Newly Characterized Genes

CHECK HERE FOR DESCRIPTIONS OF NEWLY CHARACTERIZED MAIZE GENES!

With the overwhelming number of genes that are being discovered by phenotypic and sequence analyses, the MaizeGDB staff is missing some that should be included in MaizeGDB. We need your help! Please let us know about new genes that you're working on or have recently read about.

MaizeGDB prefers not to assign formal gene names to gene models based purely on orthology. Known difficulties include inclusivity (there are over 10,000 functionally characterized Arabidopsis genes)* and some likelihood of errors in inferred functions. Unlike gene models, gene names are generally conserved unless differently named genes are found to be allelic. Of particular note, naming priveleges are customarily held by researchers who first confirm function.

We encourage researchers to use the annotation tool on the MaizeGDB gene model pages to add their insights about putative function, especially when not currently part of the Phytozome or Gramene pipelines.

Below is a list of newly reported or newly characterized genes (new reference, new gene product, and/or new variation) with which you may not yet be familiar. The genes are sorted by the last time the gene has been updated. To suggest genes for inclusion in this list, email us and include the gene name, full name, chromosome or bin, and a recent reference.

If you cannot find the gene you would like to recommend in the database, send us an email so that we can add it to the database!

This page is based on our monthly release. The updates are made around 4:00am CST.


         Recommended Genes


Most recent data | Six months | One year | All time

New or updated genes since six months ago. The cutoff date is December 18th, 2017.

Last UpdateGeneFull Name : DescriptionChromosome
or Bin
Gene
Model
Recent ReferenceOrthologsUpdate information
2 days agobnlg1879  :
5.01
GRMZM5G811408
    Variation: September 1st, 2003
Gene Model: June 16th, 2018
2 days agocol3 C2C2-CO-like-transcription factor 3: Functions as a repressor of flowering
 
   Song, NN et al. 2018. Gene pp.doi: 10.1016/j.gene.2018.06.032     Reference: June 16th, 2018
Gene Product: December 27th, 2017
2 days agoiaa22 Aux/IAA-transcription factor 22: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.03
GRMZM2G128421
Ludwig, YC et al. 2014. PLoS One 9:e107346     Reference: September 10th, 2014
Variation: September 1st, 2003
Gene Model: June 16th, 2018
2 days agocol16 C2C2-CO-like-transcription factor 16:
1.06
GRMZM2G159996
Song, NN et al. 2018. Gene pp.doi: 10.1016/j.gene.2018.06.032     Reference: June 16th, 2018
Variation: December 7th, 2016
Gene Model: December 7th, 2016
2 days agocol12 2C2-CO-like-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.NCBI: zinc finger protein CONSTANS-LIKE 16
5.07
GRMZM2G041991
Song, NN et al. 2018. Gene pp.doi: 10.1016/j.gene.2018.06.032     Reference: June 16th, 2018
Gene Product: September 1st, 2003
Variation: March 31st, 2017
Gene Model: March 31st, 2017
2 days agoconz1 constans1: homologous to photoperiod genes constans (co) from Arabiodopsis and heading date 1 (hd1) in rice. (Miller 2008)
9.03
   Song, NN et al. 2018. Gene pp.doi: 10.1016/j.gene.2018.06.032     Reference: June 16th, 2018
Variation: July 28th, 2008
3 days agobnlg565  : similar to Arabidopsis folate transporter 1
5.01
GRMZM5G840435
    Variation: September 1st, 2003
Gene Model: June 15th, 2018
3 days agoga2 gametophyte factor2: Ga2 pollen grains are competitively superior to ga2 on Ga2 silks.
5.04
   Wang, M et al. 2018. Int J Mol Sci 19:E1757     Reference: June 15th, 2018
Variation: September 29th, 2016
3 days agowtf2 what's this factor2:
5.01
AC210013.4_FG013
  At5g62990 (TAIR)
LOC_Os04g24710 (MSU/TIGR)
Variation: September 1st, 2003
Gene Model: June 15th, 2018
3 days agomyb37 MYB-transcription factor 37: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.01
GRMZM2G455869
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: June 15th, 2018
3 days agoshai1 shohai1: loss of function mutants cause variable morphological defects in the embryo including small scutellum, shoot axis bifurcation and arrest during early organogenesis
 
   Mimura, M et al. 2018. Plant J pp.doi: 10.1111/tpj.13996     Reference: June 15th, 2018
Gene Product: June 15th, 2018
Variation: June 15th, 2018
3 days agoumc1679  :
5.01
AC210013.4_FG018
    Variation: September 1st, 2003
Gene Model: June 15th, 2018
3 days agozmm15 Zea mays MADS-box 15:
5.01
GRMZM2G553379
Muenster, T et al. 2002. Maydica 47:287-301     Reference: May 8th, 2012
Variation: June 15th, 2018
Gene Model: June 15th, 2018
3 days agoumc107b(croc)  :
5.01
GRMZM2G090172
Grant, D et al. 1993. MNL 67:55-61     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Gene Model: June 15th, 2018
3 days agommp43  :
5.01
GRMZM2G090573
    Variation: June 15th, 2018
Gene Model: June 15th, 2018
3 days agoAY109733  :
5.01
GRMZM2G130544
    Variation: July 29th, 2004
Gene Model: June 15th, 2018
4 days agocrti3 carotene isomerase3: enclodes carotene isomerase
5.00
GRMZM2G144273
Gonzalez-Jorge, S et al. 2016. Plant Physiol 171:1837-1851     Reference: May 23rd, 2017
Gene Product: December 10th, 2011
Gene Model: June 14th, 2018
4 days agosbp6 SBP-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.00
GRMZM2G138421
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 18th, 2014
Variation: September 1st, 2003
Gene Model: June 14th, 2018
4 days agoarf1 ADP-ribosylation factor homolog1: cDNA similar to ARF family of GTP binding proteins
5.00
GRMZM2G395844
Verwoert, IIGS; Brown, A; Slabas, AR; Stuitje, AR. 1995. Plant Mol Biol 27:629-633     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: June 14th, 2018
4 days agoca3p4 CCAAT-HAP3-transcription factor 34: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, BM et al. 2018. Frontiers Plant Sci 9:709     Reference: June 14th, 2018
Gene Product: August 9th, 2016
4 days agobnl8.33  :
5.00
GRMZM2G420823
Grant, D et al. 1993. MNL 67:55-61     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: June 14th, 2018
5 days agoumc1253  :
5.00
GRMZM2G084164
    Variation: September 1st, 2003
Gene Model: June 13th, 2018
5 days agoumc1325  :
5.00
GRMZM2G144109
Beavis, WD et al. 1991. Theor Appl Genet 83:141-145     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: June 13th, 2018
5 days agoumc1445  :
5.00
GRMZM2G121840
    Variation: September 1st, 2003
Gene Model: June 13th, 2018
5 days agoAI676903  :
5.00
GRMZM5G862317
    Variation: July 29th, 2004
Gene Model: June 13th, 2018
5 days agoAY110625  :
5.00
GRMZM2G305216
    Variation: September 25th, 2007
Gene Model: June 13th, 2018
6 days agoincw1 cell wall invertase1: full-length cDNA, similar to tobacco and carrot cell-wall invertase; Northerns specific to cell suspension and developing endosperm 28-32 DAP; expressed protein cross-reacts with antibodies to carrot cell-wall invertase; low copy number
5.04
   Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Variation: May 27th, 2015
6 days agomn1 miniature seed1: small, somewhat defective kernel, fully viable; invertase reduced
2.04
   Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Variation: April 13th, 2015
6 days agoincw3 invertase cell wall3: genomic sequence (GenBank); SSR umc1053
10.04
   Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Variation: October 7th, 2015
6 days agoincw4 invertase cell wall4: genomic sequence (Genbank)similar to Arabidopsis beta-fructofuranosidase, insoluble isoenzyme CWINV3
2.01
GRMZM2G119941
Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Variation: May 23rd, 2005
Gene Model: May 27th, 2015
6 days agoinvan7 invertase alkaline neutral7:
1.03
GRMZM2G084940
Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Gene Model: August 11th, 2017
6 days agoivr1 invertase1: cDNA, genomic clones similar to soluble plant invertase; induced by sugar depletion
2.03
   Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Variation: September 1st, 2003
6 days agoinvan5 invertase alkaline neutral5:
2.05
GRMZM2G115451
Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Gene Model: June 12th, 2018
6 days agoincw5 invertase cell wall5:
 
GRMZM2G095725
Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5   LOC_Os04g33740 (MSU/TIGR) Reference: June 12th, 2018
Gene Product: June 12th, 2018
Variation: August 16th, 2017
Gene Model: August 16th, 2017
6 days agoivr3 invertase3:
 
GRMZM2G463871
Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Gene Model: June 12th, 2018
6 days agoincw6 invertase cell wall6:
 
GRMZM2G018692
Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Gene Model: June 12th, 2018
6 days agoincw7 invertase cell wall7:
 
GRMZM2G018716
Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Gene Model: June 12th, 2018
6 days agoinvan1 invertase alkaline neutral1:
 
GRMZM2G136139
Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Gene Model: June 12th, 2018
6 days agoinvan2 invertase alkaline neutral2:
 
GRMZM2G118737
Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Gene Model: June 12th, 2018
6 days agoinvan3 invertase alkaline neutral3:
 
GRMZM2G170842
Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Gene Model: June 12th, 2018
6 days agoinvan4 invertase alkaline neutral4:
 
GRMZM2G007277
Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Gene Model: June 12th, 2018
6 days agoinvan6 invertase alkaline neutral6:
 
GRMZM2G477236
Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Gene Model: June 12th, 2018
6 days agoinvan8 invertase alkaline neutral8:
 
GRMZM2G040843
Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Gene Model: June 12th, 2018
6 days agoinvan9 invertase alkaline neutral9:
 
GRMZM2G022782
Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Gene Model: June 12th, 2018
6 days agoinvan10 invertase alkaline neutral10:
 
GRMZM2G084694
Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Gene Model: June 12th, 2018
6 days agoincw8 invertase cell wall8:
3.05
GRMZM2G174249
Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Variation: September 25th, 2007
Gene Model: June 12th, 2018
6 days agoivr2 invertase2: genomic and cDNA for soluble invertase, single band on Southerns, upregulated by increased carbohydrate levels
5.03
   Juarez-Colunga, S et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0746-5     Reference: June 12th, 2018
Gene Product: June 12th, 2018
Variation: May 18th, 2012
7 days agoumc42a  :
4.05
GRMZM2G038046
Doebley, JF et al. 1992. MNL 66:95     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: June 11th, 2018
7 days agosbp3 (GRASSIUS) SBP-transcription factor 3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.03
GRMZM2G106798
Li, YX, et al. 2016. Plant J. 86:391-402     Reference: November 3rd, 2016
Gene Product: December 18th, 2014
Gene Model: June 11th, 2018
7 days agobhlh141 bHLH-transcription factor 141: similar to Arabidopsis transcription factor bHLH78Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.03
GRMZM2G080168
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: June 11th, 2018
Gene Model: June 11th, 2018
7 days agoppr346 pentatricopeptide repeat protein346:
 
GRMZM2G129783
Yu, HQ et al. 2018. Physiology and Molecular Biology of Plants pp.doi: 10.1007/s12298-018-0546-z     Reference: June 11th, 2018
Gene Product: December 27th, 2016
Gene Model: June 11th, 2018
8 days agoumc1963  :
4.04
GRMZM2G171311
    Variation: September 1st, 2003
Gene Model: June 10th, 2018
8 days agoabi47 ABI3-VP1-transcription factor 47: Grimault named this locus ZmAFL6 by homology to Arabidopsis, 2015Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models
4.08
GRMZM2G125596
Grimault, A et al. 2015. Plant Sci 236:116-125     Reference: July 29th, 2015
Gene Product: July 29th, 2015
Gene Model: June 10th, 2018
9 days agortcs1 rootless concerning crown and seminal roots1: root system reduced solely to a primary root yet plants can be carried to seed; cyclin cDNAs absent; naphthalene acetic acid induces adventitious roots
1.02
GRMZM2G092542
Huang, J et al. 2018. BMC Plant Biology 18:111     Reference: June 9th, 2018
Gene Product: October 5th, 2009
Variation: October 5th, 2009
Gene Model: July 23rd, 2013
9 days agochr101 chromatin complex subunit A 101:
2.10
   Fu, FF et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00053     Reference: June 9th, 2018
Variation: June 9th, 2018
9 days agobm3 brown midrib3: like bm1; has lowered activity of caffeic acid O-methyl transferase; application: modified lignin has improved digestibility in ruminants; silage corn with bm3 is in production. However, bm3 results in weaker stalks, reduced stover and grain yield, and in some cases reduced maturity; these effects appear genotype-specific
4.04
GRMZM5G814904
Wu, ZY et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery208     Reference: June 4th, 2018
Gene Product: February 16th, 2011
Variation: October 27th, 2015
Gene Model: June 9th, 2018
9 days agotcrr1 transfer cell response regulator1: basal endosperm transfer cell specific transcript; encoded protein is found other cells, the conducting cells above the transfer layer, and immature cells adjacent to the transfer layer
4.05
GRMZM2G016145
Huang, J et al. 2018. BMC Plant Biology 18:111     Reference: June 9th, 2018
Variation: December 31st, 2015
Gene Model: December 31st, 2015
9 days agoo2 opaque endosperm2: like o1; high lysine content; regulates b-32 protein (see rip1); reduced lysine degradation (lysine-ketoglutaric reductase); SSRs phi057, 112
7.01
   Huang, J et al. 2018. BMC Plant Biology 18:111     Reference: June 9th, 2018
Gene Product: September 1st, 2003
Variation: June 6th, 2016
9 days agotb1 teosinte branched1: many tillers; ear branches tassel-like; affects apical dominanceGRASSIUS: TCP transcription factor (TCP1)
1.09
   Huang, J et al. 2018. BMC Plant Biology 18:111     Reference: June 9th, 2018
Gene Product: September 14th, 2016
Variation: February 2nd, 2017
9 days agovp1 viviparous1: embryo fails to become dormant, viable if transplanted; some alleles dormant; chlorophyll and carotenoids unaffected; anthocyanins in aleurone suppressed (aka vp4); cDNA
3.05
   Huang, J et al. 2018. BMC Plant Biology 18:111     Reference: June 9th, 2018
Gene Product: July 29th, 2015
Variation: August 22nd, 2013
9 days agopbf1 prolamin-box binding factor1: endosperm cDNA, SSR umc1065
2.06
   Huang, J et al. 2018. BMC Plant Biology 18:111     Reference: June 9th, 2018
Gene Product: September 1st, 2003
Variation: April 20th, 2005
9 days agons1 narrow sheath1: plant brachytic, duplicate factor with ns2; leaf sheath and blade taper, blade widens toward tip; husks narrowed, ears exposed
2.05
   Huang, J et al. 2018. BMC Plant Biology 18:111     Reference: June 9th, 2018
Gene Product: August 25th, 2017
Variation: February 20th, 2015
9 days agomet2 DNA methyl transferase2:
10.06
GRMZM2G025592
Fu, FF et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00053     Reference: June 9th, 2018
Gene Product: April 6th, 2018
Variation: June 9th, 2018
Gene Model: November 16th, 2011
9 days agomet5 DNA methyl transferase5:
2.02
GRMZM2G005310
Fu, FF et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00053     Reference: June 9th, 2018
Gene Product: April 6th, 2018
Variation: June 9th, 2018
Gene Model: December 22nd, 2014
9 days agochr106 chromatin complex subunit A 106:
1.10
GRMZM2G071025
Fu, FF et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00053     Reference: June 9th, 2018
Variation: June 9th, 2018
Gene Model: December 22nd, 2014
10 days agoumc1707  :
4.11
GRMZM2G167149
    Variation: June 7th, 2018
Gene Model: June 8th, 2018
10 days agoumc1757  :
4.01
GRMZM5G877647
    Variation: September 1st, 2003
Gene Model: June 8th, 2018
10 days agocyp25 cytochrome P-450 25:
4.09
GRMZM2G070508
Yoneyama, K et al. 2018. New Phytol pp.doi: 10.1111/nph.15055     Reference: February 27th, 2018
Gene Product: February 26th, 2018
Gene Model: June 8th, 2018
10 days agoumc1953  :
4.05
GRMZM2G166711
    Variation: September 1st, 2003
Gene Model: June 8th, 2018
10 days agoumc19  :
4.07
GRMZM2G125838
Beavis, WD et al. 1991. Theor Appl Genet 83:141-145     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: June 8th, 2018
11 days agoumc1101  :
4.09
GRMZM2G041310
    Variation: September 1st, 2003
Gene Model: June 7th, 2018
11 days agocsd2 CSD-transcription factor 2: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.10
GRMZM2G389768
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: June 7th, 2018
11 days agoumc1132  : similar to Arabidopsis RNA recognition motif-containing protein
4.08
GRMZM2G131957
    Variation: September 1st, 2003
Gene Model: June 7th, 2018
11 days agoumc1303  :
4.05
GRMZM2G377165
    Variation: September 1st, 2003
Gene Model: June 7th, 2018
11 days agoumc1346  :
4.05
GRMZM2G366392
    Variation: September 1st, 2003
Gene Model: June 7th, 2018
11 days agoumc1650  :
4.09
GRMZM2G121495
    Variation: September 1st, 2003
Gene Model: June 7th, 2018
11 days agoumc1652  :
4.04
GRMZM5G852329
    Variation: September 1st, 2003
Gene Model: June 7th, 2018
11 days agotrpp4 trehalose-6-phosphate phosphatase4:
4.08
GRMZM2G151044
Zhou, ML et al. 2014. J Plant Growth Reg 33:256-271     Reference: June 26th, 2014
Gene Product: September 15th, 2013
Variation: September 1st, 2003
Gene Model: June 7th, 2018
11 days agoumc1669  :
4.01
GRMZM2G037472
    Variation: September 1st, 2003
Gene Model: June 7th, 2018
11 days agoumc1702  : similar to Arabidopsis RNA recognition motif-containing protein
4.05
GRMZM2G125529
    Variation: September 1st, 2003
Gene Model: June 7th, 2018
11 days agoumc15a  :
4.08
GRMZM2G013128
Albertsen, MC et al. 1996. MNL 70:30     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: June 7th, 2018
12 days agopif3 phytochrome interacting factor3: ortholog of Arabidopsis PIF3; nuclear localized protein; transgenic expression in rice suggest role in stress response (Gao Y et al 2015)
 
GRMZM2G387528
Gao, Y et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-018-0739-4   AT1G09530 (TAIR)
LOC_Os05g04740 (MSU/TIGR)
Reference: June 6th, 2018
Gene Product: September 14th, 2016
Gene Model: May 26th, 2015
14 days agobm2 brown midrib2: brown pigmentation in the leaf midrib and tissues accumulate reduced levels of lignin; like bm1cDNA complements yeast met12 met13 mutant; one of two or more loci, second locus may be on chromosome 5 near gln4
1.11
GRMZM2G099363
Wu, ZY et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery208     Reference: June 4th, 2018
Gene Product: August 28th, 2012
Variation: November 30th, 2013
Gene Model: November 30th, 2013
14 days agovp8 viviparous8: embryo fails to become dormant; chlorophyll and carotenoids unaffected; small, pointed-leaf seedlings
1.11
   Li, JP et al. 2018. J Integrative Agriculture doi: 10.1016/S2095-3119(18)61959-8     Reference: June 4th, 2018
Gene Product: November 29th, 2012
Variation: June 4th, 2018
14 days agoomt2 Caffeoyl CoA O-methyltransferase2:
9.02
GRMZM2G099363
Wu, ZY et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery208     Reference: June 4th, 2018
Gene Product: January 5th, 2014
Variation: May 13th, 2016
Gene Model: September 17th, 2014
16 days agopip1a plasma membrane intrinsic protein1:
2.03
GRMZM2G174807
Zhou, L et al. 2018. PLoS One 13:e0198639     Reference: June 2nd, 2018
Gene Product: September 1st, 2003
Variation: June 6th, 2005
Gene Model: October 29th, 2014
17 days agovp5 viviparous5: like vp2cDNA, strongest hybridization to this site; other sites are near o2, bnl17.25 and dup103; encodes a 2-step phytoene desaturase; SSR umc1070
1.02 - 1.02
   Burkhow, SJ et al. 2018. Plant Methods 14:37     Reference: June 1st, 2018
Gene Product: December 13th, 2011
Variation: March 4th, 2014
17 days agohox1 homeobox1: cDNA Zmhox1a, meristem specific, nuclear, protein product binds to feedback control element of sh1 promoter; SSR's umc1309, umc1343
8.05
GRMZM2G136369
Han, ZX et al. 2018. Genetics pp.doi: 10.1534/genetics.118.300987     Reference: June 1st, 2018
Gene Product: September 1st, 2003
Variation: June 26th, 2014
Gene Model: June 25th, 2014
17 days agomeg4 maternally expressed gene4: Maternally transmitted alleles preferentially expressed in endosperm
7.02
GRMZM5G896560
Han, ZX et al. 2018. Genetics pp.doi: 10.1534/genetics.118.300987     Reference: June 1st, 2018
Variation: October 25th, 2009
Gene Model: August 29th, 2014
18 days agogst2 glutathione S-transferase2: safener-induced; heterodimer; 2 map sites have been reported on chr 8 and 10
10.03
GRMZM2G132093
Sun, LL et al. 2018. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2018.05.025     Reference: May 31st, 2018
Gene Product: September 1st, 2003
Variation: July 7th, 2010
Gene Model: October 29th, 2015
18 days agomrpa1 multidrug resistance protein associated1: ATP-binding cassette (ABC) transporter
2.09
GRMZM2G113203
Sun, LL et al. 2018. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2018.05.025     Reference: May 31st, 2018
Variation: July 30th, 2013
Gene Model: February 6th, 2015
18 days agogst5 glutathione transferase5: cDNA, safener-induced; high activity with fluorodifen herbicide
1.11
GRMZM2G308687
Sun, LL et al. 2018. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2018.05.025     Reference: May 31st, 2018
Gene Product: September 1st, 2003
Variation: July 22nd, 2010
Gene Model: July 27th, 2016
18 days agogst6 glutathione transferase6: cDNA, functionally expressed in E. coli
7.01
GRMZM2G129357
Sun, LL et al. 2018. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2018.05.025     Reference: May 31st, 2018
Gene Product: September 1st, 2003
Variation: July 22nd, 2010
Gene Model: July 27th, 2016
18 days agogsht1 glutathione transporter1:
 
GRMZM2G421491
Sun, LL et al. 2018. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2018.05.025     Reference: May 31st, 2018
Gene Product: April 23rd, 2013
Gene Model: April 23rd, 2013
18 days agoelfa9 elongation factor 1-alpha9: shares 89-99% nucleotide sequence identity with genes elf1a to alf1g (aka clones eEF1Aa to eEF1Ag).
9.03
GRMZM2G153541
Sun, LL et al. 2018. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2018.05.025     Reference: May 31st, 2018
Gene Product: September 1st, 2003
Variation: April 14th, 2014
Gene Model: April 15th, 2014
18 days agocyp15 cytochrome P450 15: encodes CYP97B
4.09
GRMZM2G010221
Venado, R et al. 2017. Mol Breed pp.doi: 10.1007/s11032-017-0723-8     Reference: September 26th, 2017
Gene Product: April 29th, 2013
Gene Model: May 31st, 2018
18 days agogst12 glutathione S-transferase12: One of 12 Type I GSTs typed by sequence similarity
1.01
GRMZM2G096269
Sun, LL et al. 2018. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2018.05.025     Reference: May 31st, 2018
Gene Product: September 1st, 2003
Variation: March 17th, 2006
Gene Model: July 27th, 2016
18 days agogst27 glutathione transferase27:
8.05
GRMZM2G077206
Sun, LL et al. 2018. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2018.05.025     Reference: May 31st, 2018
Gene Product: September 1st, 2003
Variation: August 20th, 2010
Gene Model: October 9th, 2014
18 days agogst31 glutathione transferase31: glutathione S-transferase subunit 31; matches PCO132874 (in silico from AF244696) placed by overgo on chromosome 1
1.01
GRMZM2G475059
Sun, LL et al. 2018. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2018.05.025     Reference: May 31st, 2018
Gene Product: September 1st, 2003
Variation: August 21st, 2010
Gene Model: April 27th, 2016
18 days agogst1 glutathione-S-transferase1: presence-absence of isozyme bands between inbred lines, members of a family of polymorphic bands; transcripts correlate with dimer isoforms; single copy in Southerns; SSRs phi080, phi015, umc1069
8.08 - 8.09
   Sun, LL et al. 2018. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2018.05.025     Reference: May 31st, 2018
Gene Product: September 1st, 2003
Variation: September 1st, 2003
18 days agogst4 glutathione S-transferase4: constitutive and major subunit;amino acid sequence, cDNA sequence, transgenic expression, single or low copy gene, SSR phi073.
3.05
   Sun, LL et al. 2018. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2018.05.025     Reference: May 31st, 2018
Gene Product: September 1st, 2003
Variation: August 17th, 2010
19 days agomyb19 MYB-transcription factor 19: myb sequence homology; moderate copy number
4.06
GRMZM5G833253
Agarwal, T et al. 2016. Sci. Rep. 6:28502     Reference: June 23rd, 2016
Gene Product: July 25th, 2017
Variation: September 1st, 2003
Gene Model: May 30th, 2018
19 days agocdpk29 calcium dependent protein kinase29: pollen-specific expression; involved in the regulation of pollen germination and tube extension
 
GRMZM2G332660
Li, J et al. 2018. PLoS One 13:e0195787     Reference: May 30th, 2018
Gene Product: December 3rd, 2013
Gene Model: May 30th, 2018
19 days agocdpk2 calcium dependent protein kinase2: genomic and cDNA clones; genomic sequence similar to plant CDPK; pollen-specific expression; possibly two copies (Southern blot); antisense oligonucleotides disrupt pollen tubes
2.05
GRMZM2G365815
Li, J et al. 2018. PLoS One 13:e0195787     Reference: May 30th, 2018
Gene Product: December 3rd, 2013
Variation: November 21st, 2013
Gene Model: March 31st, 2015
20 days agoerd3 early responsive to dehydration3: tissue-specific expression; induced by abiotic stress treatments
 
GRMZM2G144155
Song, XQ et al. 2018. Iranian J Biotech 16:e1593   AT4G19120 (TAIR) Reference: May 29th, 2018
Gene Product: May 29th, 2018
Gene Model: May 29th, 2018
23 days agocpd1 carbohydrate partitioning defective1: semi-dominant mutant associated with reduced carbohydrate transport, including chlorosis and excessive starch and soluble sugars in leaves
 
   Julius, BT et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery203     Reference: May 26th, 2018
Variation: May 26th, 2018
24 days agocah2 carbonic anhydrase2: with cah1 promotes leaf CO2 availability for photosynthesis (Studer et al 2014)
 
GRMZM2G348512
Kolbe, AR et al. 2018. Plant Physiol pp.doi: 10.1104/pp.18.00176     Reference: May 25th, 2018
Gene Product: August 5th, 2014
Variation: May 25th, 2018
Gene Model: July 31st, 2014
24 days agocah1 carbonic anhydrase1: C4 carbonic anhydrase; higher transcripts in mesophyll cells (Tausta 2014); double mutants with cah2 virutally remove this activity from leaf (Studer et al 2014).
 
GRMZM2G121878
Kolbe, AR et al. 2018. Plant Physiol pp.doi: 10.1104/pp.18.00176     Reference: May 25th, 2018
Gene Product: August 5th, 2014
Variation: May 25th, 2018
Gene Model: July 31st, 2014
28 days agocg1 corngrass1: semidominant Cg1 plants have narrow leaves, extreme tilleringCg1 encodes two tandem miR156 genes that are overexpressed in the meristem and lateral organs. George Chuck, 2007
3.02
GRMZM2G022489
Wu, QY et al. 2018. Curr Opin Plant Biol 45:26-35     Reference: May 21st, 2018
Gene Product: June 17th, 2016
Variation: August 25th, 2011
Gene Model: April 5th, 2013
Recommended by George Chuck:
September 25th, 2007
28 days agoct2 compact plant2: semi-dwarf plant, 1/3 height; shortened internodes; club tassel, fasciated ear
1.01 - 1.02
GRMZM2G064732
Wu, QY et al. 2018. Curr Opin Plant Biol 45:26-35     Reference: May 21st, 2018
Gene Product: September 16th, 2013
Variation: September 20th, 2013
Gene Model: September 16th, 2013
28 days agopep1 phosphoenolpyruvate carboxylase1: cytosolic C4 isozyme; single copy, similar to C3-PEPCase genes; cDNA complements E. coli mutant; genomic and partial amino acid sequences compare; SSR phi065
9.03
   Qu, MN et al. 2018. Sci. Rep. 8:7849     Reference: May 21st, 2018
Gene Product: September 1st, 2003
Variation: May 11th, 2018
28 days agotd1 thick tassel dwarf1: shortened plants, fasciated ears, increased spikelet density in tassel
5.03
GRMZM2G300133
Wu, QY et al. 2018. Curr Opin Plant Biol 45:26-35     Reference: May 21st, 2018
Gene Product: October 22nd, 2012
Variation: October 23rd, 2012
Gene Model: October 22nd, 2012
28 days agoub3 unbranched3: double mutant shows decrease in tassel branch number
 
   Wu, QY et al. 2018. Curr Opin Plant Biol 45:26-35     Reference: May 21st, 2018
Gene Product: December 18th, 2014
Variation: December 17th, 2014
28 days agoub2 unbranched2: double mutant shows decrease in tassel branch number
 
   Wu, QY et al. 2018. Curr Opin Plant Biol 45:26-35     Reference: May 21st, 2018
Gene Product: December 18th, 2014
Variation: December 17th, 2014
28 days agofea4 fasciated ear4: Mutants are semidwarfed with fasciated ears and tassels as well as greatly enlarged vegetative and inflorescence meristems.
 
   Wu, QY et al. 2018. Curr Opin Plant Biol 45:26-35     Reference: May 21st, 2018
Gene Product: January 27th, 2015
Variation: July 7th, 2017
28 days agomdh6 malate dehydrogenase6: mesophyll cells, C4 photosynthesis; a second copy may not function in photosynthesis
1.07
GRMZM2G129513
Qu, MN et al. 2018. Sci. Rep. 8:7849     Reference: May 21st, 2018
Gene Product: September 23rd, 2014
Variation: August 31st, 2010
Gene Model: October 24th, 2013
28 days agome3 NADP malic enzyme3: chloroplast C4-photosynthesis, delivers CO2 to ribulose bisphosphate carboylase
3.02
   Qu, MN et al. 2018. Sci. Rep. 8:7849     Reference: May 21st, 2018
Gene Product: August 21st, 2014
Variation: September 1st, 2003
28 days agofea2 fasciated ear2: ear fasciated, broadened and flattened at the tip; rows irregular; similar to CLAVATA 2 of Arabidopsis thaliana
4.05
   Wu, QY et al. 2018. Curr Opin Plant Biol 45:26-35     Reference: May 21st, 2018
Gene Product: December 20th, 2004
Variation: February 11th, 2013
28 days agofea3 fasciated ear3: ear tip broad and branched, typically splitting and showing ring fasciation to form a hollow ear.
 
GRMZM2G166524
Wu, QY et al. 2018. Curr Opin Plant Biol 45:26-35   At3g25670 (TAIR)
LOC_Os01g02060 (MSU/TIGR)
Reference: May 21st, 2018
Gene Product: May 21st, 2016
Variation: May 18th, 2016
Gene Model: May 18th, 2016
28 days agofcp1 fon2-like cle protein1: mutants have a fasciated ear phenotype
 
GRMZM2G165836
Wu, QY et al. 2018. Curr Opin Plant Biol 45:26-35   LOC_Os04g39770 (MSU/TIGR)
Os04g0473800 (Gramene)
Reference: May 21st, 2018
Gene Product: May 21st, 2016
Variation: May 22nd, 2016
Gene Model: May 21st, 2016
28 days agocrn1 coryne1: involved in shoot apical meristem (SAM) development; functions downstream of fea2; mutants develop fasciated ears
 
GRMZM2G032132
Wu, QY et al. 2018. Curr Opin Plant Biol 45:26-35   AT5G13290 (TAIR) Reference: May 21st, 2018
Gene Product: January 24th, 2013
Gene Model: May 21st, 2018
28 days agogif1 growth-regulating-factor-interacting factor1: mutants are semi-dwarf with narrow leaves and fasciated inflorescence meristems
1.10
GRMZM2G180246
Wu, QY et al. 2018. Curr Opin Plant Biol 45:26-35   AT5G28640 (TAIR)
LOC_Os03g52320 (MSU/TIGR)
Reference: May 21st, 2018
Gene Product: July 6th, 2015
Variation: February 6th, 2018
Gene Model: July 6th, 2015
28 days agodcl101 dicer-like 101: mutant plants have 'fuzzy tassel' and reduced stature.
1.01
GRMZM2G040762
Wu, QY et al. 2018. Curr Opin Plant Biol 45:26-35     Reference: May 21st, 2018
Gene Product: September 5th, 2006
Variation: December 4th, 2014
Gene Model: November 12th, 2014
31 days agobzip100 bZIP-transcription factor 100: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zong, N et al. 2018. J Integrative Agriculture doi: 10.1016/S2095-3119(18)61947-1     Reference: May 18th, 2018
Gene Product: January 27th, 2015
32 days agomtl1 metallothionein1: genomic clone, transcriptional and translation start sites mapped, Northern blots, similar to other class-I metallothioneins, root specific; SSR phi072, umc1008
4.00
GRMZM2G164229
Duan, LA et al. 2018. Biometals doi: 10.1007/s10534-018-0100-z     Reference: May 17th, 2018
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: April 9th, 2015
32 days agopht2 phosphate transporter protein2:
1.08
GRMZM2G154090
Liu, F et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy094     Reference: May 17th, 2018
Gene Product: June 16th, 2016
Variation: February 4th, 2011
Gene Model: May 27th, 2015
33 days agobrd1 brassinosteroid-deficient dwarf1: Mutant plants have essentially no internode elongation and exhibit no etiolation response when germinated in the dark.
 
GRMZM2G103773
Castorina, G et al. 2018. Ann Bot pp.doi: 10.1093/aob/mcy047     Reference: May 16th, 2018
Gene Product: February 18th, 2012
Variation: March 5th, 2012
Gene Model: February 15th, 2012
34 days agoabp1 auxin binding protein1: putative auxin receptor, single band in Southerns, endoplasmic reticulum and plasma membrane locales (aka axr1, aux311)Dominant Scmv1 and Scmv2 confer resistance
3.05 - 3.05
   Gustafson, T et al. 2018. Crop Sci pp.doi: 10.2135/cropsci2017.11.0675     Reference: May 15th, 2018
Gene Product: September 1st, 2003
Variation: August 23rd, 2017
34 days agomdm1 maize dwarf mosaic virus resistance1: dominant Mdm1 plants resistant
6.01
   Gustafson, T et al. 2018. Crop Sci pp.doi: 10.2135/cropsci2017.11.0675     Reference: May 15th, 2018
Variation: September 1st, 2003
34 days agoscmv1 resistance to sugarcane mosaic virus1: resistance requires dominant factors Scm1 and Scm2; resistance in various inbreds is concordant for SCMV and MDMV, yet recombinants of Scm1 occur with the NOR, whereas none were found for Mdm1 by Simcox et al. (1995)
6.00 - 6.01
GRMZM2G014055
Gustafson, T et al. 2018. Crop Sci pp.doi: 10.2135/cropsci2017.11.0675     Reference: May 15th, 2018
Gene Product: September 1st, 2003
Variation: June 29th, 2005
Gene Model: September 7th, 2017
34 days agowox2a WUSCHEL-related homeobox 2a`: embryonic transcription factor (Nardmann et al 2007)
 
   Ma, LL et al. 2018. Frontiers Plant Sci 9:561     Reference: May 15th, 2018
Gene Product: August 25th, 2017
35 days agodv1 divergent spindle1: chromosomes unoriented at metaphase I; partial male and female sterility; encodes a kinesin-14A motor protein
2.02
GRMZM2G114861
Gicking, AM et al. 2018. FEBS Lett pp.doi: 10.1002/1873-3468.13094     Reference: May 14th, 2018
Gene Product: November 10th, 2017
Variation: August 17th, 2016
Gene Model: August 13th, 2014
37 days agomatl1 matrilineal1: encodes a pollen-specific phospholipase; novel edits lead to a 6.7% haploid induction rate
 
GRMZM2G062320
Tian, XL et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery177/4995035     Reference: May 12th, 2018
Gene Product: March 14th, 2017
Variation: February 10th, 2017
Gene Model: January 25th, 2017
39 days agogln6 glutamine synthetase6: cytosolic GS1-1 isoform, gene specific cDNA probe, 6-member nuclear gene family
1.02 - 1.03
GRMZM2G050514
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Variation: December 7th, 2012
Gene Model: August 7th, 2014
39 days agogdh1 glutamic dehydrogenase1: electrophoretic mobility; null allele is known (cold sensitivity); intra/interlocus hybrid bands occur - merge with GenBank sequences inferred by overgo map location matches
1.11
   Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Variation: August 7th, 2006
39 days agogdh2 glutamic dehydrogenase2: electrophoretic mobility; intralocus hybrid bands occur
10.02 - 10.04
GRMZM2G427097
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Variation: October 6th, 2015
Gene Model: October 6th, 2015
39 days agonnr2 nitrate reductase2: partial cDNA from seedling root cDNA similar to nitrate reductase
5.07
GRMZM5G878558
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Variation: October 26th, 2010
Gene Model: May 10th, 2018
39 days agonnr1 nitrate reductase(NADH)1: leaf, scutellum cDNA's; flavin and cyt b domains functional in E. coli, may be allelic to nnr3
4.05
   Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Variation: October 26th, 2010
39 days agoelfa3 elongation factor alpha3: shares high (89-99%) nucleotide sequence identity with genes elf1a to elf1g, with a 99% sequence identity with elf1a.
6.05
GRMZM2G154218
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Variation: April 7th, 2014
Gene Model: July 27th, 2016
39 days agogln2 glutamine synthetase2: cytosolic, GS1-2 isoform, root specific, gene specific cDNA probe, 6-member nuclear gene family; contary to preceding notes, Rastogi et. al., 1998 Plant Cell Phyol. 39:443-446, observed gln2 trancripts primarily in the pedicels but at undetectable levels in roots (TM).
1.09
   Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Variation: September 1st, 2003
39 days agogln3 glutamine synthetase3: cytosolic GS1-5 isoform, a major species in root; gene specific cDNA probe, 6-member nuclear gene family
9.06
   Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Variation: December 7th, 2012
39 days agogln4 glutamine synthetase4: cytosolic GS1-3 isoform, major species in both root and leaf, gene specific cDNA probes, 6-member nuclear gene family; SSR phi085
5.06
   Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Variation: September 1st, 2003
39 days agogln5 glutamine synthetase5: cytosolic GS1-4 isoform, major species in both leaf and root, gene specific cDNA probe, 6-member nuclear gene family
4.06
   Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Variation: May 30th, 2014
39 days agogln1 glutamine synthetase1: chloroplast, gene specific cDNA probe, GS2 isoform; 6-member nuclear gene family
10.07
   Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Variation: September 1st, 2003
39 days agonrt2 nitrate transport2:
4.11
GRMZM2G010280
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Variation: May 9th, 2018
Gene Model: May 9th, 2018
39 days agofgs1 ferredoxin-dependent glutamate synthase1: deduced amino acid sequence homologous with E. coli NADPH-glutamate synthase, single copy by Southern blot analysis
7.05
   Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Variation: July 24th, 2015
39 days agonii2 nitrite reductase2: cDNA homologous to spinach gene, induced by nitrate, putative chloroplast transit peptide, two copies
4.07
GRMZM2G079381
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 10th, 2014
39 days agoasn1 asparagine synthetase1: cDNA sequence 70% identical to asparagine synthetase from Pisum sativum
1.03
GRMZM2G074589
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Variation: May 9th, 2009
Gene Model: December 30th, 2015
39 days agoamt5 ammonium transporter5:
10.04
GRMZM2G164743
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: July 8th, 2013
Gene Model: December 29th, 2017
39 days agoasn2 asparagine synthetase2:
3.09
GRMZM2G093175
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Variation: December 30th, 2015
Gene Model: December 30th, 2015
39 days agoasn3 asparagine synthetase3:
1.03
GRMZM2G053669
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Variation: May 9th, 2009
Gene Model: October 16th, 2015
39 days agoasn4 asparagine synthetase4:
9.06
GRMZM2G078472
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Variation: January 20th, 2016
Gene Model: December 30th, 2015
39 days agoamt1 ammonium transporter1:
 
GRMZM2G175140
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
39 days agoamt2 ammonium transporter2:
 
GRMZM2G028736
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
39 days agocul1 cullin1:
 
GRMZM2G166089
Hu, SL et al. 2017. Frontiers Plant Sci 8:1039     Reference: July 6th, 2017
Gene Product: May 10th, 2018
Gene Model: July 6th, 2017
39 days agonpf2 nitrate transporter/peptide transporter family2: encodes a a pH dependent non-biphasic high-affinity nitrate-specific transport protein
 
GRMZM2G161459
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531   AT1G12110 (TAIR) Reference: May 10th, 2018
Gene Product: September 1st, 2003
Variation: September 11th, 2017
Gene Model: September 11th, 2017
39 days agonpf3 nitrate transporter/peptide transporter family3:
 
GRMZM2G112154
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Gene Model: May 10th, 2018
39 days agonpf4 nitrate transporter/peptide transporter family4:
 
GRMZM2G161483
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Gene Model: May 10th, 2018
39 days agonpf5 nitrate transporter/peptide transporter family5:
 
GRMZM2G161483
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Gene Model: May 10th, 2018
39 days agoamt4 ammonium transporter4:
 
GRMZM2G062024
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: July 8th, 2013
Gene Model: May 10th, 2018
39 days agonnr5 nitrate reductase5:
 
GRMZM2G428027
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Gene Model: May 10th, 2018
39 days agonnr4 nitrate reductase4:
 
GRMZM2G076723
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Gene Model: May 10th, 2018
39 days agonii1 nitrate reductase1:
 
GRMZM2G102959
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Gene Model: May 10th, 2018
39 days agouce9 ubiquitin conjugating enzyme9:
 
GRMZM2G027378
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Gene Model: May 10th, 2018
39 days agocul2 cullin2:
 
GRMZM2G166694
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: May 10th, 2018
Gene Model: May 10th, 2018
39 days agosin2 sin homolog2: similar to yeast SIN3
 
GRMZM2G334457
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531     Reference: May 10th, 2018
Gene Product: September 1st, 2003
Gene Model: May 10th, 2018
39 days agonpf1 nitrate transporter/peptide transporter family1: encodes a low-affinity nitrate transporter with efflux activity; switches to a high-affinity chloride selective transporter, when supplied chloride.
10.03
GRMZM2G086496
Dechorgnat, J et al. 2018. Frontiers Plant Sci 9:531   AT1G12110 (TAIR) Reference: May 10th, 2018
Gene Product: September 1st, 2003
Variation: September 11th, 2017
Gene Model: September 11th, 2017
40 days agobrl3 bri1-like receptor kinase3: Encodes a brassinosteroid insensitive1-like receptor kinase.
4.05
GRMZM2G438007
Kir, G, et al. 2015. Plant Physiol. 0:DOI: 10.1104/pp.15.00367   AT1G55610 (TAIR)
LOC_Os08g25380 (MSU/TIGR)
Reference: August 28th, 2015
Variation: May 9th, 2018
Gene Model: May 9th, 2018
40 days agoakh1 aspartate kinase-homoserine dehydrogenase1: cDNA 77% homologous to carrot threonine-sensitive AK-HSDH bifunctional enzyme
4.05
GRMZM2G437977
Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: September 1st, 2003
Variation: September 10th, 2010
Gene Model: May 9th, 2018
44 days agoereb53 AP2-EREBP-transcription factor 53: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Lowe, KS et al. 2018. In Vitro Cell Dev Biol-Plant pp.doi: 10.1007/s11627-018-9905-2   LOC_Os1g67410 (MSU/TIGR) Reference: May 5th, 2018
Gene Product: February 27th, 2017
44 days agohb122 Homeobox-transcription factor 122: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Lowe, KS et al. 2018. In Vitro Cell Dev Biol-Plant pp.doi: 10.1007/s11627-018-9905-2     Reference: May 5th, 2018
Gene Product: August 25th, 2017
44 days agoplt1 phospholipid transfer protein homolog1: amino acid sequence, deduced from coleoptile cDNA, homologous to phospholipid transfer proteins
3.06
GRMZM2G101958
Lowe, KS et al. 2018. In Vitro Cell Dev Biol-Plant pp.doi: 10.1007/s11627-018-9905-2     Reference: May 5th, 2018
Gene Product: September 1st, 2003
Variation: March 17th, 2015
Gene Model: March 12th, 2015
45 days agomyb156 MYB-transcription factor 156:
1.04
GRMZM2G147698
Barriere, Y et al. 2017. Maydica 62:22     Reference: May 4th, 2018
Variation: September 29th, 2010
Gene Model: March 4th, 2016
45 days agopal1 phenylalanine ammonia lyase homolog1: leaf cDNA csu156 similar to rice phenylalanine ammonia lyase, single copy
5.05
   Barriere, Y et al. 2017. Maydica 62:22     Reference: May 4th, 2018
Gene Product: September 1st, 2003
Variation: September 24th, 2014
45 days agopal2 phenylalanine ammonia lyase2:
2.04 - 2.04
GRMZM2G441347
Barriere, Y et al. 2017. Maydica 62:22     Reference: May 4th, 2018
Gene Product: September 1st, 2003
Variation: February 21st, 2017
Gene Model: February 21st, 2017
45 days agopal3 phenylalanine ammonia lyase3: used primers on cDNA from glume bars to PCR out RFLP probe. 190 bp ss-mRNA with homology to phenylalanine ammonia lyase. Mapped minor band to this site.
4.05
GRMZM2G160541
Barriere, Y et al. 2017. Maydica 62:22     Reference: May 4th, 2018
Gene Product: September 1st, 2003
Variation: September 25th, 2014
Gene Model: September 19th, 2014
45 days agocl13018_1  :
1.05
GRMZM2G135045
    Variation: September 25th, 2007
Gene Model: May 4th, 2018
45 days agocl44168_1  :
2.02
GRMZM2G008060
    Variation: September 25th, 2007
Gene Model: May 4th, 2018
45 days agobm6 brown midrib6: brown midrib leaves similar to bm1
 
   Barriere, Y et al. 2017. Maydica 62:22     Reference: May 4th, 2018
Variation: March 5th, 2012
45 days agopal7 phenylalanine ammonia lyase7:
 
GRMZM2G170692
Barriere, Y et al. 2017. Maydica 62:22     Reference: May 4th, 2018
Gene Product: September 1st, 2003
Gene Model: May 6th, 2016
45 days agopal9 phenylalanine ammonia lyase9:
 
GRMZM2G029048
Barriere, Y et al. 2017. Maydica 62:22     Reference: May 4th, 2018
Gene Product: September 1st, 2003
Gene Model: May 6th, 2016
45 days agopal5 phenylalanine ammonia lyase5:
 
GRMZM2G081582
Barriere, Y et al. 2017. Maydica 62:22     Reference: May 4th, 2018
Gene Product: September 1st, 2003
Gene Model: May 6th, 2016
45 days agopal4 phenylalanine ammonia lyase4:
 
GRMZM2G063917
Barriere, Y et al. 2017. Maydica 62:22     Reference: May 4th, 2018
Gene Product: September 1st, 2003
Gene Model: May 6th, 2016
45 days agopal8 phenylalanine ammonia lyase8:
 
GRMZM2G334660
Barriere, Y et al. 2017. Maydica 62:22     Reference: May 4th, 2018
Gene Product: September 1st, 2003
Gene Model: May 17th, 2016
45 days agofah1 ferulic acid 5-hydroxylase1: Involved in lignin biosynthesis
 
AC210173.4_FG005
Barriere, Y et al. 2017. Maydica 62:22   AT4G36220 (TAIR)
LOC_Os10g36848 (MSU/TIGR)
Reference: May 4th, 2018
Gene Product: May 4th, 2018
Gene Model: June 23rd, 2016
45 days agofah2 ferulic acid 5-hydroxylase2: Involved in lignin biosynthesis
 
GRMZM2G100158
  AT4G36220 (TAIR)
LOC_Os10g36848 (MSU/TIGR)
Gene Product: May 4th, 2018
Gene Model: May 4th, 2018
46 days agobr2 brachytic2: like br1; mi1 is allelic and preceded (1935), but br2 name is retained due to long usagelike Arabidopsis ABC transporter B family member 1
1.06 - 1.07
GRMZM2G315375
Zhang, ML et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.17.01379     Reference: May 3rd, 2018
Gene Product: May 1st, 2012
Variation: May 3rd, 2018
Gene Model: April 28th, 2012
48 days agoxlg1 extra-large guanine nucleotide-binding protein1: mutant knockout has reduced plant height; triple mutants are lethal at the seedling stage (Wu et al., 2018)
1.05
GRMZM2G127739
Wu, QY et al. 2018. PLoS Genetics pp.doi: 10.1371/journal.pgen.1007374     Reference: May 1st, 2018
Gene Product: May 1st, 2018
Variation: May 1st, 2018
Gene Model: June 13th, 2017
48 days agogbp2 GTP binding protein2: cDNA sequence similar animal G protein beta-subunits; single copy
1.09
GRMZM2G045314
Wu, QY et al. 2018. PLoS Genetics pp.doi: 10.1371/journal.pgen.1007374     Reference: May 1st, 2018
Gene Product: May 1st, 2018
Variation: January 25th, 2011
Gene Model: July 27th, 2016
48 days agoxlg2 extra-large guanine nucleotide-binding protein2: mutant knockout has reduced plant height; triple mutants are lethal at the seedling stage (Wu et al., 2018)
 
GRMZM2G016858
Wu, QY et al. 2018. PLoS Genetics pp.doi: 10.1371/journal.pgen.1007374     Reference: May 1st, 2018
Gene Product: May 1st, 2018
Variation: May 1st, 2018
Gene Model: May 1st, 2018
48 days agogg2 G-protein gamma subunit2: ortholog of AGG2 (Arabidopsis) and RGG1 (rice)
 
   Wu, QY et al. 2018. PLoS Genetics pp.doi: 10.1371/journal.pgen.1007374   AT3G22942 (TAIR)
LOC_Os03g43480 (MSU/TIGR)
Reference: May 1st, 2018
Gene Product: May 1st, 2018
48 days agogg1 G-protein gamma subunit1: ortholog of AGG1 (Arabidopsis) and RGG2 (rice)
 
GRMZM2G015578
  AT3G63420 (TAIR)
LOC_Os02g04520 (MSU/TIGR)
Gene Product: May 1st, 2018
Gene Model: May 1st, 2018
48 days agoxlg3 extra-large guanine nucleotide-binding protein3: mutant knockout has reduced plant height; triple mutants are lethal at the seedling stage (Wu et al., 2018)
6.01
GRMZM2G429113
Wu, QY et al. 2018. PLoS Genetics pp.doi: 10.1371/journal.pgen.1007374     Reference: May 1st, 2018
Gene Product: May 1st, 2018
Variation: May 1st, 2018
Gene Model: May 1st, 2018
51 days agocts1 citrate synthase1: leaf cDNA csu324
5.04
GRMZM2G063851
Eprintsev, AT et al. 2018. Plant Sci 272:157-163     Reference: April 28th, 2018
Gene Product: April 26th, 2018
Variation: June 10th, 2014
Gene Model: June 10th, 2014
51 days agoparp1 poly(ADP-ribose) polymerase1:
8.03
GRMZM2G124718
Muli, JK et al. 2018. Plant 6:8-15     Reference: April 28th, 2018
Gene Product: September 1st, 2003
Variation: August 19th, 2010
Gene Model: August 7th, 2014
51 days agoparp2 poly(ADP-ribose) polymerase2:
2.06
GRMZM5G831712
Muli, JK et al. 2018. Plant 6:8-15     Reference: April 28th, 2018
Gene Product: September 1st, 2003
Variation: August 19th, 2010
Gene Model: July 28th, 2016
51 days agocts2 citrate synthase2: Tandem duplication 27kb downstream of cts3 based on CornCyc
4.09
GRMZM2G064023
Eprintsev, AT et al. 2018. Plant Sci 272:157-163     Reference: April 28th, 2018
Gene Product: April 26th, 2018
Gene Model: April 27th, 2018
51 days agomgt12 magnesium transporter12: encodes CorA/MRS2/MGT-type magnesium transporter
 
GRMZM2G420436
Li, HY et al. 2018. Gene pp.doi: 10.1016/j.gene.2018.04.068     Reference: April 28th, 2018
Gene Product: April 18th, 2016
Gene Model: April 18th, 2016
51 days agocts3 citrate synthase3: Tandem duplication 27kb upstream of cts2 based on CornCyc
 
GRMZM2G063909
Eprintsev, AT et al. 2018. Plant Sci 272:157-163     Reference: April 28th, 2018
Gene Product: April 26th, 2018
Gene Model: April 27th, 2018
52 days agombd120 methyl binding domain120:
6.05
GRMZM2G069254
Springer, N; Kaeppler, SM. 2005. Plant Physiol 138:92-104     Reference: February 3rd, 2010
Gene Product: December 24th, 2015
Variation: April 27th, 2018
Gene Model: July 7th, 2015
52 days agocts4 citrate synthase4:
 
GRMZM2G135588
    Gene Product: April 26th, 2018
Gene Model: April 27th, 2018
54 days agobnlg589  :
4.10
GRMZM2G101920
    Variation: September 1st, 2003
Gene Model: April 25th, 2018
54 days agobnlg1434  :
4.00
GRMZM2G008369
    Variation: September 1st, 2003
Gene Model: April 25th, 2018
54 days agobnl7.65  : Tests with B-A translocations indicate that this probe probably maps to chromosome 4L.
4.08
GRMZM2G138936
Beaumont, VH et al. 1996. Theor Appl Genet 93:606-612     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: April 25th, 2018
55 days agoanl1 anthocyaninless lethal1: Colorless aleurone; small kernels; embryo inviable
5.03
   Coe, EH. 1987. MNL 61:47     Reference: September 1st, 2003
Variation: April 24th, 2018
55 days agobnl10.05  : B-A translocations indicated the map location was probably 4L, not 3L or 10S.
4.08
GRMZM2G032619
Grant, D et al. 1993. MNL 67:55-61     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: April 24th, 2018
56 days agotps17 terpene synthase17:
 
GRMZM2G010356
Liang, J et al. 2018. Plant J pp.doi; 10.1111/tpj.13901     Reference: April 23rd, 2018
Variation: July 17th, 2016
Gene Model: July 17th, 2016
58 days agopki1 protein kinase inhibitor1: endosperm cDNA sequence, contains conserved Zn++ binding motif of yeast protein kinase C inhibitor
1.03
   Wu, LJ et al. 2011. Plant Mol Biol Rep 29:1006-1012     Reference: April 21st, 2018
Gene Product: September 1st, 2003
Variation: October 7th, 2014
58 days agoereb185 AP2-EREBP-transcription factor 185: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Li, SX et al. 2018. Frontiers Plant Sci 9:395     Reference: April 21st, 2018
Gene Product: April 10th, 2013
58 days agopyl8 pyrabactin resistance-like protein8: plays role in plant drought resistance (He et al., 2018)
8.04
GRMZM2G165567
He, ZH et al. 2018. Frontiers Plant Sci 9:422     Reference: April 21st, 2018
Gene Product: April 21st, 2018
Gene Model: April 21st, 2018
58 days agopyl3 pyrabactin resistance-like protein3: plays role in plant drought resistance (He et al., 2018)
 
GRMZM2G154987
He, ZH et al. 2018. Frontiers Plant Sci 9:422     Reference: April 21st, 2018
Gene Product: April 21st, 2018
Gene Model: April 21st, 2018
58 days agopyl9 pyrabactin resistance-like protein9: plays role in plant drought resistance (He et al., 2018)
 
GRMZM2G133631
He, ZH et al. 2018. Frontiers Plant Sci 9:422     Reference: April 21st, 2018
Gene Product: April 21st, 2018
Gene Model: April 21st, 2018
58 days agopyl10 pyrabactin resistance-like protein10: plays role in plant drought resistance (He et al., 2018)
 
GRMZM2G063882
He, ZH et al. 2018. Frontiers Plant Sci 9:422     Reference: April 21st, 2018
Gene Product: April 21st, 2018
Gene Model: April 21st, 2018
58 days agopyl12 pyrabactin resistance-like protein12: plays role in plant drought resistance (He et al., 2018)
 
GRMZM2G405064
He, ZH et al. 2018. Frontiers Plant Sci 9:422     Reference: April 21st, 2018
Gene Product: April 21st, 2018
Gene Model: April 21st, 2018
58 days agodbf2 DRE-binding protein 2: ereb1 locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
9.04
GRMZM5G889719
Li, SX et al. 2018. Frontiers Plant Sci 9:395     Reference: April 21st, 2018
Gene Product: April 10th, 2013
Gene Model: July 27th, 2016
59 days agolox3 lipoxygenase3:
3.06
   Battilani, P et al. 2018. Mol Plant Pathol pp.doi: 10.1111/mpp.12690     Reference: April 20th, 2018
Gene Product: January 3rd, 2018
Variation: November 14th, 2014
59 days agoast91 anti-sigma factor antagonist domain of sulfate transporter91:
2.02
GRMZM2G395114
Huang, Q et al. 2018. J Plant Physiol 220:24-33   AT1G23090 (TAIR)
LOC_Os04g55800 (MSU/TIGR)
Reference: November 14th, 2017
Gene Product: April 20th, 2018
Variation: February 2nd, 2018
Gene Model: February 2nd, 2018
59 days agosfp5 sulfate transporter5:
9.02
GRMZM2G444801
Huang, Q et al. 2018. J Plant Physiol 220:24-33     Reference: November 14th, 2017
Gene Product: April 20th, 2018
Gene Model: March 14th, 2018
59 days agosfp1 sulfate permease1:
1.02
GRMZM2G159632
Huang, Q et al. 2018. J Plant Physiol 220:24-33     Reference: November 14th, 2017
Gene Product: April 20th, 2018
Gene Model: February 3rd, 2015
59 days agolox4 lipoxygenase4:
1.09
GRMZM2G109056
Battilani, P et al. 2018. Mol Plant Pathol pp.doi: 10.1111/mpp.12690     Reference: April 20th, 2018
Gene Product: January 3rd, 2018
Variation: April 20th, 2018
Gene Model: June 10th, 2014
59 days agolox5 lipoxygenase5:
5.02
GRMZM2G102760
Battilani, P et al. 2018. Mol Plant Pathol pp.doi: 10.1111/mpp.12690     Reference: April 20th, 2018
Gene Product: January 3rd, 2018
Variation: April 20th, 2018
Gene Model: June 10th, 2014
59 days agolox12 lipoxygenase12: single copy, required for resistance to Fusarium stalk and ear rot
3.04
GRMZM2G106748
Battilani, P et al. 2018. Mol Plant Pathol pp.doi: 10.1111/mpp.12690     Reference: April 20th, 2018
Gene Product: January 3rd, 2018
Variation: August 15th, 2014
Gene Model: June 10th, 2014
59 days agosfp2 sulfate transporter2:
 
GRMZM2G080178
Huang, Q et al. 2018. J Plant Physiol 220:24-33     Reference: November 14th, 2017
Gene Product: April 20th, 2018
Gene Model: November 13th, 2017
59 days agosfp4 sulfate transporter4:
 
GRMZM2G154211
Huang, Q et al. 2018. J Plant Physiol 220:24-33     Reference: November 14th, 2017
Gene Product: April 20th, 2018
Gene Model: November 13th, 2017
59 days agosfp6 sulfate transporter6:
 
GRMZM2G158013
Huang, Q et al. 2018. J Plant Physiol 220:24-33     Reference: November 14th, 2017
Gene Product: April 20th, 2018
Gene Model: November 13th, 2017
59 days agosfp7 sulfate transporter7:
 
GRMZM2G068212
Huang, Q et al. 2018. J Plant Physiol 220:24-33     Reference: November 14th, 2017
Gene Product: April 20th, 2018
Gene Model: November 13th, 2017
59 days agosfp3 sulfate transporter3:
1.02
GRMZM2G042171
Huang, Q et al. 2018. J Plant Physiol 220:24-33     Reference: November 14th, 2017
Gene Product: April 20th, 2018
Gene Model: November 13th, 2017
60 days agoo*-QCL3024 opaque*-QCL3024: mutant has opaque/high-lysine endosperm
 
   Sarika, K et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.04.014     Reference: April 19th, 2018
Variation: February 16th, 2013
60 days agomurE1 mureinE1: orthologous to At1g63680Maize ortholog of Arabidopsis MurE. Associates with Plastid Encoded RNA polymerase (PEP). Required for PEP-mediated transcription. (A. Barkan, 2015)
 
GRMZM2G009070
Pfalz, J et al. 2015. New Phytol 206:1024-1037   At1g63680 (TAIR) Reference: December 4th, 2015
Gene Product: April 19th, 2018
Variation: January 22nd, 2015
Gene Model: January 21st, 2015
60 days agonap1 nucleosome assembly protein1:
 
GRMZM2G157019
    Variation: April 19th, 2018
Gene Model: April 19th, 2018
61 days agopdk1 pyruvate, orthophosphate dikinase1: cDNA, genomic and peptide sequences; microsatellite mapped (SSRs phi025, phi078, phi081; nc012 ); cytosolic or plastidic, dependent on transcript processingmutant seedlings are pale green and lethal once kernel reserves are exhaused, even when plants were grown under 2% CO2
6.05
GRMZM2G306345
Zhang, YL et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12656     Reference: April 18th, 2018
Gene Product: July 28th, 2014
Variation: April 18th, 2018
Gene Model: November 21st, 2012
62 days agoumc1117  : Alba DNA/RNA-binding protein
4.04
GRMZM2G050982
    Variation: September 1st, 2003
Gene Model: April 17th, 2018
62 days agoumc1142  :
4.05
GRMZM2G030125
    Variation: September 1st, 2003
Gene Model: April 17th, 2018
62 days agoumc1964  :
4.05
GRMZM2G075496
    Variation: September 1st, 2003
Gene Model: April 17th, 2018
62 days agocsu221  :
4.00
GRMZM2G131409
Baysdorfer, C. 1994. cDNA sequence submission to dbEST     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: April 17th, 2018
62 days agocsu235  : similar to Arabidopsis chaperone DnaJ-domain containing protein
4.03
GRMZM2G124644
Baysdorfer, C. 1994. cDNA sequence submission to dbEST     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: April 17th, 2018
62 days agoAY110355  :
4.06
GRMZM2G074436
    Variation: July 29th, 2004
Gene Model: April 17th, 2018
62 days agoAY110631  :
4.08
GRMZM2G439311
    Variation: July 29th, 2004
Gene Model: April 17th, 2018
65 days agosnrkII4 SnRK2 serine threonine protein kinase 4:
3.06
GRMZM2G110922
Huai, JL. 2008. Plant Cell Rep. 27:1861-8     Reference: February 11th, 2015
Gene Product: April 14th, 2018
Gene Model: February 11th, 2015
65 days agosnrkII6 SnRK2 serine threonine protein kinase6:
4.05
GRMZM2G130018
Huai, JL. 2008. Plant Cell Rep. 27:1861-8     Reference: February 11th, 2015
Gene Product: April 14th, 2018
Variation: November 12th, 2014
Gene Model: November 12th, 2014
65 days agosnrkII8 SnRK2 serine threonine protein kinase8: salt tolerance expressed in Arabidopsis host (Vilela 2013)
 
GRMZM2G138861
Vilela, B et al. 2013. PLoS One 8:e58105     Reference: February 11th, 2015
Gene Product: April 14th, 2018
Gene Model: February 11th, 2015
65 days agosnrkII1 SnRK2 serine threonine protein kinase1:
 
GRMZM2G035809
Huai, JL. 2008. Plant Cell Rep. 27:1861-8     Reference: February 11th, 2015
Gene Product: April 14th, 2018
Gene Model: February 11th, 2015
65 days agosnrkII10 SnRK2 serine threonine kinase10:
 
GRMZM2G066867
Huai, JL. 2008. Plant Cell Rep. 27:1861-8     Reference: February 11th, 2015
Gene Product: April 14th, 2018
Gene Model: February 11th, 2015
65 days agosnrkII9 SnRK2 serine threonine protein kinase9:
 
GRMZM2G081915
Huai, JL. 2008. Plant Cell Rep. 27:1861-8     Reference: February 11th, 2015
Gene Product: April 14th, 2018
Gene Model: April 14th, 2018
65 days agosnrkII11 SnRK2 serine threonine protein kinase 11:
6.05
GRMZM2G063961
Huai, JL. 2008. Plant Cell Rep. 27:1861-8     Reference: February 11th, 2015
Gene Product: April 14th, 2018
Gene Model: February 11th, 2015
65 days agosnrkII2 SnRK2 serine threonine protein kinase2: induced by cold, salt and ABA
7.04
GRMZM2G056732
Huai, JL. 2008. Plant Cell Rep. 27:1861-8     Reference: February 11th, 2015
Gene Product: April 14th, 2018
Gene Model: February 11th, 2015
65 days agosnrkII5 SnRK2 serine threonine kinase5:
10.07
GRMZM2G110908
Huai, JL. 2008. Plant Cell Rep. 27:1861-8     Reference: February 11th, 2015
Gene Product: April 14th, 2018
Gene Model: February 11th, 2015
65 days agosnrkII7 SnRK2 serine threonine protein kinase7:
2.04
GRMZM2G155593
Huai, JL. 2008. Plant Cell Rep. 27:1861-8     Reference: February 11th, 2015
Gene Product: April 14th, 2018
Gene Model: February 11th, 2015
65 days agosnrkII3 SnRK2 serine threonine protein kinase3:
1.05
GRMZM2G180916
Huai, JL. 2008. Plant Cell Rep. 27:1861-8     Reference: February 11th, 2015
Gene Product: April 14th, 2018
Gene Model: February 11th, 2015
66 days agoAY110170  :
4.09
GRMZM2G155253
    Variation: July 29th, 2004
Gene Model: April 13th, 2018
66 days agoAY110290  : similar to Arabidopsis putative S-acyltransferase
4.05
GRMZM5G821611
    Variation: July 29th, 2004
Gene Model: April 13th, 2018
66 days agoAY110310  : similar to Arabidopsis P-glycoprotein 2
4.06
GRMZM2G004748
    Variation: July 29th, 2004
Gene Model: April 13th, 2018
67 days agoAY109715  :
4.00
GRMZM2G145725
    Variation: July 29th, 2004
Gene Model: April 12th, 2018
67 days agoAY109980  :
4.08
GRMZM2G363038
    Variation: July 29th, 2004
Gene Model: April 12th, 2018
67 days agoAY109933  :
4.09
GRMZM2G078832
    Variation: September 25th, 2007
Gene Model: April 12th, 2018
71 days agoki1 Kindr-RNAi1: preferential segregation of knobs and loci linked to knobs associated with Abnormal chromosome 10 (Ab10)
 
   Dawe, RK et al. 2018. Cell 173:doi: 10.1016/j.cell.2018.03.009     Reference: April 7th, 2018
Variation: April 8th, 2018
72 days agosmd1 suppressor of meiotic drive1: preferential segregation of knobs and loci linked to knobs associated with Abnormal chromosome 10 (Ab10)
10.06
   Dawe, RK et al. 2018. Cell 173:doi: 10.1016/j.cell.2018.03.009     Reference: April 7th, 2018
Variation: April 7th, 2018
72 days agosmd12 suppressor of meiotic drive12: preferential segregation of knobs and loci linked to knobs associated with Abnormal chromosome 10 (Ab10)
 
   Dawe, RK et al. 2018. Cell 173:doi: 10.1016/j.cell.2018.03.009     Reference: April 7th, 2018
Variation: April 7th, 2018
73 days agomet1 DNA methyl transferase1: cDNA clones
7.01
GRMZM2G333916
Candaele, J et al. 2014. Plant Physiol 164:1350-1364     Reference: December 25th, 2014
Gene Product: April 6th, 2018
Variation: December 25th, 2014
Gene Model: December 24th, 2014
73 days agome2 NADP-dependent malic enzyme2: cDNA in roots, preprotein contains chloroplast transit peptide sequences and is imported and processed; C3-like enzyme
6.05
GRMZM2G122479
Borba, AR et al. 2018. Mol Biol Evol pp.doi: 10.1093/molbev/msy060/4962173     Reference: April 6th, 2018
Gene Product: August 21st, 2014
Variation: August 24th, 2014
Gene Model: August 21st, 2014
73 days agomet3 DNA methyl transferase3:
9.07
   Candaele, J et al. 2014. Plant Physiol 164:1350-1364     Reference: December 25th, 2014
Gene Product: April 6th, 2018
Variation: February 13th, 2016
73 days agomet7 DNA methyl transferase7:
1.01
   Candaele, J et al. 2014. Plant Physiol 164:1350-1364     Reference: December 25th, 2014
Gene Product: April 6th, 2018
Variation: December 22nd, 2014
73 days agomet8 DNA methyl transferase8:
 
GRMZM2G334041
Candaele, J et al. 2014. Plant Physiol 164:1350-1364     Reference: December 25th, 2014
Gene Product: April 6th, 2018
Variation: December 25th, 2014
Gene Model: December 24th, 2014
73 days agomet4 DNA methyl transferase4:
8.05
GRMZM2G157589
Candaele, J et al. 2014. Plant Physiol 164:1350-1364     Reference: December 25th, 2014
Gene Product: April 6th, 2018
Variation: February 10th, 2010
Gene Model: December 22nd, 2014
73 days agomet6 DNA methyl transferase6:
8.05
GRMZM2G065599
Candaele, J et al. 2014. Plant Physiol 164:1350-1364     Reference: December 25th, 2014
Gene Product: April 6th, 2018
Variation: November 20th, 2012
Gene Model: December 23rd, 2014
73 days agodmt104 DNA methyl transferase 104:
 
       Gene Product: April 6th, 2018
74 days agobhlh104  : Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.04
GRMZM2G088443
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: April 5th, 2018
Gene Model: March 31st, 2018
74 days agohda108 histone deacetylase: mutant plants exhibit many developmental defects: significant reduction in plant height, alterations of shoot and leaf development, alterations of inflorescence patterning and fertility
4.05
   Forestan, C et al. 2018. Genetics 208:1443-1466     Reference: April 5th, 2018
Gene Product: September 1st, 2003
Variation: February 1st, 2018
74 days agodmc1 disrupted meiotic cDNA homolog1:
 
GRMZM2G109618
Feng, C et al. 2018. Plant Biotechnol J pp.doi: 10.1111/pbi.12920     Reference: April 5th, 2018
Variation: May 12th, 2017
Gene Model: January 27th, 2017
75 days agoafd1 absence of first division1: male and female sterility; early meiosis
6.07
GRMZM2G059037
Curtis, CA and Doyle, GG. 1992. J Hered 83:335-341   AT5G05490 (TAIR)
LOC_Os05g50410 (MSU/TIGR)
LOC_Os05g50410 (Gramene)
Reference: April 4th, 2018
Gene Product: July 30th, 2009
Variation: August 11th, 2011
Gene Model: July 14th, 2011
75 days agoam1 ameiotic1: male and female sterility - anaphase I equatorial; alleles am1-pra1(was pra1), am1-2 (was am2)affects switch to meiotic cell cycle
5.02
   Curtis, CA and Doyle, GG. 1992. J Hered 83:335-341     Reference: April 4th, 2018
Variation: August 11th, 2011
75 days agody1 desynaptic1: partial to complete male and female sterility; chromosomes separate after synapsis
 
   Curtis, CA and Doyle, GG. 1992. J Hered 83:335-341     Reference: April 4th, 2018
Variation: June 21st, 2012
75 days agopam1 plural abnormalities of meiosis1: desynchronized meiotic divisions and premeiotic mitosis; male sterile, incompletely female sterile
1.05
   Curtis, CA and Doyle, GG. 1992. J Hered 83:335-341     Reference: April 4th, 2018
Variation: September 1st, 2003
75 days agopam2 plural abnormalities of meiosis2: like pam1
 
   Curtis, CA and Doyle, GG. 1992. J Hered 83:335-341     Reference: April 4th, 2018
Variation: September 1st, 2003
75 days agopo1 polymitotic1: (aka ms4, ms6) repeats 2nd meiotic division in male and female
6.01 - 6.01
   Curtis, CA and Doyle, GG. 1992. J Hered 83:335-341     Reference: April 4th, 2018
Variation: May 20th, 2006
75 days agova1 variable sterile1: variable male and female fertility; cytokinesis fails in anaphase I
7.03
   Curtis, CA and Doyle, GG. 1992. J Hered 83:335-341     Reference: April 4th, 2018
Variation: September 1st, 2003
75 days agoumc60  :
3.06
GRMZM2G094771
Ragot, M; Sisco, PH; Hoisington, DA; Stuber, CW. 1995. Crop Sci 35:1306-1315     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: April 4th, 2018
76 days agoumc3b  : NPI linkage catalog of 1/25/91 calls this locus umc3 in one place and umc3b in another.
3.07
GRMZM2G454081
Beavis, WD et al. 1991. Theor Appl Genet 83:141-145     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: April 3rd, 2018
76 days agoumc2118  :
3.00 - 3.01
GRMZM5G884242
    Variation: April 3rd, 2018
Gene Model: April 3rd, 2018
76 days agoumc2270  :
3.06
GRMZM2G047384
    Variation: February 24th, 2007
Gene Model: April 3rd, 2018
76 days agocbl10 calcineurin B-like10:
3.09
GRMZM2G116584
Zhang, F et al. 2016. Plant Sci 253:118-129     Reference: December 27th, 2016
Gene Product: October 19th, 2016
Gene Model: April 3rd, 2018
77 days agoumc1273  :
3.08
GRMZM2G047298
    Variation: September 1st, 2003
Gene Model: April 2nd, 2018
77 days agoumc1311  :
3.06
GRMZM2G105184
    Variation: September 1st, 2003
Gene Model: April 2nd, 2018
77 days agoumc1320  :
3.08
GRMZM5G824843
    Variation: September 1st, 2003
Gene Model: April 2nd, 2018
77 days agoumc1392  :
3.04
GRMZM2G395983
    Variation: September 1st, 2003
Gene Model: April 2nd, 2018
77 days agoumc1394  :
3.01
GRMZM5G848602
    Variation: September 1st, 2003
Gene Model: April 2nd, 2018
77 days agoumc1399  :
3.07
GRMZM2G055898
    Variation: September 1st, 2003
Gene Model: April 2nd, 2018
77 days agoumc1404  :
3.07
GRMZM2G069061
    Variation: September 1st, 2003
Gene Model: April 2nd, 2018
77 days agoumc1449  :
3.04
GRMZM2G061655
    Variation: February 24th, 2007
Gene Model: April 2nd, 2018
77 days agoumc1458  : similar to Arabidopsis kinase-like protein
3.02
GRMZM2G055089
    Variation: September 1st, 2003
Gene Model: April 2nd, 2018
77 days agoumc1489  :
3.07
GRMZM2G077307
    Variation: September 1st, 2003
Gene Model: April 2nd, 2018
77 days agoumc1495  :
3.04
GRMZM2G161154
    Variation: September 1st, 2003
Gene Model: April 2nd, 2018
77 days agoumc1504  :
3.04
GRMZM2G034855
    Variation: September 1st, 2003
Gene Model: April 2nd, 2018
77 days agoiaa11 Aux/IAA-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.04
GRMZM2G167794
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: April 2nd, 2018
77 days agoumc1608  :
3.04
GRMZM5G871336
    Variation: September 1st, 2003
Gene Model: April 2nd, 2018
77 days agoumc1717a  :
3.04
GRMZM2G076029
    Variation: September 1st, 2003
Gene Model: April 2nd, 2018
77 days agoumc1742  :
3.04
GRMZM2G114552
    Variation: September 1st, 2003
Gene Model: April 2nd, 2018
77 days agoumc1767  :
3.07
AC210193.4_FG002
    Variation: September 1st, 2003
Gene Model: April 2nd, 2018
77 days agoumc1773  :
3.04
GRMZM2G390374
    Variation: September 1st, 2003
Gene Model: April 2nd, 2018
77 days agoumc1780  : similar to Arabidopsis ENTH/VHS/GAT family protein
3.00
GRMZM2G153138
    Variation: September 1st, 2003
Gene Model: April 2nd, 2018
77 days agoumc1813  :
3.09
GRMZM2G117685
    Variation: September 1st, 2003
Gene Model: April 2nd, 2018
79 days agolac3 laccase3:
 
GRMZM2G169033
Sun, Q et al. 2018. Molecular Plant pp.doi: 10.1016/j.molp.2018.03.013     Reference: March 31st, 2018
Gene Product: March 31st, 2018
Gene Model: March 31st, 2018
79 days agolac5 laccase5:
 
GRMZM2G367668
Sun, Q et al. 2018. Molecular Plant pp.doi: 10.1016/j.molp.2018.03.013     Reference: March 31st, 2018
Gene Product: March 31st, 2018
Gene Model: March 31st, 2018
79 days agolac2 laccase2:
 
GRMZM2G146152
Caparros-Ruiz, D et al. 2006. Plant Sci 171:217-225     Reference: March 31st, 2018
Gene Product: March 31st, 2018
Gene Model: March 31st, 2018
79 days agolac4 laccase4:
 
GRMZM2G072780
Caparros-Ruiz, D et al. 2006. Plant Sci 171:217-225     Reference: March 31st, 2018
Gene Product: March 31st, 2018
Gene Model: March 31st, 2018
79 days agolac6 laccase6:
 
GRMZM2G164467
    Gene Product: March 31st, 2018
Gene Model: March 31st, 2018
79 days agolac1 laccase1:
 
GRMZM5G842071
Caparros-Ruiz, D et al. 2006. Plant Sci 171:217-225     Reference: March 31st, 2018
Gene Product: March 31st, 2018
Gene Model: March 31st, 2018
80 days agouaz288a(ppi)  :
3.05
GRMZM2G063949
Helentjaris, T. 1994. Nucleotide sequence submission to dbEST/GenBank     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Gene Model: March 30th, 2018
80 days agoumc1135  :
3.07
GRMZM2G105863
    Variation: September 1st, 2003
Gene Model: March 30th, 2018
80 days agoumc1174  :
3.05
AC210168.4_FG003
    Variation: September 1st, 2003
Gene Model: March 30th, 2018
81 days agobx4 benzoxazinone synthesis4: endoplasmic reticulum P450 monoxygenase; synthesis of cyclic hydroxamates/DIMBOA; insect resistance in young seedlings; NAM SNP PHM1184
4.01
GRMZM2G172491
Zhou, S et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy064     Reference: March 29th, 2018
Gene Product: October 24th, 2011
Variation: October 27th, 2011
Gene Model: October 24th, 2011
81 days agobx14 benzoxazinone synthesis14: encodes an O-methyltransferase that converts DIM2BOA-Glc to HDM2BOA-Glc.
2.05
GRMZM2G127418
Zhou, S et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy064     Reference: March 29th, 2018
Gene Product: July 8th, 2013
Variation: June 20th, 2016
Gene Model: June 20th, 2016
81 days agobx1 benzoxazinless1: plastid localized, committed step in cyclic hydroxamates/DIMBOA synthesis; insect resistance in young seedlings; SSR umc1022
4.00
GRMZM2G085381
Zhou, S et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy064     Reference: March 29th, 2018
Gene Product: October 14th, 2011
Variation: October 24th, 2011
Gene Model: October 14th, 2011
81 days agogl6 glossy6: like gl1, but seedling leaf surface bright green instead of bluish
3.05 - 3.05
   Beckett, JB. 1975. MNL 49:130-134     Reference: September 1st, 2003
Variation: March 29th, 2018
81 days agoorp1 orange pericarp1: duplicate factor with orp2; pericarp orange over orp1 orp2 kernels, manifesting metaxenia; lethal, tryptophan auxotroph
4.05
   Zhou, S et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy064     Reference: March 29th, 2018
Gene Product: September 1st, 2003
Variation: May 19th, 2006
81 days agoorp2 orange pericarp2: duplicate factor with orp2; pericarp orange over orp1 orp2 kernels, manifesting metaxenia; lethal, tryptophan auxotroph
10.03
   Zhou, S et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy064     Reference: March 29th, 2018
Gene Product: September 1st, 2003
Variation: September 1st, 2003
81 days agobx7 benzoxazinone synthesis7: cytosolic O-methyl transferase; synthesis of cyclohydroxamates/DIMBOA; insect resistance in young seedlings; SSR umc2039, INDEL IDP478.
4.03
GRMZM2G441753
Zhou, S et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy064     Reference: March 29th, 2018
Gene Product: October 31st, 2011
Variation: October 26th, 2011
Gene Model: October 19th, 2011
81 days agobx3 benzoxazinone synthesis3: endoplasmic reticulum monoxygenase; synthesis of cyclic hydroxamates/DIMBOA; insect resistance in young seedlings; SSR umc1017
4.01
GRMZM2G167549
Zhou, S et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy064     Reference: March 29th, 2018
Gene Product: October 19th, 2011
Variation: November 12th, 2013
Gene Model: October 24th, 2011
81 days agobx5 benzoxazinone synthesis5: endoplasmic reticulum monoxygenase; synthesis of cyclic hydroxamates/DIMBOA; insect resistance in young seedlings; SSR umc1276.
4.01
GRMZM2G063756
Zhou, S et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy064     Reference: March 29th, 2018
Gene Product: October 24th, 2011
Variation: October 27th, 2011
Gene Model: October 24th, 2011
81 days agobx2 benzoxazinone synthesis2: endoplasmic reticulum P450 monoxygenase; synthesis cyclic hyroxamates/DIMBOA; insect resistance in young seedlings; SSR umc1164, umc1682
4.01
GRMZM2G085661
Zhou, S et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy064     Reference: March 29th, 2018
Gene Product: April 8th, 2013
Variation: October 27th, 2011
Gene Model: October 24th, 2011
81 days agobx8 benzoxazinone synthesis8: cytosolic glucosyltransferase; synthesis of cyclic hydroxamates/DIMBOA; insect resistance in young seedlings
4.01
GRMZM2G085054
Zhou, S et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy064     Reference: March 29th, 2018
Gene Product: October 20th, 2011
Variation: October 31st, 2011
Gene Model: October 20th, 2011
81 days agobx9 benzoxazinone synthesis9: cytosolic glucosyl transferase; redundant with bx8; synthesis of cyclic hydroxamates/DIMBOA; insect resistance in young seedlings
1.06
GRMZM2G161335
Zhou, S et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy064     Reference: March 29th, 2018
Gene Product: October 20th, 2011
Variation: October 27th, 2011
Gene Model: October 20th, 2011
81 days agotsa1 tryptophan synthase alpha subunit1: With products of orp1 and orp2 genes, forms tryptophan synthase. Plastidic.
 
GRMZM5G841619
Zhou, S et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy064     Reference: March 29th, 2018
Gene Product: October 21st, 2011
Gene Model: October 14th, 2011
81 days agobx10 benzoxazinone synthesis10:
 
GRMZM2G311036
Zhou, S et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy064     Reference: March 29th, 2018
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
81 days agobx11 benzoxazinone synthesis11:
 
GRMZM2G336824
Zhou, S et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy064     Reference: March 29th, 2018
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
81 days agobx12 benzoxazinone synthesis12:
 
GRMZM2G023325
Zhou, S et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy064     Reference: March 29th, 2018
Gene Product: July 8th, 2013
Variation: July 8th, 2013
Gene Model: July 8th, 2013
81 days agobx13 benzoxazinone synthesis13: encodes a 2-oxoglutarate-dependent dioxygenase that catalyzes the conversion of DIMBOA-Glc into a new benzoxazinoid intermediate (TRIMBOA-Glc) by an uncommon reaction involving a hydroxylation and a likely ortho-rearrangement of a methoxy group.
 
AC148152.3_FG005
Zhou, S et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy064     Reference: March 29th, 2018
Gene Product: June 20th, 2016
Variation: June 20th, 2016
Gene Model: June 20th, 2016
81 days agoigps1 indole-3-glycerolphosphate synthase1:
 
GRMZM2G106950
Zhou, S et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy064     Reference: March 29th, 2018
Gene Product: March 29th, 2018
Gene Model: March 29th, 2018
81 days agoigps2 indole-3-glycerolphosphate synthase2:
 
   Zhou, S et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy064     Reference: March 29th, 2018
Gene Product: March 29th, 2018
81 days agoigps3 indole-3-glycerolphosphate synthase3:
 
GRMZM2G145870
Zhou, S et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy064     Reference: March 29th, 2018
Gene Product: March 29th, 2018
Gene Model: March 29th, 2018
81 days agoigl1 indole-3-glycerol phosphate lyase1: mRNA production induced by volicitin, forms free indole
1.11
GRMZM2G046191
Zhou, S et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy064     Reference: March 29th, 2018
Gene Product: October 14th, 2011
Variation: July 18th, 2014
Gene Model: July 11th, 2014
81 days agobx6 benzoxazinone synthesis6: cytosolic 2-oxoglutarate-dependent dioxygenase; synthesis of cyclohydroxamates/DIMBOA; insect resistance in young seedlings; SSR umc1232
4.01
   Zhou, S et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy064     Reference: March 29th, 2018
Gene Product: June 20th, 2016
Variation: November 18th, 2011
82 days agorcc1 regulator of chromosome condensation1: similar to Arabidopsis Regulator of chromosome condensation (RCC1) family protein
3.06
GRMZM2G302245
Zheng, HY et al. 2016. Plant Cell Physiol pp.doi: 10.1093/pcp/pcw195     Reference: November 18th, 2016
Variation: March 28th, 2018
Gene Model: March 28th, 2018
82 days agophi453121a  : similar to Arabidopsis E3 ubiquitin-protein ligase SINAT3
3.00
       Variation: March 28th, 2018
83 days agotls1 tasselless1: encodes an aquaporin; plants generally lack tassels, have ear shoots but ear development is variable ranging from no seed set to a few kernels on a small ball-shaped cob; in some backgrounds, pubescent, leathery at 4-8 leaf stage; similar to bs1 of Woodworth and Micu. Phenotypes corrected by boron spraying (Leonard et al 2014).
1.11 - 1.12
GRMZM2G176209
Matthes, MS et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12717     Reference: March 27th, 2018
Gene Product: April 3rd, 2014
Variation: July 29th, 2014
Gene Model: April 2nd, 2014
83 days agoks3 kaurene synthase3: functionality inferred from expression data and sequence similarity (Song et al 2011; Nelissen et al 2012)
2.02
GRMZM2G093603
Lu, XD et al. 2018. Molecular Plant pp.doi: 10.1016/j.molp.2017.11.013     Reference: March 27th, 2018
Gene Product: August 16th, 2012
Gene Model: August 15th, 2012
85 days agomc1 mucronate1: dominant Mc1 kernels have opaque endospermendosperm-specific protein cDNA
2.06
GRMZM2G518638
Li, XX et al. 2018. Plant J pp.doi: 10.1111/tpj.13907     Reference: March 25th, 2018
Gene Product: September 17th, 2010
Variation: September 16th, 2010
Gene Model: July 8th, 2013
85 days agodzs10 delta zein structural10: [was Zps10/(22)]; high (22.5%) methionine 10kDa delta zein; RFLP (probe 10kZ-1)
9.03 - 9.03
   Li, XX et al. 2018. Plant J pp.doi: 10.1111/tpj.13907     Reference: March 25th, 2018
Gene Product: September 1st, 2003
Variation: November 21st, 2012
85 days agozp15 zein protein, 15kDa15: high methionine; genomic blot indicates one or two copies
6.01 - 6.02
GRMZM2G086294
Li, XX et al. 2018. Plant J pp.doi: 10.1111/tpj.13907     Reference: March 25th, 2018
Gene Product: July 8th, 2013
Variation: August 27th, 2013
Gene Model: July 8th, 2013
85 days agozp27 27-kDa zein protein: proline rich; least abundant of zeins in endosperm, not clear if all in zp27 cluster
7.02
   Li, XX et al. 2018. Plant J pp.doi: 10.1111/tpj.13907     Reference: March 25th, 2018
Gene Product: September 17th, 2010
Variation: September 16th, 2010
85 days agodzs18 delta zein structural18: high (26%) methionine 18 kDa delta zein, similar to dzs10
6.04
   Li, XX et al. 2018. Plant J pp.doi: 10.1111/tpj.13907     Reference: March 25th, 2018
Gene Product: September 1st, 2003
Variation: February 16th, 2014
85 days agogz50 50kD gamma zein: endosperm-specific protein cDNA
7.02
GRMZM2G138689
Li, XX et al. 2018. Plant J pp.doi: 10.1111/tpj.13907     Reference: March 25th, 2018
Gene Product: September 22nd, 2010
Variation: September 16th, 2010
Gene Model: November 21st, 2014
87 days agocsu845  :
3.09
GRMZM2G364528
    Variation: September 1st, 2003
Gene Model: March 23rd, 2018
87 days agocsu636  :
3.05
GRMZM2G359505
    Variation: September 1st, 2003
Gene Model: March 23rd, 2018
87 days agoga1 gametophyte factor1: (was ga9) Ga1 pollen grains are competitively superior to ga1 on Ga1 silks; Ga1-S (strong) super-gametophyte
4.02 - 4.03
   Jones, ZG; Goodman, MM. 2018. Crop Sci 58:doi: 10.2135/cropsci2017.09.0560     Reference: March 23rd, 2018
Variation: June 22nd, 2005
87 days agommc0022  :
3.05
GRMZM5G832175
    Variation: September 1st, 2003
Gene Model: March 23rd, 2018
87 days agommc0132  :
3.04
GRMZM2G134178
    Variation: September 1st, 2003
Gene Model: March 23rd, 2018
87 days agommc0312a  : similar to Arabidopsis P-loop containing nucleoside triphosphate hydrolase-like protein
3.04
GRMZM2G018951
    Variation: September 1st, 2003
Gene Model: March 23rd, 2018
87 days agotcb1 teosinte crossing barrier1: Barrier to crossing of maize onto Central Plateau teosinte - transferred to maize with linked positive modifiers, fails to accept any pollen, including Ga1-s
4.04
   Jones, ZG; Goodman, MM. 2018. Crop Sci 58:doi: 10.2135/cropsci2017.09.0560     Reference: March 23rd, 2018
Variation: May 19th, 2006
87 days agohac101a  :
3.04
GRMZM2G069886
    Gene Product: November 6th, 2003
Variation: September 1st, 2003
Gene Model: March 23rd, 2018
87 days agoatx4 arabidopsis trithorax homolog4:
3.01
GRMZM2G085176
Chen, LQ et al. 2017. Plant Physiol 174:1795-1806   AT4G27910 (TAIR)
LOC_Os01g11952 (MSU/TIGR)
Reference: June 29th, 2017
Gene Product: June 30th, 2017
Gene Model: March 23rd, 2018
87 days agorafs1 raffinose synthase1: mutants have significantly reduced seed vigor
3.03
GRMZM2G150906
Li, T et al. 2017. Molecular Plant 10:1540-1555     Reference: March 1st, 2018
Variation: March 23rd, 2018
Gene Model: March 23rd, 2018
88 days agobnlg197  :
3.06
GRMZM5G851026
    Variation: September 1st, 2003
Gene Model: March 22nd, 2018
88 days agobnlg1601  : similar to Arabidopsis Sterile alpha motif (SAM) domain-containing protein
3.05
GRMZM2G081935
    Variation: September 1st, 2003
Gene Model: March 22nd, 2018
88 days agobnlg1638  :
3.04
GRMZM2G104829
    Variation: September 1st, 2003
Gene Model: March 22nd, 2018
88 days agowrky27 WRKY-transcription factor 27: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.02
GRMZM2G475984
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: March 22nd, 2018
88 days agobnlg1754  :
3.09
GRMZM2G087769
    Variation: September 1st, 2003
Gene Model: March 22nd, 2018
89 days agozhd21 ZF-HD-transcription factor 21: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.05
GRMZM5G821755
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: March 21st, 2018
Gene Model: March 21st, 2018
89 days agobnlg1160  :
3.06
GRMZM2G071705
    Variation: September 1st, 2003
Gene Model: March 21st, 2018
89 days agobnlg1452  :
3.04
GRMZM2G410916
    Variation: September 1st, 2003
Gene Model: March 21st, 2018
90 days agoAY109870  :
3.04
GRMZM2G111014
    Variation: July 29th, 2004
Gene Model: March 20th, 2018
90 days agoAY109934  : similar to Arabidopsis and Sorghum protein trichome birefringence-like 19
3.08
GRMZM2G004183
    Variation: July 29th, 2004
Gene Model: March 20th, 2018
90 days agoAY110055  :
3.06
GRMZM2G014452
    Variation: July 29th, 2004
Gene Model: March 20th, 2018
90 days agoAY110151  :
3.04
GRMZM2G017835
    Variation: July 29th, 2004
Gene Model: March 20th, 2018
90 days agoAY110352  :
3.05
GRMZM2G163514
    Variation: July 29th, 2004
Gene Model: March 20th, 2018
90 days agoAY110540  :
3.08
GRMZM2G130358
    Variation: July 29th, 2004
Gene Model: March 20th, 2018
90 days agoAY112215  :
3.05
GRMZM2G138258
    Variation: July 29th, 2004
Gene Model: March 20th, 2018
90 days agoBE639846  :
3.06
GRMZM2G127180
    Variation: July 29th, 2004
Gene Model: March 20th, 2018
3 months agoms33 male sterile33:
2.09
GRMZM2G070304
Xie, K et al. 2018. Theor Appl Genet pp.doi: 10.1007/s00122-018-3083-9   LOC_Os11g45400 (MSU/TIGR) Reference: March 17th, 2018
Gene Product: March 17th, 2018
Variation: March 17th, 2018
Gene Model: March 17th, 2018
3 months agobt1 brittle endosperm1: mature kernel collapsed, angular, often translucent and brittle (alleles sh3, sh5)
5.04
   Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Gene Product: February 24th, 2015
Variation: March 16th, 2018
3 months agoAI770795  :
3.06
GRMZM2G052365
    Variation: July 29th, 2004
Gene Model: March 16th, 2018
3 months agoo11 opaque endosperm11: thin, opaque, somewhat shrunken kernels with greyish cast
 
GRMZM2G147685
Feng, F; Song, RT. 2018. Plant Signal Behav pp.doi: 10.1080/15592324.2018.1451709   AT1G49770 (TAIR) Reference: March 14th, 2018
Gene Product: September 14th, 2016
Variation: February 8th, 2018
Gene Model: February 8th, 2018
3 months agosmr4 siamese-related4:
 
GRMZM2G019353
Li, FF et al. 2018. Plant Sci pp.doi: 10.1016/j.plantsci.2018.03.007     Reference: March 14th, 2018
Gene Product: March 8th, 2017
Gene Model: March 14th, 2018
3 months agoo*-N1244A opaqueN1244A: etched; striate, white stripe mutable seedling?
4.00 - 4.05
   Neuffer, MG. 1994. Personal communication     Reference: September 1st, 2003
Variation: March 13th, 2018
3 months agopsk2 phytosulfokine2:
3.05
GRMZM2G079290
Lorbiecke, R et al. 2005. J Exp Bot 56: 1805-1819     Reference: January 17th, 2007
Variation: December 30th, 2015
Gene Model: March 13th, 2018
3 months agoms23 male sterile23: pollen mother cells degenerate
8.01 - 8.02
GRMZM2G021276
Liu, YM et al. 2018. Plant Growth Regulation pp.doi: 10.1007/s10725-018-0377-5     Reference: March 9th, 2018
Gene Product: September 14th, 2016
Variation: December 4th, 2016
Gene Model: December 4th, 2016
3 months agoys1 yellow stripe1: yellow tissue between leaf veins, reflects iron deficiency symptoms; defect in Fe-phytosiderophore uptake
5.05 - 5.06
   Chan-Rodriguez, D; Walker, EL. 2018. Frontiers Plant Sci 9:157     Reference: March 9th, 2018
Gene Product: September 1st, 2003
Variation: March 9th, 2018
3 months agoys3 yellow stripe3: yellow tissue between leaf veins, corrected by ferrous iron supplementation
3.04
GRMZM2G063306
Chan-Rodriguez, D; Walker, EL. 2018. Frontiers Plant Sci 9:157   LOC_Os11g04020 (MSU/TIGR)
Os11g0134900 (Gramene)
Reference: March 9th, 2018
Gene Product: September 23rd, 2016
Variation: March 9th, 2018
Gene Model: March 9th, 2018
3 months agoumc1675  : similar to Arabidopsis putative protein phosphatase 2C 62
9.07
GRMZM2G004377
    Variation: September 1st, 2003
Gene Model: March 8th, 2018
3 months agobhlh97 bHLH-transcription factor 97: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
9.07
AC149829.2_FG004
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: March 8th, 2018
3 months agoumc1743  :
9.03
GRMZM2G108570
    Variation: September 1st, 2003
Gene Model: March 8th, 2018
3 months agoumc1789  :
9.06
GRMZM2G008638
    Variation: September 1st, 2003
Gene Model: March 8th, 2018
3 months agoumc109  : NCBI: Serine/threonine-protein kinase WNK (With No Lysine)-related
9.01
GRMZM2G136831
Anderson, L, et al. 2004. Genetics. 166:1923-1933     Reference: February 12th, 2011
Variation: March 8th, 2018
Gene Model: April 20th, 2017
3 months agoumc1137  :
9.07
GRMZM2G178106
    Variation: September 1st, 2003
Gene Model: March 7th, 2018
3 months agoumc1170  :
9.02
GRMZM2G016323
    Variation: September 1st, 2003
Gene Model: March 7th, 2018
3 months agoumc1258  :
9.03
GRMZM2G396553
    Variation: September 1st, 2003
Gene Model: March 7th, 2018
3 months agoumc1267  :
9.03 - 9.04
GRMZM2G010884
    Variation: September 1st, 2003
Gene Model: March 7th, 2018
3 months agoumc1271  :
9.03
GRMZM2G342738
    Variation: September 1st, 2003
Gene Model: March 7th, 2018
3 months agoumc1366  :
9.06
GRMZM5G824920
    Variation: September 1st, 2003
Gene Model: March 7th, 2018
3 months agoumc1492  :
9.04
GRMZM2G151387
    Variation: September 1st, 2003
Gene Model: March 7th, 2018
3 months agoumc1586  :
9.03
GRMZM2G071602
    Variation: September 1st, 2003
Gene Model: March 7th, 2018
3 months agolrt1 lateral rootless1: few lateral root primordia form in primary and seminal roots, none proliferate; no response to naphthalene acetic acid or indole acetic acid; responds to indole butyric acid and to S-nitroso-N-acetylpenicillamine, a nitric oxide (NO) donor (Schlicht et al 2013)
2.00 - 2.03
   Hochholdinger, F et al. 2018. Frontiers Plant Sci pp.doi: 10.3389/fpls.2018.00143     Reference: March 6th, 2018
Variation: September 1st, 2003
3 months agoumc1078  :
9.04
GRMZM2G323479
    Variation: September 1st, 2003
Gene Model: March 6th, 2018
3 months agoumc1120  : similar to Arabidopsis nodulation protein-like proteinNCBI, "not annotated on reference assembly": P-loop containing nucleoside triphosphate hydrolase superfamily protein P-loop containing nucleoside triphosphate hydrolase superfamily protein
9.04
GRMZM2G136538
    Variation: September 1st, 2003
Gene Model: March 6th, 2018
3 months agorth1 roothair defective1: roothairs do not elongate in rth1 homozygotes; plants are dwarfed and appear nutrient deficient; genomic sequence
1.09
   Hochholdinger, F et al. 2018. Frontiers Plant Sci pp.doi: 10.3389/fpls.2018.00143     Reference: March 6th, 2018
Variation: April 2nd, 2007
3 months agorum1 rootless with undetectable meristems1: primordia for seminal roots and for laterals on the primary root absent
 
GRMZM2G037368
Hochholdinger, F et al. 2018. Frontiers Plant Sci pp.doi: 10.3389/fpls.2018.00143     Reference: March 6th, 2018
Gene Product: June 16th, 2014
Variation: June 16th, 2014
Gene Model: June 16th, 2014
3 months agotrpp10 trehalose-6-phosphate phosphatase10:
9.01
GRMZM2G080354
Figueroa, D; Bass, HW. 2012. Cell Chromosome Res. 20:363-80     Reference: July 18th, 2014
Gene Product: September 15th, 2013
Variation: September 1st, 2003
Gene Model: March 2nd, 2018
3 months agofdh2 formate dehydrogenase2:
9.03
GRMZM2G049811
    Variation: May 27th, 2014
Gene Model: March 2nd, 2018
3 months agocsu623a  :
9.03
GRMZM2G463953
    Variation: September 1st, 2003
Gene Model: March 1st, 2018
3 months agocsu471  : simiilar to Arabidopsis metallophosphatase domain-containing protein
9.02
GRMZM2G109720
    Variation: September 1st, 2003
Gene Model: March 1st, 2018
3 months agoaga1 alkaline galactosidase1:
 
GRMZM2G340656
Li, T et al. 2017. Molecular Plant 10:1540-1555     Reference: March 1st, 2018
Gene Product: March 1st, 2018
Gene Model: March 1st, 2018
3 months agoaga2 alkaline galactosidase2:
 
GRMZM2G127147
Li, T et al. 2017. Molecular Plant 10:1540-1555     Reference: March 1st, 2018
Gene Product: March 1st, 2018
Gene Model: March 1st, 2018
3 months agoaga3 alkaline galactosidase3:
 
GRMZM2G037265
Li, T et al. 2017. Molecular Plant 10:1540-1555     Reference: March 1st, 2018
Gene Product: March 1st, 2018
Gene Model: March 1st, 2018
3 months agoaga4 alkaline galactosidase4:
 
GRMZM2G077181
Li, T et al. 2017. Molecular Plant 10:1540-1555     Reference: March 1st, 2018
Gene Product: March 1st, 2018
Gene Model: March 1st, 2018
3 months agoaga5 alkaline galactosidase5:
 
GRMZM2G047292
Li, T et al. 2017. Molecular Plant 10:1540-1555     Reference: March 1st, 2018
Gene Product: March 1st, 2018
Gene Model: March 1st, 2018
3 months agoaga6 alkaline galactosidase5:
 
GRMZM2G311756
Li, T et al. 2017. Molecular Plant 10:1540-1555     Reference: March 1st, 2018
Gene Product: March 1st, 2018
Gene Model: March 1st, 2018
3 months agorafs2 raffinose synthase2:
 
GRMZM2G050273
Li, T et al. 2017. Molecular Plant 10:1540-1555     Reference: March 1st, 2018
Gene Product: March 1st, 2018
Gene Model: March 1st, 2018
3 months agorafs3 raffinose synthase3:
 
   Li, T et al. 2017. Molecular Plant 10:1540-1555     Reference: March 1st, 2018
Gene Product: March 1st, 2018
3 months agogols1 galactinol synthase1: Similar to water stress-induced protein of rice (per Baysdorfer, C.)
1.03
GRMZM2G165919
Zhao, T; Martin, D; Meeley, R; Downie, B. 2004. Physiol Plant. 121:647-655     Reference: August 11th, 2005
Gene Product: March 1st, 2018
Variation: January 26th, 2010
Gene Model: December 24th, 2015
3 months agogols2 galactinol synthase2: Expessed during post-imbibition dehydration stress
 
GRMZM5G872256
Zhao, T; Martin, D; Meeley, R; Downie, B. 2004. Physiol Plant. 121:647-655     Reference: August 11th, 2005
Gene Product: March 1st, 2018
Variation: January 26th, 2010
Gene Model: December 24th, 2015
3 months agogols3 galactinol synthase3: Expessed late in seed development
9.04
GRMZM5G872256
Li, T et al. 2017. Molecular Plant 10:1540-1555     Reference: March 1st, 2018
Gene Product: March 1st, 2018
Variation: January 26th, 2010
Gene Model: December 24th, 2015
3 months agobnl5.09a  :
9.06
GRMZM2G024718
Armstrong, CL et al. 1992. Theor Appl Genet 84:755-762     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: February 28th, 2018
3 months agobnl8.17  :
9.04 - 9.05
GRMZM2G072573
Grant, D et al. 1993. MNL 67:55-61     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: February 28th, 2018
3 months agoAY109764  :
9.04
GRMZM2G314769
    Variation: September 25th, 2007
Gene Model: February 28th, 2018
3 months agoAY109792  :
9.04
GRMZM2G358238
    Variation: July 29th, 2004
Gene Model: February 28th, 2018
3 months agoAY110217  :
9.04
GRMZM2G131785
    Variation: September 25th, 2007
Gene Model: February 28th, 2018
3 months agoAY110141  :
9.06
GRMZM2G119627
    Variation: July 29th, 2004
Gene Model: February 28th, 2018
3 months agoumc1961  :
2.02
GRMZM2G155217
    Variation: September 1st, 2003
Gene Model: February 27th, 2018
3 months agoAW216329  :
9.08
GRMZM2G055785
    Variation: July 29th, 2004
Gene Model: February 27th, 2018
3 months agogras45 GRAS-transcription factor 45: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
9.07
GRMZM5G885274
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 25th, 2007
Gene Model: February 27th, 2018
3 months agodek37 defective kernel37: mutant seeds are small and misshapen; seedlings don't survive after emergence of the second leaf; encodes a P-type PPR protein that participates in cis-splicing of mitochondrial nad2 intron 1
 
GRMZM2G021319
Dai, DW et al. 2018. Genetics 208:1069-1082     Reference: February 27th, 2018
Gene Product: December 27th, 2016
Variation: January 6th, 2018
Gene Model: January 6th, 2018
3 months agocyp23 cytochrome P-450 23:
 
GRMZM2G018612
Yoneyama, K et al. 2018. New Phytol pp.doi: 10.1111/nph.15055     Reference: February 27th, 2018
Gene Product: February 26th, 2018
Gene Model: February 27th, 2018
3 months agocyp24 cytochrome P-450 24:
 
GRMZM2G023952
Yoneyama, K et al. 2018. New Phytol pp.doi: 10.1111/nph.15055     Reference: February 27th, 2018
Gene Product: February 26th, 2018
Gene Model: February 27th, 2018
3 months agocpps2 copalyl diphosphate synthase2: encodes ent-kaurene synthase, a copalyl diphosphate synthase protein having close identity with An1 gene product; likely duplicate function explains why an1 plants are not fully dwarfed (Harris et al. 2005)
1.04
GRMZM2G044481
Mafu, S et al. 2018. Plant Physiol pp.doi: 10.1104/pp.17.01351     Reference: February 26th, 2018
Gene Product: August 16th, 2012
Variation: January 22nd, 2018
Gene Model: September 12th, 2011
Recommended by Ed Coe:
January 8th, 2008
3 months agoks1 kaurene synthase1:
 
GRMZM2G016922
Mafu, S et al. 2018. Plant Physiol pp.doi: 10.1104/pp.17.01351     Reference: February 26th, 2018
Gene Product: August 16th, 2012
Gene Model: October 27th, 2014
3 months agocyp22 cytochrome P-450 22:
 
GRMZM2G067591
Mafu, S et al. 2018. Plant Physiol pp.doi: 10.1104/pp.17.01351     Reference: February 26th, 2018
Gene Product: February 26th, 2018
Gene Model: February 26th, 2018
3 months agocpr2 cytochrome P-450 reductase2:
 
GRMZM2G104294
Mafu, S et al. 2018. Plant Physiol pp.doi: 10.1104/pp.17.01351     Reference: February 26th, 2018
Gene Product: February 26th, 2018
Gene Model: February 26th, 2018
3 months agourb2 unhealthy ribosome biogenesis2: mutant showed decreased ratios of 60S/40S and 80S/40S and increased ratios of polyribosomes; had thin kernels and small seedlings
 
GRMZM2G457178
Wang, HQ et al. 2018. pp.DOI: 10.1111/nph.15057     Reference: February 26th, 2018
Variation: February 26th, 2018
Gene Model: February 26th, 2018
3 months agobnlg1316  :
2.08
GRMZM2G086805
    Variation: September 1st, 2003
Gene Model: February 22nd, 2018
3 months agoumc1581  :
2.05
GRMZM5G896902
Noonan, J et al. 2017. Int J Mol Sci 8:E1938     Reference: September 16th, 2017
Variation: September 1st, 2003
Gene Model: February 22nd, 2018
3 months agoumc1604  :
2.08
GRMZM2G109120
    Variation: September 1st, 2003
Gene Model: February 22nd, 2018
3 months agosbp20 SBP-transcription factor 20: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Liu, CX et al. 2018. Euphytica 214:52     Reference: February 22nd, 2018
Gene Product: December 18th, 2014
Variation: February 22nd, 2018
3 months agoumc1658  :
2.06
GRMZM2G083972
    Variation: September 1st, 2003
Gene Model: February 22nd, 2018
3 months agoumc1755  :
2.06
GRMZM2G398089
    Variation: September 1st, 2003
Gene Model: February 22nd, 2018
3 months agogrftf8 GRF-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.02
GRMZM2G041223
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: February 22nd, 2018
3 months agoIDP825  : similar to Arabidopsis DNA-directed RNA polymerase II subunit RPB3-A
2.06
GRMZM5G874167
    Variation: March 31st, 2005
Gene Model: February 22nd, 2018
3 months agoumc1422  :
2.02
GRMZM2G031904
    Variation: February 21st, 2018
Gene Model: February 21st, 2018
3 months agobzip121 bZIP-transcription factor 121: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.04
GRMZM2G112483
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: February 21st, 2018
3 months agoumc1454  :
2.04
AC235541.1_FG002
    Variation: September 1st, 2003
Gene Model: February 21st, 2018
3 months agoumc1465  : similar to Arabidopsis carbohydrate-binding X8 domain-containing protein
2.04
GRMZM2G447691
    Variation: September 1st, 2003
Gene Model: February 21st, 2018
3 months agoumc1541  :
2.04
GRMZM2G124079
    Variation: September 1st, 2003
Gene Model: February 21st, 2018
3 months agoereb24  : similar to Arabidopsis AP2-like ethylene-responsive transcription factorLocus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.02
GRMZM2G086573
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: February 21st, 2018
3 months agoumc1560  :
2.07
GRMZM2G179459
    Variation: September 1st, 2003
Gene Model: February 21st, 2018
3 months agocsu134b(thf)  :
5.00
GRMZM2G034182
Zhao, H et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.17.01467     Reference: February 21st, 2018
Gene Product: August 28th, 2012
Gene Model: August 28th, 2012
3 months agohb2 hemoglobin2: suppression of expression is associated with programmed cell death (Huang et al 2014)
6.06
GRMZM2G168898
Kapoor, K et al. 2018. Planta pp.doi: 10.1007/s00425-018-2862-5     Reference: February 20th, 2018
Gene Product: February 20th, 2018
Gene Model: May 15th, 2014
3 months agohb1 hemoglobin1: suppression of expression associated with programmed cell death (Huang et al 2014)cDNA sequence; SSR umc1733;cloned hb gene codes for a predicted protein of 164 amino acids
9.06
GRMZM2G067402
Kapoor, K et al. 2018. Planta pp.doi: 10.1007/s00425-018-2862-5     Reference: February 20th, 2018
Gene Product: February 20th, 2018
Variation: September 24th, 2010
Gene Model: May 15th, 2014
4 months agomac1 multiple archesporial cells1: (was lar*-487) several archesporial cells undergo normal meiosis; plants partially female sterile but completely male sterileBeware: this locus could accidentally be confused with the act1 (actin 1) locus, which also was called MAc1 in past publications!
10.03
GRMZM2G027522
van der Linde, K et al. 2018. Plant Cell pp.doi: 10.1105/tpc.17.00238     Reference: February 17th, 2018
Gene Product: August 2nd, 2012
Variation: August 10th, 2012
Gene Model: July 26th, 2012
Recommended by Chung-Ju Rachel Wang:
December 19th, 2013
4 months agoltk1 leucine-rich transmembrane protein kinase1: endosperm cDNA, multiple copy; one copy is near pds1
1.02
GRMZM2G153393
Li, Z et al. 1997. Maize Genetics Conference Abstracts 39     Reference: September 1st, 2003
Gene Product: February 17th, 2018
Variation: September 1st, 2003
Gene Model: July 28th, 2016
4 months agoereb197 AP2-EREBP-transcription factor 197: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.02
GRMZM2G174784
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: February 17th, 2018
4 months agoltk2 leucine-rich transmembrane protein kinase2: belongs to a small gene family; ltk2 shares 98.6% nucleotide sequence homology with ltk3, and these genes could be products of a recent gene duplication located on chromosome 9L.
9.07
GRMZM2G330907
Li, ZH and Wurtzel, E. 1998. Plant Mol Biol 37:749-761     Reference: September 1st, 2003
Gene Product: February 17th, 2018
Variation: January 10th, 2013
Gene Model: December 27th, 2016
4 months agosweet13b sugars will eventually be exported transporter13b:
 
GRMZM2G021706
Bezrutczyk, M et al. 2018. New Phytol pp.doi: 10.1111/nph.15021     Reference: February 17th, 2018
Gene Product: November 4th, 2015
Variation: February 17th, 2018
Gene Model: November 3rd, 2015
4 months agosweet13c sugars will eventually be exported transporter13c:
 
GRMZM2G179349
Bezrutczyk, M et al. 2018. New Phytol pp.doi: 10.1111/nph.15021     Reference: February 17th, 2018
Gene Product: November 4th, 2015
Variation: February 17th, 2018
Gene Model: November 3rd, 2015
4 months agomsp1 multiple sporocyte1: A conserved ligand-receptor pair with mac1
 
GRMZM2G447447
van der Linde, K et al. 2018. Plant Cell pp.doi: 10.1105/tpc.17.00238   AT5G07280 (TAIR)
LOC_Os01g68870 (MSU/TIGR)
Reference: February 17th, 2018
Gene Product: February 17th, 2018
Gene Model: February 17th, 2018
4 months agomsp2 multiple sporocyte2: A conserved ligand-receptor pair with mac1
 
GRMZM2G306771
van der Linde, K et al. 2018. Plant Cell pp.doi: 10.1105/tpc.17.00238   AT5G07280 (TAIR)
LOC_Os01g68870 (MSU/TIGR)
Reference: February 17th, 2018
Gene Product: February 17th, 2018
Gene Model: February 17th, 2018
4 months agomsp3 multiple sporocyte3: A conserved ligand-receptor pair with mac1
 
GRMZM2G107484
van der Linde, K et al. 2018. Plant Cell pp.doi: 10.1105/tpc.17.00238   AT5G07280 (TAIR)
LOC_Os01g68870 (MSU/TIGR)
Reference: February 17th, 2018
Gene Product: February 17th, 2018
Gene Model: February 17th, 2018
4 months agosweet13a sugars will eventually be exported transporter13a:
10.03
GRMZM2G173669
Bezrutczyk, M et al. 2018. New Phytol pp.doi: 10.1111/nph.15021     Reference: February 17th, 2018
Gene Product: November 4th, 2015
Variation: February 17th, 2018
Gene Model: December 28th, 2017
4 months agobzip40 bZIP-transcription factor 40: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.06
AC203957.3_FG004
Perduns, R et al. 2015. Plant Physiol 168:1378-1388     Reference: October 26th, 2015
Variation: September 1st, 2003
Gene Model: February 16th, 2018
4 months agoumc1108  :
2.06
GRMZM2G123972
    Variation: September 1st, 2003
Gene Model: February 16th, 2018
4 months agoumc1252  :
2.09
GRMZM2G023585
    Variation: February 16th, 2018
Gene Model: February 16th, 2018
4 months agoplatz5 PLATZ-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.02
GRMZM2G131280
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: February 16th, 2018
Gene Model: February 16th, 2018
4 months agogeb1 glucan endo-1,3-beta-glucosidase homolog1: cDNA sequence homologous to 1,3-beta glucanase, possibly single copy
3.05
GRMZM2G065585
Li, XH et al. 2018. Frontiers Plant Sci 9:65     Reference: February 16th, 2018
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: October 30th, 2015
4 months agoabc4 aberrant chloroplast development4: member of the ubiquitinA (UbiA) prenyltransferase domain containing gene family (Hunter et al., 2018)
1.02
GRMZM2G097283
Hunter, CT, III et al. 2018. Plant J 93:799-813   At1g60600 (TAIR) Reference: February 15th, 2018
Gene Product: January 8th, 2018
Gene Model: January 8th, 2018
4 months agow3 white seedling3: like vp2; w3-8686 pale endosperm, pale green seedling in dim light
2.08 - 2.07
GRMZM2G113476
Hunter, CT, III et al. 2018. Plant J 93:799-813   AT3G11945 (TAIR) Reference: February 15th, 2018
Gene Product: January 8th, 2018
Variation: January 8th, 2018
Gene Model: January 8th, 2018
4 months agoumc1004  :
2.06
GRMZM2G098076
    Variation: September 1st, 2003
Gene Model: February 15th, 2018
4 months agonactf36 NAC-transcription factor 36: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.04
GRMZM2G081930
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: February 15th, 2018
4 months agoumc1028  :
2.05
GRMZM2G115658
    Variation: September 1st, 2003
Gene Model: February 15th, 2018
4 months agohggt1 homogentisate geranylgeranyl transferase1: vitamin E synthesis; contributes to variation in levels of tocotrienol (Lipka et al 2013)member of the ubiquitinA (UbiA) prenyltransferase domain containing gene family (Hunter et al., 2018)
 
GRMZM2G173358
Hunter, CT, III et al. 2018. Plant J 93:799-813     Reference: February 15th, 2018
Gene Product: January 8th, 2018
Gene Model: June 26th, 2013
4 months agohpt1 homogentisate phytyltransferase1: member of the ubiquitinA (UbiA) prenyltransferase domain containing gene family (Hunter et al., 2018)
 
GRMZM2G048472
Hunter, CT, III et al. 2018. Plant J 93:799-813     Reference: February 15th, 2018
Gene Product: January 8th, 2018
Gene Model: January 8th, 2018
4 months agohggt3 homogentisate geranylgeranyltransferase3: member of the ubiquitinA (UbiA) prenyltransferase domain containing gene family (Hunter et al., 2018)
 
GRMZM5G848876
Hunter, CT, III et al. 2018. Plant J 93:799-813     Reference: February 15th, 2018
Gene Product: January 8th, 2018
Gene Model: January 8th, 2018
4 months agohggt2 homogentisate geranylgeranyltransferase3: member of the ubiquitinA (UbiA) prenyltransferase domain containing gene family (Hunter et al., 2018)
 
GRMZM2G410644
Hunter, CT, III et al. 2018. Plant J 93:799-813     Reference: February 15th, 2018
Gene Product: January 8th, 2018
Gene Model: January 8th, 2018
4 months agochlg1 chlorophyll synthase G1: member of the ubiquitinA (UbiA) prenyltransferase domain containing gene family (Hunter et al., 2018)
 
GRMZM2G162672
Hunter, CT, III et al. 2018. Plant J 93:799-813     Reference: February 15th, 2018
Gene Product: January 8th, 2018
Gene Model: January 8th, 2018
4 months agocox10a cytochrome c oxidase subunit10a: member of the ubiquitinA (UbiA) prenyltransferase domain containing gene family (Hunter et al., 2018)
 
GRMZM2G178859
Hunter, CT, III et al. 2018. Plant J 93:799-813     Reference: February 15th, 2018
Gene Product: September 1st, 2003
Gene Model: January 8th, 2018
4 months agocox10b cytochrome c oxidase subunit10b: member of the ubiquitinA (UbiA) prenyltransferase domain containing gene family (Hunter et al., 2018)
 
GRMZM2G162776
Hunter, CT, III et al. 2018. Plant J 93:799-813     Reference: February 15th, 2018
Gene Product: September 1st, 2003
Gene Model: January 8th, 2018
4 months agophpt1 para-hydroxybenzoate-polyprenyltransferase1: member of the ubiquitinA (UbiA) prenyltransferase domain containing gene family (Hunter et al., 2018)
 
GRMZM2G048472
Hunter, CT, III et al. 2018. Plant J 93:799-813     Reference: February 15th, 2018
Gene Product: January 8th, 2018
Gene Model: January 8th, 2018
4 months agotacs1 terminal acidic SANT 1: cDNA expressed in meristems; similar to rice anther indehiscence1 (aid1) gene
2.08
GRMZM2G035356
Marian, CO; Bass, HW. 2005. Biochim Biophys Acta. 14:81-86     Reference: February 7th, 2005
Variation: February 14th, 2018
Gene Model: February 14th, 2018
Recommended by Ed Coe:
January 8th, 2008
4 months agomybr98 MYB-related-transcription factor 98: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: February 14th, 2018
4 months agohm1 Helminthosporium carbonum susceptibility1: disease lesions vs. yellowish flecks (Hm1, resistant) on leaves with Cochliobolus carbonum race 1
1.06
   Meeley, RB; Walton, JD. 1993. Advances in Molecular Genetics of Plant-Microbe Interactions 2:463-467     Reference: February 12th, 2018
Gene Product: May 23rd, 2014
Variation: September 1st, 2003
4 months agohm2 Helminthosporium carbonum susceptibility2: dominant Hm2 plants resistant to Cochliobolus carbonum; like Hm1, masked by Hm1
9.03 - 9.04
   Meeley, RB; Walton, JD. 1993. Advances in Molecular Genetics of Plant-Microbe Interactions 2:463-467     Reference: February 12th, 2018
Gene Product: May 23rd, 2014
Variation: October 5th, 2007
4 months agorp1 resistance to Puccinia sorghi1: dominant Rp1 resistant
10.01
GRMZM2G069382
Hu, Y et al. 2018. Frontiers Plant Sci 9:110     Reference: February 10th, 2018
Variation: April 1st, 2015
Gene Model: January 8th, 2018
4 months agobhlh175 bHLH-transcription factor 175: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Feng, F et al. 2018. Plant Cell pp.doi: 10.1105/tpc.17.00616   AT3G26744 (TAIR) Reference: February 8th, 2018
Gene Product: September 14th, 2016
4 months agoakin2 AKINbetagamma-1 protein kinase2:
1.03
   Oszvald, M et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.17.01673     Reference: February 7th, 2018
Variation: September 25th, 2007
4 months agobhlh148 bHLH-transcription factor 148: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.02
   Shi, QB et al. 2018. Frontiers Plant Sci 8:2273     Reference: February 7th, 2018
Variation: September 25th, 2007
4 months agora3 ramosa3: branched inflorescence; mutant ears have abnormal long branches at their bases; trehalose biosynthesis
7.06
   Oszvald, M et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.17.01673     Reference: February 7th, 2018
Gene Product: September 15th, 2013
Variation: December 3rd, 2010
4 months agobhlh43 bHLH-transcription factor 43: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.08
GRMZM2G165042
Shi, QB et al. 2018. Frontiers Plant Sci 8:2273     Reference: February 7th, 2018
Variation: September 1st, 2003
Gene Model: July 6th, 2017
4 months agosweet15a sugars will eventually be exported transporter15a:
4.05
GRMZM2G168365
Oszvald, M et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.17.01673     Reference: February 7th, 2018
Gene Product: November 4th, 2015
Variation: September 1st, 2003
Gene Model: November 3rd, 2015
4 months agosweet11 sugars will eventually be exported transporter11:
1.06
GRMZM2G368827
Oszvald, M et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.17.01673     Reference: February 7th, 2018
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
4 months agotrpp2 trehalose-6-phosphate phosphatase2:
 
GRMZM2G140078
Oszvald, M et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.17.01673     Reference: February 7th, 2018
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
4 months agotrpp7 trehalose-6-phosphate phosphatase7:
 
GRMZM2G055150
Oszvald, M et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.17.01673     Reference: February 7th, 2018
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
4 months agotrpp8 trehalose-6-phosphate phosphatase8:
 
GRMZM2G174396
Oszvald, M et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.17.01673     Reference: February 7th, 2018
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
4 months agotrpp11 trehalose-6-phosphate phosphatase11:
 
GRMZM2G178546
Oszvald, M et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.17.01673     Reference: February 7th, 2018
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
4 months agotrps4 trehalose-6-phosphate synthase4:
 
GRMZM2G008226
Oszvald, M et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.17.01673     Reference: February 7th, 2018
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
4 months agotrps5 trehalose-6-phosphate synthase5:
 
GRMZM2G527891
Oszvald, M et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.17.01673     Reference: February 7th, 2018
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
4 months agotrps7 trehalose-6-phosphate synthase7:
 
GRMZM2G123277
Oszvald, M et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.17.01673     Reference: February 7th, 2018
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
4 months agotrps9 trehalose-6-phosphate synthase9:
 
GRMZM2G366659
Oszvald, M et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.17.01673     Reference: February 7th, 2018
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
4 months agotrps10 trehalose-6-phosphate synthase10:
 
GRMZM2G312521
Oszvald, M et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.17.01673     Reference: February 7th, 2018
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
4 months agotrps11 trehalose-6-phosphate synthase11:
 
GRMZM2G122231
Oszvald, M et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.17.01673     Reference: February 7th, 2018
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
4 months agotrps13 trehalose-6-phosphate synthase13:
 
GRMZM2G019183
Oszvald, M et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.17.01673     Reference: February 7th, 2018
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
4 months agosweet1b sugars will eventually be exported transporter1b:
 
GRMZM2G153358
Oszvald, M et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.17.01673     Reference: February 7th, 2018
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
4 months agosweet2 sugars will eventually be exported transporter2:
 
GRMZM2G324903
Oszvald, M et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.17.01673     Reference: February 7th, 2018
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
4 months agosweet3a sugars will eventually be exported transporter3a:
 
GRMZM2G179679
Oszvald, M et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.17.01673     Reference: February 7th, 2018
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
4 months agosweet14b sugars will eventually be exported transporter14b:
 
GRMZM2G015976
Oszvald, M et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.17.01673     Reference: February 7th, 2018
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
4 months agosweet15b sugars will eventually be exported transporter15b:
 
GRMZM5G872392
Oszvald, M et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.17.01673     Reference: February 7th, 2018
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
4 months agosweet16 sugars will eventually be exported transporter16:
 
GRMZM2G107597
Oszvald, M et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.17.01673     Reference: February 7th, 2018
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
4 months agoalla1 allantoinase1:
 
GRMZM2G173413
Oszvald, M et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.17.01673     Reference: February 7th, 2018
Gene Product: February 7th, 2018
Gene Model: February 7th, 2018
4 months agotrpp6 trehalose-6-phosphate phosphatase6:
5.06
GRMZM2G112830
Oszvald, M et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.17.01673     Reference: February 7th, 2018
Gene Product: September 15th, 2013
Gene Model: February 7th, 2018
4 months agohrg1 hydroxyproline rich glycoprotein1: cDNA, genomic clones, peptide sequence, single site (Southern analysis), accumulates in dividing cells, preferentially in provascular cells
2.04
GRMZM2G168651
Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: February 6th, 2018
4 months agorf3 restorer of fertility3: dominant Rf3 restores fertility to cms-S
2.09
   Ren, R et al. 2018. US Patent 9883643     Reference: February 6th, 2018
Gene Product: December 27th, 2016
Variation: September 1st, 2003
4 months agoask2 aspartate kinase2:
2.06
GRMZM2G052935
Wang, X et al. 2007. J Exp Bot 58:2653-2660     Reference: September 9th, 2010
Gene Product: September 1st, 2003
Variation: February 6th, 2018
Gene Model: February 6th, 2018
4 months agohb75 Homeobox-transcription factor 75: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.02
GRMZM2G001289
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: February 6th, 2018
4 months agobnl17.14  : Received as pio200075, but detected no linkage with 10S.
2.10
GRMZM2G345270
Grant, D et al. 1993. MNL 67:55-61     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: February 2nd, 2018
4 months agobnl6.20  :
2.08
GRMZM2G056612
Grant, D et al. 1993. MNL 67:55-61     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: February 2nd, 2018
4 months agomybr51 MYB-related-transcription factor 51:
5.09
GRMZM5G811428
Xu, YJ et al. 2018. Plant Cell Rep pp.doi: 10.1007/s00299-018-2262-0     Reference: February 2nd, 2018
Variation: September 1st, 2003
Gene Model: February 2nd, 2018
4 months agoga2ox4 gibberellin 2-oxidase4:
 
GRMZM2G153359
Coan, MMD et al. 2018. Crop Sci pp.doi: 10.2135/cropsci2017.05.0322     Reference: February 2nd, 2018
Gene Product: October 27th, 2014
Gene Model: October 27th, 2014
4 months agoglk58 G2-like-transcription factor 58: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
6.06
GRMZM2G117854
Xu, YJ et al. 2018. Plant Cell Rep pp.doi: 10.1007/s00299-018-2262-0     Reference: February 2nd, 2018
Variation: September 25th, 2007
Gene Model: February 2nd, 2018
4 months agoasrp2 arginine/serine-rich splicing factor2: RNA binding nuclear splicing protein
2.05
GRMZM2G021223
Gupta, S et al. 2005. Biochim Biophys Acta 1728:105-114     Reference: March 16th, 2009
Variation: February 7th, 2009
Gene Model: February 1st, 2018
4 months agoAY110410  :
2.07
GRMZM5G808017
    Variation: July 29th, 2004
Gene Model: February 1st, 2018
4 months agoAY110535  :
2.00
GRMZM2G348959
    Variation: September 25th, 2007
Gene Model: February 1st, 2018
4 months agoBE640649  :
2.02
GRMZM2G305007
    Variation: July 29th, 2004
Gene Model: February 1st, 2018
4 months agobass1 bile acid sodium symporter1: encodes a plastidial pantoate transporter
 
GRMZM2G123884
Huang, L et al. 2018. Biochem J pp.doi: 10.1042/BCJ20170883   At1g78560 (TAIR) Reference: February 1st, 2018
Gene Product: February 1st, 2018
Gene Model: February 1st, 2018
4 months agoslac1 slow anion channel-associated1: mutants exhibited strong insensitive phenotypes of stomatal closure in response to diverse stimuli
 
GRMZM2G106881
Qi, G-N et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy015     Reference: February 1st, 2018
Gene Product: February 1st, 2018
Variation: February 1st, 2018
Gene Model: February 1st, 2018
4 months agoslac3 slow anion channel-associated3:
 
GRMZM2G447657
Qi, G-N et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy015     Reference: February 1st, 2018
Gene Product: February 1st, 2018
Gene Model: February 1st, 2018
4 months agoslac4 slow anion channel-associated4:
 
GRMZM2G169951
Qi, G-N et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy015     Reference: February 1st, 2018
Gene Product: February 1st, 2018
Gene Model: February 1st, 2018
4 months agoslac2 slow anion channel-associated2:
6.05
GRMZM2G061469
Qi, G-N et al. 2018. Plant Cell Physiol pp.doi: 10.1093/pcp/pcy015     Reference: February 1st, 2018
Gene Product: February 1st, 2018
Gene Model: February 1st, 2018
4 months agozep1 zeaxanthin epoxidase1:
2.04
GRMZM2G127139
Azmach, G et al. 2018. G3 pp.doi: 10.1534/g3.117.300511     Reference: January 31st, 2018
Gene Product: December 10th, 2011
Variation: August 29th, 2011
Gene Model: April 8th, 2013
4 months agolyce1 lycopene epsilon cyclase1: determines qualitative composition of endosperm carotenoids
8.05
GRMZM2G012966
Azmach, G et al. 2018. G3 pp.doi: 10.1534/g3.117.300511     Reference: January 31st, 2018
Gene Product: December 10th, 2011
Variation: October 3rd, 2011
Gene Model: October 3rd, 2011
4 months agoAY109603  :
2.02
GRMZM2G070881
    Variation: July 29th, 2004
Gene Model: January 31st, 2018
4 months agoAY109981  :
2.06
GRMZM2G100484
    Variation: July 29th, 2004
Gene Model: January 31st, 2018
4 months agoAY110266  : similar to M. truncatula N-acetyltransferase ESCO2
2.04
GRMZM2G081689
    Variation: September 25th, 2007
Gene Model: January 31st, 2018
4 months agoAY110389  :
2.09
GRMZM2G012326
    Variation: September 25th, 2007
Gene Model: January 31st, 2018
4 months agohyd3 hydroxylase3: beta-carotene hydroxylase
 
GRMZM2G152135
Azmach, G et al. 2018. G3 pp.doi: 10.1534/g3.117.300511     Reference: January 31st, 2018
Gene Product: December 13th, 2011
Variation: September 3rd, 2011
Gene Model: April 9th, 2013
4 months agoAI668346  :
2.08
GRMZM2G464000
    Variation: July 29th, 2004
Gene Model: January 30th, 2018
4 months agoAW681281  : similar to Arabidopsis TPLATE protein
2.05
GRMZM2G472770
    Variation: July 29th, 2004
Gene Model: January 30th, 2018
4 months agoAY104214  : similar to M. truncatula DEAD-box ATP-dependent RNA helicase
2.03
GRMZM2G059365
    Variation: September 25th, 2007
Gene Model: January 30th, 2018
4 months agoAY109586  :
2.10
GRMZM2G096814
    Variation: July 29th, 2004
Gene Model: January 30th, 2018
4 months agoae1 amylose extender1: glassy, tarnished endosperm; high amylose content; application: highly linear starch is used for food films, fibers, and other industrial purposes
5.04
   Subasinghe, RM et al. 2014. Plant Physiol Biochem 83C:168-179     Reference: November 7th, 2014
Gene Product: June 6th, 2011
Variation: January 29th, 2018
4 months agocct1 CO CO-LIKE TIMING OF CAB1 protein domain1: photoperiod response locus; confers later flowering in teosintes under longer day lengths; many maize inbred lines, including some adapted to tropical regions, have cct1 alleles insensitive to photoperiod (Hung et al 2012)
 
GRMZM2G381691
Zhang, ZH et al. 2018. Plant J pp.doi: 10.1111/tpj.13828   AT5G24930 (TAIR)
LOC_Os07g15770 (MSU/TIGR)
Os07g0261200 (Gramene)
Reference: January 25th, 2018
Gene Product: December 27th, 2017
Variation: December 27th, 2017
Gene Model: July 17th, 2012
4 months agosrs4 SHI/STY (SRS)-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Sanchez, DL et al. 2018. Plant Sci 268:30-38     Reference: January 25th, 2018
Gene Product: April 27th, 2015
4 months agomkk4 MAP kinase kinase4: function inferred from sequence similarity, and gene expression analyses.
 
GRMZM5G878379
Sanchez, DL et al. 2018. Plant Sci 268:30-38     Reference: January 25th, 2018
Gene Product: July 10th, 2013
Gene Model: July 28th, 2016
4 months agonlp15 NLP-transcription factor 15: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.03
GRMZM2G042278
Wang, ZK et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12696     Reference: January 25th, 2018
Variation: March 31st, 2005
Gene Model: October 7th, 2017
4 months agocchh35 Cys2His2 Zinc Finger35: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
10.02
GRMZM2G068710
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: April 4th, 2017
Gene Model: January 23rd, 2018
4 months agocchh3 Cys2His2 Zinc Finger3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.05
GRMZM2G023988
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: April 4th, 2017
Gene Model: January 23rd, 2018
4 months agocchh1 Cys2His2 Zinc Finger1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.05
GRMZM2G380515
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: April 4th, 2017
Gene Model: January 23rd, 2018
4 months agod3 dwarf plant3: like d1, plant short and compact; "d2" mutation(s) are allelic (d2 is lapsed)
9.03
GRMZM2G093195
Wang, BB et al. 2018. BMC Plant Biology 18:17     Reference: January 20th, 2018
Gene Product: August 15th, 2012
Variation: May 19th, 2006
Gene Model: August 15th, 2012
4 months agod5 dwarf plant5: like d1
2.02
   Wang, BB et al. 2018. BMC Plant Biology 18:17     Reference: January 20th, 2018
Gene Product: September 1st, 2003
Variation: December 3rd, 2015
4 months agona1 nana plant1: short, erect dwarf; no response to gibberellins
3.06 - 3.08
GRMZM2G449033
Wang, BB et al. 2018. BMC Plant Biology 18:17     Reference: January 20th, 2018
Gene Product: July 24th, 2012
Variation: December 22nd, 2016
Gene Model: December 20th, 2011
4 months agora1 ramosa1: ear and tassel many-branched; tassel branches taper to tip
7.02
   Wang, BB et al. 2018. BMC Plant Biology 18:17     Reference: January 20th, 2018
Gene Product: April 11th, 2007
Variation: August 20th, 2010
4 months agomyb151 MYB-transcription factor 151: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, BB et al. 2018. BMC Plant Biology 18:17   AT4G37780 (TAIR) Reference: January 20th, 2018
Gene Product: July 25th, 2017
4 months agosbp21 SBP-transcription factor 21: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, BB et al. 2018. BMC Plant Biology 18:17   AT1G27370 (TAIR) Reference: January 20th, 2018
Gene Product: December 18th, 2014
4 months agozfl2 Zea floricaula leafy2: zfl1 and zfl2 double mutants exhibit a disruption of floral organ identity and patterning, as well as defects in inflorescence architecture and in the vegetative to reproductive phase transition.
2.02
   Wang, BB et al. 2018. BMC Plant Biology 18:17     Reference: January 20th, 2018
Variation: October 9th, 2014
4 months agozap1 zea apetala homolog1:
2.10
   Wang, BB et al. 2018. BMC Plant Biology 18:17     Reference: January 20th, 2018
Variation: February 2nd, 2011
5 months agoprh3 protein phosphatase homolog3:
 
GRMZM2G059453
Wang, YG et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-017-0692-7     Reference: January 19th, 2018
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
5 months agoprh4 protein phosphatase homolog4:
 
GRMZM2G166297
Wang, YG et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-017-0692-7     Reference: January 19th, 2018
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
5 months agoprh5 protein phosphatase homolog5:
 
GRMZM2G010855
Wang, YG et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-017-0692-7     Reference: January 19th, 2018
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
5 months agoprh6 protein phosphatase homolog6:
 
GRMZM2G308615
Wang, YG et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-017-0692-7     Reference: January 19th, 2018
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
5 months agoprh7 protein phosphatase homolog7:
 
GRMZM2G082487
Wang, YG et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-017-0692-7     Reference: January 19th, 2018
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
5 months agoprh8 protein phosphatase homolog8:
 
GRMZM2G122228
Wang, YG et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-017-0692-7     Reference: January 19th, 2018
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
5 months agoprh9 protein phosphatase homolog9:
 
GRMZM5G818101
Wang, YG et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-017-0692-7     Reference: January 19th, 2018
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
5 months agoprh10 protein phosphatase homolog10:
 
GRMZM2G019819
Wang, YG et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-017-0692-7     Reference: January 19th, 2018
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
5 months agoprh11 protein phosphatase homolog11:
 
GRMZM2G159811
Wang, YG et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-017-0692-7     Reference: January 19th, 2018
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
5 months agoprh13 protein phosphatase homolog13:
 
GRMZM2G010855
Wang, YG et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-017-0692-7     Reference: January 19th, 2018
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
5 months agoprh14 protein phosphatase homolog14:
 
GRMZM2G102255
Wang, YG et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-017-0692-7     Reference: January 19th, 2018
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
5 months agoprh15 protein phosphatase homolog15:
 
GRMZM2G383807
Wang, YG et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-017-0692-7     Reference: January 19th, 2018
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
5 months agoprh18 protein phosphatase homolog18:
 
GRMZM2G437575
Wang, YG et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-017-0692-7     Reference: January 19th, 2018
Gene Product: September 1st, 2003
Gene Model: January 19th, 2018
5 months agoprh19 protein phosphatase homolog19:
 
GRMZM2G001243
Wang, YG et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-017-0692-7     Reference: January 19th, 2018
Gene Product: September 1st, 2003
Gene Model: January 19th, 2018
5 months agoprh20 protein phosphatase homolog20:
 
GRMZM2G300125
Wang, YG et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-017-0692-7     Reference: January 19th, 2018
Gene Product: September 1st, 2003
Gene Model: January 19th, 2018
5 months agoprh12 protein phosphatase homolog12:
6.07
   Wang, YG et al. 2018. Plant Mol Biol pp.doi: 10.1007/s11103-017-0692-7     Reference: January 19th, 2018
Gene Product: September 1st, 2003
Variation: October 18th, 2016
5 months agomybr71 MYB-related-transcription factor 71: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
10.07
GRMZM2G448104
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: January 18th, 2018
5 months agomybr68 MYB-related-transcription factor 68: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
10.04 - 10.05
GRMZM2G410083
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: January 18th, 2018
5 months agodba3 DNA binding activity3: cDNA pAS13 has binding activity; gene specificsimilar to Arabidopsis calcium-dependent lipid-binding domain-containing protein
10.07
GRMZM2G011513
Mroczek, RJ; Melo, JR; Luce, AC; Hiatt, EN; Dawe, RK. 2006. Genetics. 174:145-154     Reference: October 2nd, 2006
Variation: January 18th, 2018
Gene Model: January 16th, 2018
5 months agoIDP120  :
10.04
GRMZM5G845601
    Variation: March 31st, 2005
Gene Model: January 18th, 2018
5 months agoIDP134  :
10.06
GRMZM2G091534
    Variation: March 31st, 2005
Gene Model: January 18th, 2018
5 months agoms22 male sterile22: pollen mother cells degenerate
7.02
GRMZM2G442791
Nan, G et al. 2017. Development 144:163-172     Reference: January 17th, 2018
Gene Product: August 12th, 2012
Variation: February 12th, 2013
Gene Model: August 11th, 2012
5 months agoms32 male sterile32: like ms1
2.00 - 2.10
GRMZM2G163233
Nan, G et al. 2017. Development 144:163-172     Reference: January 17th, 2018
Gene Product: September 2nd, 2013
Variation: December 4th, 2016
Gene Model: September 2nd, 2013
5 months agophp20626  :
10.00
GRMZM2G151903
Beavis, WD et al. 1991. Theor Appl Genet 83:141-145     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: January 17th, 2018
5 months agoc3h24 C3H-transcription factor 324: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
10.04
GRMZM2G005126
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: January 16th, 2018
5 months agoccp3 cysteine protease3: apoplastic; cysteine protease
10.07
GRMZM2G073465
van der Linde, K et al. 2012. Plant Cell 24:1285-1300     Reference: February 12th, 2014
Gene Product: August 9th, 2015
Variation: September 1st, 2003
Gene Model: January 16th, 2018
5 months agosbp28 SBP-transcription factor 28: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
10.07
GRMZM2G058588
Wu, X et al. 2016. Plant Biotechnol J pp.doi: 10.1111/pbi.12519     Reference: January 25th, 2016
Gene Product: December 18th, 2014
Variation: September 1st, 2003
Gene Model: January 16th, 2018
5 months agobnlg1712  :
10.03
GRMZM2G093858
    Variation: September 1st, 2003
Gene Model: January 16th, 2018
5 months agobnlg2190  :
10.06
GRMZM2G019986
    Variation: September 1st, 2003
Gene Model: January 16th, 2018
5 months agomzetc34  :
10.04
GRMZM2G027241
Katzir, N et al. 1996. Mol Breed 2:291-292     Reference: September 1st, 2003
Variation: January 16th, 2018
Gene Model: January 16th, 2018
5 months agoIDP774  :
10.04
GRMZM2G096695
    Variation: March 31st, 2005
Gene Model: January 16th, 2018
5 months agoabi21 ABI3-VP1-transcription factor 21: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
10.04
GRMZM2G126194
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: March 31st, 2005
Gene Model: January 16th, 2018
5 months agocsu625  :
10.03
GRMZM2G011136
    Variation: September 1st, 2003
Gene Model: January 15th, 2018
5 months agochi4 chalcone flavanone isomerase4: transgenic expression resulted in enhanced anti-insect and antifungal activity
 
GRMZM2G095778
Dowd, P et al. 2018. Plant Gene doi: 10.1016/j.plgene.2018.01.002     Reference: January 15th, 2018
Gene Product: May 8th, 2012
Gene Model: January 15th, 2018
5 months agoIDP582  :
10.03
GRMZM5G807276
    Variation: March 31st, 2005
Gene Model: January 15th, 2018
5 months agoIDP620  :
10.04
GRMZM2G134539
    Variation: March 31st, 2005
Gene Model: January 15th, 2018
5 months agostk3 serine-threonine kinase3: pollen-specific expression
 
GRMZM2G301647
Fan, MX et al. 2018. Plant Biotechnol J pp.doi: 10.1111/pbi.12880     Reference: January 13th, 2018
Gene Product: May 13th, 2014
Variation: January 13th, 2018
Gene Model: May 16th, 2017
5 months agostk1 serine threonine kinase1: mutants have reduced pollen transmission
9.02
   Fan, MX et al. 2018. Plant Biotechnol J pp.doi: 10.1111/pbi.12880     Reference: January 13th, 2018
Gene Product: May 13th, 2014
Variation: October 9th, 2017
5 months agouaz251b(rpS11)  :
2.02
GRMZM2G044800
    Gene Product: September 1st, 2003
Gene Model: January 12th, 2018
5 months agoht1 Helminthosporium turcicum resistance1: dominant Ht1 plants resistant to Exserohilum turcicum
2.08
   Mideros, SX et al. 2017. Phytopathology pp.doi: 10.1094/PHYTO-01-17-0021-R     Reference: January 12th, 2018
Variation: September 1st, 2003
5 months agoht2 Helminthosporium turcicum resistance2: dominant Ht2 plants resistant to Exserohilum turcicum
8.05 - 8.06
   Mideros, SX et al. 2017. Phytopathology pp.doi: 10.1094/PHYTO-01-17-0021-R     Reference: January 12th, 2018
Variation: September 1st, 2003
5 months agorps11 ribosomal protein S11: cDNA sequenced; homology to rps11; two bands hybridize in Southerns
10.06
GRMZM2G044800
Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: September 1st, 2003
Variation: January 24th, 2015
Gene Model: January 12th, 2018
5 months agoAY109829  :
10.07
GRMZM2G040876
    Variation: July 29th, 2004
Gene Model: January 12th, 2018
5 months agoAY110365  :
10.04
GRMZM2G128319
    Variation: July 29th, 2004
Gene Model: January 12th, 2018
5 months agotoc1 timing of cab expression1: Ortholog of Arabidopsis toc1
4.05
GRMZM2G020081
Jin, ML et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12632   AT5G61380 (TAIR) Reference: January 11th, 2018
Gene Product: January 11th, 2018
Gene Model: January 11th, 2018
5 months agopebp8 phosphatidylethanolamine-binding protein8: florigen activity: complements Arabidopsis FT mutants, promoting flowering at short days. Requires functional id1 gene.(Lazakis et al 2011)
 
GRMZM2G179264
Jin, ML et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12632     Reference: January 11th, 2018
Gene Product: May 6th, 2011
Variation: June 19th, 2015
Gene Model: May 6th, 2011
5 months agogpa2 glyceraldehyde-3-phosphate dehydrogenase2: chloroplastic enzyme candidate probed by RFLPs; possibly a pseudogene
10.04
GRMZM2G039723
Quigley, F et al. 1989. J Mol Evol 29:412-421     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Gene Model: January 11th, 2018
5 months agocca1 circadian clock associated1: myb transcription factor - clock gene
 
GRMZM2G014902
Jin, ML et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12632     Reference: January 11th, 2018
Gene Product: July 31st, 2016
Variation: March 18th, 2011
Gene Model: July 30th, 2016
5 months agoGRMZM2G033962  : Targeted region of interest associated with flowering time (Jamann et al., 2017)ortholog of rice heading date repressor OsPRR37
 
GRMZM2G033962
Jin, ML et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12632     Reference: January 11th, 2018
Gene Product: January 11th, 2018
Gene Model: January 4th, 2017
5 months agocct2 CO CO-LIKE TIMING OF CAB1 protein domain2: photoperiod response locus; confers later flowering in teosintes under longer day lengths; knockout mutant causes early flowering under long days
 
GRMZM2G004483
Jin, ML et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12632     Reference: January 11th, 2018
Gene Product: December 27th, 2017
Variation: December 27th, 2017
Gene Model: December 27th, 2017
5 months agoGRMZM2G005732  : ortholog of rice heading date repressor OsPRR37
 
GRMZM2G005732
Jin, ML et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12632     Reference: January 11th, 2018
Gene Product: January 11th, 2018
Gene Model: January 11th, 2018
5 months agotoc2 timing of cab expression2: Ortholog of Arabidopsis toc1
 
GRMZM2G148453
Jin, ML et al. 2018. J Integr Plant Biol pp.doi: 10.1111/jipb.12632   AT5G61380 (TAIR) Reference: January 11th, 2018
Gene Product: January 11th, 2018
Gene Model: January 11th, 2018
5 months agocdpk6 calcium dependent protein kinase6:
4.09
GRMZM2G035843
Mittal, S et al. 2018. Front Chem 5:115     Reference: January 10th, 2018
Gene Product: December 3rd, 2013
Variation: September 1st, 2003
Gene Model: December 19th, 2017
5 months agocdpk4 calcium dependent protein kinase4: cDNA sequence, functional gene product in E. coli
10.06
GRMZM2G321239
Mittal, S et al. 2018. Front Chem 5:115     Reference: January 10th, 2018
Gene Product: December 3rd, 2013
Variation: January 10th, 2018
Gene Model: December 3rd, 2013
5 months agocdpk8 calcium dependent protein kinase8:
7.03
GRMZM2G154489
Mittal, S et al. 2018. Front Chem 5:115     Reference: January 10th, 2018
Gene Product: December 3rd, 2013
Variation: July 22nd, 2015
Gene Model: March 31st, 2015
5 months agocdpk27 calcium dependent protein kinase27:
8.08
GRMZM2G311220
Mittal, S et al. 2018. Front Chem 5:115     Reference: January 10th, 2018
Gene Product: December 3rd, 2013
Variation: September 1st, 2003
Gene Model: January 10th, 2018
5 months agocdpk5 calcium dependent protein kinase5: single copy;
2.02
GRMZM2G314396
Mittal, S et al. 2018. Front Chem 5:115     Reference: January 10th, 2018
Gene Product: December 3rd, 2013
Variation: February 16th, 2015
Gene Model: February 16th, 2015
5 months agopsan2 photosystem I N subunit2:
10.03
GRMZM2G009048
Grant, D et al. 1993. MNL 67:55-61     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Gene Model: January 10th, 2018
5 months agocdpk7 calcium dependent protein kinase7: unpublished root cDNA sequence
4.06
GRMZM2G081310
Mittal, S et al. 2018. Front Chem 5:115     Reference: January 10th, 2018
Gene Product: December 3rd, 2013
Variation: September 1st, 2003
Gene Model: March 31st, 2015
5 months agocdpk11 calcium dependent protein kinase11: encodes a protein that functions in abscisic acid signaling upstream of the MAP kinase encoded by mpk2, aka MPK5 (Ding et al 2012)
 
GRMZM2G047486
Mittal, S et al. 2018. Front Chem 5:115     Reference: January 10th, 2018
Gene Product: July 9th, 2013
Variation: April 3rd, 2015
Gene Model: July 9th, 2013
5 months agocdpk15 calcium dependent protein kinase15:
 
GRMZM2G441511
    Gene Product: December 3rd, 2013
Gene Model: January 10th, 2018
5 months agocdpk16 calcium dependent protein kinase16:
 
GRMZM2G006404
Mittal, S et al. 2018. Front Chem 5:115     Reference: January 10th, 2018
Gene Product: December 3rd, 2013
Gene Model: January 10th, 2018
5 months agocdpk17 calcium dependent protein kinase17:
 
GRMZM2G025387
Mittal, S et al. 2018. Front Chem 5:115     Reference: January 10th, 2018
Gene Product: December 3rd, 2013
Gene Model: January 10th, 2018
5 months agocdpk18 calcium dependent protein kinase18:
 
GRMZM2G027351
Mittal, S et al. 2018. Front Chem 5:115     Reference: January 10th, 2018
Gene Product: December 3rd, 2013
Gene Model: January 10th, 2018
5 months agocdpk19 calcium dependent protein kinase19:
 
GRMZM2G028086
Mittal, S et al. 2018. Front Chem 5:115     Reference: January 10th, 2018
Gene Product: December 3rd, 2013
Gene Model: January 10th, 2018
5 months agocdpk21 calcium dependent protein kinase21:
 
GRMZM2G047479
Mittal, S et al. 2018. Front Chem 5:115     Reference: January 10th, 2018
Gene Product: December 3rd, 2013
Gene Model: January 10th, 2018
5 months agocdpk22 calcium dependent protein kinase22:
 
GRMZM2G157068
Mittal, S et al. 2018. Front Chem 5:115     Reference: January 10th, 2018
Gene Product: December 3rd, 2013
Gene Model: January 10th, 2018
5 months agocdpk23 calcium dependent protein kinase23:
 
GRMZM2G058305
Mittal, S et al. 2018. Front Chem 5:115     Reference: January 10th, 2018
Gene Product: December 3rd, 2013
Gene Model: January 10th, 2018
5 months agocdpk24 calcium dependent protein kinase24:
 
GRMZM2G088361
Mittal, S et al. 2018. Front Chem 5:115     Reference: January 10th, 2018
Gene Product: December 3rd, 2013
Gene Model: January 10th, 2018
5 months agocdpk25 calcium dependent protein kinase25:
 
GRMZM2G109843
Mittal, S et al. 2018. Front Chem 5:115     Reference: January 10th, 2018
Gene Product: December 3rd, 2013
Gene Model: January 10th, 2018
5 months agocdpk26 calcium dependent protein kinase26:
 
GRMZM2G167276
Mittal, S et al. 2018. Front Chem 5:115     Reference: January 10th, 2018
Gene Product: December 3rd, 2013
Gene Model: January 10th, 2018
5 months agocdpk28 calcium dependent protein kinase28:
 
GRMZM2G340224
Mittal, S et al. 2018. Front Chem 5:115     Reference: January 10th, 2018
Gene Product: December 3rd, 2013
Gene Model: January 10th, 2018
5 months agocdpk20 calcium dependent protein kinase20:
8.04
GRMZM2G030673
Mittal, S et al. 2018. Front Chem 5:115     Reference: January 10th, 2018
Gene Product: December 3rd, 2013
Variation: March 31st, 2005
Gene Model: January 10th, 2018
5 months agohis2b6  :
10.04
GRMZM2G046841
Helentjaris, T. 1994. Nucleotide sequence submission to dbEST/GenBank     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Gene Model: January 9th, 2018
5 months agosalt1 SalT homolog1: gene transcript associated with vascular cells localized around phloem cells; function unknown;
10.02
GRMZM2G142891
Furumoto, T et al. 2000. Plant Cell Physiol 41:1200-1209     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: January 9th, 2018
Gene Model: December 12th, 2017
5 months agoggt1 geranylgeranyl transferase1: when expressed in maize callus, it as more resistant to maize insect pests and ear rot fungi
 
GRMZM2G151087
Dowd, P et al. 2018. Agri Gene doi: 10.1016/j.aggene.2018.01.001     Reference: January 9th, 2018
Gene Product: January 9th, 2018
Gene Model: January 8th, 2018
5 months agoS seed color component at R1: anthocyanin pigmentation in aleurone; (see also cms-S)
10.06
GRMZM5G822829
Robbins, TP et al. 1991. Genetics 129:271-283     Reference: December 3rd, 2009
Gene Product: October 13th, 2010
Variation: July 12th, 2010
Gene Model: January 7th, 2018
5 months agor1 colored1: regulates anthocyanin pathway; dominant R1 (S element) confers function in aleurone; dominants represented by R1-r or r1-r (P element) confer function in anthers, leaf tip, brace roots, etc.
10.06
   Li, PC et al. 2018. PLoS One 13:e0190670     Reference: January 6th, 2018
Gene Product: October 13th, 2010
Variation: January 6th, 2018
5 months agosbe1 starch branching enzyme1: maize kernel cDNA sequence is similar to starch branching enzyme I of bacteria, encodes a putative 64-amino acid plastid transit peptide (aka sbe1)
5.03
   Gyawali, A; Auger, DL. 2018. Crop Sci 58:doi: 10.2135/cropsci2017.01.0026     Reference: January 5th, 2018
Gene Product: September 1st, 2003
Variation: January 5th, 2018
5 months agorfl2 restorer fertility lethal2:
 
   Gabay-Laughnan, S et al. 2018. G3 8:291-302     Reference: January 5th, 2018
Variation: November 27th, 2017
5 months agohagtf3 GNAT-transcription factor 3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: January 4th, 2018
Variation: June 7th, 2017
5 months agohag101 histone acetyl transferase GNAT/MYST 101: single copy; enzyme activity confirmed by assay of recombinant protein
5.03
GRMZM2G046021
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: January 4th, 2018
Variation: December 14th, 2012
Gene Model: July 27th, 2016
5 months agohag103a histone acetyl transferase GNAT/MYST103a: hagtf11 locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.04
GRMZM2G100872
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: January 4th, 2018
Variation: September 1st, 2003
Gene Model: January 4th, 2018
5 months agohag103b histone acetyl transferase GNAT/MYST103b: hagtf42 locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
10.04
GRMZM2G359735
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: January 4th, 2018
Variation: September 1st, 2003
Gene Model: January 4th, 2018
5 months agohagtf29 GNAT-transcription factor 29: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
6.05
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: January 4th, 2018
5 months agots1 tassel seed1: tassel pistillate and pendant; if removed, small ear with irregular kernel placement develops
2.04 - 2.05
   Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Gene Product: January 3rd, 2018
Variation: June 11th, 2014
5 months agolox10 lipoxygenase10: green leaf volatiles, circadian, herbivore defense; sequence predicts plastidic location; images show location in non-chlorophyll containing organelles
4.09
GRMZM2G015419
Ogunola, OF et al. 2017. PLoS One 12:e0181265     Reference: July 18th, 2017
Gene Product: January 3rd, 2018
Variation: June 6th, 2014
Gene Model: October 29th, 2015
5 months agolox6 lipoxygenase6:
2.02
GRMZM2G040095
Tolley, J et al. 2017. Plant Gene doi:10.1016/j.plgene.2017.12.002     Reference: December 12th, 2017
Gene Product: January 3rd, 2018
Variation: June 11th, 2014
Gene Model: June 10th, 2014
5 months agoabp5 auxin binding protein homolog5: genomic sequence, promoter-reporter gene fusion functional in maize protoplasts
10.03
GRMZM2G078508
Schwob, E et al. 1993. Plant J 4: 423-432     Reference: March 16th, 2006
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: January 3rd, 2018
5 months agolox2 lipoxygenase2:
3.06
GRMZM2G156861
Tolley, J et al. 2017. Plant Gene doi:10.1016/j.plgene.2017.12.002     Reference: December 12th, 2017
Gene Product: January 3rd, 2018
Variation: July 18th, 2017
Gene Model: June 10th, 2014
5 months agolox7 lipoxygenase7:
10.04
GRMZM2G070092
Ogunola, OF et al. 2017. PLoS One 12:e0181265     Reference: July 18th, 2017
Gene Product: January 3rd, 2018
Variation: April 23rd, 2009
Gene Model: June 10th, 2014
5 months agolox9 lipoxygenase9:
1.02
GRMZM2G017616
Ogunola, OF et al. 2017. PLoS One 12:e0181265     Reference: July 18th, 2017
Gene Product: January 3rd, 2018
Variation: June 12th, 2014
Gene Model: October 23rd, 2013
5 months agolox11 lipoxygenase11:
5.04
GRMZM2G009479
Ogunola, OF et al. 2017. PLoS One 12:e0181265     Reference: July 18th, 2017
Gene Product: January 3rd, 2018
Variation: June 10th, 2014
Gene Model: June 10th, 2014
5 months agolox13 lipoxygenase13:
 
GRMZM5G822593
Ogunola, OF et al. 2017. PLoS One 12:e0181265     Reference: July 18th, 2017
Gene Product: January 3rd, 2018
Gene Model: July 18th, 2017
5 months agoIDP52  :
10.03
GRMZM5G828229
    Variation: March 31st, 2005
Gene Model: January 3rd, 2018
5 months agoIDP524  :
10.04
GRMZM2G177203
    Variation: March 31st, 2005
Gene Model: January 3rd, 2018
5 months agoasrp1 arginine/serine-rich splicing factor1: RNA binding nuclear splicing protein
10.04
GRMZM2G052166
Gupta, S et al. 2005. Biochim Biophys Acta 1728:105-114     Reference: March 16th, 2009
Variation: February 7th, 2009
Gene Model: January 3rd, 2018
5 months agoIDP2353  :
10.02
GRMZM2G164113
    Variation: March 31st, 2005
Gene Model: January 2nd, 2018
5 months agoIDP245  :
10.04
GRMZM2G043737
    Variation: March 31st, 2005
Gene Model: January 2nd, 2018
5 months agoIDP2556  : similar to Arabidopsis splicing factor Prp18-like protein
10.04
GRMZM2G143725
    Variation: March 31st, 2005
Gene Model: January 2nd, 2018
5 months agoIDP2561  :
10.04
GRMZM2G164538
    Variation: March 31st, 2005
Gene Model: January 2nd, 2018
5 months agoIDP2579  :
10.04
GRMZM2G177182
    Variation: March 31st, 2005
Gene Model: January 2nd, 2018
5 months agoIDP258  :
10.01
GRMZM5G803318
    Variation: March 31st, 2005
Gene Model: January 2nd, 2018
5 months agoIDP372  :
10.04
GRMZM2G080199
    Variation: March 31st, 2005
Gene Model: January 2nd, 2018
5 months agoIDP475  : similar to Arabidopsis SKP1-like protein 21
10.03
GRMZM2G029307
    Variation: March 31st, 2005
Gene Model: January 2nd, 2018
5 months agoIDP48  :
10.03
GRMZM2G046861
    Variation: March 31st, 2005
Gene Model: January 2nd, 2018
5 months agoIDP507  :
10.04
GRMZM2G016939
    Variation: March 31st, 2005
Gene Model: January 2nd, 2018
5 months agoIDP1615  :
10.04
GRMZM2G148547
    Variation: March 31st, 2005
Gene Model: January 1st, 2018
5 months agoIDP2392  :
10.04
GRMZM2G155543
    Variation: March 31st, 2005
Gene Model: January 1st, 2018
5 months agoIDP2458  :
10.04
GRMZM2G095826
    Variation: March 31st, 2005
Gene Model: January 1st, 2018
5 months agopzb01301  :
10.02
       Variation: December 31st, 2017
5 months agoIDP103  : similar to Arabidopsis zinc finger CCCH domain-containing protein 46
10.01
GRMZM5G822449
    Variation: March 31st, 2005
Gene Model: December 31st, 2017
5 months agoIDP1448  :
10.01
GRMZM2G031317
    Variation: March 31st, 2005
Gene Model: December 31st, 2017
5 months agoIDP1458  :
10.02
GRMZM2G005848
    Variation: March 31st, 2005
Gene Model: December 31st, 2017
5 months agoAY110016  :
10.07
GRMZM2G037226
    Variation: September 25th, 2007
Gene Model: December 29th, 2017
5 months agoAY110060  : similar to Arabidopsis beta-1,4-N-acetylglucosaminyltransferase
10.00
GRMZM5G832378
    Variation: July 29th, 2004
Gene Model: December 29th, 2017
5 months agoAY110248  : similar to Arabidopsis reticulon-like protein B22
10.03
GRMZM2G149894
    Variation: July 29th, 2004
Gene Model: December 29th, 2017
5 months agoAY110514  :
10.04
GRMZM2G119116
    Variation: July 29th, 2004
Gene Model: December 29th, 2017
5 months agoAI795367  :
10.02
GRMZM2G118286
    Variation: July 29th, 2004
Gene Model: December 28th, 2017
5 months agoAW330564  : similar to M. truncatula Root phototropism protein
10.01
GRMZM2G058595
    Variation: July 29th, 2004
Gene Model: December 28th, 2017
5 months agoyab14 yabby14:
10.05
   Lai, X et al. 2017. Plant J pp.doi: 10.1111/tpj.13806     Reference: December 22nd, 2017
Gene Product: October 16th, 2015
Variation: March 23rd, 2009
Recommended by Marty Sachs:
March 7th, 2007
5 months agogi1 gigantea1: homologous to Arabidopsis photoperiod gene gigantea
8.03
GRMZM2G107101
Lai, X et al. 2017. Plant J pp.doi: 10.1111/tpj.13806     Reference: December 22nd, 2017
Gene Product: September 19th, 2012
Variation: April 23rd, 2013
Gene Model: September 18th, 2012
5 months agogi2 gigantea2: homologous to Arabidopsis photoperiod gene gigantea.
3.03
GRMZM5G844173
Lai, X et al. 2017. Plant J pp.doi: 10.1111/tpj.13806     Reference: December 22nd, 2017
Gene Product: September 19th, 2012
Variation: September 18th, 2012
Gene Model: September 18th, 2012
5 months agoc2 colorless2: colorless aleurone, reduced plant and cob color; C2-Idf dominant inhibitor; duplicate factor with whp1 for pollen color and for anthocyanins
4.08
   Lai, X et al. 2017. Plant J pp.doi: 10.1111/tpj.13806     Reference: December 22nd, 2017
Gene Product: September 1st, 2003
Variation: November 14th, 2013
5 months agogt1 grassy tillers1: numerous basal branches; vegetatively totipotent in combination with id1 and factors for perennialismputative transcription factor that reduces branching, and is induced by shade
1.04
GRMZM2G005624
Lai, X et al. 2017. Plant J pp.doi: 10.1111/tpj.13806     Reference: December 22nd, 2017
Gene Product: March 5th, 2012
Variation: August 18th, 2011
Gene Model: March 5th, 2012
5 months agowhp1 white pollen1: duplicate factor with c2 for pollen color and for anthocyanins
2.08
   Lai, X et al. 2017. Plant J pp.doi: 10.1111/tpj.13806     Reference: December 22nd, 2017
Gene Product: September 1st, 2003
Variation: August 24th, 2013
5 months agoyab1 C2C2-YABBY-transcription factor 1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Lai, X et al. 2017. Plant J pp.doi: 10.1111/tpj.13806     Reference: December 22nd, 2017
Gene Product: October 16th, 2015
5 months agotcptf6 TCP-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Lai, X et al. 2017. Plant J pp.doi: 10.1111/tpj.13806     Reference: December 22nd, 2017
Gene Product: November 2nd, 2014
5 months agowrky79 WRKY-transcription factor 79: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.regulates phytoalexin biosynthetic gene expression
 
   Fu, JY et al. 2017. J Exp Bot pp.doi; 10.1093/jxb/erx436     Reference: December 22nd, 2017
Gene Product: July 24th, 2017
5 months agotga1 teosinte glume architecture1: glumes indurated, erect, long, boat-shaped; factor transferred from teosinte
4.05
GRMZM2G101511
Lai, X et al. 2017. Plant J pp.doi: 10.1111/tpj.13806     Reference: December 22nd, 2017
Gene Product: December 18th, 2014
Variation: May 7th, 2015
Gene Model: October 28th, 2011
5 months agoohp2 opaque2 heterodimerizing protein2: cDNA sequence, SSRs nc007, phi024
5.01
   Lai, X et al. 2017. Plant J pp.doi: 10.1111/tpj.13806     Reference: December 22nd, 2017
Gene Product: September 1st, 2003
Variation: April 25th, 2015
5 months agozfl1 zea floricaula/leafy1: zfl1 and zfl2 double mutants exhibit a disruption of floral organ identity and patterning, as well as defects in inflorescence architecture and in the vegetative to reproductive phase transition.
10.06
   Lai, X et al. 2017. Plant J pp.doi: 10.1111/tpj.13806     Reference: December 22nd, 2017
Variation: February 20th, 2007
5 months agozmm1 Zea mays MADS1: genomic sequence whose putative protein has 94% identity with that of zag2; this pair of MADS box genes, and zmm2 with zag1, may reflect duplications; expression restricted to female inflorescence
10.03
GRMZM2G010669
Lai, X et al. 2017. Plant J pp.doi: 10.1111/tpj.13806     Reference: December 22nd, 2017
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: July 3rd, 2012
5 months agosbe3 starch branching enzyme3:
8.06
   Lai, X et al. 2017. Plant J pp.doi: 10.1111/tpj.13806     Reference: December 22nd, 2017
Gene Product: June 6th, 2011
Variation: June 1st, 2011
5 months agozag2 Zea AGAMOUS homolog2: amino acid sequence, deduced from cDNA sequence, has 49% identity to Arabidopsis, floral homeotic gene product; expression restricted to female inflorescence; near ts4
3.05 - 3.05
   Lai, X et al. 2017. Plant J pp.doi: 10.1111/tpj.13806     Reference: December 22nd, 2017
Gene Product: April 1st, 2011
Variation: October 22nd, 2014
5 months agobif2 barren inflorescence2: recessive few-branched tassel, normally no pollen shed; variable expression on ear with 0-2 spikelets produced at each floral node
1.05
   Lai, X et al. 2017. Plant J pp.doi: 10.1111/tpj.13806   AT2G34650 (TAIR) Reference: December 22nd, 2017
Gene Product: July 19th, 2012
Variation: October 23rd, 2013
5 months agopdrp1 PDK regulatory protein1: encodes a bifunctional protein with two activities; phosphotransferase and protein kinase
2.07
GRMZM2G131286
Chastain, CJ et al. 2017. J Exp Bot pp.doi: 10.1093/jxb/erx471     Reference: December 22nd, 2017
Gene Product: July 28th, 2014
Gene Model: July 28th, 2014
5 months agoyab12 C2C2-YABBY-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G085873
Lai, X et al. 2017. Plant J pp.doi: 10.1111/tpj.13806     Reference: December 22nd, 2017
Gene Product: October 16th, 2015
Gene Model: October 16th, 2015
5 months agoyab6 C2C2-YABBY-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G074124
Lai, X et al. 2017. Plant J pp.doi: 10.1111/tpj.13806     Reference: December 22nd, 2017
Gene Product: October 16th, 2015
Gene Model: July 3rd, 2012
5 months agohex9 hexokinase9:
 
GRMZM2G467069
Wang, XF et al. 2017. Molecular Plant pp.doi: 10.1016/j.molp.2017.12.011     Reference: December 22nd, 2017
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
5 months agopdrp2 PDK regulatory protein2: same protein kinase specific-activity as pdrp1 isoform, but was found to lack the phosphotransferase activity of the bifunctional pdrp1
 
GRMZM2G004880
Chastain, CJ et al. 2017. J Exp Bot pp.doi: 10.1093/jxb/erx471     Reference: December 22nd, 2017
Gene Product: July 28th, 2014
Gene Model: December 22nd, 2017
5 months agotps11 terpene synthase11:
10.03
GRMZM2G127087
Christensen, SA et al. 2017. Planta pp.doi: 10.1007/s00425-017-2830-5     Reference: December 21st, 2017
Gene Product: September 3rd, 2008
Variation: September 3rd, 2008
Gene Model: August 22nd, 2012
5 months agonkd2 naked endosperm2: double mutants have multiple (2-5) layers of peripheral endosperm cells that lack starch granules or other features of starchy endosperm
10.06
GRMZM5G884137
Gontarek, BC; Neelakandan, AK; Wu, H; Becraft, P. 2016. Plant Cell. 0:doi: 10.1105/tpc.16.00609     Reference: January 6th, 2017
Gene Product: January 3rd, 2015
Variation: December 21st, 2017
Gene Model: December 21st, 2017
5 months agotps6 terpene synthase6:
10.03
GRMZM2G127087
Christensen, SA et al. 2017. Planta pp.doi: 10.1007/s00425-017-2830-5     Reference: December 21st, 2017
Gene Product: September 3rd, 2008
Variation: May 28th, 2012
Gene Model: May 28th, 2012
6 months agoumc259a  :
10.05
AC233888.1_FG001
    Variation: April 25th, 2017
Gene Model: December 20th, 2017
6 months agopdk2 pyruvate, orthophosphate dikinase2: cytosolic
8.04
GRMZM2G097457
Lappe, RR et al. 2017. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.1715668115     Reference: December 19th, 2017
Gene Product: July 28th, 2014
Variation: December 19th, 2017
Gene Model: November 21st, 2012

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