 
GRMZM2G005710
    Gene Product: March 28th, 2013
Gene Model: August 14th, 2017
3 months agoc2 colorless2: colorless aleurone, reduced plant and cob color; C2-Idf dominant inhibitor; duplicate factor with whp1 for pollen color and for anthocyanins
4.08
   Eloy, NB et al. 2016. Plant Physiol 173:998-1016     Reference: August 10th, 2017
Gene Product: September 1st, 2003
Variation: November 14th, 2013
3 months agoAY110435  :
6.05
AC204292.4_FG006
    Variation: July 29th, 2004
Gene Model: August 10th, 2017
3 months agoIDPC175  : Sequence shows similarity to Arabidopsis HSP18.2
1.03
GRMZM2G481529
    Variation: August 8th, 2017
Gene Model: August 8th, 2017
3 months agobnlg1953  : similar to Arabidopsis C2H2-like zinc finger protein
1.02
GRMZM2G171073
    Variation: September 1st, 2003
Gene Model: August 8th, 2017
3 months agodng1 DNA glycosylase superfamily protein1:
1.02
GRMZM2G005844
    Variation: August 8th, 2017
Gene Model: July 11th, 2017
3 months agommp66  : Similar to Arabidopsis and Medicago trunculata Phosphatidylinositol-4-phosphate 5-kinase
1.03
GRMZM2G073591
    Variation: August 8th, 2017
Gene Model: August 8th, 2017
3 months agorte1 rotten ear1: mutants show distinct defects in vegetative and reproductive development, eventually causing widespread sterility in its tassel and ear.
1.05
GRMZM2G166159
Chatterjee, M et al. 2017. Genetics 206:2041-2051     Reference: August 8th, 2017
Gene Product: June 24th, 2017
Variation: July 21st, 2014
Gene Model: July 19th, 2014
3 months agorte2 rotten ear2: mutants strongly enhance the phenotype of rte1 mutants in soils with low boron content, producing shorter plants that fail to form all reproductive structures
 
GRMZM2G082203
Chatterjee, M et al. 2017. Genetics 206:2041-2051     Reference: August 8th, 2017
Gene Product: June 24th, 2017
Variation: June 24th, 2017
Gene Model: June 24th, 2017
3 months agorte3 rotten ear3: phylogenetically related to Class II clade boron transporters
 
GRMZM2G051753
Chatterjee, M et al. 2017. Genetics 206:2041-2051     Reference: August 8th, 2017
Gene Product: June 24th, 2017
Variation: June 24th, 2017
Gene Model: June 24th, 2017
3 months agorte4 rotten ear4: phylogenetically related to Class II clade boron transporters
 
GRMZM2G374989
Chatterjee, M et al. 2017. Genetics 206:2041-2051     Reference: August 8th, 2017
Gene Product: June 24th, 2017
Gene Model: June 24th, 2017
3 months agorte5 rotten ear5: phylogenetically related to Class II clade boron transporters
 
GRMZM2G302559
Chatterjee, M et al. 2017. Genetics 206:2041-2051     Reference: August 8th, 2017
Gene Product: June 24th, 2017
Gene Model: June 24th, 2017
3 months agorte6 rotten ear6: phylogenetically related to Class II clade boron transporters
 
GRMZM2G454327
Chatterjee, M et al. 2017. Genetics 206:2041-2051     Reference: August 8th, 2017
Gene Product: June 24th, 2017
Gene Model: June 24th, 2017
3 months agodhn13 dehydrin13:
1.09
GRMZM2G169372
Liu, Y et al. 2017. Sci. Rep. 7:7361     Reference: August 5th, 2017
Gene Product: August 5th, 2017
Variation: October 13th, 2016
Gene Model: October 14th, 2016
3 months agodhn6 dehydrin6:
3.07
GRMZM2G031308
Chen, J et al. 2002. Unpublished submission to Genbank Jan 2002     Reference: July 15th, 2008
Gene Product: August 5th, 2017
Variation: February 9th, 2014
Gene Model: July 27th, 2016
3 months agorps15 ribosomal proteinS15: cDNA sequences, SSR umc1564
5.02
GRMZM5G869564
    Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: August 5th, 2017
3 months agodhn3 dehydrin3:
4.06
GRMZM2G373522
    Gene Product: August 5th, 2017
Variation: June 18th, 2011
Gene Model: October 16th, 2016
3 months agodhn7 dehydrin7:
 
GRMZM2G002786
Alexandrov, NN, et al. 2009. Plant Mol Biol. 69:179-194     Reference: January 11th, 2009
Gene Product: August 5th, 2017
Variation: February 9th, 2014
Gene Model: July 27th, 2016
3 months agostk4 serine-threonine kinase4: Expression responds to available phosphate, and its expression up-regulated under phosphate starvation.
 
GRMZM2G156013
Azad, I; Alemzadeh, A. 2017. Molecular Cell Biology Research Communications 6:65-75     Reference: August 5th, 2017
Gene Product: May 13th, 2014
Variation: August 5th, 2017
Gene Model: August 5th, 2017
3 months agodhn14 dehydrin14:
 
GRMZM2G448511
Liu, Y et al. 2017. Sci. Rep. 7:7361     Reference: August 5th, 2017
Gene Product: August 5th, 2017
Gene Model: August 5th, 2017
3 months agorpe1 Ribulose-phosphate 3-epimerase1:
1.02
       Variation: August 4th, 2017
3 months agommp135  : similar to Arabidopsis no pollen germination related 1
1.02
GRMZM2G015219
    Variation: August 4th, 2017
Gene Model: August 4th, 2017
3 months agoras11E1 ras-related protein11E1:
 
GRMZM2G164527
    Variation: January 24th, 2011
Gene Model: August 4th, 2017
3 months agoroa1 replication origin activator1: cDNA Z29368, homology with yeast and vertebrate DNA licensing activity; orthologs in barley and Arabidopsis, highly conserved
 
GRMZM2G100639
Sabelli, PA et al. 2009. Proc Natl Acad Sci, USA 106:4042??4047     Reference: July 31st, 2017
Gene Product: August 2nd, 2017
Variation: January 21st, 2011
Gene Model: June 1st, 2017
3 months agomcm1 minichromosome maintenance1:
 
GRMZM2G065205
Sabelli, PA et al. 2009. Proc Natl Acad Sci, USA 106:4042??4047   AT4G02060 (TAIR) Reference: July 31st, 2017
Gene Product: August 2nd, 2017
Gene Model: July 30th, 2017
3 months agomcm6 minichromosome maintenance6: Essential for both vegetative as well as reproductive growth and development in plants.
 
GRMZM2G021069
Dresselhaus, T et al. 2006. Plant Physiol 140:512-527   AT5G44635 (TAIR) Reference: July 31st, 2017
Gene Product: August 2nd, 2017
Gene Model: July 31st, 2017
3 months agomcm7 minichromosome maintenance7:
 
GRMZM2G139894
Sabelli, PA et al. 2009. Proc Natl Acad Sci, USA 106:4042??4047     Reference: July 31st, 2017
Gene Product: August 2nd, 2017
Gene Model: July 31st, 2017
3 months agomcm4 minichromosome maintenance4:
 
GRMZM2G066101
Sabelli, PA et al. 2009. Proc Natl Acad Sci, USA 106:4042??4047     Reference: July 31st, 2017
Gene Product: August 2nd, 2017
Gene Model: July 31st, 2017
3 months agomcm5 minichromosome maintenance5:
5.08
GRMZM2G075978
Sabelli, PA et al. 2009. Proc Natl Acad Sci, USA 106:4042??4047     Reference: July 31st, 2017
Gene Product: August 2nd, 2017
Gene Model: July 31st, 2017
3 months agobnlg149  :
1.00
GRMZM5G833153
    Variation: September 1st, 2003
Gene Model: August 1st, 2017
3 months agokrp17 kinesin heavy chain17:
1.01
GRMZM2G092232
    Variation: September 1st, 2003
Gene Model: August 1st, 2017
3 months agoaic1 auxin import carrier1: cDNA encoding a protein with a deduced amino acid showing 73% identity to AtAUX1.
1.05
GRMZM2G129413
Huang, C-F et al. 2017. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.1709171114   AT2G21050 (TAIR) Reference: August 1st, 2017
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: November 21st, 2015
3 months agopin4 PIN-formed protein4: auxin efflux carriter similar to Arabidopsis PIN1 (Forestan et al 2012), but from PIN clade not found in all flowering plants save for the Brassicacease (O'Connor 2014 et al
4.08
GRMZM2G171702
Huang, C-F et al. 2017. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.1709171114     Reference: August 1st, 2017
Gene Product: April 21st, 2014
Gene Model: January 24th, 2013
3 months agoaic2 auxin import carrier2:
 
GRMZM2G045057
Huang, C-F et al. 2017. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.1709171114   AT2G21050 (TAIR) Reference: August 1st, 2017
Gene Product: September 1st, 2003
Variation: August 1st, 2017
Gene Model: August 1st, 2017
3 months agopin2 PIN-formed protein2: see pin1
5.06
GRMZM2G074267
Huang, C-F et al. 2017. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.1709171114     Reference: August 1st, 2017
Gene Product: April 21st, 2014
Variation: June 11th, 2007
Gene Model: June 7th, 2012
3 months agopin1 PIN-formed protein1: gene product cross-reacts with anti-AtPIN1 antibody and in tassel and ear, the PIN proteins are localized to a group of cells in subepidermal meristematic layers.
9.01
GRMZM2G398650
Huang, C-F et al. 2017. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.1709171114     Reference: August 1st, 2017
Gene Product: April 21st, 2014
Variation: January 20th, 2015
Gene Model: June 7th, 2012
3 months agozmm2 Zea mays MADS2: cDNA similar to zag1 (Schmidt et al., 1993), and to AGAMOUS of Arabidopsis; zmm2 and zag1, like zmm1 and zag2, are possibly duplications phylogenetically; expression preferentially in the tassel
8.03
   Kelliher, T et al. 2014. Frontiers Plant Sci 5:347     Reference: August 8th, 2014
Gene Product: September 1st, 2003
Variation: July 31st, 2017
3 months agofen1 flap endonuclease1: required for DNA repair
6.07
GRMZM2G121262
Dresselhaus, T et al. 2006. Plant Physiol 140:512-527   AT5G26680 (TAIR) Reference: July 31st, 2017
Gene Product: July 31st, 2017
Variation: July 31st, 2017
Gene Model: July 31st, 2017
3 months agowc1 white cap1: dominant Wc1 kernels have pale yellow endosperm if Y1 (pearly white with y1); whiteness is emphasized in soft-starch crowns
9.07
   Tan, BC, et al. 2017. Genetics. 206:135-150     Reference: July 27th, 2017
Gene Product: September 20th, 2012
Variation: October 5th, 2012
3 months agohac101b histone acetyltransferase101b:
1.05
GRMZM2G335438
    Gene Product: November 6th, 2003
Variation: September 1st, 2003
Gene Model: July 27th, 2017
3 months agodrl2 drooping leaf2: mutant enhances the phenotype of ifa1 mutants (a.k.a. drl1)
9.06
GRMZM2G102218
Strable, J, et al. 2017. Plant Cell. 0:doi: 10.1105/tpc.16.00477   AT1G69180 (TAIR)
LOC_Os03g11600 (MSU/TIGR)
Reference: July 27th, 2017
Gene Product: October 16th, 2015
Variation: July 12th, 2017
Gene Model: October 16th, 2015
3 months agoifa1 indeterminate floral apex1: mutants have perturbed floral and inflorescence meristems as well as droopy leaves with increased angle
 
GRMZM2G088309
Strable, J, et al. 2017. Plant Cell. 0:doi: 10.1105/tpc.16.00477   AT1G69180 (TAIR)
LOC_Os03g11600 (MSU/TIGR)
Reference: July 27th, 2017
Gene Product: October 16th, 2015
Variation: July 13th, 2017
Gene Model: October 16th, 2015
3 months agohyd6 hydroxylase6: beta-carotene hydroxylase
 
GRMZM5G826824
Owens, BF, et al. 2014. Genetics. 198:1699-1716     Reference: January 1st, 2015
Gene Product: December 13th, 2011
Variation: September 3rd, 2011
Gene Model: July 27th, 2017
3 months agoimd4 isopropylmalate dehydrogenase4:
 
GRMZM2G120857
    Gene Product: September 1st, 2003
Gene Model: July 27th, 2017
3 months agomyb3  : single copy; encodes WD-repeat protein
5.04
GRMZM2G099334
Carey, C; Strahle, JT; Selinger, D; Chandler, V. 2004. Plant Cell. 16:450-464     Reference: June 7th, 2004
Gene Product: July 25th, 2017
Variation: May 28th, 2015
Gene Model: May 28th, 2015
3 months agomyb89 MYB-transcription factor 89: homology to R2R3 Myb genes
 
GRMZM2G040924
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 25th, 2017
Gene Model: June 24th, 2016
3 months agomybr36 MYB-related-transcription factor 36: single copy genomic; similar to R2R3 Myb genes
2.02
GRMZM2G014534
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 25th, 2017
Gene Model: June 23rd, 2016
3 months agomyb14 MYB-transcription factor 14: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Xiao, QL et al. 2017. FEBS J pp.doi: 10.1111/febs.14179     Reference: July 21st, 2017
Gene Product: July 25th, 2017
3 months agomyb45 MYB-transcription factor 45: single copy genomic clone asg8 contains myb motifNCBI: myb domain protein 4r1Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.01
GRMZM2G051793
Grant, D et al. 1993. MNL 67:55-61     Reference: September 1st, 2003
Gene Product: July 25th, 2017
Gene Model: April 7th, 2017
3 months agote1 terminal ear1: stalked ear appendages at tip; varying to infolded ears
3.05
   Mendes-Moreira, P et al. 2015. PLoS One 10:e0124543     Reference: April 30th, 2015
Gene Product: September 1st, 2003
Variation: July 24th, 2017
3 months agowrky122 WRKY-transcription factor 122: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Hong, CY et al. 2016. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2016.12.064     Reference: December 14th, 2016
Gene Product: July 24th, 2017
Variation: December 14th, 2016
3 months agowrky29 WRKY-transcription factor 29: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Borrego, EJ; Kolomiets, MV. 2016. Plants 5:doi: 10.3390/plants5040041     Reference: December 6th, 2016
Gene Product: July 24th, 2017
3 months agowrky98 WRKY-transcription factor 98: NCBI: probable WRKY transcription factor 12 (similarity to Arabidpsis gene)Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.06
GRMZM2G377217
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 24th, 2017
Variation: March 15th, 2017
Gene Model: March 15th, 2017
3 months agowrky16 WRKY-transcription factor 16: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.08
GRMZM2G063216
Borrego, EJ; Kolomiets, MV. 2016. Plants 5:doi: 10.3390/plants5040041     Reference: December 6th, 2016
Gene Product: July 24th, 2017
Gene Model: December 6th, 2016
3 months agonl3 narrow leaf3: mutant leaves are ~12% narrower
 
   Brewbaker, JL. 2010. MNL 84:in press     Reference: July 24th, 2017
Variation: January 21st, 2011
3 months agolw5 lemon white5: Duplicate factor for lemon endosperm/white seedling with lw6 (Stinard, MNL 86).
 
   Stinard, PS. 2013. MNL 86:29-31     Reference: March 10th, 2014
Variation: July 24th, 2017
3 months agolw6 lemon white6: Duplicate factor for lemon endosperm/white seedling with lw5 (Stinard, MNL 86).
 
   Stinard, PS. 2013. MNL 86:29-31     Reference: March 10th, 2014
Variation: July 24th, 2017
4 months agoga20ox1 gibberellin 20-oxidase1:
1.12
AC203966.5_FG005
Nelissen, H et al. 2017. Plant Biotechnol J pp.doi: 10.1111/pbi.12801     Reference: July 22nd, 2017
Gene Product: October 28th, 2014
Gene Model: October 27th, 2014
4 months agobnlg2238  :
1.04
GRMZM2G016480
    Variation: September 1st, 2003
Gene Model: July 20th, 2017
4 months agobnlg2295  :
1.04
GRMZM2G143703
    Variation: September 29th, 2010
Gene Model: July 20th, 2017
4 months agoko1 kaurene oxidase1:
 
GRMZM2G059308
Mao, HJ et al. 2017. Biotechnol Lett pp.doi: 10.1007/s10529-017-2401-7     Reference: July 20th, 2017
Gene Product: October 27th, 2014
Gene Model: October 27th, 2014
4 months agoko2 kaurene oxidase2:
 
GRMZM2G161472
Mao, HJ et al. 2017. Biotechnol Lett pp.doi: 10.1007/s10529-017-2401-7     Reference: July 20th, 2017
Gene Product: October 27th, 2014
Gene Model: October 27th, 2014
4 months agolox3 lipoxygenase3:
3.06
   Ogunola, OF et al. 2017. PLoS One 12:e0181265     Reference: July 18th, 2017
Gene Product: June 11th, 2014
Variation: November 14th, 2014
4 months agolox10 lipoxygenase10: green leaf volatiles, circadian, herbivore defense; sequence predicts plastidic location; images show location in non-chlorophyll containing organelles
4.09
GRMZM2G018424
Ogunola, OF et al. 2017. PLoS One 12:e0181265     Reference: July 18th, 2017
Gene Product: June 11th, 2014
Variation: June 6th, 2014
Gene Model: October 23rd, 2013
4 months agolox6 lipoxygenase6:
2.02
GRMZM2G040095
Ogunola, OF et al. 2017. PLoS One 12:e0181265     Reference: July 18th, 2017
Gene Product: June 11th, 2014
Variation: June 11th, 2014
Gene Model: June 10th, 2014
4 months agolox1 lipoxygenase1: Full length cDNA is expressed in E. coli (Kim et al. 2003)
3.06
   Ogunola, OF et al. 2017. PLoS One 12:e0181265     Reference: July 18th, 2017
Gene Product: November 13th, 2014
Variation: July 24th, 2008
4 months agolox2 lipoxygenase2:
3.06
GRMZM2G156861
Ogunola, OF et al. 2017. PLoS One 12:e0181265     Reference: July 18th, 2017
Gene Product: June 11th, 2014
Variation: July 18th, 2017
Gene Model: June 10th, 2014
4 months agolox4 lipoxygenase4:
1.09
GRMZM2G109056
Ogunola, OF et al. 2017. PLoS One 12:e0181265     Reference: July 18th, 2017
Gene Product: June 11th, 2014
Variation: June 11th, 2014
Gene Model: June 10th, 2014
4 months agolox5 lipoxygenase5:
5.02
GRMZM2G102760
Ogunola, OF et al. 2017. PLoS One 12:e0181265     Reference: July 18th, 2017
Gene Product: June 11th, 2014
Variation: June 11th, 2014
Gene Model: June 10th, 2014
4 months agolox7 lipoxygenase7:
10.04
GRMZM2G070092
Ogunola, OF et al. 2017. PLoS One 12:e0181265     Reference: July 18th, 2017
Gene Product: June 11th, 2014
Variation: April 23rd, 2009
Gene Model: June 10th, 2014
4 months agolox9 lipoxygenase9:
1.02
GRMZM2G017616
Ogunola, OF et al. 2017. PLoS One 12:e0181265     Reference: July 18th, 2017
Gene Product: June 11th, 2014
Variation: June 12th, 2014
Gene Model: October 23rd, 2013
4 months agolox11 lipoxygenase11:
5.04
GRMZM2G009479
Ogunola, OF et al. 2017. PLoS One 12:e0181265     Reference: July 18th, 2017
Gene Product: June 11th, 2014
Variation: June 10th, 2014
Gene Model: June 10th, 2014
4 months agolox12 lipoxygenase12: single copy, required for resistance to Fusarium stalk and ear rot
3.04
GRMZM2G106748
Ogunola, OF et al. 2017. PLoS One 12:e0181265     Reference: July 18th, 2017
Gene Product: November 13th, 2014
Variation: August 15th, 2014
Gene Model: June 10th, 2014
4 months agolox13 lipoxygenase13:
 
GRMZM5G822593
Ogunola, OF et al. 2017. PLoS One 12:e0181265     Reference: July 18th, 2017
Gene Product: June 11th, 2014
Gene Model: July 18th, 2017
4 months agopspb2 photosystem II oxygen evolving polypeptide2: sequence highly similar to OEC23 oxygen evolving complex protein of photosystem II; located peripheral to lumenal side of thylakoid (Huang et al 2013)
 
GRMZM2G047954
Huang, M et al. 2013. J Proteome Res 12:491-504     Reference: August 5th, 2014
Gene Product: September 1st, 2003
Gene Model: July 15th, 2017
4 months agopspb1 photosystem II oxygen evolving polypeptide1: sequence similar to OEC23 photosystem II polypeptide; located by Huang et al 2013 to thylakoid peripheral on lumen side
 
GRMZM2G016677
Huang, M et al. 2013. J Proteome Res 12:491-504     Reference: August 5th, 2014
Gene Product: September 1st, 2003
Gene Model: July 15th, 2017
4 months agobnlg1564  :
1.07
GRMZM5G821828
    Variation: September 1st, 2003
Gene Model: July 14th, 2017
4 months agoumc1627  : cDNA sequences; SSR umc1627; see also loci probed by umc171 and npi472
8.03
GRMZM2G156857
Sheen, J et al. 1987. Plant Mol Biol 9:217-226     Reference: September 1st, 2003
Variation: July 13th, 2017
Gene Model: July 14th, 2015
4 months agobnlg1484  :
1.03
GRMZM2G019567
    Variation: September 1st, 2003
Gene Model: July 12th, 2017
4 months agobnlg1556  :
1.07
GRMZM2G028726
    Variation: September 1st, 2003
Gene Model: July 12th, 2017
4 months agobnlg1014  :
1.01
GRMZM2G020548
    Variation: September 1st, 2003
Gene Model: July 11th, 2017
4 months agobnlg1025  :
1.07
GRMZM2G078088
    Variation: September 1st, 2003
Gene Model: July 11th, 2017
4 months agobnlg1331  :
1.09
GRMZM2G466385
    Variation: September 1st, 2003
Gene Model: July 11th, 2017
4 months agoelfg1 elongation factor gamma1: endosperm cDNA 5C04C04 (uaz161), similar to Trypanosoma translation factor
6.04
   Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: September 1st, 2003
Variation: July 9th, 2017
4 months agoelfa11 elongation factor alpha11:
 
AC233866.1_FG006
    Variation: July 9th, 2017
Gene Model: July 8th, 2017
4 months agoms7 male sterile7: like ms2; tapetal cell dysfunction
7.02
GRMZM5G890224
Zhang, DF et al. 2017. Plant Biotechnol J pp.doi: 10.1111/pbi.12786   AT5G22260 (TAIR)
LOC_Os09g27620 (MSU/TIGR)
Os09g0449000 (Gramene)
Reference: July 6th, 2017
Gene Product: July 8th, 2017
Variation: July 6th, 2017
Gene Model: July 6th, 2017
4 months agoiaa28 Aux/IAA-transcription factor 28: gene product physically interacts with LA1 (Dong et al 2013)Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Dong, Z, et al. 2013. Plant Physiol. 163:1306-1322     Reference: November 22nd, 2013
Variation: July 8th, 2017
4 months agodof47 C2C2-Dof-transcription factor 1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Chen, Y; Cao, J. 2014. Plant Mol Biol Rep pp.doi: 10.1007/s11105-014-0835-9     Reference: November 26th, 2014
Variation: July 8th, 2017
4 months agoelfa1 elongation factor alpha1: (was csu116) multiple copies; leaf cDNA csu116, partial sequence identical to a tomato elongation factor
8.03
GRMZM2G151193
Berberich, T et al. 1995. Plant Mol Biol 29:611-615     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: July 8th, 2017
Gene Model: July 8th, 2017
4 months agoeif2 elongation initiation factor2: etiolated leaf cDNA 6C02E11(uaz224) similar to eIF-2 gamma chain
7.04
GRMZM2G107654
Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: September 1st, 2003
Variation: July 8th, 2017
Gene Model: January 13th, 2015
4 months agoccamk1 calcium/calmodulin dependent protein kinase1: involved in ABA signaling (Ma et al 2012)
 
GRMZM2G062772
Ma, F; et al. 2012. J Exp Bot. 63:4835-47     Reference: April 23rd, 2013
Gene Product: December 3rd, 2013
Variation: July 7th, 2017
Gene Model: April 23rd, 2013
4 months agoarftf11 ARF-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Petsch, KA et al. 2015. Plant Cell pp.doi: 10.1105/tpc.15.00194     Reference: July 27th, 2015
Variation: July 7th, 2017
4 months agoarftf23 ARF-transcription factor 23: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Petsch, KA et al. 2015. Plant Cell pp.doi: 10.1105/tpc.15.00194     Reference: July 27th, 2015
Variation: July 7th, 2017
4 months agoarftf26 ARF-transcription factor 26: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Petsch, KA et al. 2015. Plant Cell pp.doi: 10.1105/tpc.15.00194     Reference: July 27th, 2015
Variation: July 7th, 2017
4 months agofea4 fasciated ear4: Mutants are semidwarfed with fasciated ears and tassels as well as greatly enlarged vegetative and inflorescence meristems.
 
   Zhou, LZ et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.01.012     Reference: February 13th, 2017
Gene Product: January 27th, 2015
Variation: July 7th, 2017
4 months agoimp1 importin1: leaf cDNA csu244 similar to importin
8.03
   Baysdorfer, C. 1994. cDNA sequence submission to dbEST     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: July 7th, 2017
4 months agombd119 methyl binding domain119:
1.06
GRMZM2G301098
Springer, N; Kaeppler, SM. 2005. Plant Physiol 138:92-104     Reference: February 3rd, 2010
Gene Product: December 24th, 2015
Variation: February 6th, 2010
Gene Model: July 7th, 2017
4 months agocax3 calcium exchanger3: Expression affected by ABP4, auxin, and Ca++. Homolog of Arabidopsis CAX1 involved in auxin transduction pathway.
3.09
GRMZM2G011592
Jurisic-Knezev, D; Bergougnoux, V; Milde, D; Fellner, M. 2014. Botany. 92:332-339     Reference: June 5th, 2014
Variation: July 7th, 2017
Gene Model: June 6th, 2014
4 months agoao2 aldehyde oxidase2:
5.01
GRMZM5G899851
Owens, BF, et al. 2014. Genetics. 198:1699-1716     Reference: January 1st, 2015
Gene Product: October 4th, 2014
Gene Model: July 7th, 2017
4 months agoabh4 abscisic acid 8'-hydroxylase4:
7.02
GRMZM2G065928
Vallabhaneni, R; Wurtzel, E. 2010. Arch Biochem Biophys. 504:112-7     Reference: February 15th, 2013
Gene Product: February 15th, 2013
Variation: March 31st, 2005
Gene Model: July 7th, 2017
4 months agoga2ox1 gibberellin 2-oxidase1: Bolduc and Hake (Plant Cell 21:1647-58, 2009) identify this ga2ox as ga2ox1 by phylogeny. See Supplemental Figure 6. Comparison of syntenic regions containing ga2ox1 in different grasses. They also show that it is a direct target of KN1.
 
GRMZM2G078798
Hu, SL et al. 2017. Frontiers Plant Sci 8:1039     Reference: July 6th, 2017
Gene Product: October 27th, 2014
Variation: November 20th, 2012
Gene Model: November 20th, 2012
4 months agobnl9.11b(lts)  :
1.04
GRMZM2G067371
    Gene Product: September 1st, 2003
Gene Model: July 6th, 2017
4 months agobhlh43 bHLH-transcription factor 43: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.08
GRMZM2G165042
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: July 6th, 2017
4 months agopif3 phytochrome interacting factor3: ortholog of Arabidopsis PIF3; nuclear localized protein; transgenic expression in rice suggest role in stress response (Gao Y et al 2015)
 
GRMZM2G387528
Hu, SL et al. 2017. Frontiers Plant Sci 8:1039   AT1G09530 (TAIR)
LOC_Os05g04740 (MSU/TIGR)
Reference: July 6th, 2017
Gene Product: September 14th, 2016
Gene Model: May 26th, 2015
4 months agoga20ox5 gibberellin 20-oxidase5:
 
GRMZM2G060940
Hu, SL et al. 2017. Frontiers Plant Sci 8:1039     Reference: July 6th, 2017
Gene Product: October 28th, 2014
Variation: July 6th, 2017
Gene Model: October 27th, 2014
4 months agokao2 kaurenoic acid oxidase2:
 
GRMZM2G089803
Hu, SL et al. 2017. Frontiers Plant Sci 8:1039     Reference: July 6th, 2017
Gene Product: August 15th, 2012
Gene Model: October 29th, 2014
4 months agobrc1 brassinosteroid catabolism1: member of BR catabolic gene family
 
GRMZM2G107322
Hu, SL et al. 2017. Frontiers Plant Sci 8:1039   AT2G26710 (TAIR)
LOC_Os02g11020 (MSU/TIGR)
Reference: July 6th, 2017
Gene Product: July 6th, 2017
Gene Model: July 6th, 2017
4 months agobrc2 brassinosteroid catabolism2: member of BR catabolic gene family
 
GRMZM5G852663
Hu, SL et al. 2017. Frontiers Plant Sci 8:1039   AT2G26710 (TAIR)
LOC_Os02g11020 (MSU/TIGR)
Reference: July 6th, 2017
Gene Product: July 6th, 2017
Gene Model: July 6th, 2017
4 months agouaz248a(his3)  :
1.04
GRMZM2G176358
Helentjaris, T. 1994. Nucleotide sequence submission to dbEST/GenBank     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: July 5th, 2017
Gene Model: July 5th, 2017
4 months agouaz248b(his3)  :
5.05
GRMZM2G176358
Shen, B; Carneiro, N; Torres-Jerez, I; Stevenson, B; McCreery, T; Helentjaris, T; Baysdorfer, C; Alm. 1994. Plant Mol Biol 26:1085-1101     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Gene Model: July 5th, 2017
4 months agosdg110b  :
2.06
   Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
4 months agocrr8 cytokinin response regulator8:
1.02
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 30th, 2017
Variation: April 25th, 2008
4 months agocrr2 cytokinin response regulator2: single copy, cDNA and genomic sequences; SSRs umc1569, umc1344; induced by cytokinin, and inorganic nitrogen
10.07
   Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: June 30th, 2017
Variation: October 1st, 2015
4 months agocrr1 cytokinin response regulator1: single copy,cDNA and genomic sequences; induced in leaf by cytokinin, and inorganic nitrogen; SSR umc1622
2.01 - 2.01
GRMZM2G040736
Deji, A et al. 2002. Biosci Biotechnol Biochem 66: 1853-1858     Reference: July 14th, 2007
Gene Product: June 30th, 2017
Gene Model: October 23rd, 2013
4 months agoarr1 ARR-B-transcription factor 1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 30th, 2017
4 months agoarr2 ARR-B-transcription factor 2: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 30th, 2017
4 months agoarr4 ARR-B-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 30th, 2017
4 months agoarr5 ARR-B-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 30th, 2017
4 months agoarr7 ARR-B-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 30th, 2017
4 months agosdg128 set domain gene128: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Chen, LQ et al. 2017. Plant Physiol 174:1795-1806   LOC_Os09g04890 (MSU/TIGR) Reference: June 29th, 2017
Gene Product: June 30th, 2017
Variation: June 29th, 2017
4 months agomez1 enhancer of zeste1:
6.01
   Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: June 30th, 2017
Variation: July 3rd, 2015
4 months agomez2 enhancer of zeste2:
9.04
GRMZM5G875502
Springer, N et al. 2002. Plant Physiol 128:1332-1345     Reference: January 5th, 2011
Gene Product: June 30th, 2017
Variation: September 1st, 2003
Gene Model: July 28th, 2016
4 months agomez3 enhancer of zeste3:
1.03
GRMZM2G043484
Springer, N et al. 2002. Plant Physiol 128:1332-1345     Reference: January 5th, 2011
Gene Product: June 30th, 2017
Variation: September 1st, 2014
Gene Model: September 2nd, 2014
4 months agosdg101 set domain gene101:
7.02
AC233961.1_FG001
Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: June 29th, 2017
Gene Model: June 29th, 2017
4 months agosdg102 set domain gene102:
2.04
GRMZM2G147619
Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: September 1st, 2003
Gene Model: June 29th, 2017
4 months agosdg104 SET domain-containing protein SET104:
2.03
   Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: September 1st, 2003
4 months agosdg105 set domain gene105:
8.05 - 8.05
   Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: June 29th, 2017
4 months agosdg106 set domain gene106:
2.07
GRMZM2G409213
Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: September 1st, 2003
Gene Model: June 29th, 2017
4 months agosdg107 set domain gene107:
2.03
GRMZM2G357972
Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: September 1st, 2003
Gene Model: June 29th, 2017
4 months agosdg108 set domain gene108:
4.04
GRMZM2G149153
Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: September 1st, 2003
Gene Model: June 29th, 2017
4 months agosdg110a set domain gene110a:
7.02
GRMZM2G130910
Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: September 1st, 2003
Gene Model: June 29th, 2017
4 months agosdg111 set domain gene111:
6.06
GRMZM2G117458
Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: September 1st, 2003
Gene Model: June 29th, 2017
4 months agosdg113 set domain gene113:
3.06
   Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: September 1st, 2003
4 months agosdg115 set domain gene115:
3.08
GRMZM2G033350
Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: September 1st, 2003
Gene Model: June 29th, 2017
4 months agosdg116 set domain gene116:
2.07
GRMZM2G105869
Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: September 1st, 2003
Gene Model: June 29th, 2017
4 months agosdg118 set domain gene118:
8.06
GRMZM2G054380
Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: September 1st, 2003
Gene Model: June 29th, 2017
4 months agosdg119 set domain gene119:
2.06
   Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: September 1st, 2003
4 months agosdg123 SET domain protein123: histone methylation; one of 3 with disrupted (S-ET) domains among 22 SET domain proteins
1.08
GRMZM2G080462
Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: February 2nd, 2015
Gene Model: February 2nd, 2015
4 months agosdg129 set domain gene129:
5.03
GRMZM2G305124
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 30th, 2017
Variation: September 1st, 2003
Gene Model: June 29th, 2017
4 months agosdg122 set domain gene122:
1.02
GRMZM2G091916
Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: June 29th, 2017
Gene Model: June 29th, 2017
4 months agocrr7 cytokinin response regulator7:
 
GRMZM2G096171
Asakura, Y, et al. 2003. Plant Mol Biol. 52:331-341     Reference: August 9th, 2004
Gene Product: June 30th, 2017
Gene Model: December 19th, 2015
4 months agoatx3 arabidopsis trithorax homolog3:
 
GRMZM2G372928
Chen, LQ et al. 2017. Plant Physiol 174:1795-1806   AT4G27910 (TAIR)
LOC_Os01g11952 (MSU/TIGR)
Reference: June 29th, 2017
Gene Product: June 30th, 2017
Gene Model: June 29th, 2017
4 months agoatx4 arabidopsis trithorax homolog4:
 
GRMZM2G085266
Chen, LQ et al. 2017. Plant Physiol 174:1795-1806   AT4G27910 (TAIR)
LOC_Os01g11952 (MSU/TIGR)
Reference: June 29th, 2017
Gene Product: June 30th, 2017
Gene Model: June 29th, 2017
4 months agoatx5 arabidopsis trithorax homolog5:
 
GRMZM2G179814
Chen, LQ et al. 2017. Plant Physiol 174:1795-1806   AT4G27910 (TAIR)
LOC_Os01g46700 (MSU/TIGR)
Reference: June 29th, 2017
Gene Product: June 30th, 2017
Variation: June 29th, 2017
Gene Model: June 29th, 2017
4 months agosdg117 set domain gene117:
 
GRMZM2G172427
Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Gene Model: June 29th, 2017
4 months agosdg127 set domain gene127:
 
GRMZM2G473138
Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Gene Model: June 29th, 2017
4 months agosdg130 set domain gene130:
 
GRMZM2G457881
Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Variation: June 29th, 2017
Gene Model: June 29th, 2017
4 months agoarr8 ARR-B-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.08
GRMZM2G479110
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 30th, 2017
Variation: June 30th, 2017
Gene Model: June 30th, 2017
4 months agocrr5 cytokinin response regulator5:
3.05
   Asakura, Y, et al. 2003. Plant Mol Biol. 52:331-341     Reference: August 9th, 2004
Gene Product: June 30th, 2017
Variation: March 31st, 2005
4 months agosdg103 SET domain group 103:
 
GRMZM2G074094
Springer, N; Napoli, CM; Selinger, D; Pandey, R; Cone, KC; Chandler, V; Kaeppler, HF; Kaeppler, S. 2003. Plant Physiol. 132:907-925     Reference: October 16th, 2003
Gene Product: June 30th, 2017
Gene Model: June 29th, 2017
4 months agocrr4 cytokinin response regulator4:
8.06
GRMZM2G319187
Asakura, Y, et al. 2003. Plant Mol Biol. 52:331-341     Reference: August 9th, 2004
Gene Product: June 30th, 2017
Gene Model: December 19th, 2015
4 months agoasg75  : NCBI: similar to Arabidopsis lipase class 3 family protein
1.04
GRMZM5G882821
Grant, D et al. 1993. MNL 67:55-61     Reference: September 1st, 2003
Variation: September 19th, 2009
Gene Model: June 30th, 2017
5 months agoali1 aladin1:
 
       Variation: June 23rd, 2017
5 months agoumc2236  : similar to Arabidopsis glutamate decarboxylase 1 based on LOC100501579
1.06
GRMZM2G017110
    Variation: June 16th, 2017
Gene Model: June 16th, 2017
5 months agoumc2230  : NCBI:probable xyloglucan endotransglucosylase/hydrolase protein 27
1.05
GRMZM2G070271
    Variation: January 10th, 2017
Gene Model: June 15th, 2017
5 months agoumc2231  : NCBI: vacuolar amino acid transporter 1-like
1.05
GRMZM2G017170
    Variation: January 10th, 2017
Gene Model: June 15th, 2017
5 months agoumc1948  :
1.01
GRMZM2G172758
    Variation: May 10th, 2016
Gene Model: June 14th, 2017
5 months agosirk1 sucrose-induced receptor kinase1: expression is altered in response to drought stress
 
GRMZM2G161664
Aquino, B et al. 2017. Frontiers Plant Sci pp.doi: 10.3389/fpls.2017.00852   AT5G10020 (TAIR) Reference: June 14th, 2017
Gene Product: July 1st, 2015
Gene Model: June 13th, 2017
5 months agoumc1603  :
1.05
GRMZM2G127739
    Variation: November 17th, 2016
Gene Model: June 13th, 2017
5 months agofha2 FHA-transcription factor 2:
1.06
GRMZM2G424241
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: June 9th, 2017
5 months agoumc1111  : Seed specific protein Bn15D14A
1.11
GRMZM2G163912
    Variation: September 21st, 2016
Gene Model: June 9th, 2017
5 months agoumc1123  :
1.06
GRMZM5G854901
    Variation: September 1st, 2003
Gene Model: June 9th, 2017
5 months agoumc1128  : CDPK-related kinase 3-like
1.07
GRMZM2G031893
    Variation: September 1st, 2003
Gene Model: June 9th, 2017
5 months agoAY110632  :
1.03
GRMZM2G032047
    Variation: July 29th, 2004
Gene Model: June 8th, 2017
5 months agoAY110640  : similar to Arabidopsis RNA pseudouridine synthase 5
1.03
GRMZM2G158261
    Variation: July 29th, 2004
Gene Model: June 8th, 2017
5 months agohagtf3 GNAT-transcription factor 3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: June 7th, 2017
5 months agoAY110052  :
1.03
GRMZM2G141799
    Variation: September 25th, 2007
Gene Model: June 7th, 2017
5 months agoAY110159  : similar to M. trunculata Chloroplast inner envelope protein
1.07 - 1.08
GRMZM5G888696
    Variation: July 29th, 2004
Gene Model: June 7th, 2017
5 months agoAY110296  : similar to M. trunculata Ubiquitin and WLM domain-containing protein
1.06
GRMZM2G115981
    Variation: March 21st, 2006
Gene Model: June 7th, 2017
5 months agoAY110396  :
1.05
GRMZM2G110572
    Variation: July 29th, 2004
Gene Model: June 7th, 2017
5 months agoAI855190  :
1.05
GRMZM2G443525
    Variation: July 29th, 2004
Gene Model: June 6th, 2017
5 months agoAY109916  :
1.12
GRMZM2G422649
    Variation: July 29th, 2004
Gene Model: June 6th, 2017
5 months agocap2 calcium pump2: paralog of cap1; calcium-transporting ATPase
1.03
GRMZM2G428096
Subbaiah, C et al. 2017. Mol Plant-Microbe Interact pp.doi: 10.1094/MPMI-02-17-0026-R     Reference: March 7th, 2017
Gene Product: May 20th, 2015
Variation: June 6th, 2017
Gene Model: June 6th, 2017
5 months agocat1 catalase1: electrophoretic mobility; cytosolic/glyoxysomal; tetrameric; intra/interlocus hybrid bands occur
5.03
   Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60     Reference: June 5th, 2017
Gene Product: September 1st, 2003
Variation: September 1st, 2003
5 months agosod4 superoxide dismutase4: electrophoretic mobility; cytosolic; Cu-Zn dimeric; intralocus hybrid bands occur; two similar sequences X17564 (sod4), X17565(sod4A)
1.04
   Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60     Reference: June 5th, 2017
Gene Product: February 12th, 2007
Variation: April 20th, 2005
5 months agocipk8 calcineurin B-like-interacting protein kinase8:
 
GRMZM2G383240
Tai, F, et al. 2016. Plant Cell, Tissue and Organ Culture (PCTOC). 124:459-469     Reference: June 5th, 2017
Gene Product: June 2nd, 2017
Variation: June 2nd, 2017
Gene Model: June 2nd, 2017
5 months agogsr1 glutathione reductase1: single copy leaf cDNA csu111, similar to pea glutathione reductase
1.01
   Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60     Reference: June 5th, 2017
Gene Product: September 1st, 2003
Variation: January 30th, 2015
5 months agouce4 ubiquitin conjugating enzyme4:
2.01
   Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60     Reference: June 5th, 2017
Gene Product: September 1st, 2003
Variation: July 29th, 2004
5 months agocbl1 calcineurin B-like1:
 
GRMZM2G107575
Tai, F, et al. 2016. Plant Cell, Tissue and Organ Culture (PCTOC). 124:459-469     Reference: June 5th, 2017
Gene Product: October 19th, 2016
Gene Model: October 19th, 2016
5 months agocbl9 calcineurin B-like9:
 
GRMZM2G015324
Tai, F, et al. 2016. Plant Cell, Tissue and Organ Culture (PCTOC). 124:459-469     Reference: June 5th, 2017
Gene Product: October 19th, 2016
Gene Model: October 19th, 2016
5 months agoapx4 ascorbate peroxidase4:
 
GRMZM2G316256
Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60     Reference: June 5th, 2017
Gene Product: September 1st, 2003
Variation: June 5th, 2017
Gene Model: June 5th, 2017
5 months agoucp1 uncoupling protein1:
 
GRMZM5G852877
Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60     Reference: June 5th, 2017
Gene Product: June 5th, 2017
Variation: June 5th, 2017
Gene Model: June 5th, 2017
5 months agoucp2 uncoupling protein2:
 
GRMZM2G165629
Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60     Reference: June 5th, 2017
Gene Product: June 5th, 2017
Gene Model: June 5th, 2017
5 months agoznf3 zinc finger protein3:
 
   Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60     Reference: June 5th, 2017
Gene Product: April 4th, 2017
5 months agoznf4 zinc finger protein4:
 
GRMZM2G048154
Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60     Reference: June 5th, 2017
Gene Product: April 4th, 2017
Gene Model: June 5th, 2017
5 months agoznf5 zinc finger protein5:
 
GRMZM2G001205
Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60     Reference: June 5th, 2017
Gene Product: April 4th, 2017
Gene Model: June 5th, 2017
5 months agoznf6 zinc finger protein6:
 
GRMZM5G804618
Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60     Reference: June 5th, 2017
Gene Product: April 4th, 2017
Gene Model: June 5th, 2017
5 months agocbl4 calcineurin B-like2:
6.06
GRMZM2G001221
Tai, F, et al. 2016. Plant Cell, Tissue and Organ Culture (PCTOC). 124:459-469     Reference: June 5th, 2017
Gene Product: October 19th, 2016
Gene Model: October 19th, 2016
5 months agompk3 MAP kinase3: transcript and protein activity upregulated by ABA and H2O2
1.03
GRMZM2G017792
Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60     Reference: June 5th, 2017
Gene Product: July 9th, 2013
Variation: July 12th, 2013
Gene Model: July 9th, 2013
5 months agoucp3 uncoupling protein homolog3:
 
GRMZM2G000510
Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60     Reference: June 5th, 2017
Gene Product: June 5th, 2017
Variation: June 5th, 2017
Gene Model: June 5th, 2017
5 months agoorc2 origin recognition complex2: member of a complex having a role in recognition and binding to origins of DNA replication; evidence from yeast two-hybrid assays and expression profiles
 
GRMZM2G117238
Witmer, X et al. 2003. Putative subunits of the maize origin of replication recognition complex ZmORC1-ZmORC5. Nucl Acid Res 31:619-628     Reference: September 1st, 2003
Gene Model: June 3rd, 2017
Recommended by Marty Sachs:
March 7th, 2007
5 months agoorc4 origin recognition complex4: member of a complex having a role in recognition and binding to origins of DNA replication; evidence from yeast two-hybrid assays and expression profiles
 
GRMZM5G876520
Witmer, X et al. 2003. Putative subunits of the maize origin of replication recognition complex ZmORC1-ZmORC5. Nucl Acid Res 31:619-628     Reference: September 1st, 2003
Gene Model: June 3rd, 2017
Recommended by Marty Sachs:
March 7th, 2007
5 months agocda1 cytidine deaminase1:
7.02
GRMZM2G082924
Xu, JH; Messing, J. 2006. BMC Genetics. 7:52     Reference: August 26th, 2008
Gene Product: August 26th, 2008
Variation: February 7th, 2009
Gene Model: June 3rd, 2017
5 months agocda2 cytidine deaminase2:
2.06
GRMZM2G008216
Xu, JH; Messing, J. 2006. BMC Genetics. 7:52     Reference: August 26th, 2008
Gene Product: August 26th, 2008
Variation: February 7th, 2009
Gene Model: June 3rd, 2017
5 months agohat1 histone acetyltransferase1: cDNA, genomic and peptide sequence; antibody cross-reactivity
7.02
GRMZM5G851405
Lusser, A et al. 1999. Nucl Acid Res 27:4427-4435     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: January 28th, 2009
Gene Model: June 3rd, 2017
5 months agofcr1 ferric-chelate reductase (NADH)1: member of a multi-gene family
3.06
GRMZM2G133213
Bagnaresi, P et al. 1999. Biochem J 338:499-505     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: July 9th, 2008
Gene Model: June 3rd, 2017
5 months agohmt1 homocysteine S-methyltransferase 1:
 
   Ranocha, P et al. 2001. Plant J 25:575-584     Reference: September 1st, 2003
Gene Product: July 19th, 2004
Variation: June 3rd, 2017
5 months agoork1 outward rectifying potassium channel1:
4.05
GRMZM2G156255
Philippar, K, et al. 2003. J Biol Chem. 278:16973-81     Reference: July 14th, 2006
Gene Product: February 19th, 2008
Variation: February 19th, 2008
Gene Model: June 3rd, 2017
5 months agoorc3 origin recognition complex3: member of a complex having a role in recognition and binding to origins of DNA replication; evidence from yeast two-hybrid assays and expression profiles
 
GRMZM2G381822
Witmer, X et al. 2003. Putative subunits of the maize origin of replication recognition complex ZmORC1-ZmORC5. Nucl Acid Res 31:619-628     Reference: September 1st, 2003
Variation: November 6th, 2010
Gene Model: June 2nd, 2017
Recommended by Marty Sachs:
March 7th, 2007
5 months agotel2 telomere maintenance2:
 
GRMZM2G144166
Garcia, NS et al. 2017. Proc Natl Acad Sci, USA 114:5165-5170     Reference: June 1st, 2017
Gene Product: June 2nd, 2017
Gene Model: June 1st, 2017
5 months agodek38 defective kernel38: mutants are embryonic lethal, has a defective basal endosperm transfer (BETL) layer, and results in a smaller seed with highly underdeveloped endosperm.
 
GRMZM2G048851
Garcia, NS et al. 2017. Proc Natl Acad Sci, USA 114:5165-5170   At2g39910 (TAIR) Reference: June 1st, 2017
Gene Product: June 2nd, 2017
Variation: May 2nd, 2017
Gene Model: May 2nd, 2017
5 months agotti1 tel2-interacting protein1:
 
GRMZM2G056403
Garcia, NS et al. 2017. Proc Natl Acad Sci, USA 114:5165-5170     Reference: June 1st, 2017
Gene Product: June 2nd, 2017
Variation: June 1st, 2017
Gene Model: June 1st, 2017
5 months agoeng1 endo-1,3-1,4-beta-D-glucanase1: coleoptile enzyme, orthologous to rice enzyme; located in cell wall, IAA- stimulated coleoptile growth inhibited by antibody
4.05
GRMZM2G073079
Thomas, B et al. 1998. Plant Physiol 117: 1525     Reference: March 16th, 2006
Variation: May 20th, 2009
Gene Model: June 1st, 2017
Recommended by Ed Coe:
January 8th, 2008
5 months agorab30 responsive to abscisic acid30: cDNA and protein elicited by ABA
1.01
GRMZM2G472236
Burr, B et al. 1991. MNL 65:105-110     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: May 2nd, 2011
Gene Model: June 1st, 2017
5 months agomtl3 metallothionein3: cDNA highly expressed during microsporogenesis, one (or two) copies, high sequence homology with type 2 metallothionein.
4.05
GRMZM2G099340
Charbonnel-Campaa, L et al. 2000. Gene 254:199-208     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: June 1st, 2017
5 months agohvp1 human viral protein homolog1: endosperm cDNA 5C02B04, similar to a virus transcription activator
9.02
GRMZM5G852396
Helentjaris, T. 1994. Nucleotide sequence submission to dbEST/GenBank     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: June 1st, 2017
5 months agosin1 sin homolog1: endosperm cDNA 5C01E06, similar to yeast SIN3
 
GRMZM2G319104
Helentjaris, T. 1994. Nucleotide sequence submission to dbEST/GenBank     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: June 1st, 2017
5 months agosmk2 small kernel2: mutants are recessive embryo-lethal small kernel
4.10
GRMZM2G023528
Yang, Y-Z, et al. 2017. Plant Physiol. 0:doi: 10.1104/pp.16.01295     Reference: June 1st, 2017
Gene Product: April 14th, 2017
Variation: April 14th, 2017
Gene Model: April 14th, 2017
5 months agoric1 ras-related protein RIC1:
 
GRMZM2G106960
Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141     Reference: January 12th, 2011
Variation: January 12th, 2011
Gene Model: June 1st, 2017
5 months agoara3 ras-related protein ARA-3:
 
GRMZM2G061900
Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141     Reference: January 12th, 2011
Variation: January 17th, 2011
Gene Model: June 1st, 2017
5 months agorgp2 ras-related protein RGP2:
 
GRMZM2G093186
Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141     Reference: January 12th, 2011
Variation: January 17th, 2011
Gene Model: June 1st, 2017
5 months agosqsh1 squalene synthase homolog1: Designation as sqsh1 based on high homology to sqs1 sequence; existence of several cDNAs indicates a functional gene (EHC Jan 2011)
 
GRMZM2G029396
    Variation: January 27th, 2011
Gene Model: June 1st, 2017
5 months agocnh1 carbon-nitrogen hydrolase homolog1:
9.07
GRMZM2G169365
Guo, M; Rupe, M; Danilevskaya, O; Yang, X; Hut, ZH. 2003. Plant J. 36:30-44     Reference: November 12th, 2010
Variation: March 24th, 2011
Gene Model: June 1st, 2017
5 months agopsei5 cystatin5:
6.05
GRMZM2G024264
Massonneau, A; Condamine, P; Wisniewski, J; Zivy, M; Rogowsky, P. 2005. Biochim Biophys Acta. 1729:186-199     Reference: February 20th, 2009
Gene Product: April 21st, 2008
Variation: April 21st, 2008
Gene Model: June 1st, 2017
5 months agopsei10 cystatin10:
8.06
GRMZM2G030717
Massonneau, A; Condamine, P; Wisniewski, J; Zivy, M; Rogowsky, P. 2005. Biochim Biophys Acta. 1729:186-199     Reference: February 20th, 2009
Gene Product: April 21st, 2008
Variation: April 21st, 2008
Gene Model: June 1st, 2017
5 months agorpl44 ribosomal protein L44: vegetative meristem cDNA 7C02A07
7.03
GRMZM2G009412
Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: September 1st, 2003
Variation: January 24th, 2009
Gene Model: June 1st, 2017
5 months agobk2 brittle stalk2: brittle plant parts after 4-leaf stage
9.04 - 9.05
GRMZM2G109326
Xie, GN et al. 2017. Plant Biotechnol J pp.doi: 10.1111/pbi.12763     Reference: May 31st, 2017
Gene Product: March 6th, 2012
Variation: March 6th, 2012
Gene Model: March 5th, 2012
5 months agobt2 brittle endosperm2: like bt1; endosperm ADPG pyrophosphorylase subunit; with sh2 complements E. coli glgC
4.05
   Xie, GN et al. 2017. Plant Biotechnol J pp.doi: 10.1111/pbi.12763     Reference: May 31st, 2017
Gene Product: November 4th, 2014
Variation: November 12th, 2013
5 months agosh2 shrunken2: inflated, transparent, sweet kernels collapse on drying, becoming angular and brittle; endosperm ADPG pyrophosphorylase subunit (compare bt2); application: "supersweet" sweet corn - kernels sugar-sweet for long period
3.09
   Xie, GN et al. 2017. Plant Biotechnol J pp.doi: 10.1111/pbi.12763     Reference: May 31st, 2017
Gene Product: November 4th, 2014
Variation: October 10th, 2014
5 months agowx1 waxy1: amylopectin (stained red by iodine) replaces amylose (blue staining) in endosperm and pollen; extensive allelic series; application: highly branched starch has gelling properties, used for food gels, adhesives, and other industrial purposes; SSRs phi022, 027, 061NCBI: granule-bound starch synthase 1, chloroplastic/amyloplastic
9.03
   Xie, GN et al. 2017. Plant Biotechnol J pp.doi: 10.1111/pbi.12763     Reference: May 31st, 2017
Gene Product: June 4th, 2008
Variation: March 4th, 2017
5 months agosweet4c sugars will eventually be exported transporter4c: Mutants are defective in seed filling
5.04
GRMZM2G137954
Xie, GN et al. 2017. Plant Biotechnol J pp.doi: 10.1111/pbi.12763   LOC_Os02g19820 (MSU/TIGR) Reference: May 31st, 2017
Gene Product: November 4th, 2015
Variation: November 3rd, 2015
Gene Model: November 3rd, 2015
5 months agoubr1 ubiquitin receptor1: Orthologous to Arabidopsis DA1
 
GRMZM2G017845
Xie, GN et al. 2017. Plant Biotechnol J pp.doi: 10.1111/pbi.12763     Reference: May 31st, 2017
Gene Product: October 11th, 2012
Variation: October 11th, 2012
Gene Model: October 10th, 2012
5 months agolimtf4 LIM-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.05
GRMZM2G099328
Xie, GN et al. 2017. Plant Biotechnol J pp.doi: 10.1111/pbi.12763   AT4G36860 (TAIR) Reference: May 31st, 2017
Gene Product: May 31st, 2017
Variation: May 31st, 2017
Gene Model: May 31st, 2017
5 months agoAY103944  : similar to Arabidopsis poly(A) binding protein 8
2.04
GRMZM2G352129
    Variation: September 25th, 2007
Gene Model: May 30th, 2017
5 months agoAI714808  : similar to Arabidopsis protein phosphatase methylesterase 1
2.04
GRMZM2G005346
    Variation: July 29th, 2004
Gene Model: May 30th, 2017
5 months agoAW036917  :
6.05
GRMZM2G106218
    Variation: July 29th, 2004
Gene Model: May 30th, 2017
5 months agoereb94 AP2-EREBP-transcription factor 94: strongly expressed in the maize endosperm; might act as a key regulator of starch synthesis in maize (Li et al., 2017)
 
   Li, H et al. 2017. J Plant Physiol 216:11-16     Reference: May 29th, 2017
Variation: May 9th, 2017
5 months agomab27 math-btb27:
 
GRMZM2G161569
Juranic, M et al. 2012. Plant Cell 24:4974-4991     Reference: February 14th, 2017
Gene Product: June 6th, 2014
Variation: May 28th, 2017
Gene Model: February 14th, 2017
5 months agorap2 rap2.7 orthologue: negative regulator of flowering time; vgt1 acts as an enhancer (Salvi et al. 2007)
8.06
GRMZM2G700665
Romero-Navarro, JA et al. 2017. Nature Genetics 49:476-480     Reference: May 27th, 2017
Gene Product: February 27th, 2017
Gene Model: November 20th, 2012
5 months agopebp8 phosphatidylethanolamine-binding protein8: florigen activity: complements Arabidopsis FT mutants, promoting flowering at short days. Requires functional id1 gene.(Lazakis et al 2011)
 
GRMZM2G179264
Romero-Navarro, JA et al. 2017. Nature Genetics 49:476-480     Reference: May 27th, 2017
Gene Product: May 6th, 2011
Variation: June 19th, 2015
Gene Model: May 6th, 2011
5 months agod8 dwarf plant8: Dominant D8 plants resemble d1; extreme alleles not responsive to gibberellins.
1.09
GRMZM2G144744
Romero-Navarro, JA et al. 2017. Nature Genetics 49:476-480     Reference: May 27th, 2017
Gene Product: February 12th, 2007
Variation: August 29th, 2007
Gene Model: May 11th, 2011
5 months agozfl1 zea floricaula/leafy1: zfl1 and zfl2 double mutants exhibit a disruption of floral organ identity and patterning, as well as defects in inflorescence architecture and in the vegetative to reproductive phase transition.
10.06
   Romero-Navarro, JA et al. 2017. Nature Genetics 49:476-480     Reference: May 27th, 2017
Variation: February 20th, 2007
5 months agodlf1 delayed flowering1: tall late plant with additional nodes and leaves at flowering; no apparent response to day length
 
   Romero-Navarro, JA et al. 2017. Nature Genetics 49:476-480     Reference: May 27th, 2017
Variation: February 6th, 2011
5 months agocca1 circadian clock associated1: myb transcription factor - clock gene
 
GRMZM2G014902
Romero-Navarro, JA et al. 2017. Nature Genetics 49:476-480     Reference: May 27th, 2017
Gene Product: July 31st, 2016
Variation: March 18th, 2011
Gene Model: July 30th, 2016
5 months agomab20 math-btb20:
 
GRMZM2G009724
Juranic, M et al. 2012. Plant Cell 24:4974-4991     Reference: February 14th, 2017
Gene Product: June 6th, 2014
Variation: May 26th, 2017
Gene Model: February 14th, 2017
5 months agocki4 cyclin-dependent kinase inhibitor4:
 
GRMZM2G358931
Xiao, QL et al. 2017. Sci. Rep. 7:43818     Reference: March 7th, 2017
Gene Product: March 8th, 2017
Variation: May 26th, 2017
Gene Model: March 7th, 2017
6 months agomab1 math-btb1:
 
AC195147.3_FG001
Juranic, M et al. 2012. Plant Cell 24:4974-4991     Reference: February 14th, 2017
Gene Product: June 6th, 2014
Variation: May 24th, 2017
Gene Model: February 13th, 2017
6 months agomab15 math-btb15:
 
GRMZM2G148213
Juranic, M et al. 2012. Plant Cell 24:4974-4991     Reference: February 14th, 2017
Gene Product: June 6th, 2014
Variation: May 24th, 2017
Gene Model: February 13th, 2017
6 months agosca1 short chain alcohol dehydrogenase1: single copy leaf cDNA, csu149, similar to ts2
5.00
GRMZM2G332976
Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851     Reference: May 23rd, 2017
Gene Product: September 1st, 2003
Variation: July 27th, 2013
Gene Model: June 23rd, 2015
6 months agolw1 lemon white1: white seedling, pale yellow endosperm; some alleles have zebra or luteus phenotypes
1.10
GRMZM2G027059
Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851     Reference: May 23rd, 2017
Gene Product: June 20th, 2012
Variation: March 10th, 2016
Gene Model: January 8th, 2014
6 months agovp5 viviparous5: like vp2cDNA, strongest hybridization to this site; other sites are near o2, bnl17.25 and dup103; encodes a 2-step phytoene desaturase; SSR umc1070
1.02 - 1.02
   Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851     Reference: May 23rd, 2017
Gene Product: December 13th, 2011
Variation: March 4th, 2014
6 months agoaox1 alternative oxidase1: primers give PCR product closely similar to alternative oxidase in other species
2.02
AC233960.1_FG002
Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851     Reference: May 23rd, 2017
Gene Product: February 22nd, 2012
Variation: February 22nd, 2012
Gene Model: February 17th, 2012
6 months agocmk1 cytidine methyl kinase1: encodes 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase [a.k.a. 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase]
3.06
GRMZM5G859195
Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851     Reference: May 23rd, 2017
Gene Product: October 9th, 2014
Gene Model: October 4th, 2014
6 months agonced5 nine-cis-epoxycarotenoid dioxygenase5:
 
GRMZM2G417954
Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851     Reference: May 23rd, 2017
Gene Product: September 20th, 2012
Variation: September 1st, 2011
Gene Model: September 20th, 2012
6 months agoaox2 alternative oxidase2: primers give PCR product closely similar to alternative oxidase in other species
 
GRMZM2G125669
Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851     Reference: May 23rd, 2017
Gene Product: February 22nd, 2012
Variation: March 1st, 2012
Gene Model: February 17th, 2012
6 months agoccd8 carotenoid cleavage dioxygenase8: Mutants have mild branching, short stature, small ear size, and narrow-stalk
 
GRMZM2G446858
Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851     Reference: May 23rd, 2017
Gene Product: September 20th, 2012
Variation: September 21st, 2012
Gene Model: September 20th, 2012
6 months agocrti1 carotene isomerase1: enclodes carotene isomerase1
 
GRMZM2G108457
Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851     Reference: May 23rd, 2017
Gene Product: December 10th, 2011
Gene Model: April 8th, 2013
6 months agoggps1 geranylgeranyl pyrophosphate synthase1: part of multigene family encoding geranylgeranyl diphosphate synthase
 
AC194970.5_FG001
Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851     Reference: May 23rd, 2017
Gene Product: April 8th, 2013
Gene Model: April 8th, 2013
6 months agoggps3 geranylgeranyl pyrophosphate synthase3: part of multigene family encoding geranylgeranyl diphosphate synthase
 
GRMZM2G102550
Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851     Reference: May 23rd, 2017
Gene Product: April 8th, 2013
Gene Model: April 8th, 2013
6 months agoippi1 isopentenyl pyrophosphate isomerase1: part of multigene family encoding isopentenyl pyrophosphate isomerase
 
GRMZM2G108285
Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851     Reference: May 23rd, 2017
Gene Product: December 10th, 2011
Gene Model: April 8th, 2013
6 months agoippi2 isopentenyl pyrophosphate isomerase2: part of multigene family encoding isopentenyl pyrophosphate isomerase
 
GRMZM2G145029
Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851     Reference: May 23rd, 2017
Gene Product: December 10th, 2011
Gene Model: April 8th, 2013
6 months agoggps4 geranylgeranyl pyrophosphate synthase4: part of multigene family encoding geranylgeranyl diphosphate synthase
 
GRMZM2G005909
Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851     Reference: May 23rd, 2017
Gene Product: April 8th, 2013
Gene Model: April 8th, 2013
6 months agocyp14 cytochrome P450 14: encodes CYP97C
 
GRMZM5G837869
Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851     Reference: May 23rd, 2017
Gene Product: June 3rd, 2015
Variation: June 3rd, 2015
Gene Model: April 8th, 2013
6 months agocrti3 carotene isomerase3: enclodes carotene isomerase
 
GRMZM2G144273
Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851     Reference: May 23rd, 2017
Gene Product: December 10th, 2011
Gene Model: September 29th, 2014
6 months agonced2 nine-cis-epoxycarotenoid dioxygenase2:
 
GRMZM2G407181
Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851     Reference: May 23rd, 2017
Gene Product: September 20th, 2012
Gene Model: October 4th, 2014
6 months agonced6 nine-cis-epoxycarotenoid dioxygenase6:
 
GRMZM2G110192
Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851     Reference: May 23rd, 2017
Gene Product: September 20th, 2012
Gene Model: October 4th, 2014
6 months agomecs1 methyl erythritol cyclodiphosphate synthase1:
 
GRMZM5G835542
Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851     Reference: May 23rd, 2017
Gene Product: October 4th, 2014
Gene Model: October 4th, 2014
6 months agomab24 math-btb24:
 
GRMZM2G103251
Juranic, M et al. 2012. Plant Cell 24:4974-4991     Reference: February 14th, 2017
Gene Product: June 6th, 2014
Variation: May 23rd, 2017
Gene Model: February 14th, 2017
6 months agomab25 math-btb25:
 
GRMZM2G088086
Juranic, M et al. 2012. Plant Cell 24:4974-4991     Reference: February 14th, 2017
Gene Product: June 6th, 2014
Variation: May 23rd, 2017
Gene Model: February 14th, 2017
6 months agomab26 math-btb26:
 
GRMZM2G161610
Juranic, M et al. 2012. Plant Cell 24:4974-4991     Reference: February 14th, 2017
Gene Product: June 6th, 2014
Variation: May 23rd, 2017
Gene Model: February 14th, 2017
6 months agoptac14 plastid transcriptionally active14: Ortholog of Arabidopsis PTAC14. Associates with Plastid Encoded RNA polymerase (PEP). Required for PEP-mediated transcription. (A. Barkan, 2015)ortholog of Arabidopsis PTAC14, a PEP-associated protein, required for PEP-mediated transcription; cpRNA defects in maize similar to other PEP-deficient mutants
 
GRMZM5G807767
Belcher, S et al. 2015. Biochem Biophys Acta 1847:1004-1016     Reference: December 1st, 2015
Variation: May 21st, 2017
Gene Model: February 17th, 2015
6 months agoppr102 pentatricopeptide repeat102:
 
GRMZM2G012174
  At5g50280 (TAIR)
LOC_Os05g22870 (MSU/TIGR)
Gene Product: December 27th, 2016
Gene Model: May 21st, 2017
6 months agoznfn1 zinc finger protein1:
 
GRMZM2G086277
  At5g52010 (TAIR)
LOC_Os06g07020 (MSU/TIGR)
Gene Product: April 4th, 2017
Gene Model: May 21st, 2017
6 months agoppr36 pentatricopeptide repeat36:
 
GRMZM2G333678
  AT4G19191 (TAIR)
LOC_Os11g14980 (MSU/TIGR)
Gene Product: December 27th, 2016
Gene Model: May 21st, 2017
6 months agoppr61 pentatricopeptide repeat61:
 
GRMZM2G341479
  AT1G09220 (TAIR)
LOC_Os02g49830 (MSU/TIGR)
Gene Product: December 27th, 2016
Gene Model: May 21st, 2017
6 months agopsa2 photosystemI2: thylakoid lumen protein with protein disulfided isomerase activity; mutants lack photosystem I core complex polypeptidesDnaJ-type zinc finger domain protein found in thylakoid lumen. Required for Photosystem I assembly. (A. Barkan, 2015)
 
GRMZM2G021687
Shen, J et al. 2017. Plant Physiol pp.doi: 10.1104/pp.17.00524     Reference: May 20th, 2017
Gene Product: September 1st, 2003
Variation: September 18th, 2014
Gene Model: September 18th, 2014
6 months agopsa3 photosystemI3: Mutants have a pale green seedling phenotype; lacks photosystem I core complex polypeptides
 
GRMZM2G051403
Shen, J et al. 2017. Plant Physiol pp.doi: 10.1104/pp.17.00524   AT3G55250 (TAIR) Reference: May 20th, 2017
Gene Product: May 20th, 2017
Variation: May 20th, 2017
Gene Model: May 20th, 2017
6 months agohcf148 high chlorophyll fluorescence148: Ortholog of Arabidopsis Y3IP1. PSI assembly factor, cooperates with Ycf3. (A. Barkan, 2015)mutants lack photosystem I, pale green seedling lethal; the Arabidopsis ortholog, Y3IP1, is a PSI assembly factor and cooperates with Ycf3
3.06
GRMZM2G002165
Shen, J et al. 2017. Plant Physiol pp.doi: 10.1104/pp.17.00524     Reference: May 20th, 2017
Variation: December 30th, 2015
Gene Model: February 17th, 2015
6 months agopyg7 pale yellowgreen7: mutants are pale yellow green; encodes an assembly factor that interacts with PSA3
 
GRMZM5G809292
Shen, J et al. 2017. Plant Physiol pp.doi: 10.1104/pp.17.00524   AT1G22700 (TAIR) Reference: May 20th, 2017
Gene Product: May 20th, 2017
Variation: May 20th, 2017
Gene Model: May 20th, 2017
6 months agoppr6 pentatricopeptide repeat6:
 
GRMZM2G093291
  At5g27270 (TAIR)
LOC_Os06g02120 (MSU/TIGR)
Gene Product: December 27th, 2016
Gene Model: May 20th, 2017
6 months agoppr13 pentatricopeptide repeat13:
 
GRMZM2G099604
  At2g02980 (TAIR)
LOC_Os03g58100 (MSU/TIGR)
Gene Product: December 27th, 2016
Gene Model: May 20th, 2017
6 months agoppr100 pentatricopeptide repeat100:
 
GRMZM2G428579
  At2g01860 (TAIR)
LOC_Os02g02590 (MSU/TIGR)
Gene Product: December 27th, 2016
Gene Model: May 20th, 2017
6 months agoak2 ankyrin repeat protein2:
4.10
GRMZM2G019838
  At5g40160 (TAIR)
LOC_Os06g13000 (MSU/TIGR)
Variation: September 25th, 2007
Gene Model: May 20th, 2017

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