Newly Characterized Genes

CHECK HERE FOR DESCRIPTIONS OF NEWLY CHARACTERIZED MAIZE GENES!

With the overwhelming number of genes that are being discovered by phenotypic and sequence analyses, the MaizeGDB staff is missing some that should be included in MaizeGDB. We need your help! Please let us know about new genes that you're working on or have recently read about.

MaizeGDB prefers not to assign formal gene names to gene models based purely on orthology. Known difficulties include inclusivity (there are over 10,000 functionally characterized Arabidopsis genes)* and some likelihood of errors in inferred functions. Unlike gene models, gene names are generally conserved unless differently named genes are found to be allelic. Of particular note, naming priveleges are customarily held by researchers who first confirm function.

We encourage researchers to use the annotation tool on the MaizeGDB gene model pages to add their insights about putative function, especially when not currently part of the Phytozome or Gramene pipelines.

Below is a list of newly reported or newly characterized genes (new reference, new gene product, and/or new variation) with which you may not yet be familiar. The genes are sorted by the last time the gene has been updated. To suggest genes for inclusion in this list, email us and include the gene name, full name, chromosome or bin, and a recent reference.

If you cannot find the gene you would like to recommend in the database, send us an email so that we can add it to the database!

This page is based on our monthly release. The updates are made around 4:00am CST.


         Recommended Genes


Most recent data | Six months | One year | All time

New or updated genes since 2003. The cutoff date is August 1st, 2003.

Last UpdateGeneFull Name : DescriptionChromosome
or Bin
Gene
Model
Recent ReferenceOrthologsUpdate information
2 days agocep8 C-terminally encoded peptide8:
8.03
GRMZM2G061450
Aggarwal, S et al. 2020. Physiology and Molecular Biology of Plants 26:2019-2033     Reference: October 23rd, 2020
Gene Product: October 23rd, 2020
Gene Model: August 30th, 2019
2 days agozim28 ZIM-transcription factor 28: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.02
GRMZM2G116614
Bai, YH et al. 2011. Genomics 98:128-136     Reference: October 23rd, 2020
Variation: September 1st, 2003
Gene Model: December 6th, 2016
2 days agozim32 ZIM-transcription factor 32: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Bai, YH et al. 2011. Genomics 98:128-136     Reference: October 23rd, 2020
Variation: February 17th, 2019
2 days agocep7 C-terminally encoded peptide7:
7.02
GRMZM2G446946
Aggarwal, S et al. 2020. Physiology and Molecular Biology of Plants 26:2019-2033     Reference: October 23rd, 2020
Gene Product: October 23rd, 2020
Gene Model: September 6th, 2018
2 days agomtopvib1 meiotic TopoVI B subunit1: mutant plants exhibited normal vegetative growth but male and female sterility
 
GRMZM2G439198
Jing, JL et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00933     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Variation: October 23rd, 2020
Gene Model: October 21st, 2020
2 days agocep2 C-terminally encoded peptide2:
 
GRMZM2G156026
Aggarwal, S et al. 2020. Physiology and Molecular Biology of Plants 26:2019-2033     Reference: October 23rd, 2020
Gene Product: October 23rd, 2020
Gene Model: October 23rd, 2020
2 days agocep3 C-terminally encoded peptide3:
 
AC205968.3_FG001
Aggarwal, S et al. 2020. Physiology and Molecular Biology of Plants 26:2019-2033     Reference: October 23rd, 2020
Gene Product: October 23rd, 2020
Gene Model: October 23rd, 2020
2 days agocep4 C-terminally encoded peptide4:
 
AC187283.3_FG005
Aggarwal, S et al. 2020. Physiology and Molecular Biology of Plants 26:2019-2033     Reference: October 23rd, 2020
Gene Product: October 23rd, 2020
Gene Model: October 23rd, 2020
2 days agocep6 C-terminally encoded peptide6:
 
AC206165.3_FG009
Aggarwal, S et al. 2020. Physiology and Molecular Biology of Plants 26:2019-2033     Reference: October 23rd, 2020
Gene Product: October 23rd, 2020
Gene Model: October 23rd, 2020
2 days agocep9 C-terminally encoded peptide9:
 
   Aggarwal, S et al. 2020. Physiology and Molecular Biology of Plants 26:2019-2033     Reference: October 23rd, 2020
Gene Product: October 23rd, 2020
2 days agocep10 C-terminally encoded peptide10:
 
   Aggarwal, S et al. 2020. Physiology and Molecular Biology of Plants 26:2019-2033     Reference: October 23rd, 2020
Gene Product: October 23rd, 2020
2 days agoAW036917  :
6.05
GRMZM2G106218
    Variation: October 23rd, 2020
Gene Model: May 30th, 2017
2 days agocep5 C-terminally encoded peptide5:
6.05
GRMZM2G148964
Aggarwal, S et al. 2020. Physiology and Molecular Biology of Plants 26:2019-2033     Reference: October 23rd, 2020
Gene Product: October 23rd, 2020
Variation: March 31st, 2005
Gene Model: October 23rd, 2020
2 days agocep1 C-terminally encoded peptide1:
1.07
GRMZM2G007969
Aggarwal, S et al. 2020. Physiology and Molecular Biology of Plants 26:2019-2033     Reference: October 23rd, 2020
Gene Product: October 23rd, 2020
Gene Model: February 11th, 2020
3 days agopza00067  :
5.04
GRMZM2G151916
    Variation: September 25th, 2007
Gene Model: October 22nd, 2020
3 days agolw2 lemon white2: like lw1
5.05
GRMZM2G137409
Wang, HH et al. 2020. Nature communications 11:5346     Reference: October 22nd, 2020
Gene Product: February 8th, 2019
Variation: October 22nd, 2020
Gene Model: February 8th, 2019
3 days agohyd3 hydroxylase3: beta-carotene hydroxylase
 
GRMZM2G152135
Wang, HH et al. 2020. Nature communications 11:5346     Reference: October 22nd, 2020
Gene Product: December 13th, 2011
Variation: October 22nd, 2020
Gene Model: April 9th, 2013
3 days agodxs2 deoxy xylulose synthase 2: root specific; function inferred from sequence and expression pattern comparison with Medicago trunculata genes
9.03
GRMZM2G493395
Wang, HH et al. 2020. Nature communications 11:5346     Reference: October 22nd, 2020
Gene Product: August 17th, 2004
Variation: October 22nd, 2020
Gene Model: December 9th, 2011
3 days agohppd1 4-hydroxyphenylpyruvate dioxygenase 1:
5.04
GRMZM2G088396
Wang, HH et al. 2020. Nature communications 11:5346     Reference: October 22nd, 2020
Gene Product: June 2nd, 2005
Variation: October 22nd, 2020
Gene Model: July 28th, 2016
4 days agoeng1 endo-1,3-1,4-beta-D-glucanase1: coleoptile enzyme, orthologous to rice enzyme; located in cell wall, IAA- stimulated coleoptile growth inhibited by antibody
4.05
GRMZM2G073079
Blein-Nicolas, M et al. 2020. Genome Res pp.doi: 10.1101/gr.255224.119     Reference: October 21st, 2020
Variation: May 20th, 2009
Gene Model: June 1st, 2017
Recommended by Ed Coe:
January 8th, 2008
4 days agopmi2 phosphomannose isomerase2:
4.02
GRMZM2G456471
Yu, CM et al. 2020. Plant Sci pp.doi: 10.1016/j.plantsci.2020.110676     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Gene Model: April 11th, 2020
4 days agoask1 aspartate kinase1: lysine-threonine resistance in cultures and seedlings, increased threonine in kernels, altered kinetics of aspartate kinase
1.12
GRMZM2G024686
Liu, YW et al. 2016. PLoS One 11:e0148287     Reference: October 21st, 2020
Gene Product: September 1st, 2003
Variation: September 10th, 2010
Gene Model: October 21st, 2020
4 days agophi1 phosphohexose isomerase1: electrophoretic mobility; null allele is known; cytosolic; dimeric; intralocus hybrid bands occur; cDNA clone pGPI1a (Lal & Sachs, 1995)
1.11 - 1.11
GRMZM2G065083
Yu, CM et al. 2020. Plant Sci pp.doi: 10.1016/j.plantsci.2020.110676     Reference: October 21st, 2020
Gene Product: September 1st, 2003
Variation: October 1st, 2014
Gene Model: August 25th, 2014
4 days agodhn1 dehydrin1: protein induced by abscisic acid; cDNA sequence agrees with amino acid sequence (aka dhn3, rab17, rny1)
6.05
   Blein-Nicolas, M et al. 2020. Genome Res pp.doi: 10.1101/gr.255224.119     Reference: October 21st, 2020
Gene Product: September 1st, 2003
Variation: November 20th, 2012
4 days agoask2 aspartate kinase2:
2.06
GRMZM2G052935
Liu, YW et al. 2016. PLoS One 11:e0148287     Reference: October 21st, 2020
Gene Product: September 1st, 2003
Variation: February 6th, 2018
Gene Model: February 6th, 2018
4 days agosod2 superoxide dismutase2: electrophoretic mobility; cytosolic; Cu-Zn dimeric
7.05
   Blein-Nicolas, M et al. 2020. Genome Res pp.doi: 10.1101/gr.255224.119     Reference: October 21st, 2020
Gene Product: February 12th, 2007
Variation: August 2nd, 2013
4 days agocta1 chitinase A1: cDNA sequence corresponds to peptide sequence of maize 28kDa chitinase A
2.04
   Blein-Nicolas, M et al. 2020. Genome Res pp.doi: 10.1101/gr.255224.119     Reference: October 21st, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
4 days agosbp1 SBP-domain protein1: cDNA sequence, SSR's umc1575, umc1624
5.04
GRMZM2G111136
Blein-Nicolas, M et al. 2020. Genome Res pp.doi: 10.1101/gr.255224.119     Reference: October 21st, 2020
Gene Product: July 5th, 2019
Variation: October 8th, 2011
Gene Model: December 18th, 2014
4 days agodps1 dihydrodipicolinate synthase1: cDNA complements E. coli mutant (AT997dapA-) blocked in DHPS (aka dhp1)
 
GRMZM2G027835
Liu, YW et al. 2016. PLoS One 11:e0148287     Reference: October 21st, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: January 5th, 2015
4 days agopmm1 phosphomannomutase1:
2.00
GRMZM2G165535
Yu, CM et al. 2020. Plant Sci pp.doi: 10.1016/j.plantsci.2020.110676     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Gene Model: February 23rd, 2018
4 days agodhn3 dehydrin3:
4.06
GRMZM2G373522
Blein-Nicolas, M et al. 2020. Genome Res pp.doi: 10.1101/gr.255224.119     Reference: October 21st, 2020
Gene Product: August 5th, 2017
Variation: June 18th, 2011
Gene Model: October 16th, 2016
4 days agohsp101 heat-shock protein 101: normal primary roots contain protein HSP101 conferring acclimation at 40C, to 50C shock; null mutants fail to acclimate and shock is lethal
6.07
   Blein-Nicolas, M et al. 2020. Genome Res pp.doi: 10.1101/gr.255224.119     Reference: October 21st, 2020
Gene Product: September 1st, 2003
Variation: December 22nd, 2012
4 days agohsp18f heat shock protein18f: induction by heat shock is developmentally constitutive
3.02
   Blein-Nicolas, M et al. 2020. Genome Res pp.doi: 10.1101/gr.255224.119     Reference: October 21st, 2020
Gene Product: September 1st, 2003
Variation: July 18th, 2014
4 days agoakh2 aspartate kinase homoserine dehydrogenase2: cDNA sequence 75% homologous to carrot threonine sensitive AK-HSDH bifunctional enzyme
2.06
   Liu, YW et al. 2016. PLoS One 11:e0148287     Reference: October 21st, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
4 days agogmp2 mannose-1-phosphate guanylyltransferase2:
8.07
   Yu, CM et al. 2020. Plant Sci pp.doi: 10.1016/j.plantsci.2020.110676     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Variation: July 29th, 2004
4 days agodapf1 diaminopimelate+epimerase1:
1.05
GRMZM2G130332
Liu, YW et al. 2016. PLoS One 11:e0148287     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Gene Model: February 9th, 2020
4 days agogldh1 galactono lactone dehydrogenase1: ascorbate biosynthesis, based on orthology to the Arabidopsis gene vtc2.
2.05
GRMZM2G469969
Yu, CM et al. 2020. Plant Sci pp.doi: 10.1016/j.plantsci.2020.110676     Reference: October 21st, 2020
Gene Product: March 29th, 2013
Gene Model: March 29th, 2013
4 days agopld2 phospholipase D2:
 
GRMZM2G061969
Blein-Nicolas, M et al. 2020. Genome Res pp.doi: 10.1101/gr.255224.119     Reference: October 21st, 2020
Gene Product: August 9th, 2016
Gene Model: August 9th, 2016
4 days agocol18 C2C2-CO-like-transcription factor 18:
 
GRMZM2G148772
Blein-Nicolas, M et al. 2020. Genome Res pp.doi: 10.1101/gr.255224.119     Reference: October 21st, 2020
Gene Product: June 18th, 2018
Gene Model: June 16th, 2018
4 days agoprx39 peroxidase39:
 
GRMZM2G085967
Blein-Nicolas, M et al. 2020. Genome Res pp.doi: 10.1101/gr.255224.119     Reference: October 21st, 2020
Gene Product: September 18th, 2015
Gene Model: September 22nd, 2018
4 days agohsp8 heat shock protein8:
 
GRMZM2G080724
Blein-Nicolas, M et al. 2020. Genome Res pp.doi: 10.1101/gr.255224.119     Reference: October 21st, 2020
Gene Product: January 15th, 2019
Gene Model: January 14th, 2019
4 days agoaas8 auxin amido synthetase8: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G053338
Blein-Nicolas, M et al. 2020. Genome Res pp.doi: 10.1101/gr.255224.119     Reference: October 21st, 2020
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
4 days agoasd1 aspartate-semialdehyde dehydrogenase1:
5.01
GRMZM2G076885
Liu, YW et al. 2016. PLoS One 11:e0148287     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Gene Model: October 21st, 2020
4 days agodhn15 dehydrin15:
 
GRMZM2G147014
Blein-Nicolas, M et al. 2020. Genome Res pp.doi: 10.1101/gr.255224.119     Reference: October 21st, 2020
Gene Product: August 5th, 2017
Gene Model: July 3rd, 2020
4 days agodps2 dihydrodipicolinate synthase2:
 
GRMZM2G556131
Liu, YW et al. 2016. PLoS One 11:e0148287     Reference: October 21st, 2020
Gene Product: September 1st, 2003
Gene Model: October 21st, 2020
4 days agodapf2 diaminopimelate+epimerase2:
 
AC182617.3_FG001
Liu, YW et al. 2016. PLoS One 11:e0148287     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Gene Model: October 21st, 2020
4 days agolysA1 dihydrodipicolinate decarboxylase1:
 
GRMZM2G020446
Liu, YW et al. 2016. PLoS One 11:e0148287     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Gene Model: October 21st, 2020
4 days agolysA2 dihydrodipicolinate decarboxylase2:
 
GRMZM2G090722
Liu, YW et al. 2016. PLoS One 11:e0148287     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Gene Model: October 21st, 2020
4 days agodapat1 diaminopimelate aminotransferase1:
 
GRMZM2G010328
Liu, YW et al. 2016. PLoS One 11:e0148287     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Gene Model: October 21st, 2020
4 days agodapat2 diaminopimelate aminotransferase2:
 
GRMZM2G415117
Liu, YW et al. 2016. PLoS One 11:e0148287     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Gene Model: October 21st, 2020
4 days agodapat3 diaminopimelate aminotransferase3:
 
GRMZM2G119150
Liu, YW et al. 2016. PLoS One 11:e0148287     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Gene Model: October 21st, 2020
4 days agodapB1 dihydrodipicolinate reductase1:
 
GRMZM2G104575
Liu, YW et al. 2016. PLoS One 11:e0148287     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Gene Model: October 21st, 2020
4 days agodapB2 dihydrodipicolinate reductase2:
 
GRMZM2G090241
Liu, YW et al. 2016. PLoS One 11:e0148287     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Gene Model: October 21st, 2020
4 days agogmp1 mannose-1-phosphate guanylyltransferase1:
 
GRMZM2G119300
Yu, CM et al. 2020. Plant Sci pp.doi: 10.1016/j.plantsci.2020.110676     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Gene Model: October 21st, 2020
4 days agopmi1 phosphomannose isomerase1:
 
GRMZM2G121066
Yu, CM et al. 2020. Plant Sci pp.doi: 10.1016/j.plantsci.2020.110676     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Gene Model: October 21st, 2020
4 days agogpp1 galactose-1-phosphate phosphatase1:
 
GRMZM2G034417
Yu, CM et al. 2020. Plant Sci pp.doi: 10.1016/j.plantsci.2020.110676     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Gene Model: October 21st, 2020
4 days agophi3 phosphohexose isomerase3:
 
GRMZM2G140614
Yu, CM et al. 2020. Plant Sci pp.doi: 10.1016/j.plantsci.2020.110676     Reference: October 21st, 2020
Gene Product: September 1st, 2003
Gene Model: October 21st, 2020
4 days agophi2 phosphohexose isomerase2:
 
GRMZM2G076075
Yu, CM et al. 2020. Plant Sci pp.doi: 10.1016/j.plantsci.2020.110676     Reference: October 21st, 2020
Gene Product: September 1st, 2003
Gene Model: October 21st, 2020
4 days agogaldh1 galactose dehydrogenase1:
10.03
GRMZM2G126002
Yu, CM et al. 2020. Plant Sci pp.doi: 10.1016/j.plantsci.2020.110676     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Gene Model: June 29th, 2020
4 days agogme1 GDP-mannose-3'5'-epimerase1:
1.08
GRMZM2G124434
Yu, CM et al. 2020. Plant Sci pp.doi: 10.1016/j.plantsci.2020.110676     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Variation: March 31st, 2005
Gene Model: February 14th, 2019
4 days agomagi2594  :
1.11
GRMZM2G352415
Blein-Nicolas, M et al. 2020. Genome Res pp.doi: 10.1101/gr.255224.119     Reference: October 21st, 2020
Variation: April 24th, 2006
Gene Model: February 16th, 2020
4 days agogme2 GDP-mannose-3'5'-epimerase2:
4.02
GRMZM2G138907
Yu, CM et al. 2020. Plant Sci pp.doi: 10.1016/j.plantsci.2020.110676     Reference: October 21st, 2020
Gene Product: October 21st, 2020
Variation: September 25th, 2007
Gene Model: April 11th, 2020
4 days agoglx1 glyoxylase1:
10.03
GRMZM2G181192
Blein-Nicolas, M et al. 2020. Genome Res pp.doi: 10.1101/gr.255224.119     Reference: October 21st, 2020
Gene Product: October 13th, 2015
Variation: March 5th, 2008
Gene Model: January 23rd, 2015
4 days agoppo1 polyphenol oxidase1: vegetative meristem cDNA 7C02D02
10.03
GRMZM5G851266
Blein-Nicolas, M et al. 2020. Genome Res pp.doi: 10.1101/gr.255224.119     Reference: October 21st, 2020
Gene Product: September 1st, 2003
Variation: January 21st, 2015
Gene Model: January 21st, 2015
5 days agopsei2 cystatin2: cDNA expressed in E. coli inhibits cysteine proteinases; sequence and gene product activity distinct from psei1
8.08
   van Doan, C et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13919     Reference: October 20th, 2020
Gene Product: April 21st, 2008
Variation: January 15th, 2015
5 days agotps23 terpene synthase23: part of defense response to herbivory by western maize rootworm and Spodoptera littoralis but not expressed highly in most North American maize
10.03
GRMZM2G127336
van Doan, C et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13919     Reference: October 20th, 2020
Gene Product: July 21st, 2008
Variation: November 21st, 2017
Gene Model: August 22nd, 2012
5 days agobx1 benzoxazinless1: plastid localized, committed step in cyclic hydroxamates/DIMBOA synthesis; insect resistance in young seedlings; SSR umc1022
4.00
GRMZM2G085381
van Doan, C et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13919     Reference: October 20th, 2020
Gene Product: October 14th, 2011
Variation: April 12th, 2019
Gene Model: October 14th, 2011
5 days agopal1 phenylalanine ammonia lyase homolog1: leaf cDNA csu156 similar to rice phenylalanine ammonia lyase, single copy
5.05
   van Doan, C et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13919     Reference: October 20th, 2020
Gene Product: September 6th, 2019
Variation: September 24th, 2014
5 days agostp1 sugar transport1: leaf cDNA csu142 similar to yeast plasma membrane sugar transport protein, single copy
8.03
   van Doan, C et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13919     Reference: October 20th, 2020
Gene Product: September 1st, 2003
Variation: August 26th, 2015
5 days agosci1 subtilisin-chymotrypsin inhibitor homolog1: cDNA from germinating embryo infected with Fusarium moniliforme; similar to subtilisin-chymotrypsin inhibitor
8.05
   van Doan, C et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13919     Reference: October 20th, 2020
Gene Product: September 1st, 2003
Variation: August 25th, 2015
5 days agoopr7 12-oxo-phytodienoic acid reductase7: peroxisomal; jasmonic acid synthesis; opr7 opr8 double mutants are feminized, and have increased susceptibiliy to insect and fungal pests
 
GRMZM2G148281
van Doan, C et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13919     Reference: October 20th, 2020
Gene Product: September 3rd, 2010
Variation: December 16th, 2019
Gene Model: November 25th, 2013
5 days agolox5 lipoxygenase5:
5.02
GRMZM2G102760
van Doan, C et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13919     Reference: October 20th, 2020
Gene Product: January 3rd, 2018
Variation: April 20th, 2018
Gene Model: June 10th, 2014
5 days agoprp4 pathogenesis related protein4:
7.00
GRMZM2G465226
van Doan, C et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13919     Reference: October 20th, 2020
Gene Product: July 25th, 2018
Variation: August 29th, 2011
Gene Model: November 20th, 2014
5 days agonced5 nine-cis-epoxycarotenoid dioxygenase5:
 
GRMZM2G417954
van Doan, C et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13919     Reference: October 20th, 2020
Gene Product: September 20th, 2012
Variation: September 1st, 2011
Gene Model: September 20th, 2012
5 days agosaur2 small auxin up RNA2:
 
GRMZM2G156470
van Doan, C et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13919     Reference: October 20th, 2020
Gene Product: September 1st, 2003
Gene Model: March 25th, 2020
5 days agotsah1 tryptophan synthase A homolog1: Homologous to tryptophan synthase alpha subunit but does occur as part of native tryptophan synthase. Localized in the cytosol (Kriechbaumer et al 2008). Function unknown.
1.11
GRMZM2G046163
van Doan, C et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13919     Reference: October 20th, 2020
Gene Product: October 14th, 2011
Variation: August 15th, 2014
Gene Model: September 10th, 2018
5 days agoacs6 1-aminocyclopropane-1-carboxylate synthase6:
1.10
GRMZM2G054361
van Doan, C et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13919     Reference: October 20th, 2020
Gene Product: May 16th, 2016
Variation: August 4th, 2008
Gene Model: January 21st, 2016
5 days agopsei9 cystatin9: apoplastic; necessary for Ustilago maydis infection;induced by U. maydis to bypass host immunity provided by apoplostic proteases(van der Linde 2012)
4.03
AC196110.4_FG004
van Doan, C et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13919     Reference: October 20th, 2020
Gene Product: April 21st, 2008
Variation: April 21st, 2008
Gene Model: February 12th, 2014
6 days agolhca1 light harvesting complex A1: leaf cDNA csu800 similar to photosystem I antenna protein
2.08
GRMZM2G038519
Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Gene Product: September 1st, 2003
Variation: February 18th, 2015
Gene Model: February 18th, 2015
6 days agobx14 benzoxazinone synthesis14: encodes an O-methyltransferase that converts DIM2BOA-Glc to HDM2BOA-Glc.
2.05
GRMZM2G127418
Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Gene Product: July 8th, 2013
Variation: June 20th, 2016
Gene Model: June 20th, 2016
6 days agovp1 viviparous1: embryo fails to become dormant, viable if transplanted; some alleles dormant; chlorophyll and carotenoids unaffected; anthocyanins in aleurone suppressed (aka vp4); cDNA
3.05
   Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Gene Product: July 29th, 2015
Variation: August 22nd, 2013
6 days agoy1 yellow endosperm1: reduced carotenoid pigments in endosperm; some alleles affect chlorophyll in seedlings (e.g. y1-8549, y1-pb)
6.01
GRMZM2G300348
Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Gene Product: December 14th, 2011
Variation: August 26th, 2014
Gene Model: September 22nd, 2011
6 days agobnlg2271  :
7.03
GRMZM2G313643
Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Variation: September 1st, 2003
Gene Model: September 10th, 2018
6 days agoereb197 AP2-EREBP-transcription factor 197: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.02
GRMZM2G174784
Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Variation: September 1st, 2003
Gene Model: February 17th, 2018
6 days agocchh2 Cys2His2 Zinc Finger2: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Gene Product: December 6th, 2019
6 days agosbp4 (GRASSIUS) SBP-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Gene Product: July 5th, 2019
6 days agozp15 zein protein, 15kDa15: high methionine; genomic blot indicates one or two copies
6.01 - 6.02
GRMZM2G086294
Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Gene Product: July 8th, 2013
Variation: August 27th, 2013
Gene Model: July 8th, 2013
6 days agoumc2297  :
5.03
GRMZM2G047175
Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Variation: September 25th, 2007
Gene Model: June 23rd, 2018
6 days agolaz8 lazarus ortholog8: functions as a transmembrane organic solute transporter (Liu et al., 2019)
 
GRMZM2G373717
Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Gene Product: July 27th, 2019
Gene Model: July 27th, 2019
6 days agouce20 ubiquitin-conjugating enzyme20: homology to Arabidopsis thaliana SUMO-conjugating enzyme 1 (SCE1)
 
GRMZM2G433968
Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Gene Product: December 19th, 2019
Gene Model: December 19th, 2019
6 days agopfk3 phosphofructokinase3:
 
GRMZM2G401970
Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Gene Product: January 8th, 2020
Gene Model: January 8th, 2020
6 days agokcs22 3-ketoacyl-CoA synthase22:
 
GRMZM2G168956
Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Gene Product: November 1st, 2018
Gene Model: February 13th, 2020
6 days agoppr375 pentatricopeptide repeat protein375: ortholog of Arabidopsis MTL1
 
GRMZM2G030263
Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480   AT5G64320 (TAIR) Reference: October 19th, 2020
Gene Product: December 27th, 2016
Gene Model: September 17th, 2020
6 days agocry1 cryptochrome1:
5.05
GRMZM2G024739
Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Gene Product: August 31st, 2018
Gene Model: August 31st, 2018
6 days agoIDP2400  :
1.12
GRMZM2G021642
Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Variation: March 31st, 2005
Gene Model: February 16th, 2019
6 days agoIDP723  :
2.05
GRMZM2G008864
Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Variation: March 31st, 2005
Gene Model: February 19th, 2019
6 days agodar3 monodehydroascorbate reductase3:
10.03
GRMZM5G828229
Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Gene Product: October 15th, 2020
Variation: March 31st, 2005
Gene Model: January 3rd, 2018
6 days agovp14 viviparous14: viviparous; yellow endosperm; abscisic acid biosynthesis; SSR umc1218
1.08
GRMZM2G014392
Li, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa480     Reference: October 19th, 2020
Gene Product: September 20th, 2012
Variation: June 25th, 2007
Gene Model: May 13th, 2011
7 days agohk2 histidine kinase2: cytokinin responsive histidine protein kinase
3.05
   Yonekura-Sakakibara, K; Kojima, M; Yamaya, T; Sakakibara, H. 2004. Plant Physiol. 134:1654-1661     Reference: July 7th, 2004
Gene Product: May 20th, 2016
Variation: October 18th, 2020
8 days agolyce1 lycopene epsilon cyclase1: determines qualitative composition of endosperm carotenoids
8.05
GRMZM2G012966
Dutta, S et al. 2020. Mol Genet Genomics pp.doi: 10.1007/s00438-020-01734-1     Reference: October 17th, 2020
Gene Product: December 10th, 2011
Variation: October 3rd, 2011
Gene Model: October 3rd, 2011
8 days agowc1 white cap1: dominant Wc1 kernels have pale yellow endosperm if Y1 (pearly white with y1); whiteness is emphasized in soft-starch crowns
9.07
   Dutta, S et al. 2020. Mol Genet Genomics pp.doi: 10.1007/s00438-020-01734-1     Reference: October 17th, 2020
Gene Product: September 20th, 2012
Variation: October 5th, 2012
8 days agocbl1 calcineurin B-like1:
 
GRMZM2G107575
Chen, XJ et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13244     Reference: October 17th, 2020
Gene Product: October 19th, 2016
Gene Model: October 19th, 2016
8 days agocipk42 calcineurin B-like-interacting protein kinase42: mutant plants have less branched tassel and impaired salt stress tolerance at the seedling stage
 
GRMZM2G011919
Chen, XJ et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13244     Reference: October 17th, 2020
Gene Product: August 25th, 2018
Variation: October 17th, 2020
Gene Model: October 17th, 2020
8 days agocbl4 calcineurin B-like2:
6.06
GRMZM2G001221
Chen, XJ et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13244     Reference: October 17th, 2020
Gene Product: October 19th, 2016
Gene Model: October 19th, 2016
8 days agoIDP1657  :
2.07
GRMZM2G154904
    Variation: March 31st, 2005
Gene Model: October 17th, 2020
9 days agosig1 sigma70-like-transcription factor 1:
1.03
GRMZM2G003182
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: December 24th, 2019
Gene Model: October 16th, 2020
Recommended by Ed Coe:
January 25th, 2007
9 days agopropep1 precursor elicitor peptide1:
 
GRMZM5G899080
Poretsky, E et al. 2020. Plant J pp.doi: 10.1111/tpj.15022     Reference: October 15th, 2020
Gene Product: October 16th, 2020
Variation: March 4th, 2011
Gene Model: May 17th, 2013
9 days agosig3 Sigma70-like-transcription factor 3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G003182
Hendron, R-W; Kelly, S. 2019. Plant Physiol pp.doi: 10.1104/pp.19.01053     Reference: December 23rd, 2019
Gene Product: December 24th, 2019
Gene Model: October 16th, 2020
9 days agopropep2 precursor elicitor peptide2:
 
GRMZM2G177412
Poretsky, E et al. 2020. Plant J pp.doi: 10.1111/tpj.15022     Reference: October 15th, 2020
Gene Product: October 16th, 2020
Gene Model: May 17th, 2013
9 days agofdx3 ferredoxin3: ubiquitous, cDNA clone, gene specific probe, amino acid sequence; SSR umc1064, pFD3
1.11
GRMZM2G053458
Kaur, K et al. 2020. J Biosciences 45:132     Reference: October 16th, 2020
Gene Product: September 1st, 2003
Variation: January 29th, 2015
Gene Model: July 25th, 2017
9 days agolox9 lipoxygenase9:
1.02
GRMZM2G017616
Kaur, K et al. 2020. J Biosciences 45:132     Reference: October 16th, 2020
Gene Product: January 3rd, 2018
Variation: June 12th, 2014
Gene Model: October 23rd, 2013
9 days agopropep3 precursor elicitor peptide3: herbivore defense signal
 
GRMZM2G339117
Poretsky, E et al. 2020. Plant J pp.doi: 10.1111/tpj.15022     Reference: October 15th, 2020
Gene Product: October 16th, 2020
Gene Model: May 17th, 2013
9 days agopropep4 precursor elicitor peptide4:
 
GRMZM2G141133
Poretsky, E et al. 2020. Plant J pp.doi: 10.1111/tpj.15022     Reference: October 15th, 2020
Gene Product: October 16th, 2020
Gene Model: May 17th, 2013
9 days agopropep5 precursor elicitor peptide5:
 
GRMZM2G141071
Poretsky, E et al. 2020. Plant J pp.doi: 10.1111/tpj.15022     Reference: October 15th, 2020
Gene Product: October 16th, 2020
Gene Model: May 17th, 2013
9 days agopropep6 precursor elicitor peptide6:
 
GRMZM2G440972
Poretsky, E et al. 2020. Plant J pp.doi: 10.1111/tpj.15022     Reference: October 15th, 2020
Gene Product: October 16th, 2020
Gene Model: October 16th, 2020
9 days agorboh2 respiratory burst oxidase2:
3.07
GRMZM2G138152
Kaur, K et al. 2020. J Biosciences 45:132     Reference: October 16th, 2020
Gene Product: July 15th, 2013
Gene Model: July 2nd, 2013
10 days agoapx2 ascorbate peroxidase2: leaf cDNA, similar to plant cytosolic ascorbate peroxidase; sequence distinct from apx1
2.08
GRMZM2G140667
Qu, CX et al. 2020. Genes 11:1204     Reference: October 15th, 2020
Gene Product: September 1st, 2003
Variation: February 16th, 2015
Gene Model: February 16th, 2015
Recommended by Ed Coe:
January 8th, 2008
10 days agodhar1 dehydroascorbate reductase like1:
8.05
GRMZM5G855672
Sytykiewicz, H. 2016. Int J Mol Sci 17:268     Reference: October 15th, 2020
Gene Product: March 28th, 2013
Gene Model: April 1st, 2013
10 days agoapx11 ascorbate peroxidase11:
10.02
GRMZM2G014397
Sytykiewicz, H. 2016. Int J Mol Sci 17:268     Reference: October 15th, 2020
Gene Product: October 15th, 2020
Gene Model: January 25th, 2018
10 days agoapx1 ascorbate peroxidase homolog:
9.04
GRMZM2G054300
Qu, CX et al. 2020. Genes 11:1204     Reference: October 15th, 2020
Gene Product: October 15th, 2020
Variation: August 10th, 2012
Gene Model: June 19th, 2013
10 days agogsr1 glutathione reductase1: single copy leaf cDNA csu111, similar to pea glutathione reductase
1.01
   Sytykiewicz, H. 2016. Int J Mol Sci 17:268     Reference: October 15th, 2020
Gene Product: September 1st, 2003
Variation: January 30th, 2015
10 days agoprr1 putidaredoxin reductase homolog1: endosperm cDNA 5C04E05 (uaz204), similar to NADH-putidaredoxin reductase
5.06
GRMZM2G320307
Sytykiewicz, H. 2016. Int J Mol Sci 17:268     Reference: October 15th, 2020
Gene Product: September 1st, 2003
Variation: December 18th, 2014
Gene Model: December 18th, 2014
10 days agodar1 monodehydroascorbate reductase homolog1: leaf cDNA csu196 sequence similar to cucumber monodehydroascorbate reductase (NADH)
2.06
GRMZM2G084881
Sytykiewicz, H. 2016. Int J Mol Sci 17:268     Reference: October 15th, 2020
Gene Product: September 1st, 2003
Variation: November 17th, 2012
Gene Model: July 27th, 2016
10 days agoapx3 ascorbate peroxidase homolog3:
 
GRMZM2G137839
Qu, CX et al. 2020. Genes 11:1204     Reference: October 15th, 2020
Gene Product: October 15th, 2020
Variation: August 11th, 2012
Gene Model: June 19th, 2013
10 days agodhar2 dehydroascorbate reductase like2:
 
GRMZM2G005710
Sytykiewicz, H. 2016. Int J Mol Sci 17:268     Reference: October 15th, 2020
Gene Product: March 28th, 2013
Gene Model: August 14th, 2017
10 days agoapx4 ascorbate peroxidase4:
 
GRMZM2G316256
Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60     Reference: June 5th, 2017
Gene Product: October 15th, 2020
Variation: June 5th, 2017
Gene Model: June 5th, 2017
10 days agoapx6 ascorbate peroxidase6:
 
GRMZM2G004211
Sytykiewicz, H. 2016. Int J Mol Sci 17:268     Reference: October 15th, 2020
Gene Product: October 15th, 2020
Gene Model: October 15th, 2020
10 days agoapx7 ascorbate peroxidase7:
 
GRMZM2G047968
    Gene Product: October 15th, 2020
Gene Model: October 15th, 2020
10 days agoapx8 ascorbate peroxidase8:
 
       Gene Product: October 15th, 2020
10 days agoapx9 ascorbate peroxidase9:
 
GRMZM2G460406
Sytykiewicz, H. 2016. Int J Mol Sci 17:268     Reference: October 15th, 2020
Gene Product: October 15th, 2020
Gene Model: October 15th, 2020
10 days agoapx10 ascorbate peroxidase10:
 
GRMZM2G120517
Sytykiewicz, H. 2016. Int J Mol Sci 17:268     Reference: October 15th, 2020
Gene Product: October 15th, 2020
Gene Model: October 15th, 2020
10 days agopepr1 plant elicitor peptide receptor1:
 
GRMZM2G011806
Poretsky, E et al. 2020. Plant J pp.doi: 10.1111/tpj.15022     Reference: October 15th, 2020
Gene Product: July 10th, 2019
Gene Model: October 15th, 2020
10 days agopepr2 plant elicitor peptide receptor2:
 
GRMZM2G428554
Poretsky, E et al. 2020. Plant J pp.doi: 10.1111/tpj.15022     Reference: October 15th, 2020
Gene Product: July 10th, 2019
Gene Model: October 15th, 2020
10 days agoapx12 ascorbate peroxidase12: NCBI: similar to Arabdopsis L-ascorbate peroxidase
5.05
   Qu, CX et al. 2020. Genes 11:1204     Reference: October 15th, 2020
Gene Product: October 15th, 2020
Variation: March 21st, 2017
10 days agodar2 monodehydroascorbate reductase2:
4.05
GRMZM2G134708
Sytykiewicz, H. 2016. Int J Mol Sci 17:268     Reference: October 15th, 2020
Gene Product: October 15th, 2020
Gene Model: April 16th, 2020
10 days agogsr2 glutathione reductase2:
5.08
GRMZM5G806449
Sytykiewicz, H. 2016. Int J Mol Sci 17:268     Reference: October 15th, 2020
Gene Product: September 1st, 2003
Gene Model: May 25th, 2020
10 days agocl29906_1  :
1.04
GRMZM2G057412
    Variation: September 25th, 2007
Gene Model: October 15th, 2020
11 days agots6 tasselseed6: Recessive alleles have more than two florets per spikelet, and reversed germ orientation. Dominant Ts6 tassels are compact, pistillate to mixed and ears have irregular kernel placement.
1.11
GRMZM5G862109
Yang, L et al. 2020. Euphytica 216:172     Reference: October 14th, 2020
Gene Product: July 5th, 2019
Variation: December 4th, 2013
Gene Model: July 14th, 2011
Recommended by George Chuck:
September 25th, 2007
11 days agoubi1 ubiquitin1: genomic sequence, 7 contiguous direct ubiquitin repeats; transcript specific probe; promoter active in monocots, not in tobacco
 
GRMZM2G409726
Wang, PH et al. 2020. Frontiers Plant Sci 11:570778     Reference: October 14th, 2020
Gene Product: September 1st, 2003
Variation: November 20th, 2014
Gene Model: November 18th, 2014
11 days agopin4 PIN-formed protein4: auxin efflux carriter similar to Arabidopsis PIN1 (Forestan et al 2012), but from PIN clade not found in all flowering plants save for the Brassicacease (O'Connor 2014 et al
4.08
GRMZM2G171702
Yang, L et al. 2020. Euphytica 216:172     Reference: October 14th, 2020
Gene Product: April 21st, 2014
Gene Model: January 24th, 2013
12 days agogrf9 growth-regulating factor9: NCBI: growth-regulating factor 9-like
5.08 - 5.08
GRMZM5G893117
Kong, JX et al. 2020. Frontiers Plant Sci 11:572319     Reference: October 13th, 2020
Variation: March 30th, 2017
Gene Model: March 30th, 2017
13 days agosig6 sigma-like factor6:
5.00
GRMZM2G144196
Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Gene Product: December 24th, 2019
Variation: June 24th, 2015
Gene Model: May 8th, 2015
Recommended by Ed Coe:
January 25th, 2007
13 days agomyb40 myb transcription factor40: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.04
GRMZM2G051256
Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Variation: February 18th, 2011
Gene Model: July 28th, 2016
13 days agomybr96 MYB-related-transcription factor 96: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.03
   Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Variation: September 25th, 2007
13 days agorap2 rap2.7 orthologue: negative regulator of flowering time; vgt1 acts as an enhancer (Salvi et al. 2007)
8.06
GRMZM2G700665
Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Gene Product: July 5th, 2019
Variation: July 24th, 2019
Gene Model: November 20th, 2012
13 days agomyb88 MYB-transcription factor 88: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.00
   Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Gene Product: July 25th, 2017
13 days agog2 golden plant2: (aka g5, pg14, v19, pg-m, bsd1) golden pale-green, weak plants; sheaths whitish yellow-green; pg-m (now g2-pg14::I) of Peterson is a mutable allele that responds to En; small bundle sheath plastids; SSR umc2101, umc2102, umc2103, umc2104, umc2105, umc2106, umc2107, umc2108.pale green seedling lethal, reduced Rubisco and NADP-malic enzyme, small bundle sheath plastids
3.00 - 3.01
GRMZM2G087804
Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Gene Product: July 11th, 2019
Variation: October 24th, 2017
Gene Model: August 30th, 2013
13 days agolg2 liguleless2: like lg1, less extreme
3.06
   Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Gene Product: August 22nd, 2014
Variation: August 20th, 2014
13 days agopep1 phosphoenolpyruvate carboxylase1: cytosolic C4 isozyme; single copy, similar to C3-PEPCase genes; cDNA complements E. coli mutant; genomic and partial amino acid sequences compare; SSR phi065
9.03
   Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Gene Product: September 1st, 2003
Variation: May 27th, 2020
13 days agossu1 ribulose bisphosphate carboxylase small subunit1: probed locus; SSRs phi092,phi093
4.08
   Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
13 days agossu2 ribulose bisphosphate carboxylase small subunit2: probed locus
2.05
GRMZM2G113033
Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Gene Product: September 1st, 2003
Variation: October 14th, 2014
Gene Model: August 7th, 2014
13 days agobzip40 bZIP-transcription factor 40: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.06
AC203957.3_FG004
Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Variation: September 1st, 2003
Gene Model: February 16th, 2018
13 days agomyb31 MYB31 transcription factor31: R2R3-MYB factor, regulates lignin genes
 
GRMZM2G050305
Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8   LOC_Os09g36730 (MSU/TIGR) Reference: October 12th, 2020
Gene Product: February 16th, 2011
Variation: May 6th, 2011
Gene Model: November 30th, 2015
13 days agobhlh43 bHLH-transcription factor 43: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.08
GRMZM2G165042
Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Variation: September 1st, 2003
Gene Model: July 6th, 2017
13 days agopdk1 pyruvate, orthophosphate dikinase1: cDNA, genomic and peptide sequences; microsatellite mapped (SSRs phi025, phi078, phi081; nc012 ); cytosolic or plastidic, dependent on transcript processingmutant seedlings are pale green and lethal once kernel reserves are exhaused, even when plants were grown under 2% CO2
6.05
GRMZM2G306345
Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Gene Product: July 28th, 2014
Variation: April 18th, 2018
Gene Model: November 21st, 2012
13 days agoereb102 AP2-EREBP-transcription factor 102: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to ethylene-responsive transcription factor RAP2-12 of A. thaliana
7.02
GRMZM2G052667
Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Variation: September 1st, 2003
Gene Model: September 6th, 2018
13 days agomyb37 MYB-transcription factor 37: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.01
GRMZM2G455869
Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Variation: September 1st, 2003
Gene Model: June 15th, 2018
13 days agocol13 C2C2-CO-like-transcription factor 13: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Gene Product: June 18th, 2018
13 days agocol2 C2C2-CO-like-transcription factor 2: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Gene Product: June 18th, 2018
13 days agocol3 C2C2-CO-like-transcription factor 3: Functions as a repressor of flowering
 
   Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Gene Product: June 18th, 2018
13 days agocol7 C2C2-CO-like-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Gene Product: June 18th, 2018
13 days agocol8 C2C2-CO-like-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Gene Product: June 18th, 2018
13 days agocchh133 Cys2His2 Zinc Finger133: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Gene Product: December 6th, 2019
13 days agomyb56 MYB-transcription factor 56: induced by drought and ABA treatments
 
   Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Gene Product: July 25th, 2017
13 days agonactf49 NAC-transcription factor 49: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Gene Product: July 8th, 2019
Variation: March 3rd, 2017
13 days agotcptf10 TCP-transcription factor 10: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Gene Product: September 27th, 2019
13 days agotcptf23 TCP-transcription factor 23: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Gene Product: September 27th, 2019
13 days agobhlh172 bHLH-transcription factor 172: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8   AT1G51070 (TAIR) Reference: October 12th, 2020
Gene Product: September 14th, 2016
13 days agomdh6 malate dehydrogenase6: mesophyll cells, C4 photosynthesis; a second copy may not function in photosynthesis
1.07
GRMZM2G129513
Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Gene Product: September 23rd, 2014
Variation: August 31st, 2010
Gene Model: October 24th, 2013
13 days agome3 NADP malic enzyme3: chloroplast C4-photosynthesis, delivers CO2 to ribulose bisphosphate carboylase
3.02
   Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Gene Product: June 27th, 2019
Variation: September 1st, 2003
13 days agohb84 Homeobox-transcription factor 84: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.NCBI:putative POX domain/homeobox DNA-binding domain family protein
1.06
GRMZM2G099319
Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Variation: December 30th, 2016
Gene Model: December 30th, 2016
13 days agocah2 carbonic anhydrase2: with cah1 promotes leaf CO2 availability for photosynthesis (Studer et al 2014)
 
GRMZM2G348512
Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Gene Product: February 26th, 2019
Variation: May 25th, 2018
Gene Model: July 31st, 2014
13 days agomybr17 MYB-related-transcription factor 17: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.09
GRMZM2G071977
Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Variation: September 1st, 2003
Gene Model: August 31st, 2018
13 days agoknox6 knotted related homeobox6: similar to knox2 in sequence and expression; cDNA and genomic clones; gene specific probe
5.04
GRMZM2G370332
Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Gene Product: September 1st, 2003
Variation: August 12th, 2014
Gene Model: August 12th, 2014
13 days agodof21 C2C2-Dof-transcription factor 21: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.02
GRMZM2G162749
Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Variation: January 6th, 2017
Gene Model: January 6th, 2017
13 days agohmg1 high mobility group protein1: cDNA sequence isolated by immunoscreening, homologous to vertebrate HMG1 family, single or low copy gene
5.03
   Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Gene Product: September 1st, 2003
Variation: July 26th, 2013
13 days agomyb38 myb transcription factor38: cDNA isolated by homology to C1, sequence distinct from C1
 
GRMZM2G084583
Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Gene Product: September 1st, 2003
Variation: October 20th, 2016
Gene Model: February 23rd, 2015
13 days agolhy1 late hypocotyl elongation protein ortholog1: myb transcription factor - core clock gene (Hayes et al. 2010)
10.03
GRMZM2G474769
Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Gene Product: July 31st, 2016
Variation: December 28th, 2016
Gene Model: December 28th, 2016
13 days agocah1 carbonic anhydrase1: C4 carbonic anhydrase; higher transcripts in mesophyll cells (Tausta 2014); double mutants with cah2 virutally remove this activity from leaf (Studer et al 2014).
 
GRMZM2G121878
Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Gene Product: February 26th, 2019
Variation: May 25th, 2018
Gene Model: July 31st, 2014
13 days agomab16 math-btb16:
 
GRMZM2G172210
Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Gene Product: June 6th, 2014
Variation: May 10th, 2017
Gene Model: February 14th, 2017
13 days agonactf23 NAC-transcription factor 23: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. similar to protein ATAF2 of A. thaliana
8.08
GRMZM2G068973
Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Variation: March 31st, 2005
Gene Model: June 14th, 2019
13 days agomybst1 single-repeat Myb protein1:
9.04
GRMZM2G034110
Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Gene Product: December 24th, 2015
Variation: January 26th, 2010
Gene Model: December 24th, 2015
13 days agoglk1 G2-like1: g2 golden2 paralog; specifically affects mesophyll chloroplast assembly, but not bundle sheath chloroplast assembly (Wang et al 2013)
9.00
GRMZM2G026833
Tu, XY et al. 2020. Nature communications pp.doi: 10.1038/s41467-020-18832-8     Reference: October 12th, 2020
Gene Product: July 11th, 2019
Variation: May 9th, 2009
Gene Model: September 27th, 2012
15 days agoomt2 Caffeoyl CoA O-methyltransferase2:
9.02
GRMZM2G099363
Murphree, C et al. 2020. Mol Plant Pathol pp.doi: 10.1111/mpp.12999     Reference: October 10th, 2020
Gene Product: January 5th, 2014
Variation: May 13th, 2016
Gene Model: September 17th, 2014
15 days agoAY110631  :
4.08
GRMZM2G439311
Murphree, C et al. 2020. Mol Plant Pathol pp.doi: 10.1111/mpp.12999     Reference: October 10th, 2020
Variation: July 29th, 2004
Gene Model: April 17th, 2018
15 days agohct1 hydroxycinnamoyltransferase1: up-regulated in the Rp1-D21 mutant lines; colocalized with the SNP associated with Rp1-D21-induced HR
 
GRMZM2G061806
Murphree, C et al. 2020. Mol Plant Pathol pp.doi: 10.1111/mpp.12999     Reference: October 10th, 2020
Gene Product: November 7th, 2015
Gene Model: November 7th, 2015
15 days agocybc7 cytochrome b-c1 complex subunit 7: encodes an important part of the mitochondrial electron transport chain that can suppress HR mediated by Rp1-D21 in a transient expression assay
 
GRMZM2G318346
Murphree, C et al. 2020. Mol Plant Pathol pp.doi: 10.1111/mpp.12999     Reference: October 10th, 2020
Gene Product: January 30th, 2019
Variation: January 30th, 2019
Gene Model: January 30th, 2019
15 days agopgh1 polygalacturonase gene homolog1: functions as a suppressor of programmed cell death induced by at least two autoactive NLR proteins and by two chemical inducers
 
GRMZM2G135763
Murphree, C et al. 2020. Mol Plant Pathol pp.doi: 10.1111/mpp.12999     Reference: October 10th, 2020
Gene Product: September 1st, 2003
Variation: July 15th, 2019
Gene Model: July 15th, 2019
15 days agohsp13 heat shock protein13:
 
GRMZM2G012631
Murphree, C et al. 2020. Mol Plant Pathol pp.doi: 10.1111/mpp.12999     Reference: October 10th, 2020
Gene Product: January 14th, 2019
Gene Model: October 10th, 2020
15 days agopk5 protein kinase5:
 
GRMZM2G144042
Murphree, C et al. 2020. Mol Plant Pathol pp.doi: 10.1111/mpp.12999     Reference: October 10th, 2020
Gene Product: January 14th, 2019
Gene Model: October 10th, 2020
15 days agoGRMZM2G351387  :
 
GRMZM2G351387
Murphree, C et al. 2020. Mol Plant Pathol pp.doi: 10.1111/mpp.12999     Reference: October 10th, 2020
Gene Product: January 14th, 2019
Gene Model: October 10th, 2020
15 days agoIDP343  : similar to vacuolar protein-sorting-associated protein 37-1 of A. thaliana
1.02
GRMZM2G023575
Murphree, C et al. 2020. Mol Plant Pathol pp.doi: 10.1111/mpp.12999     Reference: October 10th, 2020
Variation: March 31st, 2005
Gene Model: February 11th, 2019
15 days agosrph1 SGT1 disease resistance protein homolog1: interacts with RACK1 protein involved in disease resistance (Wang et al 2014)
3.09
GRMZM2G105019
Murphree, C et al. 2020. Mol Plant Pathol pp.doi: 10.1111/mpp.12999     Reference: October 10th, 2020
Variation: March 31st, 2005
Gene Model: March 23rd, 2015
15 days agopk3 S-domain class receptor-like kinase3:
7.03
GRMZM2G309025
Zhang, R et al. 1999. Plant Physiol 121: 685-686     Reference: October 24th, 2006
Gene Product: October 10th, 2020
Variation: May 12th, 2005
Gene Model: August 5th, 2015
16 days agoskus9 skewed root growth similar9: Similar to Monocopper oxidase-like protein SKU5 of Arabidopsis C-terminal peptide-binding protein 1
1.07
GRMZM2G438386
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: October 9th, 2020
Variation: September 28th, 2016
Gene Model: September 28th, 2016
16 days agolac2 laccase2:
6.05
GRMZM2G146152
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: August 28th, 2018
16 days agolac10 laccase10:
 
GRMZM2G140527
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: May 6th, 2016
16 days agolac9 laccase9:
 
GRMZM2G132169
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: September 28th, 2016
16 days agolac3 laccase3:
 
GRMZM2G169033
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: March 31st, 2018
16 days agolac5 laccase5:
 
GRMZM2G367668
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: March 31st, 2018
16 days agolac4 laccase4:
 
GRMZM2G072780
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: March 31st, 2018
16 days agolac1 laccase1:
 
GRMZM2G400390
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: March 31st, 2018
16 days agolac11 laccase11:
 
GRMZM2G305526
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
16 days agolac12 laccase12:
 
GRMZM5G814718
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
16 days agolac13 laccase13:
 
GRMZM2G166857
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
16 days agolac14 laccase14:
 
AC234190.1_FG002
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
16 days agolac15 laccase15:
 
GRMZM2G072808
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
16 days agolac16 laccase16:
 
GRMZM5G870184
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
16 days agolac17 laccase17:
 
GRMZM2G309594
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
16 days agolac18 laccase18:
 
GRMZM2G388587
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
16 days agolac19 laccase19:
 
GRMZM2G320786
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
16 days agolac20 laccase20:
 
GRMZM5G800488
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
16 days agolac21 laccase21:
 
GRMZM2G447271
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
16 days agolac22 laccase22:
 
GRMZM2G336337
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
16 days agolac23 laccase23:
 
GRMZM2G094375
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
16 days agolac7 laccase7:
 
GRMZM2G400390
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: March 31st, 2018
Gene Model: March 16th, 2020
16 days agoskus2 skewed root growth similar2: closest paralog to skus1 (92.31% similar)
 
GRMZM2G068682
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: October 9th, 2020
Gene Model: October 9th, 2020
16 days agoskus3 skewed root growth similar3: 74.77% similar to skus1
 
GRMZM2G129064
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: October 9th, 2020
Gene Model: October 9th, 2020
16 days agoskus4 skewed root growth similar4: 73.10% similar to skus1
 
GRMZM2G142584
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: October 9th, 2020
Gene Model: October 9th, 2020
16 days agoskus6 skewed root growth similar6: 52.76% similar to skus1
 
GRMZM2G076225
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: October 9th, 2020
Gene Model: October 9th, 2020
16 days agoskus7 skewed root growth similar7: 52.35% similar to skus1
 
GRMZM2G416509
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: October 9th, 2020
Gene Model: October 9th, 2020
16 days agoskus8 skewed root growth similar8: 47.29% similar to skus1
 
GRMZM2G360529
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: October 9th, 2020
Gene Model: October 9th, 2020
16 days agoskus10 skewed root growth similar10: 46.77% similar to skus1
 
GRMZM2G077317
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: October 9th, 2020
Gene Model: October 9th, 2020
16 days agoskus11 skewed root growth similar11: 46.20% similar to skus1
 
GRMZM2G402584
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: October 9th, 2020
Gene Model: October 9th, 2020
16 days agoskus12 skewed root growth similar12: 46.14% similar to skus1
 
GRMZM2G049693
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: October 9th, 2020
Gene Model: October 9th, 2020
16 days agoskus13 skewed root growth similar13: 46.00% similar to skus1
 
GRMZM2G043301
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: October 9th, 2020
Gene Model: October 9th, 2020
16 days agoskus14 skewed root growth similar14: 45.64% similar to skus1
 
GRMZM2G172642
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: October 9th, 2020
Gene Model: October 9th, 2020
16 days agoskus15 skewed root growth similar15: 29.87% similar to skus1
 
GRMZM2G064106
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: October 9th, 2020
Gene Model: October 9th, 2020
16 days agoskus16 skewed root growth similar16: 28.72% similar to skus1
 
GRMZM2G386170
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: October 9th, 2020
Gene Model: October 9th, 2020
16 days agoskus17 skewed root growth similar17: 28.26% similar to skus1
 
GRMZM2G163535
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: October 9th, 2020
Gene Model: October 9th, 2020
16 days agoskus18 skewed root growth similar18: 26.63% similar to skus1
 
GRMZM2G141376
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: October 9th, 2020
Gene Model: October 9th, 2020
16 days agoskus1 skewed root growth similar1: mutant produced small, shriveled kernels with an aberrant basal endosperm transfer layer (BETL) and placento‐chalazal (PC) layer and irregular starch granules
3.06
GRMZM2G157929
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: May 29th, 2019
Variation: October 9th, 2020
Gene Model: September 28th, 2020
16 days agoskus5 skewed root growth similar5: 52.77% similar to skus1
5.04
GRMZM2G076985
Zhang, K et al. 2020. New Phytol pp.doi: 10.1111/nph.16988     Reference: October 9th, 2020
Gene Product: October 9th, 2020
Gene Model: May 9th, 2020
17 days agomsl2 mechanosensitive channel of small conductance-like2: Class I MSL; found to be localized either in mitochondrial membrane or plastid envelop and show sequence similarity with MscS channels of bacteria
2.02
   Kaur, A et al. 2020. Sci. Rep. 10:227     Reference: October 8th, 2020
Gene Product: October 8th, 2020
Variation: November 16th, 2017
17 days agoemb5 embryo specific5: (was emb*-8518) embryo development blocked at transition to early coleoptilar stage
2.08 - 2.09
   Li, Y et al. 2020. Plant Mol Biol Rep pp.doi: 10.1007/s11105-020-01251-w     Reference: October 8th, 2020
Variation: September 1st, 2003
17 days agomsl1 mechanosensitive channel of small conductance-like1: Class I MSL; found to be localized either in mitochondrial membrane or plastid envelop and show sequence similarity with MscS channels of bacteria
 
GRMZM2G028914
Kaur, A et al. 2020. Sci. Rep. 10:227     Reference: October 8th, 2020
Gene Product: October 8th, 2020
Gene Model: October 8th, 2020
17 days agomsl3 mechanosensitive channel of small conductance-like3: Class II MSL; predicted to be present in the plasma membrane
 
GRMZM2G027891
Kaur, A et al. 2020. Sci. Rep. 10:227     Reference: October 8th, 2020
Gene Product: October 8th, 2020
Gene Model: October 8th, 2020
17 days agomsl4 mechanosensitive channel of small conductance-like4: Class II MSL; predicted to be present in the plasma membrane
 
GRMZM2G303244
Kaur, A et al. 2020. Sci. Rep. 10:227     Reference: October 8th, 2020
Gene Product: October 8th, 2020
Gene Model: October 8th, 2020
17 days agomsl5 mechanosensitive channel of small conductance-like5: Class II MSL; predicted to be present in the plasma membrane
 
GRMZM2G005996
Kaur, A et al. 2020. Sci. Rep. 10:227     Reference: October 8th, 2020
Gene Product: October 8th, 2020
Gene Model: October 8th, 2020
17 days agomsl6 mechanosensitive channel of small conductance-like6: Class II MSL; predicted to be present in the plasma membrane
 
AY530952.1_FG001
Kaur, A et al. 2020. Sci. Rep. 10:227     Reference: October 8th, 2020
Gene Product: October 8th, 2020
Gene Model: October 8th, 2020
17 days agomsl7 mechanosensitive channel of small conductance-like7: Class II MSL; predicted to be present in the plasma membrane
 
GRMZM2G005013
Kaur, A et al. 2020. Sci. Rep. 10:227     Reference: October 8th, 2020
Gene Product: October 8th, 2020
Gene Model: October 8th, 2020
17 days agomsl8 mechanosensitive channel of small conductance-like8: Class II MSL; predicted to be present in the plasma membrane
 
GRMZM2G090627
Kaur, A et al. 2020. Sci. Rep. 10:227     Reference: October 8th, 2020
Gene Product: October 8th, 2020
Gene Model: October 8th, 2020
18 days agoals2 acetolactate synthase2: sensitive to imidazolinone herbicides; acetohydroxyacid synthase has altered herbicide inhibition kineticsSecond band mapped to this site. Acetolactate pyruvate-lyase from tobacco used as the dup(als2) probe
5.04
GRMZM2G143008
Jiang, Y-Y et al. 2020. Genome Biol 21:257     Reference: October 7th, 2020
Gene Product: September 1st, 2003
Variation: October 7th, 2020
Gene Model: July 27th, 2016
18 days agoals1 acetolactate synthase1: sensitive to imidazolinone herbicides; acetohydroxyacid synthase has altered herbicide inhibition kinetics
4.05
   Jiang, Y-Y et al. 2020. Genome Biol 21:257     Reference: October 7th, 2020
Gene Product: September 1st, 2003
Variation: October 7th, 2020
19 days agolox3 lipoxygenase3:
3.06
   Yang, YT et al. 2020. Biotect Biotech Equip 34:.doi: 10.1080/13102818.2020.1827981     Reference: October 6th, 2020
Gene Product: January 3rd, 2018
Variation: November 14th, 2014
19 days agornrs3 ribonucleotide reductase small subunit3: similar to Ribonucleoside-diphosphate reductase small chain C of A. thaliana
2.04
GRMZM2G323679
Xie, SY et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00219     Reference: October 6th, 2020
Gene Product: October 6th, 2020
Gene Model: February 19th, 2019
19 days agopebp15 phosphatidylethanolamine-binding protein15:
 
   Yang, YT et al. 2020. Biotect Biotech Equip 34:.doi: 10.1080/13102818.2020.1827981     Reference: October 6th, 2020
Variation: December 15th, 2010
19 days agoglb1 globulin1: was prot1; electrophoretic mobility, null allele is known; embryo protein; SSRs phi011, 055, 094
1.09
   Yang, YT et al. 2020. Biotect Biotech Equip 34:.doi: 10.1080/13102818.2020.1827981     Reference: October 6th, 2020
Gene Product: September 1st, 2003
Variation: January 29th, 2015
19 days agosh1 shrunken1: inflated endosperm collapses on drying, forming smoothly indented kernels; sucrose synthase-sh1 of endosperm (compare sus1 and sus2); homotetramer; SSRs phi028, 044, 033
9.01
   Yang, YT et al. 2020. Biotect Biotech Equip 34:.doi: 10.1080/13102818.2020.1827981     Reference: October 6th, 2020
Gene Product: October 25th, 2006
Variation: June 9th, 2020
19 days agosalt1 SalT homolog1: gene transcript associated with vascular cells localized around phloem cells; function unknown;
10.02
GRMZM2G142891
Yang, YT et al. 2020. Biotect Biotech Equip 34:.doi: 10.1080/13102818.2020.1827981     Reference: October 6th, 2020
Gene Product: September 1st, 2003
Variation: January 9th, 2018
Gene Model: December 12th, 2017
19 days agoumc1346  :
4.05
GRMZM2G366392
Jagtap, AB et al. 2020. Int J Mol Sci pp.DOI: 10.3390/ijms21197386     Reference: October 6th, 2020
Variation: September 1st, 2003
Gene Model: June 7th, 2018
19 days agoumc1742  :
3.04
GRMZM2G114552
Yang, YT et al. 2020. Biotect Biotech Equip 34:.doi: 10.1080/13102818.2020.1827981     Reference: October 6th, 2020
Variation: September 1st, 2003
Gene Model: April 2nd, 2018
19 days agopho1 starch phosphorylase1: amyloplast starch phosphorylase
1.10
GRMZM2G074158
Yang, YT et al. 2020. Biotect Biotech Equip 34:.doi: 10.1080/13102818.2020.1827981     Reference: October 6th, 2020
Gene Product: March 26th, 2015
Gene Model: March 26th, 2015
19 days agonip2c NOD26-like membrane intrinsic protein2:
9.01
GRMZM2G081239
Jagtap, AB et al. 2020. Int J Mol Sci pp.DOI: 10.3390/ijms21197386     Reference: October 6th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: June 3rd, 2015
19 days agohsp18a 18 kda heat shock protein18a: induced by heat shock specifically in anthers or spikelets containing meitotic microsporocytes
9.04 - 9.05
GRMZM5G899188
Yang, YT et al. 2020. Biotect Biotech Equip 34:.doi: 10.1080/13102818.2020.1827981     Reference: October 6th, 2020
Gene Product: September 1st, 2003
Variation: June 27th, 2014
Gene Model: June 27th, 2014
19 days agofht2 flavanone 3-hydroxylase2:
1.04
GRMZM2G382569
Yang, YT et al. 2020. Biotect Biotech Equip 34:.doi: 10.1080/13102818.2020.1827981     Reference: October 6th, 2020
Gene Product: June 8th, 2012
Gene Model: June 7th, 2017
19 days agobrs1 brassinosteroid synthesis1:
1.03
GRMZM2G065635
Jagtap, AB et al. 2020. Int J Mol Sci pp.DOI: 10.3390/ijms21197386   AT3G50660 (TAIR) Reference: October 6th, 2020
Gene Product: September 20th, 2010
Variation: November 7th, 2013
Gene Model: October 3rd, 2012
19 days agoipt2 isopentenyl transferase2: encodes an isopentenyl transferase
 
GRMZM2G084462
Yang, YT et al. 2020. Biotect Biotech Equip 34:.doi: 10.1080/13102818.2020.1827981     Reference: October 6th, 2020
Gene Product: March 19th, 2014
Variation: July 11th, 2013
Gene Model: July 10th, 2013
19 days agorca3 RUBISCO activase3: encodes alpha form of RUBISCO activase
 
GRMZM2G162200
Jagtap, AB et al. 2020. Int J Mol Sci pp.DOI: 10.3390/ijms21197386     Reference: October 6th, 2020
Gene Product: October 28th, 2014
Gene Model: February 11th, 2014
19 days agoubi3 ubiquitin3: candidate gene for major plant and ear height QTL
 
GRMZM2G014119
Chen, SY et al. 2020. BMC Genomics 21:689   AT1G31340 (TAIR) Reference: October 6th, 2020
Gene Product: September 1st, 2003
Gene Model: December 28th, 2016
19 days agompkl1 MAP kinase-like1: encodes a functional kinase that mediates the response of maize seedlings to drought by regulating ABA homeostasis
 
GRMZM2G108829
Jagtap, AB et al. 2020. Int J Mol Sci pp.DOI: 10.3390/ijms21197386     Reference: October 6th, 2020
Gene Product: May 13th, 2014
Variation: December 21st, 2019
Gene Model: December 21st, 2019
19 days agornrs1 ribonucleotide reductase small subunit1:
 
GRMZM2G060163
Xie, SY et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00219     Reference: October 6th, 2020
Gene Product: October 6th, 2020
Gene Model: October 6th, 2020
19 days agornrl2 ribonucleotide reductase large subunit2:
 
GRMZM2G340527
Xie, SY et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00219     Reference: October 6th, 2020
Gene Product: October 6th, 2020
Gene Model: October 6th, 2020
19 days agornrs2 ribonucleotide reductase small subunit2:
 
GRMZM2G155546
Xie, SY et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00219     Reference: October 6th, 2020
Gene Product: October 6th, 2020
Gene Model: October 6th, 2020
19 days agornrl1 ribonucleotide reductase large subunit1: mutant has a thermosensitive vanishing tassel phenotype
 
GRMZM2G304362
Xie, SY et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00219     Reference: October 6th, 2020
Gene Product: October 6th, 2020
Variation: October 6th, 2020
Gene Model: October 6th, 2020
19 days agoIDP49  :
3.05
GRMZM2G136262
Jagtap, AB et al. 2020. Int J Mol Sci pp.DOI: 10.3390/ijms21197386     Reference: October 6th, 2020
Variation: March 31st, 2005
Gene Model: February 24th, 2019
19 days agobetl9 basal endosperm transfer layer9: endosperm transfer cell specific protein regulated by mrp1 myb related protein1; RFLP gpm92
3.05
GRMZM2G087413
Yang, YT et al. 2020. Biotect Biotech Equip 34:.doi: 10.1080/13102818.2020.1827981     Reference: October 6th, 2020
Gene Product: September 1st, 2003
Variation: October 8th, 2009
Gene Model: July 4th, 2014
19 days agocol15 C2C2-CO-like-transcription factor 1:
1.04
GRMZM2G134671
Jagtap, AB et al. 2020. Int J Mol Sci pp.DOI: 10.3390/ijms21197386     Reference: October 6th, 2020
Gene Product: June 18th, 2018
Gene Model: June 16th, 2018
19 days agopsei8 cystatin8:
1.04
GRMZM2G401374
Yang, YT et al. 2020. Biotect Biotech Equip 34:.doi: 10.1080/13102818.2020.1827981     Reference: October 6th, 2020
Gene Product: April 21st, 2008
Variation: April 21st, 2008
Gene Model: July 28th, 2016
19 days agofps1 farnesyl pyrophosphate synthase1: endosperm cDNA sequence; two copies detected; up-regulated in endosperm mutants, o2 and fl2 (Li et al. 1996).
8.03
GRMZM2G168681
Yang, YT et al. 2020. Biotect Biotech Equip 34:.doi: 10.1080/13102818.2020.1827981     Reference: October 6th, 2020
Gene Product: August 18th, 2015
Variation: May 9th, 2009
Gene Model: April 8th, 2013
20 days agoptf1 Pi starvation-induced transcription factor1: single copy, may be involved in regulating carbohydrate metabolism
9.01 - 9.02
GRMZM2G024530
Wang, QJ et al. 2019. Plant Genome 12:190039   LOC_Os02g35660 (MSU/TIGR)
Os02g0564700 (Gramene)
Reference: October 5th, 2020
Gene Product: September 14th, 2016
Variation: April 23rd, 2011
Gene Model: April 19th, 2011
Recommended by Maria Katherine Mejia-Guerra:
April 18th, 2011
20 days agoms6021 male sterile6021: mutants are male sterile; encodes a fatty-acyl-CoA reductase
9.04 - 9.06
GRMZM2G120987
Zhang, HS et al. 2020. Plant Genome 13:e20022     Reference: October 5th, 2020
Gene Product: December 1st, 2017
Variation: December 1st, 2017
Gene Model: December 1st, 2017
20 days agoms26 male sterile26: tapetal cells abnormal, die early; microspores vacuolate early and abort after the tetrad stage
1.02 - 1.02
   Zhang, HS et al. 2020. Plant Genome 13:e20022     Reference: October 5th, 2020
Gene Product: September 30th, 2013
Variation: July 8th, 2020
20 days agoms10 male sterile10: like ms5; affected at microspore vacuolationsimilar to Arabidopsis cytochrome P450, family 703, subfamily A, polypeptide 2
10.04 - 10.05
GRMZM5G830329
Zhang, HS et al. 2020. Plant Genome 13:e20022   AT1G01280 (TAIR)
LOC_Os08g03682 (MSU/TIGR)
Reference: October 5th, 2020
Gene Product: January 20th, 2017
Variation: January 19th, 2017
Gene Model: January 19th, 2017
20 days agorf2 restorer of fertility2: see rf1; cDNA prf2a complements E. coli mutant deficient in aldehyde dehydrogenase; mitochondrial
9.03
   Zhang, HS et al. 2020. Plant Genome 13:e20022     Reference: October 5th, 2020
Gene Product: September 1st, 2003
Variation: December 18th, 2006
20 days agorps27c ribosomal protein S27c:
5.01
GRMZM2G132121
Zhang, HS et al. 2020. Plant Genome 13:e20022     Reference: October 5th, 2020
Variation: March 14th, 2015
Gene Model: March 14th, 2015
20 days agoumc1367  :
10.03
GRMZM2G037378
Wang, QJ et al. 2019. Plant Genome 12:190039     Reference: October 5th, 2020
Variation: September 1st, 2003
Gene Model: December 13th, 2017
20 days agoumc1509  : NCBI: similar to Arabidopsis PATATIN-like protein 5
4.02
GRMZM2G154523
Zhang, HS et al. 2020. Plant Genome 13:e20022     Reference: October 5th, 2020
Variation: May 16th, 2017
Gene Model: May 16th, 2017
20 days agoumc1597  :
5.03
GRMZM2G124791
Zhang, HS et al. 2020. Plant Genome 13:e20022     Reference: October 5th, 2020
Variation: September 1st, 2003
Gene Model: June 19th, 2018
20 days agorh4 RNA helicase4: Chloroplast Dead box family RNA helicase. Promotes chloroplast group II intron splicing and assembly of the 50S ribosomal subunit. Associates in vivo with pre-50S ribosomal subunits and with a subset of group II introns. (A. Barkan, 2015)cp Dead box RNA helicase involved in cp intron splicing and assembly of the 50S ribosomal subunit
 
AC198418.3_FG005
Zhang, HS et al. 2020. Plant Genome 13:e20022   At5g26742 (TAIR)
LOC_Os03g61220 (MSU/TIGR)
Os03g0827700 (Gramene)
Reference: October 5th, 2020
Gene Product: May 17th, 2012
Variation: December 30th, 2015
Gene Model: May 17th, 2012
20 days agoglct1 glucose translocator1:
8.02
GRMZM2G153704
Zhang, HS et al. 2020. Plant Genome 13:e20022     Reference: October 5th, 2020
Gene Product: September 1st, 2003
Variation: May 30th, 2014
Gene Model: August 23rd, 2014
20 days agopdi1 protein disulfide isomerase1: single copy cDNA, SSR umc1550
4.03
GRMZM2G091481
Zhang, HS et al. 2020. Plant Genome 13:e20022     Reference: October 5th, 2020
Gene Product: September 1st, 2003
Variation: December 23rd, 2015
Gene Model: October 23rd, 2013
20 days agocmu1 chorismate mutase1: function largely predicted; protein heterodimerizes with fungal chorismate mutase
8.08
GRMZM2G116087
Zhang, HS et al. 2020. Plant Genome 13:e20022     Reference: October 5th, 2020
Gene Product: February 12th, 2014
Gene Model: February 12th, 2014
20 days agopdi6 protein disulfide isomerase6:
3.04
GRMZM2G128171
Zhang, HS et al. 2020. Plant Genome 13:e20022     Reference: October 5th, 2020
Gene Product: September 1st, 2003
Variation: December 30th, 2015
Gene Model: December 18th, 2015
20 days agopdi7 protein disulfide isomerase7:
6.05
GRMZM2G159369
Zhang, HS et al. 2020. Plant Genome 13:e20022     Reference: October 5th, 2020
Gene Product: September 1st, 2003
Variation: January 7th, 2016
Gene Model: December 18th, 2015
20 days agoalt7 alanine aminotransferase7: bundle sheath alanine transasminase; see also alt8, alt9
7.00
GRMZM2G120563
Zhang, HS et al. 2020. Plant Genome 13:e20022     Reference: October 5th, 2020
Gene Product: October 2nd, 2020
Gene Model: September 4th, 2018
20 days agoaox2 alternative oxidase2: primers give PCR product closely similar to alternative oxidase in other species
 
GRMZM2G125669
Zhang, HS et al. 2020. Plant Genome 13:e20022     Reference: October 5th, 2020
Gene Product: February 22nd, 2012
Variation: March 1st, 2012
Gene Model: February 17th, 2012
20 days agophos2 phosphate transporter2:
 
GRMZM2G466545
Wang, QJ et al. 2019. Plant Genome 12:190039   AT3G23430 (TAIR) Reference: October 5th, 2020
Gene Product: February 27th, 2016
Variation: February 27th, 2016
Gene Model: February 27th, 2016
20 days agohak22 potassium high-affinity transporter22:
 
GRMZM2G409771
Wang, QJ et al. 2019. Plant Genome 12:190039     Reference: October 5th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
20 days agotk1 transketolase 1:
9.03
GRMZM2G033208
Zhang, HS et al. 2020. Plant Genome 13:e20022     Reference: October 5th, 2020
Gene Product: March 11th, 2008
Variation: January 29th, 2011
Gene Model: December 21st, 2015
22 days agoakin2 AKINbetagamma-1 protein kinase2:
1.03
   Paul, MJ et al. 2020. Biochem Soc Trans pp.doi: 10.1042/BST20200286     Reference: October 3rd, 2020
Gene Product: December 31st, 2018
Variation: September 25th, 2007
22 days agotrps2 trehalose-6-phosphate synthase2:
1.03
GRMZM2G099860
Zhou, ML et al. 2014. J Plant Growth Reg 33:256-271     Reference: June 26th, 2014
Gene Product: October 3rd, 2020
Gene Model: February 11th, 2019
22 days agora3 ramosa3: branched inflorescence; mutant ears have abnormal long branches at their bases; trehalose biosynthesis
7.06
   Paul, MJ et al. 2020. Biochem Soc Trans pp.doi: 10.1042/BST20200286     Reference: October 3rd, 2020
Gene Product: October 3rd, 2020
Variation: December 3rd, 2010
22 days agotb1 teosinte branched1: many tillers; ear branches tassel-like; affects apical dominanceGRASSIUS: TCP transcription factor (TCP1)
1.09
   Paul, MJ et al. 2020. Biochem Soc Trans pp.doi: 10.1042/BST20200286     Reference: October 3rd, 2020
Gene Product: September 14th, 2016
Variation: February 2nd, 2017
22 days agovp5 viviparous5: like vp2cDNA, strongest hybridization to this site; other sites are near o2, bnl17.25 and dup103; encodes a 2-step phytoene desaturase; SSR umc1070
1.02 - 1.02
   Gentzel, IN et al. 2020. Plant Methods 16:133     Reference: October 3rd, 2020
Gene Product: December 13th, 2011
Variation: March 4th, 2014
22 days agohb71 Homeobox-transcription factor 71: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Fang, P et al. 2020. Plant Mol Biol Rep pp.doi: 10.1007/s11105-020-01252-9     Reference: October 3rd, 2020
Gene Product: October 3rd, 2020
22 days agotrpp4 trehalose-6-phosphate phosphatase4: double mutants with ra3 give a more extreme phenotype
4.08
GRMZM2G151044
Paul, MJ et al. 2020. Biochem Soc Trans pp.doi: 10.1042/BST20200286     Reference: October 3rd, 2020
Gene Product: October 3rd, 2020
Variation: April 2nd, 2019
Gene Model: June 7th, 2018
22 days agohb91 Homeobox-transcription factor 91: Tests with B-A translocations indicated that this probe did not map to chromosomes 4L or 6L.NCBI: Homeodomain leucine zipper family IV proteinLocus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
10.07
GRMZM2G122897
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: October 3rd, 2020
Variation: April 25th, 2017
Gene Model: April 25th, 2017
22 days agotrpp11 trehalose-6-phosphate phosphatase11:
9.01
GRMZM2G080354
Figueroa, D; Bass, HW. 2012. Cell Chromosome Res. 20:363-80     Reference: July 18th, 2014
Gene Product: October 3rd, 2020
Variation: September 1st, 2003
Gene Model: March 2nd, 2018
22 days agotrps1 trehalose-6-phosphate synthase1:
 
GRMZM2G068943
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: October 3rd, 2020
Gene Model: May 28th, 2012
22 days agotre1 trehalase1:
 
GRMZM2G162690
Paul, MJ et al. 2020. Biochem Soc Trans pp.doi: 10.1042/BST20200286     Reference: October 3rd, 2020
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
22 days agotrpp1 trehalose-6-phosphate phosphatase1: similar to haloacid dehalogenase-like hydrolase domain-containing protein of A. thaliana
 
GRMZM2G347280
Paul, MJ et al. 2020. Biochem Soc Trans pp.doi: 10.1042/BST20200286     Reference: October 3rd, 2020
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
22 days agotrpp2 trehalose-6-phosphate phosphatase2:
 
GRMZM2G140078
Oszvald, M et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.17.01673     Reference: February 7th, 2018
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
22 days agotrpp3 trehalose-6-phosphate phosphatase3:
 
GRMZM2G117564
Zhou, ML et al. 2014. J Plant Growth Reg 33:256-271     Reference: June 26th, 2014
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
22 days agotrpp5 trehalose-6-phosphate phosphatase5:
 
GRMZM2G059840
Zhou, ML et al. 2014. J Plant Growth Reg 33:256-271     Reference: June 26th, 2014
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
22 days agotrpp7 trehalose-6-phosphate phosphatase7:
 
GRMZM2G055150
Oszvald, M et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.17.01673     Reference: February 7th, 2018
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
22 days agotrpp8 trehalose-6-phosphate phosphatase8:
 
GRMZM2G174396
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
22 days agotrpp9 trehalose-6-phosphate phosphatase9:
 
GRMZM5G840145
Zhou, ML et al. 2014. J Plant Growth Reg 33:256-271     Reference: June 26th, 2014
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
22 days agotrpp12 trehalose-6-phosphate phosphatase12:
 
GRMZM2G178546
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
22 days agotrps3 trehalose-6-phosphate synthase3:
 
GRMZM2G079928
Paul, MJ et al. 2020. Biochem Soc Trans pp.doi: 10.1042/BST20200286     Reference: October 3rd, 2020
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
22 days agotrps4 trehalose-6-phosphate synthase4:
 
GRMZM2G008226
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
22 days agotrps5 trehalose-6-phosphate synthase5:
 
GRMZM2G527891
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
22 days agotrps6 trehalose-6-phosphate synthase6:
 
GRMZM2G304274
Acosta-Perez, P et al. 2020. Plants 9:315     Reference: March 3rd, 2020
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
22 days agotrps7 trehalose-6-phosphate synthase7:
 
GRMZM2G123277
Paul, MJ et al. 2020. Biochem Soc Trans pp.doi: 10.1042/BST20200286     Reference: October 3rd, 2020
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
22 days agotrps8 trehalose-6-phosphate synthase8: similar to alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 of A. thaliana
 
GRMZM2G007736
Zhou, ML et al. 2014. J Plant Growth Reg 33:256-271     Reference: June 26th, 2014
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
22 days agotrps9 trehalose-6-phosphate synthase9:
 
GRMZM2G366659
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
22 days agotrps10 trehalose-6-phosphate synthase10:
 
GRMZM2G312521
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
22 days agotrps11 trehalose-6-phosphate synthase11:
 
GRMZM2G122231
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
22 days agotrps12 trehalose-6-phosphate synthase12: similar to alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 of A. thaliana
 
GRMZM2G133966
Zhou, ML et al. 2014. J Plant Growth Reg 33:256-271     Reference: June 26th, 2014
Gene Product: October 3rd, 2020
Gene Model: March 19th, 2019
22 days agotrps13 trehalose-6-phosphate synthase13:
 
GRMZM2G019183
Paul, MJ et al. 2020. Biochem Soc Trans pp.doi: 10.1042/BST20200286     Reference: October 3rd, 2020
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
22 days agotrps14 trehalose-6-phosphate synthase14:
 
GRMZM2G416836
Zhou, ML et al. 2014. J Plant Growth Reg 33:256-271     Reference: June 26th, 2014
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
22 days agotrps15 trehalose-6-phosphate synthase15:
 
GRMZM2G118462
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: October 3rd, 2020
Gene Model: September 15th, 2013
22 days agosnrk1a2 SNF1-related kinase alpha1-like2:
 
GRMZM2G180704
Paul, MJ et al. 2020. Biochem Soc Trans pp.doi: 10.1042/BST20200286     Reference: October 3rd, 2020
Gene Product: December 31st, 2018
Gene Model: February 13th, 2014
22 days agotrpp13 trehalose-6-phosphate phosphatase13:
 
GRMZM5G890599
Claeys, H, et al. 2019. Nature Plants. 0:doi: 10.1038/s41477-019-0394-z     Reference: June 1st, 2019
Gene Product: October 3rd, 2020
Gene Model: April 2nd, 2019
22 days agotrpp14 trehalose-6-phosphate phosphatase14:
 
   Claeys, H, et al. 2019. Nature Plants. 0:doi: 10.1038/s41477-019-0394-z     Reference: June 1st, 2019
Gene Product: October 3rd, 2020
22 days agotrpp6 trehalose-6-phosphate phosphatase6: similar to Arabidopsis haloacid dehalogenase-like hydrolase domain-containing protein
5.06
GRMZM2G112830
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: October 3rd, 2020
Gene Model: February 7th, 2018
22 days agosnrk1a1 SNF1-related kinase alpha1-like1:
6.06
GRMZM2G077278
Paul, MJ et al. 2020. Biochem Soc Trans pp.doi: 10.1042/BST20200286     Reference: October 3rd, 2020
Gene Product: December 31st, 2018
Gene Model: February 7th, 2018
23 days agoarftf9 ARF-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.04
   Saidi, A; Hajibarat, Z. 2020. Notulae Scientia Biologicae 12:646-657     Reference: October 2nd, 2020
Variation: September 25th, 2007
23 days agoarftf25 ARF-transcription factor 25: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.06
GRMZM2G116557
Saidi, A; Hajibarat, Z. 2020. Notulae Scientia Biologicae 12:646-657     Reference: October 2nd, 2020
Variation: August 22nd, 2017
Gene Model: August 22nd, 2017
23 days agoarftf18 ARF-transcription factor 18: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.03
GRMZM2G035405
Saidi, A; Hajibarat, Z. 2020. Notulae Scientia Biologicae 12:646-657     Reference: October 2nd, 2020
Variation: September 1st, 2003
Gene Model: June 23rd, 2018
23 days agoalt1 L-alanine:2-oxoglutarate aminotransferase1: electrophoretic mobility; alt1 and alt2 interact to form heterodimers
 
   Watson, NR et al. 1992. Biochem Genet 30:371-383     Reference: September 1st, 2003
Gene Product: October 2nd, 2020
23 days agoalt2 L-alanine:2-oxoglutarate aminotransferase2: electrophoretic mobility; alt1 and alt2 interact to form heterodimers
 
   Watson, NR et al. 1992. Biochem Genet 30:371-383     Reference: September 1st, 2003
Gene Product: October 2nd, 2020
23 days agoalt3 L-alanine:2-oxoglutarate aminotransferase3: electrophoretic mobility
 
   Watson, NR et al. 1992. Biochem Genet 30:371-383     Reference: September 1st, 2003
Gene Product: October 2nd, 2020
23 days agoarftf11 ARF-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Saidi, A; Hajibarat, Z. 2020. Notulae Scientia Biologicae 12:646-657     Reference: October 2nd, 2020
Variation: July 7th, 2017
23 days agoarftf16 ARF-transcription factor 16: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Saidi, A; Hajibarat, Z. 2020. Notulae Scientia Biologicae 12:646-657     Reference: October 2nd, 2020
Variation: January 10th, 2020
23 days agoarftf23 ARF-transcription factor 23: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Saidi, A; Hajibarat, Z. 2020. Notulae Scientia Biologicae 12:646-657     Reference: October 2nd, 2020
Variation: July 7th, 2017
23 days agoarftf26 ARF-transcription factor 26: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Saidi, A; Hajibarat, Z. 2020. Notulae Scientia Biologicae 12:646-657     Reference: October 2nd, 2020
Variation: July 7th, 2017
23 days agoarftf31 ARF-transcription factor 31: plays a key role in low P responses and root architecture regulationLocus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Saidi, A; Hajibarat, Z. 2020. Notulae Scientia Biologicae 12:646-657     Reference: October 2nd, 2020
Variation: August 7th, 2016
23 days agoalt4 L-alanine:2-oxoglutarate aminotransferase4: the relationship between alt4 and previously reported genes alt1, alt2 or alt3 is not clear as sequences for the latter were not published;
5.03
GRMZM2G088064
Tausta, SL et al. 2014. J Exp Bot 65:3543-3555     Reference: November 20th, 2014
Gene Product: October 2nd, 2020
Variation: February 26th, 2010
Gene Model: July 23rd, 2014
23 days agoalt5 alanine aminotransferase5: putative alanine aminotransferase; found in embryo (Davidson 2011), not reported in seedling leaf (Tausta et al 2014)
7.02
GRMZM2G117230
Tausta, SL et al. 2014. J Exp Bot 65:3543-3555     Reference: November 20th, 2014
Gene Product: October 2nd, 2020
Gene Model: July 16th, 2020
23 days agoalt8 alanine amino transferase8: bundle sheath alanine transaminase; see also alt7 and alt9
 
GRMZM5G840582
Tausta, SL et al. 2014. J Exp Bot 65:3543-3555     Reference: November 20th, 2014
Gene Product: October 2nd, 2020
Gene Model: July 23rd, 2014
23 days agoalt10 alanine aminotransferase10: putative alanine aminotransferase weakly expressed in seedling leaf (Tausta et al 2014)
 
GRMZM2G124963
Tausta, SL et al. 2014. J Exp Bot 65:3543-3555     Reference: November 20th, 2014
Gene Product: October 2nd, 2020
Variation: February 20th, 2019
Gene Model: August 1st, 2014
23 days agoalt11 alanine aminotransferase11:
 
GRMZM2G088018
    Gene Product: October 2nd, 2020
Gene Model: July 16th, 2020
23 days agoalt12 alanine aminotransferase12: heat responsive gene
 
GRMZM5G828630
Yao, QL; Di, S-Z. 2020. Intl J Agric Biol 23:475-483     Reference: July 22nd, 2020
Gene Product: October 2nd, 2020
Gene Model: July 22nd, 2020
23 days agosi3 silky3: mutants have silky ears and tassels; up regulated in mutant plants
 
AC209624.2_FG001
Luo, HS et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00043     Reference: October 1st, 2020
Gene Product: October 2nd, 2020
Variation: October 2nd, 2020
Gene Model: October 1st, 2020
23 days agoalt9 alanine aminotransferase9: putative leaf alanine transminase
7.04
GRMZM2G053999
Tausta, SL et al. 2014. J Exp Bot 65:3543-3555     Reference: November 20th, 2014
Gene Product: October 2nd, 2020
Variation: January 13th, 2015
Gene Model: July 23rd, 2014
24 days agomyb53 MYB-transcription factor 53: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.09
   Han, QH et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12864     Reference: October 1st, 2020
Variation: September 25th, 2007
24 days agogdcp1 glycine decarboxylase1: cDNA sequences, SSR umc1526
10.01
GRMZM2G104310
Li, Z et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00320     Reference: October 1st, 2020
Gene Product: September 1st, 2003
Variation: October 6th, 2015
Gene Model: October 6th, 2015
24 days agobx4 benzoxazinone synthesis4: endoplasmic reticulum P450 monoxygenase; synthesis of cyclic hydroxamates/DIMBOA; insect resistance in young seedlings; NAM SNP PHM1184
4.01
GRMZM2G172491
Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: October 24th, 2011
Variation: October 27th, 2011
Gene Model: October 24th, 2011
24 days agorca1 RUBISCO activase1: single copy leaf cDNA csu901 smilar to RUBISCO activaseencodes the beta form of RUBISCO activase
4.00
GRMZM2G162282
Li, Z et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00320     Reference: October 1st, 2020
Gene Product: October 28th, 2014
Variation: September 1st, 2003
Gene Model: February 11th, 2014
24 days agocsu634  : protein phosphatase 2C-like (Alexandrov et al.)
9.05
GRMZM2G006429
Han, QH et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12864     Reference: October 1st, 2020
Variation: April 20th, 2017
Gene Model: April 20th, 2017
24 days agobd1 branched silkless1: ear silkless with indeterminate branches at base; tassel proliferated, bushy
7.05
GRMZM2G307119
Luo, HS et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00043   At5g18560 (TAIR)
LOC_Os01g21820 (MSU/TIGR)
Os07g0669500 (Gramene)
Reference: October 1st, 2020
Gene Product: July 27th, 2009
Variation: August 13th, 2011
Gene Model: July 14th, 2011
24 days agoc1 colored aleurone1: C1 colored; C1-I dominant colorless; c1 colorless, includes c1-p (pigment inducible by light at germination), c1-n (not inducible)
9.01
   Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: June 16th, 2015
Variation: March 27th, 2013
24 days agocat2 catalase2: electrophoretic mobility; null allele is known; cytosolic/glyoxysomal; tetrameric; intra/interlocus hybrid bands occur
1.01
   Li, Z et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00320     Reference: October 1st, 2020
Gene Product: September 1st, 2003
Variation: September 21st, 2012
24 days agogo1 glycolate oxidase1: seedling lethal necrotic unless supplied high CO2; photorespiration.
 
GRMZM2G129246
Li, Z et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00320     Reference: October 1st, 2020
Gene Product: June 26th, 2009
Variation: April 4th, 2011
Gene Model: January 12th, 2016
24 days agopdk2 pyruvate, orthophosphate dikinase2: cytosolic
8.04
GRMZM2G097457
Li, Z et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00320     Reference: October 1st, 2020
Gene Product: July 28th, 2014
Variation: December 19th, 2017
Gene Model: November 21st, 2012
24 days agompk1 MAP kinase1: cDNA sequence; single copy
9.06
GRMZM2G053987
Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: July 12th, 2013
Variation: January 16th, 2013
Gene Model: July 9th, 2013
24 days agompk2 MAP kinase2: functions in brassinosteroid signaling in antioxidant defense (Zhang et al 2010) cDNA sequence; single copy (Berberich et al 1999)
9.02
GRMZM2G020216
Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: July 12th, 2013
Variation: January 18th, 2013
Gene Model: July 9th, 2013
24 days agomyb8 myb transcription factor8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G041415
Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: February 16th, 2011
Variation: February 16th, 2011
Gene Model: July 28th, 2016
24 days agozmm14 Zea mays MADS14: during spikelet development zmm4 probably works as a selector gene which is involved in distinguishing the upper and lower floret
1.02
GRMZM2G099522
Luo, HS et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00043     Reference: October 1st, 2020
Variation: August 28th, 2013
Gene Model: August 14th, 2017
24 days agotcptf31 TCP-transcription factor 31: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: September 27th, 2019
24 days agosimk1 salt-induced MAP kinase1:
 
GRMZM2G127141
Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: July 12th, 2013
Gene Model: July 12th, 2013
24 days agobx7 benzoxazinone synthesis7: cytosolic O-methyl transferase; synthesis of cyclohydroxamates/DIMBOA; insect resistance in young seedlings; SSR umc2039, INDEL IDP478.
4.03
GRMZM2G441753
Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: October 31st, 2011
Variation: October 26th, 2011
Gene Model: October 19th, 2011
24 days agobx3 benzoxazinone synthesis3: endoplasmic reticulum monoxygenase; synthesis of cyclic hydroxamates/DIMBOA; insect resistance in young seedlings; SSR umc1017
4.01
GRMZM2G167549
Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: October 19th, 2011
Variation: November 12th, 2013
Gene Model: October 24th, 2011
24 days agobx5 benzoxazinone synthesis5: endoplasmic reticulum monoxygenase; synthesis of cyclic hydroxamates/DIMBOA; insect resistance in young seedlings; SSR umc1276.
4.01
GRMZM2G063756
Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: October 24th, 2011
Variation: October 27th, 2011
Gene Model: October 24th, 2011
24 days agobx2 benzoxazinone synthesis2: endoplasmic reticulum P450 monoxygenase; synthesis cyclic hyroxamates/DIMBOA; insect resistance in young seedlings; SSR umc1164, umc1682
4.01
GRMZM2G085661
Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: April 8th, 2013
Variation: April 12th, 2019
Gene Model: October 24th, 2011
24 days agobde1 bearded-ear1: floral development MADS box transcription factor; recessive mutant has silky-polytypic-like ear
5.06
   Luo, HS et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00043   AT2G45650 (TAIR) Reference: October 1st, 2020
Gene Product: April 1st, 2011
Variation: October 5th, 2009
24 days agosbp3 (GRASSIUS) SBP-transcription factor 3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.03
GRMZM2G106798
Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: July 5th, 2019
Gene Model: June 11th, 2018
24 days agosi1 silky1: (aka ts8, ms-si) multiple silks in ear; sterile tassel with silks
6.01
   Luo, HS et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00043     Reference: October 1st, 2020
Variation: November 2nd, 2015
24 days agofgs1 ferredoxin-dependent glutamate synthase1: deduced amino acid sequence homologous with E. coli NADPH-glutamate synthase, single copy by Southern blot analysis
7.05
   Li, Z et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00320     Reference: October 1st, 2020
Gene Product: September 1st, 2003
Variation: July 24th, 2015
24 days agobx8 benzoxazinone synthesis8: cytosolic glucosyltransferase; synthesis of cyclic hydroxamates/DIMBOA; insect resistance in young seedlings
4.01
GRMZM2G085054
Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: October 20th, 2011
Variation: October 31st, 2011
Gene Model: October 20th, 2011
24 days agobx9 benzoxazinone synthesis9: cytosolic glucosyl transferase; redundant with bx8; synthesis of cyclic hydroxamates/DIMBOA; insect resistance in young seedlings
1.06
GRMZM2G161335
Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: October 20th, 2011
Variation: October 27th, 2011
Gene Model: October 20th, 2011
24 days agompk7 MAP kinase7:
 
GRMZM2G002100
Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: July 12th, 2013
Variation: January 18th, 2013
Gene Model: July 9th, 2013
24 days agopin10 PIN-formed protein10: similar to Arabidopsis PIN10 (Forestan et al 2012)
 
GRMZM2G126260
Han, QH et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12864     Reference: October 1st, 2020
Gene Product: April 21st, 2014
Gene Model: January 24th, 2013
24 days agobx10 benzoxazinone synthesis10:
 
GRMZM2G311036
Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
24 days agobx11 benzoxazinone synthesis11:
 
GRMZM2G336824
Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
24 days agobx12 benzoxazinone synthesis12:
 
GRMZM2G023325
Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: July 8th, 2013
Variation: July 8th, 2013
Gene Model: July 8th, 2013
24 days agobx13 benzoxazinone synthesis13: encodes a 2-oxoglutarate-dependent dioxygenase that catalyzes the conversion of DIMBOA-Glc into a new benzoxazinoid intermediate (TRIMBOA-Glc) by an uncommon reaction involving a hydroxylation and a likely ortho-rearrangement of a methoxy group.
 
AC148152.3_FG005
Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: June 20th, 2016
Variation: June 20th, 2016
Gene Model: June 20th, 2016
24 days agobx6 benzoxazinone synthesis6: cytosolic 2-oxoglutarate-dependent dioxygenase; synthesis of cyclohydroxamates/DIMBOA; insect resistance in young seedlings; SSR umc1232
4.01
   Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: June 20th, 2016
Variation: April 12th, 2019
24 days agompk3 MAP kinase3: transcript and protein activity upregulated by ABA and H2O2
1.03
GRMZM2G017792
Zhang, CP et al. 2020. New Phytol pp.doi: 10.1111/nph.16974     Reference: October 1st, 2020
Gene Product: July 9th, 2013
Variation: July 12th, 2013
Gene Model: July 9th, 2013
25 days agons2 narrow sheath2: embryonic transcription factor; duplicate factor with ns1; closely related to 2 other WOX3 genes, wox3a and wox3b, aka hb82, hb16 (Grassius named)
4.08
   Conklin, PA et al. 2020. Development pp.doi: 10.1242/dev.193623     Reference: September 30th, 2020
Gene Product: August 25th, 2017
Variation: June 29th, 2005
25 days agoga2ox6 gibberellin 2-oxidase6:
6.05
   Sowinski, P et al. 2020. Frontiers Plant Sci 11:576941     Reference: September 30th, 2020
Gene Product: October 27th, 2014
25 days agorf3 restorer of fertility3: dominant Rf3 restores fertility to cms-S
2.09
   Qin, XN et al. 2020. PeerJ doi: 10.7717/peerj.10015     Reference: September 30th, 2020
Gene Product: December 27th, 2016
Variation: September 1st, 2003
25 days agoremo4 remorin4:
7.04
GRMZM2G081949
Sowinski, P et al. 2020. Frontiers Plant Sci 11:576941     Reference: September 30th, 2020
Variation: September 1st, 2003
Gene Model: September 11th, 2018
25 days agohsftf24 HSF-transcription factor 24: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Sowinski, P et al. 2020. Frontiers Plant Sci 11:576941     Reference: September 30th, 2020
Gene Product: May 15th, 2020
25 days agohsftf4 HSF-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Sowinski, P et al. 2020. Frontiers Plant Sci 11:576941     Reference: September 30th, 2020
Gene Product: May 15th, 2020
25 days agoumc1653  :
6.07
GRMZM2G438895
Sowinski, P et al. 2020. Frontiers Plant Sci 11:576941     Reference: September 30th, 2020
Variation: September 1st, 2003
Gene Model: August 30th, 2018
25 days agopsan2 photosystem I N subunit2:
10.03
GRMZM2G009048
Sowinski, P et al. 2020. Frontiers Plant Sci 11:576941     Reference: September 30th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2018
25 days agons1 narrow sheath1: plant brachytic, duplicate factor with ns2; leaf sheath and blade taper, blade widens toward tip; husks narrowed, ears exposed
2.05
   Conklin, PA et al. 2020. Development pp.doi: 10.1242/dev.193623     Reference: September 30th, 2020
Gene Product: August 25th, 2017
Variation: February 20th, 2015
25 days agonac1 NaCl stress protein1: encodes small plama membrane proteolipid involved in ion homeostasis, and response to salinity
10.04
   Sowinski, P et al. 2020. Frontiers Plant Sci 11:576941     Reference: September 30th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
25 days agomsh1 male sterile protein homolog1: leaf cDNA 6C06C01, similar to Arabidopsis MS2
4.08
GRMZM2G036217
Sowinski, P et al. 2020. Frontiers Plant Sci 11:576941     Reference: September 30th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: April 4th, 2015
25 days agohsp7 heat shock protein7:
 
GRMZM5G802801
Sowinski, P et al. 2020. Frontiers Plant Sci 11:576941     Reference: September 30th, 2020
Gene Product: September 1st, 2003
Gene Model: January 14th, 2019
25 days agotir2 transport inhibitor response2:
 
GRMZM2G155849
Sowinski, P et al. 2020. Frontiers Plant Sci 11:576941     Reference: September 30th, 2020
Gene Product: July 25th, 2017
Gene Model: May 29th, 2019
25 days agorf10 restoration of fertility10: dominant Rf10 restores fertility to cms-S
 
   Qin, XN et al. 2020. PeerJ doi: 10.7717/peerj.10015     Reference: September 30th, 2020
Variation: September 30th, 2020
25 days agohis401 histone H4 family1:
 
GRMZM2G073275
Conklin, PA et al. 2020. Development pp.doi: 10.1242/dev.193623     Reference: September 30th, 2020
Gene Product: September 1st, 2003
Gene Model: September 30th, 2020
25 days agohis402 histone H4 family2:
 
GRMZM2G084195
Conklin, PA et al. 2020. Development pp.doi: 10.1242/dev.193623     Reference: September 30th, 2020
Gene Product: September 1st, 2003
Gene Model: September 30th, 2020
25 days agohis403 histone H4 family3:
 
GRMZM2G421279
Conklin, PA et al. 2020. Development pp.doi: 10.1242/dev.193623     Reference: September 30th, 2020
Gene Product: September 1st, 2003
Gene Model: September 30th, 2020
25 days agohis404 histone H4 family4:
 
GRMZM2G072855
Conklin, PA et al. 2020. Development pp.doi: 10.1242/dev.193623     Reference: September 30th, 2020
Gene Product: September 1st, 2003
Gene Model: September 30th, 2020
25 days agohis406 histone H4 family6:
 
GRMZM2G181153
Philipps, G et al. 1986. Gene 42:225-229     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Gene Model: September 30th, 2020
25 days agohis301 histone H3 family1:
 
GRMZM2G401581
Chaubet, N. 1986. Plant Mol Biol 6:253-263     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Gene Model: September 30th, 2020
25 days agohis407 histone H4 family7:
 
GRMZM2G349651
Philipps, G et al. 1986. Gene 42:225-229     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Gene Model: September 30th, 2020
25 days agopin1 PIN-formed protein1: gene product cross-reacts with anti-AtPIN1 antibody and in tassel and ear, the PIN proteins are localized to a group of cells in subepidermal meristematic layers.
9.01
GRMZM2G398650
Sowinski, P et al. 2020. Frontiers Plant Sci 11:576941     Reference: September 30th, 2020
Gene Product: April 21st, 2014
Variation: January 20th, 2015
Gene Model: June 7th, 2012
26 days agoacc2 acetyl-CoA carboxylase2: graminicide (e.g., sethoxydim, haloxyfop) resistance; encodes acetyl-CoA carboxylase
2.04
GRMZM5G858094
Le Corre, V et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2006633117     Reference: September 29th, 2020
Gene Product: September 29th, 2020
Variation: July 7th, 2012
Gene Model: July 7th, 2012
26 days agocchh35 Cys2His2 Zinc Finger35: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
10.02
GRMZM2G068710
Matonyei, TK, et al. 2020. Sci. Rep.. 10:7320     Reference: September 29th, 2020
Gene Product: December 6th, 2019
Gene Model: January 23rd, 2018
26 days agoacc1 acetyl-coenzyme A carboxylase1: tissue-culture selected resistance to cyclohexanedione (e.g., sethoxydim) and aryloxy phenoxypropionate (e.g., haloxyfop) herbicides; encodes acetyl-CoA carboxylase
10.04
AC197672.3_FG002
Le Corre, V et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2006633117     Reference: September 29th, 2020
Gene Product: September 1st, 2003
Variation: July 6th, 2012
Gene Model: July 7th, 2012
26 days agoms7 male sterile7: like ms2; tapetal cell dysfunction
7.02
GRMZM5G890224
An, XL, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2010255117   AT5G22260 (TAIR)
LOC_Os09g27620 (MSU/TIGR)
Os09g0449000 (Gramene)
Reference: September 29th, 2020
Gene Product: July 8th, 2017
Variation: September 9th, 2020
Gene Model: July 6th, 2017
26 days agop1 pericarp color1: dominant P1 regulates red pigment (phlobaphenes) in cob and pericarp (ex. P1-wr red cob; P1-rr red pericarp and cob) and in tassel glumes and husks; tissue-specific allele variations; SSR phi095; myb homologue
1.03
   Su, W et al. 2020. Genetics pp.doi: 10.1534/genetics.120.303592     Reference: September 29th, 2020
Gene Product: October 13th, 2010
Variation: September 29th, 2020
26 days agomate1 multidrug and toxic compound extrusion1: confers aluminum tolerance in lines that carry 3 adjacent identical copies of the mate1 gene (Maron et al 2013)
 
GRMZM5G870170
Matonyei, TK, et al. 2020. Sci. Rep.. 10:7320     Reference: September 29th, 2020
Gene Product: August 17th, 2015
Variation: March 19th, 2013
Gene Model: March 19th, 2013
26 days agop2 pericarp color2: nearly identical to p1, active in anther and silk but does not determine pericarp color; SSR's umc2096, umc2097.
1.03
GRMZM2G057027
Su, W et al. 2020. Genetics pp.doi: 10.1534/genetics.120.303592     Reference: September 29th, 2020
Variation: September 29th, 2020
Gene Model: August 6th, 2014
26 days agomate6 multidrug and toxic compound extrusion6: Sorghum ortholog: Sb04g001840
 
GRMZM2G065154
Matonyei, TK, et al. 2020. Sci. Rep.. 10:7320   LOC_Os02g02980 (MSU/TIGR) Reference: September 29th, 2020
Gene Product: August 17th, 2015
Gene Model: August 17th, 2015
26 days agonrat2 nramp aluminum transporter2: 81.8% sequence identity with OsNrat1, an Al3+ transporter involved in rice Al tolerance (Matonyei et al., 2020)
 
GRMZM2G168747
Matonyei, TK, et al. 2020. Sci. Rep.. 10:7320     Reference: September 29th, 2020
Gene Product: August 17th, 2015
Gene Model: May 1st, 2020
27 days agowx1 waxy1: amylopectin (stained red by iodine) replaces amylose (blue staining) in endosperm and pollen; extensive allelic series; application: highly branched starch has gelling properties, used for food gels, adhesives, and other industrial purposes; SSRs phi022, 027, 061NCBI: granule-bound starch synthase 1, chloroplastic/amyloplastic
9.03
   Luo, MJ et al. 2020. Sci. Rep. 10:15851     Reference: September 28th, 2020
Gene Product: June 4th, 2008
Variation: September 28th, 2020
27 days agoAI714716  :
3.09
GRMZM2G418515
    Variation: July 29th, 2004
Gene Model: September 28th, 2020
27 days agoaldr1 aldose reductase1: Expression reduced under drought or salt treatment
3.06
GRMZM2G479423
de Sousa, SM et al. 2009. Plant Physiol Biochem 47:98-104     Reference: September 28th, 2020
Gene Product: September 28th, 2020
Gene Model: September 28th, 2020
29 days agoincw1 cell wall invertase1: full-length cDNA, similar to tobacco and carrot cell-wall invertase; Northerns specific to cell suspension and developing endosperm 28-32 DAP; expressed protein cross-reacts with antibodies to carrot cell-wall invertase; low copy number
5.04
   Niu, LJ et al. 2020. Frontiers Plant Sci 11:576385     Reference: September 26th, 2020
Gene Product: June 12th, 2018
Variation: May 27th, 2015
29 days agoacp1 acid phosphatase1: electrophoretic mobility; cytosolic; dimericencodes a metalloenzyme that hydrolyzes phosphate esters and anhydrides under acidic conditions.
9.03
AC211394.4_FG004
Niu, LJ et al. 2020. Frontiers Plant Sci 11:576385     Reference: September 26th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: July 27th, 2016
29 days agovp9 viviparous9: (was y7, z1, zds1) like vp2; vp9-4889 dormant, pale aleurone, pale green seedling
7.02
GRMZM2G454952
Wang, MP et al. 2020. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2020.09.025     Reference: September 26th, 2020
Gene Product: December 13th, 2011
Variation: September 26th, 2020
Gene Model: March 24th, 2017
29 days agocdo1081a  : probed with an oat leaf cDNA.
1.01
GRMZM2G119494
Niu, LJ et al. 2020. Frontiers Plant Sci 11:576385     Reference: September 26th, 2020
Variation: May 3rd, 2016
Gene Model: May 3rd, 2016
29 days agopox1 guaiacol peroxidase1:
 
GRMZM2G104394
Niu, LJ et al. 2020. Frontiers Plant Sci 11:576385     Reference: September 26th, 2020
Gene Product: September 1st, 2003
Gene Model: February 9th, 2015
29 days agoaed3 aspartyl protease3: may be involved in the systemic acquired resistance against fungal invasion; expression increases during infection with Ustilago maydis.
 
GRMZM2G024099
Niu, LJ et al. 2020. Frontiers Plant Sci 11:576385     Reference: September 26th, 2020
Gene Product: September 26th, 2020
Gene Model: September 26th, 2020
30 days agobnk*-N1519C brown kernelN1519C: brown floury wrinkled defective kernel
1.00 - 1.05
   Neuffer, MG. 1994. Personal communication     Reference: September 1st, 2003
Variation: September 25th, 2020
32 days agopsy2 phytoene synthase2: single copy cDNA, csu572, similar to tomato phytoene synthase; carotenoid biosynthesis
8.07
GRMZM2G149317
Du, KT et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00903     Reference: September 23rd, 2020
Gene Product: December 14th, 2011
Variation: May 12th, 2013
Gene Model: June 8th, 2012
32 days agorpd3 RPD3 histone deacetylase homolog: cDNA complements yeast rpd3, multiple copy, SSR umc1173.
4.09
GRMZM2G172883
Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: February 12th, 2020
Variation: November 11th, 2014
Gene Model: November 6th, 2014
32 days agotha1 thylakoid assembly1: Required for thylakoid protein targeting via the cpSec pathway. SecA homolog. (A. Barkan, 2015)pale green, high chlorophyll fluorescence, seedling lethat; thylakoid protein targeting by sec pathway
3.04
GRMZM5G880102
Yan, Z et al. 2020. Planta 252:60   AT4G01800 (TAIR)
LOC_Os01g21820 (MSU/TIGR)
Os01g0321300 (Gramene)
Reference: September 23rd, 2020
Gene Product: July 22nd, 2009
Variation: June 25th, 2004
Gene Model: April 3rd, 2020
32 days agohdac9 histone deacetylase9:
 
GRMZM2G057044
Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: February 12th, 2020
Variation: September 1st, 2003
Gene Model: February 12th, 2020
32 days agozip5 zinc-regulated, iron-regulated transporter-like protein5:
6.04
GRMZM2G064382
Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: June 5th, 2019
Variation: September 1st, 2003
Gene Model: August 25th, 2018
32 days agomet2 DNA methyl transferase2:
10.06
GRMZM2G025592
Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: April 6th, 2018
Variation: November 13th, 2018
Gene Model: November 16th, 2011
32 days agomet5 DNA methyl transferase5:
2.02
GRMZM2G005310
Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: April 6th, 2018
Variation: June 9th, 2018
Gene Model: December 22nd, 2014
32 days agomet3 DNA methyl transferase3:
9.07
   Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: April 6th, 2018
Variation: February 13th, 2016
32 days agomet7 DNA methyl transferase7:
1.01
   Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: April 6th, 2018
Variation: December 22nd, 2014
32 days agohda102 histone deacetylase:
2.04
GRMZM2G119703
Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: February 12th, 2020
Variation: May 28th, 2011
Gene Model: November 6th, 2014
32 days agohda108 histone deacetylase: mutant plants exhibit many developmental defects: significant reduction in plant height, alterations of shoot and leaf development, alterations of inflorescence patterning and fertility
4.05
   Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: September 1st, 2003
Variation: February 1st, 2018
32 days agohda109 histone deacetylase:
2.08
GRMZM2G457889
Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: February 12th, 2020
Variation: November 11th, 2014
Gene Model: November 11th, 2014
32 days agohda110 histone deacetylase:
7.01
GRMZM2G107309
Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: February 12th, 2020
Variation: September 1st, 2003
Gene Model: November 6th, 2014
32 days agohdt102 histone deacetylase102:
8.05
GRMZM2G100146
Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: February 12th, 2020
Variation: November 25th, 2008
Gene Model: July 27th, 2016
32 days agohdt103 histone deacetylase103:
6.07
GRMZM2G159032
Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: February 12th, 2020
Variation: November 25th, 2008
Gene Model: July 27th, 2016
32 days agopht2 phosphate transporter protein2:
1.08
GRMZM2G154090
Xu, YJ et al. 2020. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2020.09.039     Reference: September 23rd, 2020
Gene Product: June 16th, 2016
Variation: February 4th, 2011
Gene Model: May 27th, 2015
32 days agozip1 zinc-regulated, iron-regulated transporter-like protein1:
 
GRMZM2G001803
Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
32 days agozip2 zinc-regulated, iron-regulated transporter-like protein2:
 
   Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: June 5th, 2019
32 days agozip3 zinc-regulated, iron-regulated transporter-like protein3:
 
GRMZM2G045849
Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
32 days agozip4 zinc-regulated, iron-regulated transporter-like protein4:
 
GRMZM2G111300
Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
32 days agozip6 zinc-regulated, iron-regulated transporter-like protein6:
 
GRMZM2G034551
Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
32 days agozip7 zinc-regulated, iron-regulated transporter-like protein7:
 
GRMZM2G015955
Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
32 days agozip8 zinc-regulated, iron-regulated transporter-like protein8:
 
GRMZM2G093276
Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
32 days agoirt1 iron-regulated transporter1:
 
GRMZM2G118821
Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
32 days agomet4 DNA methyl transferase4:
8.05
GRMZM2G157589
Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: April 6th, 2018
Variation: February 10th, 2010
Gene Model: December 22nd, 2014
32 days agomet6 DNA methyl transferase6:
8.05
GRMZM2G065599
Shafiq, S et al. 2020. Int J Mol Sci 21:6959     Reference: September 23rd, 2020
Gene Product: April 6th, 2018
Variation: November 20th, 2012
Gene Model: December 23rd, 2014
32 days agopsy3 phytoene synthase3: induced by salt and drought but not ABA; complements bacterial PSY deficiency (Li et al 2008)
7.03
   Du, KT et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00903     Reference: September 23rd, 2020
Gene Product: December 14th, 2011
Variation: October 8th, 2008
33 days agoms33 male sterile33:
2.09
GRMZM2G070304
Zhu, TT et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.09.013   LOC_Os11g45400 (MSU/TIGR) Reference: September 22nd, 2020
Gene Product: March 25th, 2019
Variation: December 4th, 2018
Gene Model: March 17th, 2018
33 days agolu1 lutescent1: pale yellow green leaves with lu2
5.01 - 5.03
   Shortess, DK et al. 1968. Genetics 58:227-235     Reference: September 1st, 2003
Variation: September 22nd, 2020
33 days agolu2 lutescent2: pale green seedling leaves with lu1; becoming yellow at maturity
 
   Shortess, DK et al. 1968. Genetics 58:237-248     Reference: September 1st, 2003
Variation: September 22nd, 2020
33 days agonpf2 nitrate transporter/peptide transporter family2: encodes a a pH dependent non-biphasic high-affinity nitrate-specific transport protein
 
GRMZM2G161459
Wang, X et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00361   AT1G12110 (TAIR) Reference: September 22nd, 2020
Gene Product: September 1st, 2003
Variation: September 11th, 2017
Gene Model: September 11th, 2017
33 days agonpf1 nitrate transporter/peptide transporter family1: encodes a low-affinity nitrate transporter with efflux activity; switches to a high-affinity chloride selective transporter, when supplied chloride.
10.03
GRMZM2G086496
Wang, X et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00361   AT1G12110 (TAIR) Reference: September 22nd, 2020
Gene Product: September 1st, 2003
Variation: September 11th, 2017
Gene Model: September 11th, 2017
34 days agomads67 MADS-transcription factor 67: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.04
GRMZM2G147716
Zhang, C et al. 2020. Genomics pp.doi: 10.1016/j.ygeno.2020.09.030     Reference: September 21st, 2020
Gene Product: September 1st, 2003
Gene Model: February 7th, 2019
36 days agogrp7 glycine-rich protein7:
 
GRMZM2G082931
    Gene Product: September 18th, 2020
Gene Model: September 19th, 2020
37 days agogrp2 glycine-rich protein2:
10.03
GRMZM2G009448
Dai, DW et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa348     Reference: July 27th, 2020
Gene Product: September 18th, 2020
Variation: June 5th, 2014
Gene Model: May 27th, 2015
37 days agogrp1 glycine-rich protein1: protein with high glycine content and repetitive glycine stretches; putative cell wall components
1.08
   Manoli, A et al. 2012. J Plant Physiol 169:807-815     Reference: August 22nd, 2020
Gene Product: September 18th, 2020
Variation: June 5th, 2014
37 days agogrp3 glycine-rich protein3: single or low copy number cDNA;
5.03
   Stagnati, L et al. 2020. G3 10:1685-1696     Reference: May 6th, 2020
Gene Product: September 18th, 2020
Variation: September 1st, 2003
37 days agogrp6 glycine-rich protein6: expression restricted to the root apex; Al-induced protein
 
GRMZM2G118759
    Gene Product: September 18th, 2020
Gene Model: January 15th, 2020
37 days agonrt6 nitrate transport6:
 
GRMZM2G141491
    Gene Product: September 1st, 2003
Gene Model: September 18th, 2020
37 days agopis1 phosphatidylinositol synthase1: involved in plant responses to drought stress
 
GRMZM2G110646
Liu, X et al. 2013. Plant Cell Environ 36:1037-1055     Reference: September 18th, 2020
Gene Product: September 18th, 2020
Gene Model: September 18th, 2020
37 days agogrp5 glycine-rich protein5: stigma-specific; may play a role in maintaining silk structure during development
 
GRMZM2G146308
Tao, TY et al. 2006. Plant Cell Rep 25:848-858     Reference: September 18th, 2020
Gene Product: September 18th, 2020
Gene Model: September 18th, 2020
38 days agorps6a ribosomal proteinS6a: mature mRNA stored in embryo axes
7.04
GRMZM2G054136
Sun, XC et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153281     Reference: September 17th, 2020
Gene Product: September 1st, 2003
Variation: July 3rd, 2013
Gene Model: April 15th, 2015
38 days agobas1 beta alanine synthase1: single copy, oat cDNA cdo385
7.03 - 7.04
GRMZM2G077673
Sun, XC et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153281     Reference: September 17th, 2020
Gene Product: September 1st, 2003
Variation: October 18th, 2013
Gene Model: July 27th, 2016
38 days agotor1 target of rapamycin1: similar to Arabidpsis FKBP12-rapamycin complex-associated proteinexpression is highly regulated during germination
6.05
GRMZM2G049342
Sun, XC et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153281     Reference: September 17th, 2020
Gene Product: November 21st, 2017
Gene Model: August 27th, 2018
38 days agomkkk18 MAP kinase kinase kinase18: function inferred from sequence similarity (Kong et al 2013)
 
GRMZM2G305066
Li, CL et al. 2020. Mol Breed 40:92     Reference: September 17th, 2020
Gene Product: July 10th, 2013
Gene Model: July 11th, 2013
38 days agohex9 hexokinase9:
 
GRMZM2G467069
Li, CL et al. 2020. Mol Breed 40:92     Reference: September 17th, 2020
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
38 days agocdpk21 calcium dependent protein kinase21:
 
GRMZM2G047479
Li, CL et al. 2020. Mol Breed 40:92     Reference: September 17th, 2020
Gene Product: December 3rd, 2013
Gene Model: January 10th, 2018
38 days agomcsf1 mitochondrial CAF-like splicing factor1: mutants have empty pericarp
 
GRMZM2G087395
Yang, Y-Z et al. 2020. RNA Biol. doi: 10.1080/15476286.2020.1817267     Reference: September 17th, 2020
Gene Product: July 23rd, 2009
Variation: July 1st, 2019
Gene Model: July 1st, 2019
38 days agoemp32 empty pericarp32: mutants have an empty pericarp phenotype
 
GRMZM2G089959
Yang, Y-Z et al. 2020. RNA Biol. doi: 10.1080/15476286.2020.1817267   At5g57250 (TAIR) Reference: September 17th, 2020
Gene Product: December 27th, 2016
Variation: September 17th, 2020
Gene Model: June 12th, 2020
38 days agoppr282 pentatricopeptide repeat protein282: ortholog of Arabidopsis SLO3
 
GRMZM2G177845
Yang, Y-Z et al. 2020. RNA Biol. doi: 10.1080/15476286.2020.1817267   AT3G61360 (TAIR) Reference: September 17th, 2020
Gene Product: December 27th, 2016
Gene Model: September 17th, 2020
38 days agorps6k1 ribosomal protein S6 kinase1: responsible for in vivo ribosomal protein S6 (S6rp) phosphorylation
 
GRMZM2G080001
Sun, XC et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153281     Reference: September 17th, 2020
Gene Product: September 17th, 2020
Gene Model: September 17th, 2020
38 days agorps6b ribosomal proteinS6b:
 
GRMZM5G851698
Sun, XC et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153281     Reference: September 17th, 2020
Gene Product: September 1st, 2003
Gene Model: September 17th, 2020
38 days agotgz21 transglutaminase21:
2.04
GRMZM2G045005
Han, X et al. 2020. J Food Process Preserv doi: 10.1111/jfpp.14756     Reference: September 17th, 2020
Gene Product: December 24th, 2015
Variation: February 2nd, 2010
Gene Model: December 24th, 2015
38 days agomat-r(mtNB) maturase related:
 
GRMZM5G851769
Yang, Y-Z et al. 2020. RNA Biol. doi: 10.1080/15476286.2020.1817267     Reference: September 17th, 2020
Gene Product: September 1st, 2003
Gene Model: June 16th, 2020
39 days agoms5 male sterile5: anthers not exserted; affected at microspore mitosis
5.04 - 5.05
GRMZM2G166330
Huo, Y et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00105     Reference: September 16th, 2020
Gene Product: January 25th, 2019
Variation: September 16th, 2020
Gene Model: September 16th, 2020
39 days agorps8 ribosomal protein S8 homolog: multiple copies; leaf cDNA csu34 similar to ribosomal protein
4.09
GRMZM2G336875
Zhang, JH et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00849     Reference: September 16th, 2020
Gene Product: September 1st, 2003
Variation: April 17th, 2015
Gene Model: April 15th, 2015
39 days agoatp4 ATP synthase4: Chloroplast PPR-SMR protein. Activates atpB translation. Binds atpB 5'UTR. (A. Barkan, 2015)required for normal accumulation of the chloroplast ATP synthase
 
GRMZM2G128665
Zhang, JH et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00849     Reference: September 16th, 2020
Gene Product: December 30th, 2015
Variation: June 15th, 2013
Gene Model: June 15th, 2013
39 days agopgr3 proton gradient regulation3 homolog: Ortholog of Arabidopsis PGR3. Chloroplast PPR protein that stabilizes 5'-end of petL RNA and is required for accumulation of the thylakoid NDH complex. Global protein deficiencies imply additional functions in maize. (A. Barkan, 2015)Ortholog of Arabidopsis PGR3, a PPR protein that stabilizes 5'-end of cp petL RNA and is required for NDH accumulation. Additional functions in maize, with more global effect on accumulation of cp complexes.
 
GRMZM2G372632
Zhang, JH et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00849   AT4G31850 (TAIR)
LOC_Os10g28600 (MSU/TIGR)
Reference: September 16th, 2020
Gene Product: December 27th, 2016
Variation: December 30th, 2015
Gene Model: February 17th, 2015
39 days agorpp13lk3 recognition of Peronospora parasitica 13 like protein 3: encodes an adenylyl cyclase that is located in the mitochondrion; catalyse ATP for producing cAMP and may be involved in ABA-regulated heat resistance
 
GRMZM2G030024
Yang, H et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa431     Reference: September 16th, 2020
Gene Product: September 16th, 2020
Gene Model: September 16th, 2020
40 days agoafd1 absence of first division1: male and female sterility; early meiosis
6.07
GRMZM2G059037
Nan, G et al. 2011. BMC Plant Biology 11:120   AT5G05490 (TAIR)
LOC_Os05g50410 (MSU/TIGR)
Os05g0580500 (Gramene)
Reference: September 15th, 2020
Gene Product: July 30th, 2009
Variation: August 11th, 2011
Gene Model: July 14th, 2011
40 days agoam1 ameiotic1: male and female sterility - anaphase I equatorial; alleles am1-pra1(was pra1), am1-2 (was am2)affects switch to meiotic cell cycle
5.02
   Nan, G et al. 2011. BMC Plant Biology 11:120     Reference: September 15th, 2020
Variation: August 11th, 2011
40 days agomus1 MutS homolog1: cDNA similar to E. coli mutS
7.04
GRMZM2G056075
Nan, G et al. 2011. BMC Plant Biology 11:120     Reference: September 15th, 2020
Gene Product: August 15th, 2005
Variation: January 28th, 2013
Gene Model: August 5th, 2015
40 days agozyp1 synaptonemal complex protein ZIPPER1: Homlogous to Yeast ZIPPER1 (ZIP1), Arabidopsis ZYP1 and rice ZEP1.
 
GRMZM2G143590
Nan, G et al. 2011. BMC Plant Biology 11:120     Reference: September 15th, 2020
Gene Product: March 2nd, 2011
Variation: March 2nd, 2011
Gene Model: June 19th, 2014
40 days agopolm2 polymerase II transcription-mediator2: encodes part of the "CDK8" module that mediates transcription initiation with RNA Polymerase II
9.08
GRMZM5G828278
Nunez-Rios, T et al. 2020. Int J Dev Biol pp.doi: 10.1387/ijdb.200098sg     Reference: September 15th, 2020
Gene Product: December 29th, 2016
Variation: December 29th, 2016
Gene Model: December 29th, 2016
40 days agopolm3 polymerase II transcription-mediator3: encodes part of the "CDK8" module that mediates transcription initiation with RNA Polymerase II
9.03
GRMZM2G053588
Nunez-Rios, T et al. 2020. Int J Dev Biol pp.doi: 10.1387/ijdb.200098sg     Reference: September 15th, 2020
Gene Product: December 29th, 2016
Variation: December 29th, 2016
Gene Model: December 29th, 2016
40 days agoago18b argonaute18b: mutant affects length of central tassel branch
1.08
GRMZM2G457370
Nan, G et al. 2011. BMC Plant Biology 11:120     Reference: September 15th, 2020
Gene Product: August 12th, 2016
Variation: August 17th, 2019
Gene Model: August 12th, 2016
40 days agophs1 poor homologous synapsis1: affects homology search
9.00
GRMZM2G100103
Nan, G et al. 2011. BMC Plant Biology 11:120     Reference: September 15th, 2020
Gene Product: September 5th, 2006
Variation: August 7th, 2012
Gene Model: August 7th, 2012
40 days agospo1 topoisomerase-like enzyme1: Homolog of SPO11, which generates double-stranded breaks along meiotic chromosomes
 
GRMZM2G129913
Nan, G et al. 2011. BMC Plant Biology 11:120     Reference: September 15th, 2020
Gene Product: June 19th, 2014
Variation: April 21st, 2020
Gene Model: June 19th, 2014
40 days agopolm1 polymerase II transcription-mediator1: encodes part of the "CDK8" module that mediates transcription initiation with RNA Polymerase II
 
GRMZM2G114459
Nunez-Rios, T et al. 2020. Int J Dev Biol pp.doi: 10.1387/ijdb.200098sg     Reference: September 15th, 2020
Gene Product: December 29th, 2016
Variation: December 29th, 2016
Gene Model: December 29th, 2016
40 days agodmc1 disrupted meiotic cDNA homolog1:
 
GRMZM2G109618
Nan, G et al. 2011. BMC Plant Biology 11:120     Reference: September 15th, 2020
Variation: May 12th, 2017
Gene Model: January 27th, 2017
40 days agocdk8 cyclin dependent kinase8: encodes part of the "CDK8" module that mediates transcription initiation with RNA Polymerase II
5.03
GRMZM2G166771
Nunez-Rios, T et al. 2020. Int J Dev Biol pp.doi: 10.1387/ijdb.200098sg     Reference: September 15th, 2020
Gene Product: December 29th, 2016
Variation: December 29th, 2016
Gene Model: December 29th, 2016
40 days agorad51b recombination protein51 gene b: one of two loci producing cDNA homologous to yeast protein required with Dmc1 protein for meiotic homologous recombination
3.05
GRMZM2G084762
Nan, G et al. 2011. BMC Plant Biology 11:120     Reference: September 15th, 2020
Gene Product: August 12th, 2016
Variation: May 13th, 2012
Gene Model: June 19th, 2014
40 days agorad51a recombination protein51 gene a: one of two loci producing cDNA homologous to yeast protein required with Dmc1 protein for meiotic homologous recombination
7.04
GRMZM2G121543
Nan, G et al. 2011. BMC Plant Biology 11:120     Reference: September 15th, 2020
Gene Product: August 12th, 2016
Variation: April 19th, 2012
Gene Model: June 19th, 2014
40 days agocyc12 cyclin12: encodes part of the "CDK8" module that mediates transcription initiation with RNA Polymerase II
7.03
GRMZM2G408242
Nunez-Rios, T et al. 2020. Int J Dev Biol pp.doi: 10.1387/ijdb.200098sg     Reference: September 15th, 2020
Gene Product: June 26th, 2009
Variation: December 29th, 2016
Gene Model: December 29th, 2016
41 days agomyb42 myb transcription factor 42: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.09
   Sa, KJ et al. 2020. Genomics & Informatics 18:e26   LOC_Os08g43550 (MSU/TIGR) Reference: September 14th, 2020
Gene Product: February 16th, 2011
Variation: November 7th, 2017
41 days agoa2 anthocyaninless2: like a1, but red pericarp with P1-rr
5.03
   Sa, KJ et al. 2020. Genomics & Informatics 18:e26     Reference: September 14th, 2020
Gene Product: June 7th, 2012
Variation: September 1st, 2003
41 days agob1 colored plant1: dominant B1 plants have anthocyanin in major plant tissues; some alleles affect aleurone and embryo color; regulates flavonoid enzymes; SSR umc1776
2.03
GRMZM2G172795
Sa, KJ et al. 2020. Genomics & Informatics 18:e26     Reference: September 14th, 2020
Gene Product: October 13th, 2010
Variation: February 14th, 2013
Gene Model: September 22nd, 2011
41 days agobz1 bronze1: modifies purple aleurone and plant color to pale or reddish brown; anthers yellow-fluorescent; allele bz1-m4 = sh1-bz1-m4; SSR phi017NCBI: UDPG-flavonoid 3-oxy glucosyl transferase
9.02
   Sa, KJ et al. 2020. Genomics & Informatics 18:e26     Reference: September 14th, 2020
Gene Product: July 4th, 2018
Variation: July 13th, 2020
41 days agoc2 colorless2: colorless aleurone, reduced plant and cob color; C2-Idf dominant inhibitor; duplicate factor with whp1 for pollen color and for anthocyanins
4.08
   Sa, KJ et al. 2020. Genomics & Informatics 18:e26     Reference: September 14th, 2020
Gene Product: September 1st, 2003
Variation: November 14th, 2013
41 days agohm1 Helminthosporium carbonum susceptibility1: disease lesions vs. yellowish flecks (Hm1, resistant) on leaves with Cochliobolus carbonum race 1
1.06
   Sa, KJ et al. 2020. Genomics & Informatics 18:e26     Reference: September 14th, 2020
Gene Product: May 23rd, 2014
Variation: September 1st, 2003
41 days agolc1 red leaf color1: dominant Lc1 confers anthocyanin in coleoptile, nodes, auricle, leaf blade, etc. (compare Sn1 and Hopi1); displaced r1 gene
10.06
GRMZM5G822829
Sa, KJ et al. 2020. Genomics & Informatics 18:e26     Reference: September 14th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: October 23rd, 2018
41 days agopl1 purple plant1: Pl1 plant tissues have light-independent pigment, pl1 blue light-dependent; Pl1-Bh1, colored patches in c1 aleurone and in plant; transcriptional activator for flavonoid genes; SSR phi031, nc009, nc010. umc1014
6.04
   Sa, KJ et al. 2020. Genomics & Informatics 18:e26     Reference: September 14th, 2020
Gene Product: June 16th, 2015
Variation: March 28th, 2013
41 days agor1 colored1: regulates anthocyanin pathway; dominant R1 (S element) confers function in aleurone; dominants represented by R1-r or r1-r (P element) confer function in anthers, leaf tip, brace roots, etc.
10.06
   Sa, KJ et al. 2020. Genomics & Informatics 18:e26     Reference: September 14th, 2020
Gene Product: October 13th, 2010
Variation: January 6th, 2018
41 days agochi1 chalcone flavanone isomerase1: genomic sequence, gene-specific probe, transcript defined by S1-nuclease protection analysis
1.11
GRMZM2G155329
Sa, KJ et al. 2020. Genomics & Informatics 18:e26     Reference: September 14th, 2020
Gene Product: May 8th, 2012
Variation: October 10th, 2012
Gene Model: May 9th, 2012
41 days agofht1 flavanone 3-hydroxylase1: (aka f3h) single copy cDNA similar to Antirrhinum homologsimilar to Naringenin,2-oxoglutarate 3-dioxygenase of A. thaliana
2.01 - 2.02
   Sa, KJ et al. 2020. Genomics & Informatics 18:e26     Reference: September 14th, 2020
Gene Product: June 8th, 2012
Variation: September 1st, 2003
41 days agohsp27 heat shock protein27:
 
GRMZM2G335242
Kim, J-T et al. 2020. Appl Biochem 63:54     Reference: September 14th, 2020
Gene Product: January 15th, 2019
Gene Model: September 14th, 2020
41 days agohsp28 heat shock protein28:
 
GRMZM2G098167
Kim, J-T et al. 2020. Appl Biochem 63:54     Reference: September 14th, 2020
Gene Product: January 15th, 2019
Gene Model: September 14th, 2020
41 days agoIDP158  :
3.09
GRMZM2G175076
Sa, KJ et al. 2020. Genomics & Informatics 18:e26     Reference: September 14th, 2020
Variation: March 31st, 2005
Gene Model: February 25th, 2019
43 days agomst1 modifier of R1-st1: dominant Mst1 reduces mutability of R1-st
10.06
   Gavazzi, G et al. 1990. Genetics 125:193-199     Reference: September 1st, 2003
Variation: September 12th, 2020
44 days agoserk2 somatic embryogenesis receptor-like kinase2: a single copy DNA with homology to carrot and Arabidopsis SERK genes;SSR umc2304
5.05
   Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z   AT1G71830 (TAIR)
LOC_Os04g38480 (MSU/TIGR)
Reference: September 11th, 2020
Gene Product: September 1st, 2003
Variation: June 11th, 2015
Recommended by Ed Coe:
January 8th, 2008
44 days agogst2 glutathione S-transferase2: safener-induced; heterodimer; 2 map sites have been reported on chr 8 and 10
10.03
GRMZM2G132093
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Variation: July 7th, 2010
Gene Model: October 29th, 2015
44 days agortcs1 rootless concerning crown and seminal roots1: root system reduced solely to a primary root yet plants can be carried to seed; cyclin cDNAs absent; naphthalene acetic acid induces adventitious roots
1.02
GRMZM2G092542
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: October 5th, 2009
Variation: October 5th, 2009
Gene Model: July 23rd, 2013
44 days agonec2 necrotic2: green seedling develops necrotic lesions at 2-3 leaf stage; lethal; accumulates divinyl chlorophyllides a an b and may be the dvr1 gene.
1.04
   Govindjee et al. 2020. Plant Physiology Reports doi: 10.1007/s40502-020-00534-4     Reference: September 11th, 2020
Variation: September 11th, 2020
44 days agohscf1 heat shock complementing factor1: cDNA with 2 APETALA2-like binding domains
9.03
GRMZM2G139082
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Variation: December 22nd, 2012
Gene Model: July 28th, 2016
44 days agogst5 glutathione transferase5: cDNA, safener-induced; high activity with fluorodifen herbicide
1.11
GRMZM2G308687
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Variation: July 22nd, 2010
Gene Model: July 27th, 2016
44 days agogst6 glutathione transferase6: cDNA, functionally expressed in E. coli
7.01
GRMZM2G129357
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Variation: July 22nd, 2010
Gene Model: July 27th, 2016
44 days agogst7 glutathione transferase7: cDNA, functionally expressed in E. coli
3.05
GRMZM2G028556
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Variation: August 9th, 2010
Gene Model: July 27th, 2016
44 days agochn2 chitinase2: acidic chitinase I, based on cDNA sequence similarity; Southern blots suggest multiple copies
6.01
   Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
44 days agoabi3 ABI3-VP1-transcription factor 3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.Grimault et al named this locus ZmAFL4 by homology to Arabidopsis, 2015
 
   Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: July 29th, 2015
44 days agoereb53 AP2-EREBP-transcription factor 53: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z   LOC_Os1g67410 (MSU/TIGR) Reference: September 11th, 2020
Gene Product: July 5th, 2019
44 days agowox5a WUSCHEL-homeobox-transcription factor 5A: embryonic WUSCHEL homeobox transcription factor (Nardmann et al 2007)
 
   Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: August 25th, 2017
44 days agowox5b WUSCHEL-homeobox-transcription factor 5b: embryonic transcription factor (Nardmann et al 2007)
 
   Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: August 25th, 2017
44 days agoaic1 auxin import carrier1: cDNA encoding a protein with a deduced amino acid showing 73% identity to AtAUX1.
1.05
GRMZM2G129413
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z   AT2G21050 (TAIR) Reference: September 11th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: November 21st, 2015
44 days agoserk1 somatic embryogenesis receptor-like kinase1: single copy cDNA with 79% sequence identity with serk2, and significant sequence homology to carrot and Arabidopsis SERK genes;
10.04 - 10.05
GRMZM5G870959
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Variation: January 25th, 2015
Gene Model: January 25th, 2015
44 days agoserk3 somatic embryogenesis receptor-like kinase3: a single copy cDNA;
4.05
GRMZM2G150024
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Variation: July 31st, 2013
Gene Model: June 11th, 2015
44 days agogst8 glutathione transferase8:
 
GRMZM2G156877
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Gene Model: July 27th, 2016
44 days agogst11 glutathione transferase11:
1.01
GRMZM2G119499
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Gene Model: July 27th, 2016
44 days agogst18 glutathione transferase18:
3.05
GRMZM2G019090
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Variation: August 17th, 2010
Gene Model: October 22nd, 2014
44 days agogst19 glutathione transferase19:
6.04
GRMZM2G335618
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Variation: August 18th, 2010
Gene Model: July 27th, 2016
44 days agogst21 glutathione transferase21:
3.05
GRMZM2G428168
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Variation: August 18th, 2010
Gene Model: April 18th, 2017
44 days agogst22 glutathione transferase22:
10.04
GRMZM2G330635
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Variation: August 18th, 2010
Gene Model: April 18th, 2017
44 days agogst29 glutathione transferase29:
3.05
GRMZM2G127789
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Gene Model: July 27th, 2016
44 days agogst30 glutathione transferase30:
1.04
GRMZM2G044383
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Variation: August 21st, 2010
Gene Model: July 27th, 2016
44 days agogst31 glutathione transferase31: glutathione S-transferase subunit 31; matches PCO132874 (in silico from AF244696) placed by overgo on chromosome 1
1.01
GRMZM2G475059
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Variation: August 21st, 2010
Gene Model: April 27th, 2016
44 days agogst32 glutathione transferase32:
1.04
GRMZM2G041685
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Gene Model: July 27th, 2016
44 days agogst37 glutathione transferase37:
7.04
GRMZM2G178079
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Gene Model: July 27th, 2016
44 days agogst42 glutathione transferase42:
1.04
GRMZM2G025190
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Gene Model: July 27th, 2016
44 days agomads1 MADS1: transcripts detected in egg cells and invivo zygotes of maize, also expressed in synergids and antipodal cells. during flower development expressed in all ear spikelet organ primordia at intermediate stages
9.07
   Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Variation: April 15th, 2008
44 days agochn3 chitinase3: acidic chitinase I by cDNA sequence similarity; Southern blots suggest single or low copy number
5.03
   Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
44 days agolec1 LEC1 transcription factor1:
5.06
GRMZM2G011789
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: August 9th, 2016
Gene Model: April 8th, 2011
44 days agoaic3 auxin import carrier3: part of gene family that maintains auxin distribution pattern against environmental or developmental influences
1.03
GRMZM2G149481
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: April 19th, 2017
Gene Model: April 19th, 2017
44 days agozag6 agamous-like6: Encodes a MADS-box transcription factor homologous to SUPPRESSOR OF OVEREXPRESSION OF CONSTANS 1 that affects flowering time in Arabidopsis.
 
GRMZM2G026223
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Variation: June 9th, 2014
Gene Model: June 9th, 2014
44 days agoatl1 auxin transporter-like1: mutant tassels have reduced branch numbers; bald tip on ears with fewer spikelets per row, and agravitropic root growth
 
GRMZM2G127949
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z   AT2G38120 (TAIR)
LOC_Os01g63770 (MSU/TIGR)
Reference: September 11th, 2020
Gene Product: April 19th, 2017
Variation: April 19th, 2017
Gene Model: March 12th, 2015
44 days agogst46 glutathione transferase46:
 
GRMZM2G480439
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Gene Model: September 11th, 2020
44 days agogst47 glutathione transferase47:
 
GRMZM2G161827
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Gene Model: September 11th, 2020
44 days agogst48 glutathione transferase48:
 
GRMZM2G056388
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: September 1st, 2003
Gene Model: September 11th, 2020
44 days agoglp2 germin-like protein2:
 
GRMZM2G045809
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: December 24th, 2015
Gene Model: September 11th, 2020
44 days agopin2 PIN-formed protein2: see pin1
5.06
GRMZM2G074267
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: April 21st, 2014
Variation: June 11th, 2007
Gene Model: June 7th, 2012
44 days agoyuc5 Yucca5: transcribed in the root apex (0-5mm)
7.02
GRMZM2G132489
Ding, MQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01066-z     Reference: September 11th, 2020
Gene Product: June 18th, 2018
Gene Model: June 17th, 2016
45 days agopro1 proline responding1: (allele o6) crumpled opaque kernel; green-striped lethal seedling; responds to proline in culture
8.04
GRMZM2G375504
Altuntas, C; Terzi, R. 2020. Phyton Int J Exp Bot 89:487-495     Reference: September 10th, 2020
Gene Product: March 19th, 2015
Variation: September 18th, 2018
Gene Model: June 22nd, 2014
45 days agoao1 aldehyde oxidase1: functionally cloned (Sekimoto et al 1997)
1.11
GRMZM2G141535
Altuntas, C; Terzi, R. 2020. Phyton Int J Exp Bot 89:487-495     Reference: September 10th, 2020
Gene Product: May 2nd, 2012
Variation: May 30th, 2012
Gene Model: October 4th, 2014
46 days agoscro1 scarecrow1: mRNA expressed in endodermis and quiescent center of root, influencing radial pattern
4.08
GRMZM2G131516
Hughes, TE; Langdale, JA. 2020. Plant Direct. doi: 10.1002/pld3.264     Reference: September 9th, 2020
Gene Product: June 24th, 2019
Variation: June 24th, 2019
Gene Model: November 11th, 2012
Recommended by Ed Coe:
January 25th, 2007
46 days agoms45 male sterile45: abnormal microspore wall formation, tassel specific, cDNA clone
9.06
   Cigan, AM et al. 2005. Plant J 43:929-940     Reference: September 9th, 2020
Gene Product: June 27th, 2014
Variation: June 27th, 2014
46 days agogras37 GRAS-transcription factor 37: In double mutants with scro1, most leaf veins are separated by one rather than two mesophyll cells Hughes et al., 2019)
 
   Hughes, TE; Langdale, JA. 2020. Plant Direct. doi: 10.1002/pld3.264     Reference: September 9th, 2020
Gene Product: June 24th, 2019
Variation: June 24th, 2019
46 days agosmk7 small kernel7: mutants have small kernels, but normal composition of storage proteins
 
   Zhao, HL et al. 2020. Plant Physiol 184:359-373     Reference: September 9th, 2020
Gene Product: June 26th, 2020
Variation: June 26th, 2020
46 days agowrky126 WRKY-transcription factor 126: candidate gene for stem architecture
 
GRMZM5G851490
Shang, QQ et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01062-3     Reference: September 9th, 2020
Gene Product: July 24th, 2017
Gene Model: September 9th, 2020
46 days agochls1 chalcone synthase1: Gene regulated by anther-specific promoter 5126
 
GRMZM2G108894
Cigan, AM et al. 2005. Plant J 43:929-940     Reference: September 9th, 2020
Gene Product: September 1st, 2003
Gene Model: September 9th, 2020
46 days agodfr1 dihydroflavonoid reductase1: male sterile; identification to potential function based on GenBank and TIGR annotations
7.03 - 7.02
GRMZM2G004683
Cigan, AM et al. 2005. Plant J 43:929-940     Reference: September 9th, 2020
Gene Product: November 21st, 2012
Variation: November 21st, 2012
Gene Model: November 21st, 2012
47 days agovpp5 vacuolar-type H+-pyrophosphatase5: variants affect drought tolerance
 
GRMZM2G170927
Jia, T-J et al. 2020. J Int Agr 19:2177-2187   AT1G15690 (TAIR)
LOC_Os02g09150 (MSU/TIGR)
Reference: September 8th, 2020
Gene Product: August 16th, 2016
Variation: August 16th, 2016
Gene Model: August 16th, 2016
47 days agolysm1 lysin motif domain protein1: ortholog of OsAM3 (rice arbuscular mycorrhizal3)
 
GRMZM2G135244
Nadal, M et al. 2017. Nature Plants 3:17073   LOC_Os01g57400 (MSU/TIGR) Reference: September 7th, 2020
Gene Product: September 8th, 2020
Gene Model: September 7th, 2020
48 days agorth3 roothair defective3: like rth1, but "stocking cap" roothair initials under electron microscope
1.03
   Ma, XM et al. 2020. Ann Bot pp.doi: 10.1093/aob/mcaa159     Reference: September 7th, 2020
Variation: June 30th, 2012
48 days agopht6 phosphate transporter protein6:
 
GRMZM5G881088
Ma, XM et al. 2020. Ann Bot pp.doi: 10.1093/aob/mcaa159     Reference: September 7th, 2020
Gene Product: June 16th, 2016
Variation: June 17th, 2020
Gene Model: May 27th, 2015
48 days agopht8 phosphate transporter protein8:
 
GRMZM2G009779
Ma, XM et al. 2020. Ann Bot pp.doi: 10.1093/aob/mcaa159     Reference: September 7th, 2020
Gene Product: June 16th, 2016
Gene Model: June 16th, 2016
48 days agonope1 no perception1 : mutant is defective in early rhizosphere signalling
 
GRMZM2G176737
Nadal, M et al. 2017. Nature Plants 3:17073   LOC_Os04g01520 (MSU/TIGR) Reference: September 7th, 2020
Gene Product: September 7th, 2020
Variation: September 7th, 2020
Gene Model: September 7th, 2020
51 days agopzb01301  :
10.02
   LI, HW et al. 2020. Plant Physiol Biochem 155:756-768     Reference: September 4th, 2020
Variation: December 31st, 2017
51 days agobk2 brittle stalk2: brittle plant parts after 4-leaf stage
9.04 - 9.05
GRMZM2G109326
LI, HW et al. 2020. Plant Physiol Biochem 155:756-768     Reference: September 4th, 2020
Gene Product: March 6th, 2012
Variation: March 6th, 2012
Gene Model: March 5th, 2012
51 days agolhcb3 light harvesting chlorophyll a/b binding protein3: probed by clone provided by L. Bogorad (aka cab4)
8.03
   LI, HW et al. 2020. Plant Physiol Biochem 155:756-768     Reference: September 4th, 2020
Gene Product: January 8th, 2005
Variation: August 20th, 2014
51 days agolhcb7 light harvesting complex mesophyll7: cDNA sequence distinct from other light harvesting chlorophyll polypeptides; two copies by Southern blot analysis (aka cab-m7)
6.07
   LI, HW et al. 2020. Plant Physiol Biochem 155:756-768     Reference: September 4th, 2020
Gene Product: January 8th, 2005
Variation: January 5th, 2013
51 days agoltpg1 glycosylphosphatidylinositol-anchored lipid protein transfer1: NCBI: putative bifunctional inhibitor/LTP/seed storage protein family
1.06
GRMZM2G083725
LI, HW et al. 2020. Plant Physiol Biochem 155:756-768     Reference: September 4th, 2020
Gene Product: September 1st, 2003
Variation: December 2nd, 2016
Gene Model: December 2nd, 2016
52 days agoal9 aleurone9: aleurone specific cDNA, unknown function
8.08
GRMZM2G091006
Linnestad, C et al. 2003. US Pat Off pp.US 2003/0097.689 A1     Reference: September 3rd, 2020
Variation: October 14th, 2009
Gene Model: January 14th, 2016
52 days agokn1 knotted1: dominant Kn1 plants have localized proliferation of tissue at vascular bundles on leaf
1.10
   Crisp, PA et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2010250117     Reference: September 3rd, 2020
Variation: December 6th, 2013
52 days agomc1 mucronate1: dominant Mc1 kernels have opaque endospermendosperm-specific protein cDNA
2.06
GRMZM2G060429
Li, CB, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00352     Reference: September 3rd, 2020
Gene Product: September 17th, 2010
Variation: September 16th, 2010
Gene Model: August 4th, 2018
52 days agoo2 opaque endosperm2: like o1; high lysine content; regulates b-32 protein (see rip1); reduced lysine degradation (lysine-ketoglutaric reductase); SSRs phi057, 112
7.01
   Li, CB, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00352     Reference: September 3rd, 2020
Gene Product: September 1st, 2003
Variation: June 6th, 2016
52 days agora1 ramosa1: ear and tassel many-branched; tassel branches taper to tip
7.02
   Crisp, PA et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2010250117     Reference: September 3rd, 2020
Gene Product: April 11th, 2007
Variation: August 20th, 2010
52 days agodzs10 delta zein structural10: [was Zps10/(22)]; high (22.5%) methionine 10kDa delta zein; RFLP (probe 10kZ-1)
9.03 - 9.03
   Li, CB, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00352     Reference: September 3rd, 2020
Gene Product: September 1st, 2003
Variation: November 21st, 2012
52 days agohb122 Homeobox-transcription factor 122: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, N et al. 2020. Frontiers Plant Sci 11:1298     Reference: September 3rd, 2020
Gene Product: August 25th, 2017
52 days agofea4 fasciated ear4: Mutants are semidwarfed with fasciated ears and tassels as well as greatly enlarged vegetative and inflorescence meristems.
 
   Crisp, PA et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2010250117     Reference: September 3rd, 2020
Gene Product: August 21st, 2018
Variation: July 7th, 2017
52 days agozmm16 Zea mays MADS16: single copy; orthologous to rice GLO-like gene, OSMADS2; strongly expressed in developing male and female inflorescences but wealky expressed indeveloping kernels.
3.06
   Qi, S et al. 2020. Gene pp.doi: 10.1016/j.gene.2020.145064   AT5G20240 (TAIR) Reference: September 3rd, 2020
Gene Product: April 1st, 2011
Variation: November 2nd, 2015
52 days agozmm18 Zea mays MADS18: single copy gene that co-segregates and shares 97% sequence identity with zmm29; probably an ortholog of rice GLOBOSA-like gene, OSMADS4; expressed in male and female inflorescences and developing kernels.
8.03
GRMZM5G805387
Qi, S et al. 2020. Gene pp.doi: 10.1016/j.gene.2020.145064     Reference: September 3rd, 2020
Gene Product: September 1st, 2003
Variation: August 27th, 2013
Gene Model: July 2nd, 2014
52 days agozmm29 Zea mays MADS29: single copy gene that co-segregates and shares 97% nt sequence identity with zmm18; probably an ortholog of rice GLOBOSA-like gene, OSMADS4; strongly expressed in male and female inflorescences and developing kernels.
8.03
GRMZM2G152862
Qi, S et al. 2020. Gene pp.doi: 10.1016/j.gene.2020.145064     Reference: September 3rd, 2020
Gene Product: September 1st, 2003
Variation: August 27th, 2013
Gene Model: July 2nd, 2014
52 days agohsp26 heat shock protein26: was umc195; cDNA, single mRNA species induced by heat shock, in vitro HSP26 imported by isolated chloroplasts, cross-reacts with anti-pea-chloroplast-HSP21 antibodies
1.03
GRMZM2G149647
Wang, N et al. 2020. Frontiers Plant Sci 11:1298     Reference: September 3rd, 2020
Gene Product: September 1st, 2003
Variation: January 30th, 2015
Gene Model: January 30th, 2015
52 days agozp27 27-kDa zein protein: proline rich; least abundant of zeins in endosperm, not clear if all in zp27 cluster
7.02
   Li, CB, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00352     Reference: September 3rd, 2020
Gene Product: September 17th, 2010
Variation: December 10th, 2019
52 days agoole1 oleosin1: major protein from lipid bodies, cDNA and genomic clones; SSR umc1185
2.03
   Wang, N et al. 2020. Frontiers Plant Sci 11:1298     Reference: September 3rd, 2020
Gene Product: July 23rd, 2018
Variation: February 20th, 2015
52 days agode30 defective endosperm B30: dominant De*-B30 has opaque, high lysine endosperm
7.01 - 7.02
AF546188.1_FG007
Li, CB, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00352     Reference: September 3rd, 2020
Gene Product: September 1st, 2003
Variation: September 15th, 2014
Gene Model: September 14th, 2014
52 days agoimp1 importin1: leaf cDNA csu244 similar to importin
8.03
   Li, CB, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00352     Reference: September 3rd, 2020
Gene Product: September 1st, 2003
Variation: July 7th, 2017
52 days agogz50 50kD gamma zein: endosperm-specific protein cDNA
7.02
GRMZM2G138689
Li, CB, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00352     Reference: September 3rd, 2020
Gene Product: September 22nd, 2010
Variation: September 16th, 2010
Gene Model: November 21st, 2014
52 days agoaz22z3 22kD alpha zein3: mRNA for 22kD zein; in z1c(zp22) cluster
4.01
GRMZM2G044625
Li, CB, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00352     Reference: September 3rd, 2020
Gene Product: September 1st, 2003
Variation: May 31st, 2010
Gene Model: November 21st, 2014
52 days agosweet15b sugars will eventually be exported transporter15b: similar to senescence-associated protein 29 of A. thaliana
 
GRMZM5G872392
Qi, S et al. 2020. Gene pp.doi: 10.1016/j.gene.2020.145064     Reference: September 3rd, 2020
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
52 days agozp2 zein protein2: encodes a 19 kD alpha zein
 
AF546188.1_FG005
Li, CB, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00352     Reference: September 3rd, 2020
Gene Product: September 1st, 2003
Gene Model: August 1st, 2016
52 days agohsp9 heat shock protein9:
 
GRMZM2G046382
Wang, N et al. 2020. Frontiers Plant Sci 11:1298     Reference: September 3rd, 2020
Gene Product: January 15th, 2019
Gene Model: January 14th, 2019
52 days agorfwd3 ring finger and WD40 repeat3: mutants decrease zein transcription and seed nutrient reserves
 
GRMZM2G085691
Li, CB, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00352     Reference: September 3rd, 2020
Gene Product: March 26th, 2020
Variation: July 23rd, 2020
Gene Model: July 23rd, 2020
52 days agoltp2 lipid transfer protein2:
9.03
GRMZM2G040689
Wang, N et al. 2020. Frontiers Plant Sci 11:1298   AT2G10940 (TAIR) Reference: September 3rd, 2020
Gene Product: September 1st, 2003
Gene Model: June 20th, 2020
53 days agocdpk11 calcium dependent protein kinase11: encodes a protein that functions in abscisic acid signaling upstream of the MAP kinase encoded by mpk2, aka MPK5 (Ding et al 2012)
 
GRMZM2G047486
Abraham-Juarez, M-J et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00300     Reference: September 2nd, 2020
Gene Product: July 9th, 2013
Variation: April 3rd, 2015
Gene Model: July 9th, 2013
54 days agoae1 amylose extender1: glassy, tarnished endosperm; high amylose content; application: highly linear starch is used for food films, fibers, and other industrial purposes
5.04
   Gustin, JL et al. 2013. J Agric Food Chem 61:10872-10880     Reference: September 1st, 2020
Gene Product: June 6th, 2011
Variation: March 20th, 2020
54 days agobt1 brittle endosperm1: mature kernel collapsed, angular, often translucent and brittle (alleles sh3, sh5)
5.04
   Gustin, JL et al. 2013. J Agric Food Chem 61:10872-10880     Reference: September 1st, 2020
Gene Product: February 24th, 2015
Variation: March 16th, 2018
54 days agobt2 brittle endosperm2: like bt1; endosperm ADPG pyrophosphorylase subunit; with sh2 complements E. coli glgC
4.05
   Gustin, JL et al. 2013. J Agric Food Chem 61:10872-10880     Reference: September 1st, 2020
Gene Product: November 4th, 2014
Variation: December 4th, 2018
54 days agodu1 dull endosperm1: glassy, tarnished endosperm; encodes a starch synthase III, that with an isoamylase-type debranching enzyme represses accumulation of phytoglycogen
10.03
GRMZM2G141399
Gustin, JL et al. 2013. J Agric Food Chem 61:10872-10880     Reference: September 1st, 2020
Gene Product: October 14th, 2016
Variation: June 29th, 2015
Gene Model: February 28th, 2012
54 days agofl1 floury endosperm1: (was o4) endosperm opaque, soft; dosage effect with fl1-ref allele, but o4 allele is recessive
2.04
GRMZM2G094532
Gustin, JL et al. 2013. J Agric Food Chem 61:10872-10880     Reference: September 1st, 2020
Gene Product: July 8th, 2013
Variation: September 16th, 2010
Gene Model: July 8th, 2013
54 days agofl2 floury2: endosperm opaque, soft; dosage effect; encodes an abnormal 24kDa alpha-zein, blocked in removal of its signal peptide, preventing transfer to lumen of the endoplasmic reticulummRNA for 22kD zein; in z1c(zp22) cluster
4.03
GRMZM2G397687
Gustin, JL et al. 2013. J Agric Food Chem 61:10872-10880     Reference: September 1st, 2020
Gene Product: September 1st, 2003
Variation: October 17th, 2014
Gene Model: December 19th, 2011
54 days agoga1 gametophyte factor1: (was ga9) Ga1 pollen grains are competitively superior to ga1 on Ga1 silks; Ga1-S (strong) super-gametophyte
4.02 - 4.03
   Lu, YX et al. 2020. Plant Reproduction pp.doi: 10.1007/s00497-020-00394-w     Reference: September 1st, 2020
Variation: June 22nd, 2005
54 days agoga2 gametophyte factor2: Ga2 pollen grains are competitively superior to ga2 on Ga2 silks.
5.04
   Lu, YX et al. 2020. Plant Reproduction pp.doi: 10.1007/s00497-020-00394-w     Reference: September 1st, 2020
Variation: September 29th, 2016
54 days agoh1 soft starch1: endosperm opaque, starchy (like floury), recessive to horny
3.04
   Gustin, JL et al. 2013. J Agric Food Chem 61:10872-10880     Reference: September 1st, 2020
Variation: September 1st, 2003
54 days agosh2 shrunken2: inflated, transparent, sweet kernels collapse on drying, becoming angular and brittle; endosperm ADPG pyrophosphorylase subunit (compare bt2); application: "supersweet" sweet corn - kernels sugar-sweet for long period
3.09
   Gustin, JL et al. 2013. J Agric Food Chem 61:10872-10880     Reference: September 1st, 2020
Gene Product: November 4th, 2014
Variation: January 9th, 2019
54 days agosu1 sugary1: endosperm wrinkled and translucent when dry; starch debranching enzyme I absent in developing endosperm, phytoglycogen but no debranching enzyme in germinating seeds; su1-am sugary-amylaceous; su1-st recessive starchy; application: the "sweet corn" gene - recessive kernels are creamy-sweet at milk stage
4.05
   Gustin, JL et al. 2013. J Agric Food Chem 61:10872-10880     Reference: September 1st, 2020
Gene Product: April 21st, 2016
Variation: June 6th, 2016
54 days agosu2 sugary2: endosperm glassy, translucent, sometimes wrinkled
6.04 - 6.05
   Gustin, JL et al. 2013. J Agric Food Chem 61:10872-10880     Reference: September 1st, 2020
Gene Product: October 14th, 2016
Variation: October 7th, 2010
54 days agow3 white seedling3: like vp2; w3-8686 pale endosperm, pale green seedling in dim light
2.08 - 2.07
GRMZM2G113476
Gustin, JL et al. 2013. J Agric Food Chem 61:10872-10880   AT3G11945 (TAIR) Reference: September 1st, 2020
Gene Product: January 8th, 2018
Variation: January 8th, 2018
Gene Model: January 8th, 2018
54 days agoy9 pale yellow9: pale endosperm, slightly viviparous; green to pale green seedlings and plants; accumulates 9,15,9'-tri-cis-zeta carotene in dark
10.03 - 10.03
GRMZM2G011746
Gustin, JL et al. 2013. J Agric Food Chem 61:10872-10880     Reference: September 1st, 2020
Gene Product: December 10th, 2011
Variation: September 28th, 2011
Gene Model: September 22nd, 2011
54 days agotcb1 teosinte crossing barrier1: Barrier to crossing of maize onto Central Plateau teosinte - transferred to maize with linked positive modifiers, fails to accept any pollen, including Ga1-s
4.04
   Lu, YX et al. 2020. Plant Reproduction pp.doi: 10.1007/s00497-020-00394-w     Reference: September 1st, 2020
Gene Product: September 10th, 2018
Variation: May 24th, 2019
54 days agonrt5 nitrate transport5:
 
GRMZM2G455124
Liu, RR et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1815980     Reference: September 1st, 2020
Gene Product: September 1st, 2003
Gene Model: May 21st, 2019
55 days agolg1 liguleless1: In the liguleless1 mutant, ligule and auricle are missing; leaves are upright
2.01
   Kolkman, JM, et al. 2020. G3. 0:doi: 10.1534/g3.120.401500     Reference: August 31st, 2020
Gene Product: December 18th, 2014
Variation: August 17th, 2020
55 days agoftr1 ferredoxin-thioredoxin1: cDNA sequence
9.01
GRMZM2G122793
Sytykiewicz, H et al. 2020. Int J Mol Sci 21:6296     Reference: August 31st, 2020
Gene Product: August 31st, 2020
Variation: September 2nd, 2015
Gene Model: September 2nd, 2015
55 days agomatl1 matrilineal1: encodes a pollen-specific phospholipase; novel edits lead to a 6.7% haploid induction rate
 
GRMZM2G471240
Gustin, JL et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12857     Reference: August 31st, 2020
Gene Product: June 12th, 2020
Variation: February 10th, 2017
Gene Model: January 25th, 2017
55 days agotrx1 thioredoxin1: upregulated in lines more resistant to aphid-infestation in seedlings
 
GRMZM2G166877
Sytykiewicz, H et al. 2020. Int J Mol Sci 21:6296     Reference: August 31st, 2020
Gene Product: August 31st, 2020
Gene Model: August 31st, 2020
55 days agotrx2 thioredoxin2: upregulated in lines more resistant to aphid-infestation in seedlings
 
GRMZM2G082886
Sytykiewicz, H et al. 2020. Int J Mol Sci 21:6296     Reference: August 31st, 2020
Gene Product: August 31st, 2020
Gene Model: August 31st, 2020
55 days agotrx3 thioredoxin3: upregulated in lines more resistant to aphid-infestation in seedlings
 
GRMZM2G170008
Sytykiewicz, H et al. 2020. Int J Mol Sci 21:6296     Reference: August 31st, 2020
Gene Product: August 31st, 2020
Gene Model: August 31st, 2020
55 days agotrx4 thioredoxin4: upregulated in lines more resistant to aphid-infestation in seedlings
 
GRMZM5G892522
Sytykiewicz, H et al. 2020. Int J Mol Sci 21:6296     Reference: August 31st, 2020
Gene Product: August 31st, 2020
Gene Model: August 31st, 2020
55 days agotrx5 thioredoxin5: upregulated in lines more resistant to aphid-infestation in seedlings
 
GRMZM2G086779
Sytykiewicz, H et al. 2020. Int J Mol Sci 21:6296     Reference: August 31st, 2020
Gene Product: August 31st, 2020
Gene Model: August 31st, 2020
55 days agotrxr1 thioredoxin reductase1: upregulated in lines more resistant to aphid-infestation in seedlings
 
GRMZM5G841142
Sytykiewicz, H et al. 2020. Int J Mol Sci 21:6296     Reference: August 31st, 2020
Gene Product: August 31st, 2020
Gene Model: August 31st, 2020
55 days agotrxr2 thioredoxin reductase2:
 
GRMZM5G889769
    Gene Product: August 31st, 2020
Gene Model: August 31st, 2020
55 days agocda3 cytidine deaminase3:
 
GRMZM2G008297
Xu, JH; Messing, J. 2006. BMC Genetics. 7:52     Reference: August 26th, 2008
Gene Product: August 26th, 2008
Gene Model: August 31st, 2020
55 days agodcl102 dicer-like 102: mutants have few or no 24-nt phasiRNAs; plants are temperature-sensitive male sterile
1.07
GRMZM2G413853
Teng, C, et al. 2020. Nature communications. 11:2912     Reference: August 31st, 2020
Gene Product: September 5th, 2006
Variation: June 9th, 2020
Gene Model: January 29th, 2015
60 days agohsp17.2 heat shock protein17.2: seedling expressed heat shock protein; cDNA sequence similar to other plant 18 kDa heat shock proteins but distinct in maize
3.04
GRMZM2G422240
Li, ZX et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00260.     Reference: August 26th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: March 3rd, 2015
60 days agohsftf13 HSF-transcription factor 13: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Li, ZX et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00260.     Reference: August 26th, 2020
Gene Product: May 15th, 2020
60 days agocol16 C2C2-CO-like-transcription factor 16:
1.06
GRMZM2G159996
Li, ZX et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00260.     Reference: August 26th, 2020
Gene Product: June 18th, 2018
Variation: December 7th, 2016
Gene Model: December 7th, 2016
60 days agohsp19 heat shock protein19:
9.06
GRMZM2G024718
Li, ZX et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00260.     Reference: August 26th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: February 28th, 2018
60 days agohsp90 heat shock protein, 90 kDa: heat-induced; encoded protein interacts with HSP101
10.04
GRMZM5G833699
Li, ZX et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00260.     Reference: August 26th, 2020
Gene Product: January 14th, 2019
Variation: September 1st, 2003
Gene Model: November 3rd, 2014
60 days agohsp18c heat shock protein18c: induced by heat shock specifically in anthers or spikelets containing meiotic microsporocytes
8.02
   Li, ZX et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00260.     Reference: August 26th, 2020
Gene Product: September 1st, 2003
Variation: January 2nd, 2013
60 days agosal1 supernumerary aleurone1: Mutant allele contains up to seven layers of aleurone cells
9.03
   Li, ZX et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00260.     Reference: August 26th, 2020
Variation: April 3rd, 2007
60 days agohsp6 heat shock protein6:
 
AC209784.3_FG007
Li, ZX et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00260.     Reference: August 26th, 2020
Gene Product: September 1st, 2003
Gene Model: January 14th, 2019
60 days agohsp11 heat shock protein11:
 
GRMZM2G306679
Li, ZX et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00260.     Reference: August 26th, 2020
Gene Product: January 15th, 2019
Gene Model: January 14th, 2019
60 days agohsp12 heat shock protein12:
 
GRMZM2G158232
Li, ZX et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00260.     Reference: August 26th, 2020
Gene Product: January 15th, 2019
Gene Model: January 14th, 2019
60 days agocrt4 calreticulin4:
 
GRMZM2G074687
Li, ZX et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00260.     Reference: August 26th, 2020
Gene Product: February 12th, 2007
Gene Model: August 26th, 2020
60 days agophao1 pheophorbide a oxygenase1:
 
GRMZM2G171390
Li, ZX et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00260.     Reference: August 26th, 2020
Gene Product: August 26th, 2020
Gene Model: August 26th, 2020
60 days agonye1 non-yellowing1:
 
GRMZM2G091837
Li, ZX et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00260.     Reference: August 26th, 2020
Gene Product: August 26th, 2020
Gene Model: August 26th, 2020
60 days agonye2 non-yellowing2:
 
GRMZM2G379563
Li, ZX et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00260.     Reference: August 26th, 2020
Gene Product: August 26th, 2020
Gene Model: August 26th, 2020
60 days agohsp20 heat shock protein20:
 
GRMZM2G346839
Li, ZX et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00260.     Reference: August 26th, 2020
Gene Product: January 15th, 2019
Gene Model: August 26th, 2020
60 days agohsp23 heat shock protein23:
 
GRMZM2G361605
Li, ZX et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00260.     Reference: August 26th, 2020
Gene Product: September 1st, 2003
Gene Model: August 26th, 2020
60 days agochao1 chlorophyllide a oxygenase1:
 
GRMZM2G103197
Li, ZX et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00260.     Reference: August 26th, 2020
Gene Product: August 26th, 2020
Gene Model: August 26th, 2020
60 days agocdj4 chaperone DNA J4:
 
GRMZM2G399136
Li, ZX et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00260.     Reference: August 26th, 2020
Gene Product: September 1st, 2003
Gene Model: August 26th, 2020
60 days agohsp24 heat shock protein24:
 
GRMZM2G375517
Li, ZX et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00260.     Reference: August 26th, 2020
Gene Product: January 15th, 2019
Gene Model: August 26th, 2020
60 days agobzip60 bZIP transcription factor60: endoplasmic reticulum [ER] stress response
9.03
GRMZM2G025812
Li, ZX et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00260.     Reference: August 26th, 2020
Variation: August 26th, 2020
Gene Model: April 16th, 2013
60 days agopcr1 protochlorophyllide reductase1: leaf cDNA csu349 similar to plant protochlorophyllide reductase
2.01
GRMZM2G084958
Li, ZX et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00260.     Reference: August 26th, 2020
Gene Product: June 8th, 2019
Variation: February 25th, 2013
Gene Model: October 8th, 2014
62 days agozpu1 pullulanase-type starch debranching enzyme1: single copy, cDNA clone similar to rice sequence; SSR umc1003The zpu1 gene encodes a pullulanase-type starch debranching enzyme. Analysis of plants homozygous for the zpu1-204 mutation reveal the genes role in starch catabolism. zpu1-204 endosperm accumulate maltooligosaccharides not found in wild type plants. zpu1-204 are also deficient for linear maltooligosaccharides.
2.05
GRMZM2G158043
Zhong, YY et al. 2020. Carbohydrate Polymers 247:116681     Reference: August 24th, 2020
Gene Product: October 25th, 2011
Variation: June 29th, 2015
Gene Model: November 20th, 2014
62 days agogbss1 granule-bound starch synthase1:
 
GRMZM2G008263
Zhong, YY et al. 2020. Carbohydrate Polymers 247:116681     Reference: August 24th, 2020
Gene Product: June 4th, 2008
Variation: August 4th, 2011
Gene Model: November 20th, 2014
62 days agosbe1 starch branching enzyme1: maize kernel cDNA sequence is similar to starch branching enzyme I of bacteria, encodes a putative 64-amino acid plastid transit peptide (aka sbe1)
5.03
   Zhong, YY et al. 2020. Carbohydrate Polymers 247:116681     Reference: August 24th, 2020
Gene Product: September 1st, 2003
Variation: January 5th, 2018
62 days agohcf60 high chlorophyll fluorescence60: green to pale green seedling leaves, deficiency in photosystem I
 
GRMZM2G038013
Zhang, Y et al. 2020. Int J Mol Sci 21:6082     Reference: August 24th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: February 17th, 2015
62 days agosu4 sugary4: duplicate factor: in combination with su3 gives sugary endosperm phenotype.
6.05
GRMZM2G090905
Zhong, YY et al. 2020. Carbohydrate Polymers 247:116681     Reference: August 24th, 2020
Gene Product: October 25th, 2011
Variation: June 3rd, 2011
Gene Model: October 24th, 2011
62 days agoss1 starch synthase I: single copy endosperm specific cDNA; encoded-protein cross-reacts with antibody to granule associated starch synthase I
9.02
   Zhong, YY et al. 2020. Carbohydrate Polymers 247:116681     Reference: August 24th, 2020
Gene Product: October 14th, 2016
Variation: October 7th, 2010
64 days agoact1 actin1: actin, one of six potential genes; genomic DNA clone; 3 introns); SSR phi115
8.03 - 8.04
   Manoli, A et al. 2012. J Plant Physiol 169:807-815     Reference: August 22nd, 2020
Gene Product: September 1st, 2003
Variation: September 4th, 2013
64 days agorpl19 ribosomal protein L19: single copy cDNA
5.06
GRMZM2G171444
Bruggeman, SA et al. 2020. PLoS One pp.e0237715     Reference: August 22nd, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: July 28th, 2016
64 days agobm4 brown midrib4: mutant looks like bm1; encodes folylpolyglutamate synthetase
9.08
GRMZM2G393334
Manoli, A et al. 2012. J Plant Physiol 169:807-815     Reference: August 22nd, 2020
Gene Product: December 17th, 2014
Variation: December 17th, 2014
Gene Model: December 17th, 2014
64 days agopgm2 phosphoglucomutase2: electrophoretic mobility; null allele is known; cytosolic; monomeric
5.01
GRMZM2G109383
Manoli, A et al. 2012. J Plant Physiol 169:807-815     Reference: August 22nd, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: November 28th, 2011
64 days agotua4 alpha tubulin4: belongs to alpha tubulin subfamily I, with tua1 and tua2; gene specific cDNA probe
5.01
   Bertels, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa385     Reference: August 22nd, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
64 days agogst24 glutathione transferase24:
5.07
GRMZM2G032856
Bruggeman, SA et al. 2020. PLoS One pp.e0237715     Reference: August 22nd, 2020
Gene Product: September 1st, 2003
Variation: August 20th, 2010
Gene Model: July 27th, 2016
64 days agowee1 wee1: cDNA single copy, deduced protein 50% identity to protein kinase domain of human Wee1; SSR umc1255
4.11
GRMZM5G878541
Bertels, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa385     Reference: August 22nd, 2020
Variation: March 21st, 2017
Gene Model: March 17th, 2017
64 days agocyc3 cyclin3: classIII; sense RNA functions in Xenopus oocytes; SSR umc1186
6.02
   Bertels, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa385     Reference: August 22nd, 2020
Gene Product: June 26th, 2009
Variation: January 17th, 2014
64 days agouce4 ubiquitin conjugating enzyme4:
2.01
   Manoli, A et al. 2012. J Plant Physiol 169:807-815     Reference: August 22nd, 2020
Gene Product: December 19th, 2019
Variation: July 29th, 2004
64 days agoopr2 12-oxo-phytodienoic acid reductase2: Cytoplasmic
8.05
GRMZM2G000236
Bruggeman, SA et al. 2020. PLoS One pp.e0237715     Reference: August 22nd, 2020
Gene Product: September 3rd, 2010
Variation: December 11th, 2013
Gene Model: November 27th, 2013
64 days agoaox3 alternative oxidase3:
 
GRMZM2G074743
Bruggeman, SA et al. 2020. PLoS One pp.e0237715     Reference: August 22nd, 2020
Gene Product: February 22nd, 2012
Gene Model: February 17th, 2012
64 days agoga2ox3 gibberellin 2-oxidase3:
 
GRMZM2G022679
Bruggeman, SA et al. 2020. PLoS One pp.e0237715     Reference: August 22nd, 2020
Gene Product: October 27th, 2014
Gene Model: October 27th, 2014
64 days agohct2 hydroxycinnamoyltransferase2: up-regulated in the Rp1-D21 mutant lines; colocalized with the SNP associated with Rp1-D21-induced HR
 
GRMZM2G114918
Bruggeman, SA et al. 2020. PLoS One pp.e0237715     Reference: August 22nd, 2020
Gene Product: November 7th, 2015
Gene Model: November 7th, 2015
64 days agomcm4 minichromosome maintenance4:
 
GRMZM2G066101
Bertels, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa385     Reference: August 22nd, 2020
Gene Product: August 2nd, 2017
Gene Model: July 31st, 2017
64 days agouce9 ubiquitin conjugating enzyme9:
 
GRMZM2G027378
Bertels, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa385     Reference: August 22nd, 2020
Gene Product: December 19th, 2019
Gene Model: May 10th, 2018
64 days agocul2 cullin2:
 
GRMZM2G166694
Manoli, A et al. 2012. J Plant Physiol 169:807-815     Reference: August 22nd, 2020
Gene Product: May 10th, 2018
Gene Model: May 10th, 2018
64 days agolug9 leunig-related9:
 
GRMZM2G425377
Manoli, A et al. 2012. J Plant Physiol 169:807-815     Reference: August 22nd, 2020
Gene Product: October 23rd, 2018
Gene Model: July 3rd, 2020
64 days agoIDP610  :
2.09
GRMZM2G152258
Bruggeman, SA et al. 2020. PLoS One pp.e0237715     Reference: August 22nd, 2020
Variation: March 31st, 2005
Gene Model: February 20th, 2019
65 days agodek605 defective kernel605: mutants have delayed seed and seedling development
5.05
GRMZM2G114241
Fan, KJ et al. 2020. Plant Cell Physiol pp.doi: 10.1093/pcp/pcaa110     Reference: August 21st, 2020
Gene Product: December 27th, 2016
Variation: August 21st, 2020
Gene Model: July 10th, 2018
65 days agotrkin1 tandem repeat kinesin1: required to mobilize neocentromeres
 
   Swentowsky, KW et al. 2020. Genes Dev pp.doi: 10.1101/gad.340679.120     Reference: August 21st, 2020
Gene Product: November 10th, 2017
65 days agokindr1 kinesin driver1: on Ab10; encodes a kinesin-14 required to mobilize neo-centromeres; made up of the major tandem repeat knob180.
 
   Swentowsky, KW et al. 2020. Genes Dev pp.doi: 10.1101/gad.340679.120     Reference: August 21st, 2020
Gene Product: November 10th, 2017
67 days agocpps2 copalyl diphosphate synthase2: encodes ent-kaurene synthase, a copalyl diphosphate synthase protein having close identity with An1 gene product; likely duplicate function explains why an1 plants are not fully dwarfed (Harris et al. 2005)
1.04
GRMZM2G044481
Toyomasu, T et al. 2020. Plant Cell Physiol pp.doi: 10.1093/pcp/pcaa106     Reference: August 19th, 2020
Gene Product: August 16th, 2012
Variation: January 22nd, 2018
Gene Model: September 12th, 2011
Recommended by Ed Coe:
January 8th, 2008
67 days agoan1 anther ear1: andromonoecious dwarf, intermediate stature; few tassel branches; responds to gibberellins; an1-6923 includes deletion of Bz2+
1.08
GRMZM2G081554
Toyomasu, T et al. 2020. Plant Cell Physiol pp.doi: 10.1093/pcp/pcaa106     Reference: August 19th, 2020
Gene Product: August 16th, 2012
Variation: May 13th, 2020
Gene Model: November 7th, 2011
67 days agohcf3 high chlorophyll fluorescence3: (aka hcf9, hcf107) missing PSII thylakoid membrane core complex; green seedling; RNA metabolism
1.03
GRMZM2G121960
Chotewutmontri, P; Barkan, A. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2007833117     Reference: August 19th, 2020
Gene Product: December 1st, 2015
Variation: August 19th, 2020
Gene Model: December 1st, 2015
67 days agopsa3 photosystemI3: Mutants have a pale green seedling phenotype; lacks photosystem I core complex polypeptides
 
GRMZM2G051403
Chotewutmontri, P; Barkan, A. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2007833117   AT3G55250 (TAIR) Reference: August 19th, 2020
Gene Product: May 20th, 2017
Variation: May 20th, 2017
Gene Model: May 20th, 2017
67 days agopet2 photosynthetic electron transport2: lacks cytochrome bf polypeptidesOrtholog of Arabidopsis HCF208 and Chlamydomonas CCB2. Cyt b6 heme attachment factor. (A. Barkan, 2015)
 
GRMZM2G087063
Chotewutmontri, P; Barkan, A. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2007833117   At5g52110 (TAIR)
LOC_Os10g37840 (MSU/TIGR)
Os10g0522500 (Gramene)
Reference: August 19th, 2020
Gene Product: April 19th, 2011
Variation: August 19th, 2020
Gene Model: April 19th, 2011
67 days agocrp1 chloroplast RNA processing1: Chloroplast PPR protein. Activates translation of petA and psaC genes. Stabilizes petB-petD intergenic RNA termini. Binds petA, psaC, petD 5'UTRs. (A. Barkan, 2015)pale green seedling lethal, high chlorophyll leaf fluorescence;cytochromeb6/f and PSI deficient; protein translation
7.03 - 7.06
   Chotewutmontri, P; Barkan, A. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2007833117   AT5G42310 (TAIR)
LOC_Os07g36390 (MSU/TIGR)
Os07g0548300 (Gramene)
Reference: August 19th, 2020
Gene Product: December 27th, 2016
Variation: July 23rd, 2009
67 days agonta1 N-terminal amidase1: NCBI: CemA-like proton extrusion protein-related
9.08
GRMZM2G110258
Chotewutmontri, P; Barkan, A. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2007833117   At4g34090 (TAIR)
LOC_Os03g01920 (MSU/TIGR)
Reference: August 19th, 2020
Variation: August 18th, 2020
Gene Model: April 21st, 2017
67 days agotps1 terpene synthase1: possible plant defense gene
2.02
GRMZM2G049538
Toyomasu, T et al. 2020. Plant Cell Physiol pp.doi: 10.1093/pcp/pcaa106     Reference: August 19th, 2020
Gene Product: May 28th, 2012
Variation: August 6th, 2013
Gene Model: May 28th, 2012
67 days agocpps3 copalyl diphosphate synthase3: Functions as a (+)-CPP synthase
 
GRMZM2G068808
Toyomasu, T et al. 2020. Plant Cell Physiol pp.doi: 10.1093/pcp/pcaa106     Reference: August 19th, 2020
Gene Product: August 16th, 2012
Gene Model: October 27th, 2014
67 days agoks1 kaurene synthase1:
 
GRMZM2G016922
Toyomasu, T et al. 2020. Plant Cell Physiol pp.doi: 10.1093/pcp/pcaa106     Reference: August 19th, 2020
Gene Product: August 16th, 2012
Gene Model: October 27th, 2014
67 days agoks2 kaurene synthase2:
 
GRMZM2G093526
Toyomasu, T et al. 2020. Plant Cell Physiol pp.doi: 10.1093/pcp/pcaa106     Reference: August 19th, 2020
Gene Product: August 16th, 2012
Gene Model: October 27th, 2014
67 days agoks4 kaurene synthase4:
 
AC214360.3_FG001
Toyomasu, T et al. 2020. Plant Cell Physiol pp.doi: 10.1093/pcp/pcaa106     Reference: August 19th, 2020
Gene Product: August 16th, 2012
Gene Model: October 27th, 2014
67 days agoks6 kaurene synthase6:
 
GRMZM2G391312
Toyomasu, T et al. 2020. Plant Cell Physiol pp.doi: 10.1093/pcp/pcaa106     Reference: August 19th, 2020
Gene Product: August 16th, 2012
Gene Model: December 2nd, 2015
67 days agocpps4 copalyl diphosphate synthase4: Produces 8,13-CPP and LPP; moderately inducible expression under root exposure to abiotic stress
 
AC218998.2_FG011
Toyomasu, T et al. 2020. Plant Cell Physiol pp.doi: 10.1093/pcp/pcaa106     Reference: August 19th, 2020
Gene Product: August 16th, 2012
Gene Model: November 9th, 2018
67 days agoks3 kaurene synthase3: functionality inferred from expression data and sequence similarity (Song et al 2011; Nelissen et al 2012)
2.02
GRMZM2G093603
Toyomasu, T et al. 2020. Plant Cell Physiol pp.doi: 10.1093/pcp/pcaa106     Reference: August 19th, 2020
Gene Product: August 16th, 2012
Gene Model: August 15th, 2012
68 days agosbp9 SBP-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.01
   Liu, Y et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00389     Reference: August 18th, 2020
Gene Product: July 5th, 2019
68 days agoadc1 arginine decarboxylase1:
9.03
GRMZM2G396553
Gao, CH et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1807722     Reference: August 18th, 2020
Gene Product: August 18th, 2020
Variation: September 1st, 2003
Gene Model: March 7th, 2018
68 days agosam2 S-adenosyl methionine decarboxylase2: leaf cDNA, csu6
2.04
   Gao, CH et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1807722     Reference: August 18th, 2020
Gene Product: September 1st, 2003
Variation: July 13th, 2013
68 days agopao1 polyamine oxidase1: cDNA and genomic clones, low copy numberplays an important role in tumor development during the maize-U. maydis interaction
10.03
GRMZM2G034152
Gao, CH et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1807722     Reference: August 18th, 2020
Gene Product: June 10th, 2020
Variation: October 7th, 2015
Gene Model: October 7th, 2015
68 days agoadc2 arginine decarboxylase2:
4.06
   Gao, CH et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1807722     Reference: August 18th, 2020
Gene Product: August 18th, 2020
Variation: September 25th, 2007
68 days agopao3 polyamine oxidase3:
 
GRMZM2G396856
Gao, CH et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1807722     Reference: August 18th, 2020
Gene Product: June 10th, 2020
Gene Model: June 9th, 2020
68 days agospms1 spermine synthase1: up-regulated by salt stress
 
GRMZM2G047867
Gao, CH et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1807722     Reference: August 18th, 2020
Gene Product: June 19th, 2020
Gene Model: June 19th, 2020
68 days agospds3 spermidine synthase3:
 
GRMZM2G120578
Gao, CH et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1807722     Reference: August 18th, 2020
Gene Product: June 19th, 2020
Gene Model: August 18th, 2020
68 days agosam3 S-adenosylmethionine decarboxylase3:
 
GRMZM2G060369
Gao, CH et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1807722     Reference: August 18th, 2020
Gene Product: September 1st, 2003
Gene Model: August 18th, 2020
68 days agopao7 polyamine oxidase7:
 
   Gao, CH et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1807722     Reference: August 18th, 2020
Gene Product: June 10th, 2020
68 days agoodc1 ornithine decarboxylase 1:
 
GRMZM2G140824
Gao, CH et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1807722     Reference: August 18th, 2020
Gene Product: March 19th, 2008
Variation: March 19th, 2008
Gene Model: August 18th, 2020
69 days agoadh1 alcohol dehydrogenase1: electrophoretic mobility; null alleles are known; dimeric; intra/interlocus hybrid bands occur); SSR umc1726
1.10
   He, KH et al. 2020. Mol Breed 40:83     Reference: August 17th, 2020
Gene Product: July 8th, 2009
Variation: March 22nd, 2006
69 days agocpn1 chaperonin 1: cDNA sequence homologous to hsp60 family; 2 copies
5.03
GRMZM2G458208
He, KH et al. 2020. Mol Breed 40:83     Reference: August 17th, 2020
Gene Product: September 1st, 2003
Variation: May 20th, 2015
Gene Model: May 20th, 2015
69 days agonlp9 NLP-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
10.04
GRMZM2G105004
He, KH et al. 2020. Mol Breed 40:83     Reference: August 17th, 2020
Gene Product: December 3rd, 2019
Variation: July 29th, 2004
Gene Model: October 21st, 2018
69 days agoamt1 ammonium transporter1:
 
GRMZM2G175140
He, KH et al. 2020. Mol Breed 40:83     Reference: August 17th, 2020
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
69 days agomha3 membrane H(+)-ATPase3:
 
GRMZM2G104325
He, KH et al. 2020. Mol Breed 40:83     Reference: August 17th, 2020
Gene Product: September 1st, 2003
Variation: January 22nd, 2016
Gene Model: January 22nd, 2016
69 days agoaatr1 amino acid transporter1: candidate gene for nitrogen use efficiency
 
GRMZM2G108597
He, KH et al. 2020. Mol Breed 40:83     Reference: August 17th, 2020
Gene Product: August 17th, 2020
Gene Model: August 17th, 2020
75 days agonut1 necrotic upper tips1: Ac-tagged mutation, necrotic upper leaf tips and blasted tassel.
 
GRMZM2G041668
Dong, ZB et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2005014117   AT1G12260 (TAIR)
LOC_Os06g01480 (MSU/TIGR)
Reference: August 11th, 2020
Gene Product: July 8th, 2019
Variation: August 11th, 2020
Gene Model: November 15th, 2017
79 days agomha2 plasma-membrane H+ATPase2: cDNA sequence similar to plant plasma-membrane [H+]-ATPase and distinct from mha1
2.02
   Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Variation: May 13th, 2009
79 days agomyb75 MYB-transcription factor 75: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also
1.04
   Wang, D, et al. 2020. Genetics. 0:doi: 10.1534/genetics.120.303264     Reference: August 7th, 2020
Variation: September 25th, 2007
79 days agomha8 membrane H(+)-ATPase8:
9.02
GRMZM2G455557
Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Gene Model: June 15th, 2020
79 days agomha13 membrane H(+)-ATPase13:
1.09
   Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: September 1st, 2003
79 days agogt1 grassy tillers1: numerous basal branches; vegetatively totipotent in combination with id1 and factors for perennialismputative transcription factor that reduces branching, and is induced by shade
1.04
GRMZM2G005624
Sun, YH, et al. 2020. Genome Biol. 21:143     Reference: August 7th, 2020
Gene Product: March 5th, 2012
Variation: August 18th, 2011
Gene Model: March 5th, 2012
79 days agodhn2 dehydrin2: polymorphic protein in embryos of some inbredssimilar to Arabidopsis dehydrin Rab18
9.03
GRMZM2G098750
Castorina, G, et al. 2020. Plant Physiol. 0:doi: 10.1104/pp.20.00322     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Gene Model: October 12th, 2018
79 days agosk1 silkless ears1: pistils abort, no silks
2.03 - 2.04
GRMZM2G021786
Sun, YH, et al. 2020. Genome Biol. 21:143   AT3G22250 (TAIR)
LOC_Os04g44354 (MSU/TIGR)
Reference: August 7th, 2020
Gene Product: September 24th, 2018
Variation: August 21st, 2018
Gene Model: October 31st, 2016
79 days agote1 terminal ear1: stalked ear appendages at tip; varying to infolded ears
3.05
   Sun, YH, et al. 2020. Genome Biol. 21:143     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Variation: July 24th, 2017
79 days agots1 tassel seed1: tassel pistillate and pendant; if removed, small ear with irregular kernel placement develops
2.04 - 2.05
   Sun, YH, et al. 2020. Genome Biol. 21:143     Reference: August 7th, 2020
Gene Product: January 3rd, 2018
Variation: September 5th, 2019
79 days agots2 tassel seed2: like ts1, but tassel branches variably pistillate and staminate; sequence homologous to short chain alcohol dehydrogenases; SSR phi001
1.03
   Sun, YH, et al. 2020. Genome Biol. 21:143     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
79 days agotu1 tunicate1: dominant Tu1 ears develop long glumes enclosing individual kernels; tassels develop large, coarse glumes and sex reversal; both inflorescences become grossly vegetative and sterile in homozygotes
4.08 - 4.08
GRMZM2G370777
Sun, YH, et al. 2020. Genome Biol. 21:143     Reference: August 7th, 2020
Gene Product: June 12th, 2012
Variation: February 3rd, 2011
Gene Model: May 9th, 2012
79 days agoub3 unbranched3: double mutant shows decrease in tassel branch number
 
   Sun, YH, et al. 2020. Genome Biol. 21:143     Reference: August 7th, 2020
Gene Product: July 5th, 2019
Variation: December 17th, 2014
79 days agomha4 proton-exporting ATPase4:
10.07
GRMZM2G006894
Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Variation: December 14th, 2017
Gene Model: December 14th, 2017
79 days agotga1 teosinte glume architecture1: glumes indurated, erect, long, boat-shaped; factor transferred from teosinte
4.05
GRMZM2G101511
Sun, YH, et al. 2020. Genome Biol. 21:143     Reference: August 7th, 2020
Gene Product: July 5th, 2019
Variation: May 7th, 2015
Gene Model: October 28th, 2011
79 days agotip1 tonoplast intrinsic protein1: tip1 cDNA is 1097 bp long, including the 93 bp leader sequence. Its derived amino acid sequence has 76% identity with the tonoplast aquaporin from Arabidopsis.
10.04
GRMZM2G168439
Devi, MJ; Reddy, VR. 2020. Plant Physiol Biochem 154:714-722     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: February 5th, 2015
79 days agoelfa9 elongation factor 1-alpha9: shares 89-99% nucleotide sequence identity with genes elf1a to alf1g (aka clones eEF1Aa to eEF1Ag).
9.03
GRMZM2G153541
Castorina, G, et al. 2020. Plant Physiol. 0:doi: 10.1104/pp.20.00322     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Variation: April 14th, 2014
Gene Model: April 15th, 2014
79 days agopip2g plasma membrane intrinsic protein2:
 
   Devi, MJ; Reddy, VR. 2020. Plant Physiol Biochem 154:714-722     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
79 days agomha1 membrane H(+)-ATPase1: cDNA and genomic sequences similar to plant plasma membrane proton-translocating ATPase, major band in Southerns; partly contained in Bs-1 retroelement; SSR umc1207
2.09
GRMZM2G144821
Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Variation: February 20th, 2007
Gene Model: January 22nd, 2016
79 days agofdl1 fused leaves1: coleoptile-first or first-second leaves fused at epidermis, curly
7.04
GRMZM2G056407
Castorina, G, et al. 2020. Plant Physiol. 0:doi: 10.1104/pp.20.00322     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Variation: February 13th, 2020
Gene Model: September 12th, 2018
79 days agoaos1 allene oxide synthase1: expression induction by herbivory and methyl jasmonate
9.06
GRMZM2G067225
Sun, YH, et al. 2020. Genome Biol. 21:143     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Variation: September 24th, 2010
Gene Model: October 29th, 2015
79 days agocct2 CO CO-LIKE TIMING OF CAB1 protein domain2: photoperiod response locus; confers later flowering in teosintes under longer day lengths; knockout mutant causes early flowering under long days
 
GRMZM2G004483
Sun, YH, et al. 2020. Genome Biol. 21:143     Reference: August 7th, 2020
Gene Product: June 18th, 2018
Variation: December 27th, 2017
Gene Model: December 27th, 2017
79 days agonsa1 Na+ content under saline-alkaline conditions1: involved in Na+ homeostasis; mutants promote root Na+ efflux
 
GRMZM2G000397
Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: January 10th, 2020
Variation: January 10th, 2020
Gene Model: January 10th, 2020
79 days agomha5 membrane H(+)-ATPase5:
 
GRMZM2G341058
Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2020
79 days agomha6 membrane H(+)-ATPase6:
 
GRMZM2G008122
Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2020
79 days agomha7 membrane H(+)-ATPase7:
 
GRMZM2G148374
Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2020
79 days agomha10 membrane H(+)-ATPase10:
 
GRMZM2G131309
Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2020
79 days agomha11 membrane H(+)-ATPase11:
 
GRMZM2G172183
Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2020
79 days agomha12 membrane H(+)-ATPase12:
 
GRMZM2G035520
Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2020
79 days agomha9 membrane H(+)-ATPase9:
 
AC209050.3_FG001
Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2020
79 days agoaos5 allene oxide synthesis5:
 
GRMZM2G033098
Sun, YH, et al. 2020. Genome Biol. 21:143     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Gene Model: March 19th, 2020
80 days agolw1 lemon white1: white seedling, pale yellow endosperm; some alleles have zebra or luteus phenotypes
1.10
GRMZM2G027059
Mlotshwa, S et al. 2020. Plant Direct. doi: 10.1002/pld3.224     Reference: August 6th, 2020
Gene Product: June 20th, 2012
Variation: March 10th, 2016
Gene Model: January 8th, 2014
80 days agoccha1 chloroplast-localized potential Ca2+/H+ antiporter1: encodes a chloroplast-localized Mn2+ or Ca2+ transporter
 
GRMZM2G464891
Wang, CJ et al. 2020. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2020.08.002   At1g64150 (TAIR) Reference: August 6th, 2020
Gene Product: August 6th, 2020
Variation: August 6th, 2020
Gene Model: August 6th, 2020
81 days agofat2 fatty acyl-ACP thioesterase2:
9.02
GRMZM5G829544
Li, L, et al. 2011. PLoS One. 6:e24699   AT1G08510 (TAIR) Reference: August 5th, 2020
Gene Product: May 23rd, 2012
Variation: May 23rd, 2012
Gene Model: May 23rd, 2012
Recommended by Lin Li:
May 24th, 2012
81 days agoo10 opaque endosperm10: like o1
 
GRMZM2G346263
Yao, DS, et al. 2016. PLoS Genetics. 12:e1006270     Reference: August 5th, 2020
Gene Product: August 20th, 2016
Variation: August 20th, 2016
Gene Model: August 20th, 2016
81 days agopx3 peroxidase3: electrophoretic mobility, anodal; monomeric; widely distributed in tissues
7.05 - 7.06
GRMZM2G427815
Li, YS, et al. 2020. 11:881     Reference: August 5th, 2020
Gene Product: September 18th, 2015
Variation: August 11th, 2015
Gene Model: August 11th, 2015
81 days agotan1 tangled1: (was py1) leaves short, pointed, fine white streaks; displays abnormally oriented cell divisions and altered growth and development throughout the plant
6.05
   Martinez, P, et al. 2020. J Cell Biol. 219:e201907184     Reference: August 5th, 2020
Variation: June 29th, 2005
81 days agoiaa11 Aux/IAA-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.04
GRMZM2G167794
Li, YS, et al. 2020. 11:881     Reference: August 5th, 2020
Variation: September 1st, 2003
Gene Model: April 2nd, 2018
81 days agomlks2 Maize LINC KASH AtSINE-like2: required for normal male meiosis and pollen development and normal stomatal complex development
 
GRMZM2G000608
Gumber, HK, et al. 2019. Nucleus. 10:144-166     Reference: August 5th, 2020
Gene Product: December 7th, 2019
Variation: June 22nd, 2019
Gene Model: June 7th, 2018
81 days agogst25 glutathione transferase25:
9.08
GRMZM2G161905
Li, YS, et al. 2020. 11:881     Reference: August 5th, 2020
Gene Product: September 1st, 2003
Gene Model: July 27th, 2016
81 days agogst34 glutathione transferase34:
 
GRMZM2G145069
Li, YS, et al. 2020. 11:881     Reference: August 5th, 2020
Gene Product: September 1st, 2003
Gene Model: April 18th, 2017
81 days agohsftf11 HSF-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.11
GRMZM2G132971
Li, YS, et al. 2020. 11:881   AT2G26150 (TAIR) Reference: August 5th, 2020
Gene Product: May 15th, 2020
Gene Model: October 13th, 2017
81 days agoemb14 embryo defective 14: mutant has defective embryo; unlinked suppressor(s) give an albino seedling phenotype
 
GRMZM2G384293
Li, C-L; Shen, Y; Meeley, RB; McCarty, DR; Tan, BC. 2015. Plant J. 84:785-799   AT3G47450 (TAIR)
LOC_Os02g01440 (MSU/TIGR)
Reference: August 5th, 2020
Gene Product: July 5th, 2013
Variation: October 13th, 2015
Gene Model: July 1st, 2013
81 days agoga20ox6 gibberellin 20-oxidase6:
 
GRMZM2G127232
Li, YS, et al. 2020. 11:881     Reference: August 5th, 2020
Gene Product: October 28th, 2014
Gene Model: July 6th, 2020
82 days agoder1 derlin1: endoplasmic reticulum-associated degradation protein
8.04
GRMZM2G117388
Kanodia, P et al. 2020. Plant Direct. doi: 10.1002/pld3.241     Reference: August 4th, 2020
Variation: June 11th, 2012
Gene Model: December 22nd, 2015
Recommended by Ed Coe:
May 1st, 2007
82 days agobip1 Binding protein homolog1: cDNA clone, protein body, putative molecular chaperone of hsp70 family
5.03
   Kanodia, P et al. 2020. Plant Direct. doi: 10.1002/pld3.241     Reference: August 4th, 2020
Gene Product: September 1st, 2003
Variation: October 30th, 2012
82 days agopab2 polyA binding protein2:
 
GRMZM2G102829
Kanodia, P et al. 2020. Plant Direct. doi: 10.1002/pld3.241     Reference: August 4th, 2020
Gene Product: August 4th, 2020
Gene Model: August 4th, 2020
82 days agopdi13 protein disulfide isomerase13:
 
GRMZM2G376542
Kanodia, P et al. 2020. Plant Direct. doi: 10.1002/pld3.241     Reference: August 4th, 2020
Gene Product: September 1st, 2003
Gene Model: August 4th, 2020
82 days agoconr1 concentric ring1: mutants have a 'concentric ring' leaf lesion phenotype
2.04
GRMZM2G014695
Kim, SB et al. 2020. Plant J pp.doi: 10.1111/tpj.14945     Reference: August 4th, 2020
Variation: August 4th, 2020
Gene Model: March 15th, 2020
83 days agoad1 adherent1: seedling leaves, tassel branches, and occasionally top leaves adhere
1.08
GRMZM2G167438
Liu, X et al. 2020. New Phytol pp.doi: 10.1111/nph.16837     Reference: August 3rd, 2020
Gene Product: November 1st, 2018
Variation: February 13th, 2020
Gene Model: February 13th, 2020
83 days agogi2 gigantea2: homologous to Arabidopsis photoperiod gene gigantea.
3.03
GRMZM5G844173
Du, XM et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12849     Reference: August 3rd, 2020
Gene Product: September 19th, 2012
Variation: September 18th, 2012
Gene Model: September 18th, 2012
83 days agolfy1 leafy1: dominant Lfy1 plants have increased number of leaves above ear
 
   Du, XM et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12849     Reference: August 3rd, 2020
Variation: September 24th, 2015
83 days agolhcb6 light harvesting chlorophyll a/b binding protein6:
 
GRMZM2G092427
Long, L et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa366     Reference: August 3rd, 2020
Gene Product: January 8th, 2005
Variation: October 8th, 2010
Gene Model: October 9th, 2015
83 days agopsb3 photosystem II3:
4.04
GRMZM2G174984
Long, L et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa366     Reference: August 3rd, 2020
Variation: April 14th, 2015
Gene Model: April 14th, 2015
83 days agokcs15 3-ketoacyl-CoA synthase15: NCBI: fatty acid elongase
1.08
GRMZM2G162508
Liu, X et al. 2020. New Phytol pp.doi: 10.1111/nph.16837     Reference: August 3rd, 2020
Gene Product: November 1st, 2018
Variation: November 4th, 2016
Gene Model: November 4th, 2016
83 days agozmm15 Zea mays MADS-box 15:
5.01
GRMZM2G553379
Du, XM et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12849     Reference: August 3rd, 2020
Variation: June 15th, 2018
Gene Model: June 15th, 2018
83 days agopsbB (cp)  :
 
GRMZM5G808939
Long, L et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa366     Reference: August 3rd, 2020
Gene Product: September 1st, 2003
Gene Model: June 16th, 2020
83 days agodlf1 delayed flowering1: tall late plant with additional nodes and leaves at flowering; no apparent response to day length
 
   Du, XM et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12849     Reference: August 3rd, 2020
Gene Product: August 21st, 2018
Variation: June 25th, 2020
83 days agopsa6 photosystem I reaction center6: leaf cDNA csu67, similar to barley photosystem I subunit
7.01
GRMZM2G012397
Long, L et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa366     Reference: August 3rd, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: January 8th, 2015
83 days agoploc1 plastocyanin homolog1: leaf cDNA csu257, similar to plastocyanin
6.01
GRMZM2G071450
Long, L et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa366     Reference: August 3rd, 2020
Gene Product: September 1st, 2003
Variation: August 18th, 2018
Gene Model: August 19th, 2018
83 days agooec17 oxygen evolving complex, 17kDa homolog: leaf cDNA csu229 similar to plant oxygen evolving complex polypeptide
7.03
GRMZM2G058070
Long, L et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa366     Reference: August 3rd, 2020
Gene Product: September 1st, 2003
Variation: July 18th, 2012
Gene Model: September 11th, 2018
83 days agofkf2 flavin-binding kelch repeat f-box2: Involved in regulating the circadian clock and photoperiodic flowering
 
GRMZM2G106363
Du, XM et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12849     Reference: August 3rd, 2020
Gene Product: July 25th, 2017
Gene Model: December 12th, 2017
83 days agokcs16 3-ketoacyl-CoA synthase16:
 
GRMZM2G160417
Liu, X et al. 2020. New Phytol pp.doi: 10.1111/nph.16837     Reference: August 3rd, 2020
Gene Product: November 1st, 2018
Gene Model: February 13th, 2020
83 days agopspb2 photosystem II oxygen evolving polypeptide2: sequence highly similar to OEC23 oxygen evolving complex protein of photosystem II; located peripheral to lumenal side of thylakoid (Huang et al 2013)
7.01
GRMZM2G047954
Long, L et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa366     Reference: August 3rd, 2020
Gene Product: September 1st, 2003
Variation: March 31st, 2005
Gene Model: January 30th, 2019
83 days agolhcb5 light harvesting chlorophyll a/b binding protein5:
2.08
GRMZM2G149428
Long, L et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa366     Reference: August 3rd, 2020
Variation: February 19th, 2015
Gene Model: February 19th, 2015
85 days agoczog2 cis-zeatin O-glucosyltransferase2: enzymatic activity like that of czog1 but high in roots and low in kernels; 97.8% identity at amino acid level
8.07
GRMZM2G110511
Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: March 20th, 2014
Variation: March 25th, 2009
Gene Model: March 21st, 2014
Recommended by Marty Sachs:
March 7th, 2007
85 days agorrb3 retinoblastoma family3:
 
GRMZM2G033828
Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Variation: January 26th, 2011
Gene Model: April 17th, 2015
85 days agodek1 defective kernel1: germless; colorless (mosaic) aleurone; floury white endosperm; anthocyanins and carotenoids absent; cultured embryos not obtained (aka clf1, gay1)
1.03
   Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: September 1st, 2003
Variation: September 8th, 2018
85 days agohb75 Homeobox-transcription factor 75: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.02
GRMZM2G001289
Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Variation: September 1st, 2003
Gene Model: February 6th, 2018
85 days agodof3 DNA binding with one finger3: cDNA sequence distinct from dof1, dof2
6.01
GRMZM2G179069
Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: September 1st, 2003
Variation: April 18th, 2008
Gene Model: August 29th, 2013
85 days agocr4 crinkly4: crinkly seedling leaves; plants short with rough, sometimes knot-bearing, extremely crinkly leaves and club tassel; aleurone mosaic
10.02
   Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: September 1st, 2003
Variation: July 17th, 2006
85 days agothk1 thick aleurone1: Mutants have a thick aleurone phenotype; encodes a NOT1 subunit of the CCR4-NOT complex
 
   Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: August 1st, 2020
Variation: August 1st, 2020
85 days agotubtf8 TUB-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: September 29th, 2015
85 days agoocl4 outer cell layer4:
1.05 - 1.06
   Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: September 1st, 2003
Variation: December 6th, 2019
85 days agoczog1 cis-zeatin O-glucosyltransferase1: gene intronless, genomic and cDNA sequences identical (Martin et al., 2001 PNAS 98:5922); expression high in roots and kernels (compare czog2).
2.03
GRMZM2G168474
Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: March 20th, 2014
Variation: October 25th, 2012
Gene Model: March 20th, 2014
85 days agonkd2 naked endosperm2: double mutants have multiple (2-5) layers of peripheral endosperm cells that lack starch granules or other features of starchy endosperm
10.06
GRMZM5G884137
Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: January 3rd, 2015
Variation: December 21st, 2017
Gene Model: December 21st, 2017
85 days agomkkk16 MAP kinase kinase kinase16: Function inferred from sequence similarity (Kong 2013)
2.06
GRMZM2G098828
Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: July 10th, 2013
Gene Model: July 11th, 2013
85 days agode18 defective18: Defective kernel: seed weight less than half of normal (B37) (Torti et al. 1984)
10.03
GRMZM2G091819
Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: June 18th, 2018
Variation: January 21st, 2016
Gene Model: September 11th, 2012
85 days agonkd1 naked endosperm1: double mutants have multiple (2-5) layers of peripheral endosperm cells that lack starch granules or other features of starchy endosperm
 
GRMZM2G129261
Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: January 3rd, 2015
Variation: January 3rd, 2015
Gene Model: January 2nd, 2015
85 days agocsld1 cellulose synthase-like D1: participates in cell wall polysaccharides formation during cell division; mutants have narrow leaves
 
GRMZM2G015886
Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: October 7th, 2016
Variation: October 18th, 2018
Gene Model: October 18th, 2018
85 days agothkl1 thick aleurone-like1: likely accounts for the ability of thk1 mutants to form viable cells
 
GRMZM5G827026
Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: August 1st, 2020
Gene Model: August 1st, 2020
85 days agocadtfr12 CCAAT-DR1-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
9.03
GRMZM2G167576
Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: August 9th, 2016
Gene Model: August 8th, 2016
85 days agocdc201 cell division cycle201:
4.06
GRMZM2G063192
Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Variation: March 31st, 2005
Gene Model: November 18th, 2016
87 days agosmr5 siamese-related5:
9.08 - 9.08
GRMZM2G413337
Zhang, ZQ et al. 2020. BMC Evolutionary Biology 20:91     Reference: July 30th, 2020
Gene Product: March 8th, 2017
Variation: September 1st, 2003
Gene Model: June 27th, 2020
87 days agoumc1671  :
7.05
GRMZM2G041328
    Variation: September 1st, 2003
Gene Model: July 30th, 2020
87 days agosmr4 siamese-related4:
 
GRMZM2G019353
Zhang, ZQ et al. 2020. BMC Evolutionary Biology 20:91     Reference: July 30th, 2020
Gene Product: March 8th, 2017
Gene Model: March 14th, 2018
87 days agosmr1 siamese-related1:
 
GRMZM2G013463
Zhang, ZQ et al. 2020. BMC Evolutionary Biology 20:91     Reference: July 30th, 2020
Gene Product: March 8th, 2017
Gene Model: July 30th, 2020
87 days agosmr2 siamese-related2: may have been primarily responsible for the endoreplication regulation of outer endosperm or aleurone cells
 
GRMZM2G144024
Zhang, ZQ et al. 2020. BMC Evolutionary Biology 20:91     Reference: July 30th, 2020
Gene Product: March 8th, 2017
Gene Model: July 30th, 2020
87 days agosmr3 siamese-related3:
 
GRMZM2G331766
Zhang, ZQ et al. 2020. BMC Evolutionary Biology 20:91     Reference: July 30th, 2020
Gene Product: March 8th, 2017
Gene Model: July 30th, 2020
87 days agosmr6 siamese-related6:
 
GRMZM2G090029
Zhang, ZQ et al. 2020. BMC Evolutionary Biology 20:91     Reference: July 30th, 2020
Gene Product: March 8th, 2017
Gene Model: July 30th, 2020
87 days agosmr7 siamese-related7:
 
GRMZM2G004898
Zhang, ZQ et al. 2020. BMC Evolutionary Biology 20:91     Reference: July 30th, 2020
Gene Product: March 8th, 2017
Gene Model: July 30th, 2020
87 days agosmr9 siamese-related9: may have regulated the initiation of endoreplication in endosperm central cells
 
GRMZM2G337190
Zhang, ZQ et al. 2020. BMC Evolutionary Biology 20:91     Reference: July 30th, 2020
Gene Product: March 8th, 2017
Gene Model: July 30th, 2020
87 days agosmr10 siamese-related10: may have been primarily responsible for the endoreplication regulation of outer endosperm or aleurone cells
 
GRMZM2G493549
Zhang, ZQ et al. 2020. BMC Evolutionary Biology 20:91     Reference: July 30th, 2020
Gene Product: March 8th, 2017
Gene Model: July 30th, 2020
87 days agosmr11 siamese-related11: may have regulated the initiation of endoreplication in endosperm central cells
 
GRMZM2G140032
Zhang, ZQ et al. 2020. BMC Evolutionary Biology 20:91     Reference: July 30th, 2020
Gene Product: March 8th, 2017
Gene Model: July 30th, 2020
87 days agosmr12 siamese-related12: may have regulated the initiation of endoreplication in endosperm central cells
 
GRMZM2G388297
Zhang, ZQ et al. 2020. BMC Evolutionary Biology 20:91     Reference: July 30th, 2020
Gene Product: March 8th, 2017
Gene Model: July 30th, 2020
87 days agopco129709  :
7.06
GRMZM2G140758
    Variation: September 25th, 2007
Gene Model: July 30th, 2020
87 days agosmr8 siamese-related8:
6.02
GRMZM5G897944
Zhang, ZQ et al. 2020. BMC Evolutionary Biology 20:91     Reference: July 30th, 2020
Gene Product: March 8th, 2017
Variation: March 31st, 2005
Gene Model: January 17th, 2020
88 days agothx43 Trihelix-transcription factor 43:
10.03
GRMZM2G110145
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 29th, 2020
Variation: September 1st, 2003
Gene Model: December 9th, 2017
88 days agothx21 Trihelix-transcription factor 21: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
88 days agothx1 Trihelix-transcription factor 1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
88 days agothx10 Trihelix-transcription factor 10: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
88 days agothx12 Trihelix-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
88 days agothx13 Trihelix-transcription factor 13: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.NCBI 103626744 is similar to RNA-metabolising metallo-beta-lactamase family protein of A. thaliana
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
88 days agothx14 Trihelix-transcription factor 14: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
88 days agothx15 Trihelix-transcription factor 15: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
88 days agothx16 Trihelix-transcription factor 16: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
88 days agothx17 Trihelix-transcription factor 17: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
88 days agothx18 Trihelix-transcription factor 18: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
88 days agothx19 Trihelix-transcription factor 19: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
88 days agothx2 Trihelix-transcription factor 2: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
88 days agothx20 Trihelix-transcription factor 20: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to protein GT-2-like 1 of A. thaliana
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
88 days agothx22 Trihelix-transcription factor 22: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
88 days agothx23 Trihelix-transcription factor 23: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
88 days agothx24 Trihelix-transcription factor 24: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
88 days agothx25 Trihelix-transcription factor 25: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
88 days agothx26 Trihelix-transcription factor 26: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. This locus shares some 40% sequence similarity to aspartate/glutamate/uridylate kinase-like protein of A. thaliana, and where the function of the A. thaliana protein was assigned based on sequence similarity to another species. (Dec 2019 Updated)
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
88 days agothx27 Trihelix-transcription factor 27: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
88 days agothx28 Trihelix-transcription factor 28: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
88 days agothx29 Trihelix-transcription factor 29: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
88 days agothx3 Trihelix-transcription factor 3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
88 days agothx4 Trihelix-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
88 days agothx5 Trihelix-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 29th, 2020
88 days agothx6 Trihelix-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 29th, 2020
88 days agothx7 Trihelix-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to sequence-specific DNA binding transcription factor of A. thaliana
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 29th, 2020
88 days agothx8 Trihelix-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 29th, 2020
88 days agothx9 Trihelix-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 29th, 2020
88 days agothx11 Trihelix-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models (in this case GRMZM2G103315).
4.09
GRMZM2G091258
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 29th, 2020
Gene Model: August 7th, 2019
88 days agothx30 Trihelix-transcription factor 30:
 
GRMZM2G031493
Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
Gene Model: August 7th, 2019
88 days agothx31 Trihelix-transcription factor 31: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G427087
Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
Gene Model: August 7th, 2019
88 days agothx32 Trihelix-transcription factor 32: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G320827
Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
Gene Model: August 7th, 2019
88 days agothx33 Trihelix-transcription factor 33: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G149590
Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
Gene Model: August 7th, 2019
88 days agothx34 Trihelix-transcription factor 34: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G162840
Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
Gene Model: August 7th, 2019
88 days agothx35 Trihelix-transcription factor 35: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G081445
Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
Gene Model: August 7th, 2019
88 days agothx36 Trihelix-transcription factor 36: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G476752
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 29th, 2020
Gene Model: August 7th, 2019
88 days agothx37 Trihelix-transcription factor 37: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G334722
Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
Gene Model: August 7th, 2019
88 days agothx38 Trihelix-transcription factor 38: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G126148
Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
Gene Model: August 7th, 2019
88 days agothx39 Trihelix-transcription factor 39: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G301122
Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
Gene Model: August 7th, 2019
88 days agothx40 Trihelix-transcription factor 40: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G469873
Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
Gene Model: August 7th, 2019
88 days agothx41 Trihelix-transcription factor 41: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM5G818655
Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
Gene Model: August 7th, 2019
88 days agothx42 Trihelix-transcription factor 42: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G037823
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 29th, 2020
Gene Model: August 7th, 2019
88 days agothx44 Trihelix-transcription factor 44: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G122277
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 29th, 2020
Gene Model: August 7th, 2019
88 days agothx45 Trihelix-transcription factor 45:
 
GRMZM2G084684
Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
Gene Model: July 29th, 2020
88 days agothx46 Trihelix-transcription factor 46:
 
GRMZM2G153575
Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
Gene Model: July 29th, 2020
88 days agothx47 Trihelix-transcription factor 47:
 
GRMZM2G305362
Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
Gene Model: July 29th, 2020
88 days agothx48 Trihelix-transcription factor 48:
 
GRMZM2G375307
Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
Gene Model: July 29th, 2020
88 days agopco077498  :
7.04
GRMZM2G577405
    Variation: September 25th, 2007
Gene Model: July 29th, 2020
89 days agod1 dwarf plant1: andromonoecious, short, compact plants; responds to gibberellins; d1-t intermediate in height
3.03
GRMZM2G036340
Lin, JW et al. 2020. Euphytica 216:132     Reference: July 28th, 2020
Gene Product: October 25th, 2014
Variation: October 30th, 2014
Gene Model: October 2nd, 2012
89 days agoumc1543  :
7.04
GRMZM5G898305
    Variation: September 1st, 2003
Gene Model: July 28th, 2020
89 days agobhlh88 bHLH-transcription factor 88: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Lin, JW et al. 2020. Euphytica 216:132     Reference: July 28th, 2020
Gene Product: September 14th, 2016
89 days agocaf2 crs2 associated factor2: CRS2-associated factor 2; CRM domain chloroplast RNA binding protein. Interacts with CRS2, promotes splicing of several chloroplast group II introns and binds to those introns in vivo. (A. Barkan, 2015)ivory colored leaf, seedling lethal; RNA splicing
3.04
AC199526.5_FG003
Lin, JW et al. 2020. Euphytica 216:132   AT1G23400 (TAIR)
LOC_Os01g21990 (MSU/TIGR)
Os01g0323300 (Gramene)
Reference: July 28th, 2020
Gene Product: July 23rd, 2009
Variation: July 22nd, 2009
Gene Model: July 14th, 2011
90 days agodek10 defective kernel10: collapsed endosperm; lethal; cultured embryos green, curled, stubby; encodes a E-subgroup PPR protein
4.06 - 4.11
GRMZM2G087226
Dai, DW et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa348     Reference: July 27th, 2020
Gene Product: December 27th, 2016
Variation: February 20th, 2017
Gene Model: February 20th, 2017
90 days agodek19 defective kernel19: collapsed opaque endosperm; lethal; cultured embryos green
6.01 - 6.08
GRMZM2G111984
Dai, DW et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa348     Reference: July 27th, 2020
Gene Product: December 27th, 2016
Variation: November 13th, 2018
Gene Model: November 13th, 2018
90 days agonactf108 NAC-transcription factor 108: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.functions as a negative regulator of the stay‐green trait
 
   Shan, T et al. 2020. Russ J Genet 56:835-842     Reference: July 27th, 2020
Gene Product: July 8th, 2019
Variation: May 4th, 2019
90 days agoaox1 alternative oxidase1 : primers give PCR product closely similar to alternative oxidase in other species
2.02
AC233960.1_FG002
Dai, DW et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa348     Reference: July 27th, 2020
Gene Product: February 22nd, 2012
Variation: February 22nd, 2012
Gene Model: February 17th, 2012
90 days agocyc14 cyclin14: NCBI: cyclin-D4-2-like
1.07
GRMZM2G133413
Diaz-Granados, VH et al. 2020. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2020.07.041     Reference: July 27th, 2020
Gene Product: June 26th, 2009
Variation: January 19th, 2017
Gene Model: January 19th, 2017
90 days agocdc2 cell division control protein homolog2: cDNA sequence homologous to cdc2/cdc28 subfamily of serine/threonine protein kinases, complements yeast cdc28
1.01
GRMZM2G008327
Diaz-Granados, VH et al. 2020. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2020.07.041     Reference: July 27th, 2020
Gene Product: December 29th, 2016
Variation: April 23rd, 2010
Gene Model: March 30th, 2015
90 days agodct1 dicarboxylic acid transporter1: plastid transporter, specific to mesophyll cells (Taniguchi et al 2004)
 
GRMZM2G040933
Zamani-Nour, S et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa343     Reference: July 27th, 2020
Gene Product: August 18th, 2014
Gene Model: August 18th, 2014
90 days agocyc11 cyclin11: Associates to cyclin dependent kinase proteins during germination and the complexes formed develop kinase activity.
 
GRMZM2G161382
Diaz-Granados, VH et al. 2020. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2020.07.041     Reference: July 27th, 2020
Gene Product: June 26th, 2009
Gene Model: December 21st, 2016
90 days agocki3 cyclin-dependent kinase inhibitor3:
 
GRMZM2G157510
Diaz-Granados, VH et al. 2020. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2020.07.041     Reference: July 27th, 2020
Gene Product: March 8th, 2017
Variation: May 4th, 2017
Gene Model: March 7th, 2017
90 days agocki8 cyclin-dependent kinase inhibitor8:
 
GRMZM2G154414
Diaz-Granados, VH et al. 2020. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2020.07.041     Reference: July 27th, 2020
Gene Product: March 8th, 2017
Gene Model: March 7th, 2017
90 days agoppr170 pentatricopeptide repeat protein170: mutants have a defective/collapsed kernel phenotype
 
GRMZM2G480380
Dai, DW et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa348     Reference: July 27th, 2020
Gene Product: December 27th, 2016
Variation: July 27th, 2020
Gene Model: July 27th, 2020
90 days agoorrm4 organelle RRM protein4:
 
GRMZM2G131167
Dai, DW et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa348     Reference: July 27th, 2020
Gene Product: April 11th, 2013
Gene Model: July 27th, 2020
90 days agoorrm1 organelle RRM protein1: ORRM-domain protein, involved in chloroplast RNA editing. (A. Barkan, 2015)encodes an essential plastid editing factor
5.06
GRMZM5G899787
Dai, DW et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa348     Reference: July 27th, 2020
Gene Product: April 11th, 2013
Variation: April 12th, 2013
Gene Model: April 11th, 2013
90 days agooxmt1 oxo-glutarate/malate transporter1: single copy, plastid tranporter specific to mesophyll cells (Taniguchi et al 2004)
 
GRMZM2G383088
Zamani-Nour, S et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa343     Reference: July 27th, 2020
Gene Product: August 18th, 2014
Gene Model: August 18th, 2014
90 days agomorf8 multiple organelle RNA editing factor8:
9.07
GRMZM2G169384
Dai, DW et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa348     Reference: July 27th, 2020
Variation: March 31st, 2005
Gene Model: January 24th, 2019
91 days agobrd103  :
7.03
GRMZM2G040079
    Variation: September 1st, 2003
Gene Model: July 26th, 2020
3 months agoumc1456  :
7.03
GRMZM2G004990
    Variation: September 1st, 2003
Gene Model: July 25th, 2020
3 months agopco123006  :
7.02
GRMZM5G843748
    Variation: September 25th, 2007
Gene Model: July 25th, 2020
3 months agocptk1 chloroplast thymidine kinase1: Mutants have aberrant chloroplast DNA metabolism. Alice Barkan, 2011
 
GRMZM2G048821
Najera-Martinez, M et al. 2020. Plants 9:930     Reference: July 23rd, 2020
Variation: October 11th, 2018
Gene Model: September 6th, 2011
3 months agocko2 cytokinin oxidase 2:
3.05
GRMZM2G050997
Yao, QL; Di, S-Z. 2020. Intl J Agric Biol 23:475-483     Reference: July 22nd, 2020
Gene Product: April 4th, 2014
Variation: February 26th, 2008
Gene Model: March 21st, 2014
Recommended by Ed Coe:
January 8th, 2008
3 months agouaz7c01c10  :
 
GRMZM2G003038
    Variation: September 1st, 2003
Gene Model: July 22nd, 2020
3 months agohsftf19 HSF-transcription factor 19: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yao, QL; Di, S-Z. 2020. Intl J Agric Biol 23:475-483     Reference: July 22nd, 2020
Gene Product: May 15th, 2020
3 months agodek46 defective kernel46: mutant kernels are small with shrunken pericarps after maturation
 
GRMZM2G456114
Xu, CH et al. 2020. Plant J pp.doi: 10.1111/tpj.14862     Reference: July 22nd, 2020
Gene Product: December 27th, 2016
Variation: June 22nd, 2020
Gene Model: June 20th, 2020
3 months agocsu996  :
7.04
GRMZM2G047592
Baysdorfer, C. 1996. Nucleotide sequence submission to dbEST     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: July 21st, 2020
3 months agoys1 yellow stripe1: yellow tissue between leaf veins, reflects iron deficiency symptoms; defect in Fe-phytosiderophore uptake
5.05 - 5.06
   Zang, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa332     Reference: July 21st, 2020
Gene Product: September 1st, 2003
Variation: March 9th, 2018
3 months agozpl2a zein polypeptidesL2a: zein protein characterized by electrophoretic mobility on isoelectric focusing gels. Maps near orp1
4.08
GRMZM2G404459
Zang, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa332     Reference: July 21st, 2020
Gene Product: September 1st, 2003
Variation: January 14th, 2015
Gene Model: January 14th, 2015
3 months agoumc1549a  :
7.02
GRMZM2G375667
    Variation: September 1st, 2003
Gene Model: July 21st, 2020
3 months agowrky79 WRKY-transcription factor 79: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.regulates phytoalexin biosynthetic gene expression
 
GRMZM2G061408
Fu, JY et al. 2017. J Exp Bot pp.doi; 10.1093/jxb/erx436     Reference: December 22nd, 2017
Gene Product: July 24th, 2017
Gene Model: July 21st, 2020
3 months agoaz19D2 alpha zein 19kDa D2: member of a two-gene family, z1D, closely linked
1.05
AF546187.1_FG007
Zang, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa332     Reference: July 21st, 2020
Gene Product: September 1st, 2003
Gene Model: November 21st, 2014
3 months agoifa1 indeterminate floral apex1: mutants have perturbed floral and inflorescence meristems as well as droopy leaves with increased angle
 
GRMZM2G088309
Li, T et al. 2020. Front Genet doi: 10.3389/fgene.2020.00747   AT1G69180 (TAIR)
LOC_Os03g11600 (MSU/TIGR)
Reference: July 21st, 2020
Gene Product: October 16th, 2015
Variation: July 13th, 2017
Gene Model: October 16th, 2015
3 months agozp3 zein protein3: encodes a 22 kD alpha zein
 
GRMZM2G160739
Zang, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa332     Reference: July 21st, 2020
Gene Product: September 1st, 2003
Gene Model: August 1st, 2016
3 months agoz1A-3 alpha zein 19kDa A-3:
 
GRMZM2G059620
Zang, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa332     Reference: July 21st, 2020
Gene Product: September 1st, 2003
Gene Model: July 3rd, 2019
3 months agoysl1 yellow stripe-like transporter1:
 
GRMZM2G051179
Zang, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa332     Reference: July 21st, 2020
Gene Product: September 1st, 2003
Gene Model: July 8th, 2020
3 months agoysl3 yellow stripe-like transporter3:
 
GRMZM2G026391
Zang, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa332     Reference: July 21st, 2020
Gene Product: September 1st, 2003
Gene Model: July 8th, 2020
3 months agoysl2 yellow stripe-like transporter2: mutants have small/collapsed kernels
 
GRMZM2G135291
Zang, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa332     Reference: July 21st, 2020
Gene Product: September 1st, 2003
Variation: July 21st, 2020
Gene Model: July 9th, 2020
3 months agoccp2 cysteine protease2: mRNA differentially enhanced in late- vs. early-senescing lines; similarity to rice oryzain gamma (cysteine protease) and castor bean vacuolar processing enzyme
7.02
   Liu, N et al. 2020. Mol Breed 40:71     Reference: July 20th, 2020
Gene Product: May 23rd, 2019
Variation: July 30th, 2011
3 months agovp8 viviparous8: embryo fails to become dormant; chlorophyll and carotenoids unaffected; small, pointed-leaf seedlings
1.11
   Luck, K et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01037-4     Reference: July 20th, 2020
Gene Product: November 29th, 2012
Variation: June 4th, 2018
3 months agotps8 terpene synthase8:
1.04 - 1.04
GRMZM2G038153
Luck, K et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01037-4     Reference: July 20th, 2020
Variation: May 29th, 2012
Gene Model: May 28th, 2012
3 months agotps7 terpene synthase7:
 
AC217050.4_FG007
Luck, K et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01037-4     Reference: July 20th, 2020
Gene Product: July 17th, 2016
Variation: May 28th, 2012
Gene Model: June 8th, 2012
3 months agorpl17b ribosomal protein L17b:
 
GRMZM2G702426
Dressano, K et al. 2020. Nature Plants pp.doi: 10.1038/s41477-020-0724-1     Reference: July 20th, 2020
Variation: June 7th, 2013
Gene Model: August 7th, 2014
3 months agobr2 brachytic2: like br1; mi1 is allelic and preceded (1935), but br2 name is retained due to long usagelike Arabidopsis ABC transporter B family member 1
1.06 - 1.07
GRMZM2G315375
Li, X et al. 2020. Int J Mol Sci 21:5052     Reference: July 18th, 2020
Gene Product: May 1st, 2012
Variation: December 30th, 2019
Gene Model: April 28th, 2012
3 months agoaps1 ATP sulfurylase1:
1.10
GRMZM2G149952
Li, X et al. 2020. Int J Mol Sci 21:5052     Reference: July 18th, 2020
Gene Product: September 1st, 2003
Variation: September 26th, 2017
Gene Model: September 26th, 2017
3 months agoabi12 ABI3-VP1-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Li, X et al. 2020. Int J Mol Sci 21:5052     Reference: July 18th, 2020
Variation: September 20th, 2019
3 months agoacs7 1-aminocyclopropane-1-carboxylate synthase7: mutations in the 3' end of the 4th Exon result in a semi-drawf phenotype; knockout mutants can give significantly taller plants
10.05
GRMZM5G894619
Li, X et al. 2020. Int J Mol Sci 21:5052     Reference: July 18th, 2020
Gene Product: May 16th, 2016
Variation: April 23rd, 2020
Gene Model: January 21st, 2016
3 months agodwil1 dwarf & irregular leaf1: mutant plants have shorter internodes, shorter, wider and wrinkled leaves, as well as smaller leaf angle
 
GRMZM2G013657
Li, X et al. 2020. Int J Mol Sci 21:5052     Reference: July 18th, 2020
Gene Product: July 5th, 2019
Variation: March 18th, 2013
Gene Model: March 12th, 2013
3 months agobri1a brassinosteroid insensitive1a: Encodes a brassinosteroid receptor
 
GRMZM2G048294
Li, X et al. 2020. Int J Mol Sci 21:5052   AT4G39400 (TAIR)
LOC_Os01g52050 (MSU/TIGR)
Reference: July 18th, 2020
Variation: July 17th, 2015
Gene Model: July 16th, 2015
3 months agobri1b brassinosteroid insensitive1b: Encodes a brassinosteroid receptor
 
GRMZM2G449830
Li, X et al. 2020. Int J Mol Sci 21:5052     Reference: July 18th, 2020
Variation: July 17th, 2015
Gene Model: July 16th, 2015
3 months agoili1 increased leaf inclination1: knockout mutants confer decreased leaf angle
 
GRMZM2G072820
Li, X et al. 2020. Int J Mol Sci 21:5052   LOC_Os04g54900 (MSU/TIGR)
Os04g0641700 (Gramene)
Reference: July 18th, 2020
Gene Product: September 14th, 2016
Variation: September 19th, 2019
Gene Model: September 19th, 2019
3 months agoibh1 increased leaf inclination1-binding bhlh 1:
 
GRMZM2G388823
Li, X et al. 2020. Int J Mol Sci 21:5052   AT2G43060 (TAIR) Reference: July 18th, 2020
Gene Product: September 14th, 2016
Variation: January 28th, 2020
Gene Model: January 28th, 2020
3 months agobbc1 breast basic conserved homolog1: a CK responsive gene tightly correlated with cell division, implying that CK may modulate leaf angle through the control of cell profile
 
GRMZM2G145280
Li, X et al. 2020. Int J Mol Sci 21:5052   AT3G49010 (TAIR) Reference: July 18th, 2020
Gene Product: January 13th, 2020
Gene Model: July 18th, 2020
3 months agozep1 zeaxanthin epoxidase1:
2.04
GRMZM2G127139
Chen, M-X et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13849     Reference: July 17th, 2020
Gene Product: December 10th, 2011
Variation: August 29th, 2011
Gene Model: April 8th, 2013
3 months agoesp5 embryo specific protein5: (was Emb5); cDNA clone, embryo specific, ABA responsive, deduced amino acid sequence very hydrophilic and gly/glu-rich (aka emb5)
6.05
GRMZM2G162659
Chen, M-X et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13849     Reference: July 17th, 2020
Variation: September 1st, 2003
Gene Model: July 27th, 2016
3 months agoereb160 AP2-EREBP-transcription factor 160: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
9.01
GRMZM2G171179
Hao, LD et al. 2020. PeerJ 8:.e9551     Reference: July 17th, 2020
Variation: September 1st, 2003
Gene Model: September 25th, 2015
3 months agoereb148 AP2-EREBP-transcription factor 148: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Hao, LD et al. 2020. PeerJ 8:.e9551     Reference: July 17th, 2020
Variation: May 4th, 2016
3 months agoereb94 AP2-EREBP-transcription factor 94: strongly expressed in the maize endosperm; might act as a key regulator of starch synthesis in maize (Li et al., 2017)
 
   Hao, LD et al. 2020. PeerJ 8:.e9551     Reference: July 17th, 2020
Variation: May 9th, 2017
3 months agoereb22 AP2-EREBP-transcription factor 22: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.03
GRMZM2G006745
Han, QH et al. 2020. Plant J pp.doi: 10.1111/tpj.14922     Reference: July 14th, 2020
Variation: July 17th, 2020
Gene Model: September 18th, 2018
3 months agopebp7 phosphatidylethanolamine-binding protein7:
 
   Castelletti, S et al. 2020. PLoS Genetics pp.doi: 10.1371/journal.pgen.1008882     Reference: July 16th, 2020
Variation: June 19th, 2015
3 months agopebp8 phosphatidylethanolamine-binding protein8: florigen activity: complements Arabidopsis FT mutants, promoting flowering at short days. Requires functional id1 gene.(Lazakis et al 2011)
 
GRMZM2G179264
Castelletti, S et al. 2020. PLoS Genetics pp.doi: 10.1371/journal.pgen.1008882     Reference: July 16th, 2020
Gene Product: May 6th, 2011
Variation: June 19th, 2015
Gene Model: May 6th, 2011
3 months agopebp12 phosphatidylethanolamine-binding protein12:
 
   Castelletti, S et al. 2020. PLoS Genetics pp.doi: 10.1371/journal.pgen.1008882     Reference: July 16th, 2020
Variation: December 10th, 2010
3 months agoumc1409  :
7.02
GRMZM2G396540
    Variation: September 1st, 2003
Gene Model: July 16th, 2020
3 months agomads69 MADS-transcription factor 69: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.contributes to natural variation in flowering time in maize
 
   Castelletti, S et al. 2020. PLoS Genetics pp.doi: 10.1371/journal.pgen.1008882     Reference: July 16th, 2020
Variation: October 5th, 2018
3 months agordm4 RNA-directed DNA methylation4: mutants have an opaque endosperm
 
GRMZM2G098603
Jia, SG et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa325     Reference: July 16th, 2020
Gene Product: July 16th, 2020
Variation: July 16th, 2020
Gene Model: July 16th, 2020
3 months agoconz1 constans1: homologous to photoperiod genes constans (co) from Arabidopsis and heading date 1 (hd1) in rice. (Miller 2008)
9.03
   Castelletti, S et al. 2020. PLoS Genetics pp.doi: 10.1371/journal.pgen.1008882     Reference: July 16th, 2020
Gene Product: June 18th, 2018
Variation: July 28th, 2008
3 months agogpc1 glyceraldehyde-3-phosphate dehydrogenase1: cytosolic, C subunit, type 3 gene; coding region has sequence homology to gpc2, unique 3' untranslated region, constitutive expression; SSRs phi026, 079
4.05
   Han, QH et al. 2020. Plant J pp.doi: 10.1111/tpj.14922     Reference: July 14th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
3 months agorafs1 raffinose synthase1: mutants have significantly reduced seed vigor
3.03
GRMZM2G150906
Han, QH et al. 2020. Plant J pp.doi: 10.1111/tpj.14922     Reference: July 14th, 2020
Gene Product: October 25th, 2019
Variation: March 23rd, 2018
Gene Model: March 23rd, 2018
3 months agoaas2 auxin amido synthetase2: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G378106
Han, QH et al. 2020. Plant J pp.doi: 10.1111/tpj.14922     Reference: July 14th, 2020
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
3 months agogols1 galactinol synthase1: Similar to water stress-induced protein of rice (per Baysdorfer, C.)
1.03
GRMZM2G165919
Han, QH et al. 2020. Plant J pp.doi: 10.1111/tpj.14922     Reference: July 14th, 2020
Gene Product: March 1st, 2018
Variation: January 26th, 2010
Gene Model: December 24th, 2015
3 months agogols3 galactinol synthase3: Expressed late in seed developmentExpressed during post-imbibition dehydration stress
9.04
GRMZM5G872256
Han, QH et al. 2020. Plant J pp.doi: 10.1111/tpj.14922     Reference: July 14th, 2020
Gene Product: March 1st, 2018
Variation: January 26th, 2010
Gene Model: December 24th, 2015
3 months agolox10 lipoxygenase10: green leaf volatiles, circadian, herbivore defense; sequence predicts plastidic location; images show location in non-chlorophyll containing organelles
4.09
GRMZM2G015419
Wang, K-D et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1792187     Reference: July 13th, 2020
Gene Product: January 3rd, 2018
Variation: February 28th, 2020
Gene Model: October 29th, 2015
3 months agoopr8 12-oxo-phytodienoic acid reductase8: peroxisomal; synthesis of jasmonic acid
4.05
GRMZM2G082087
Wang, K-D et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1792187     Reference: July 13th, 2020
Gene Product: September 3rd, 2010
Variation: December 16th, 2019
Gene Model: November 25th, 2013
3 months agosus6 sucrose synthase6:
 
GRMZM2G045171
Chen, HM et al. 2020. J Southern Agric 51:1098-1107     Reference: July 13th, 2020
Gene Product: October 25th, 2006
Gene Model: July 13th, 2020
3 months agosus7 sucrose synthase7:
 
GRMZM2G060659
Chen, HM et al. 2020. J Southern Agric 51:1098-1107     Reference: July 13th, 2020
Gene Product: October 25th, 2006
Gene Model: July 13th, 2020
3 months agopco086679  :
7.01
GRMZM2G132568
    Variation: September 25th, 2007
Gene Model: July 13th, 2020
3 months agoIDP293  :
6.01
GRMZM2G075408
    Variation: March 31st, 2005
Gene Model: July 11th, 2020
3 months agoesr6 embryo surrounding region6: transcript specific to embryo surrounding region near basal endosperm transfer layer
4.09
GRMZM2G048353
Odintsova, TI et al. 2020. Biomolecules 10:1029     Reference: July 10th, 2020
Gene Product: July 25th, 2018
Variation: January 5th, 2016
Gene Model: January 5th, 2016
3 months agoes4 embryo sac4: one of 4-5 copy gene family; pre-zygotic, embryo sac specific; required for pollen tube growth arrest and burst
 
GRMZM2G009359
Odintsova, TI et al. 2020. Biomolecules 10:1029     Reference: July 10th, 2020
Gene Product: April 22nd, 2011
Variation: April 25th, 2011
Gene Model: April 22nd, 2011
3 months agoes1 embryo sac1: one of 4-5 copy gene family; pre-zygotic embryo sac specific; required for pollen tube growth arrest and burst
 
GRMZM2G012012
Odintsova, TI et al. 2020. Biomolecules 10:1029     Reference: July 10th, 2020
Gene Product: April 22nd, 2011
Variation: April 25th, 2011
Gene Model: April 22nd, 2011
3 months agoes2 embryo sac2: one of 4-5 copy gene family; pre-zygotic embryo sac specific; required for pollen tube growth arrest and burst
 
GRMZM2G009359
Odintsova, TI et al. 2020. Biomolecules 10:1029     Reference: July 10th, 2020
Gene Product: April 22nd, 2011
Gene Model: April 22nd, 2011
3 months agoes3 embryo sac3: one of 4-5 copy gene family; pre-zygotic embyro sac specific; required for pollen tube growth arrest and burst
 
GRMZM2G009359
Odintsova, TI et al. 2020. Biomolecules 10:1029     Reference: July 10th, 2020
Gene Product: April 22nd, 2011
Gene Model: April 22nd, 2011
3 months agoga20ox3 gibberellin 20-oxidase3: mutants have a semidwarf phenotype
 
GRMZM2G368411
Zhang, JJ et al. 2020. Frontiers Plant Sci 11:1048     Reference: July 10th, 2020
Gene Product: October 28th, 2014
Variation: July 10th, 2020
Gene Model: October 29th, 2014
3 months agodef2 defensin-like protein2:
 
GRMZM2G368861
Odintsova, TI et al. 2020. Biomolecules 10:1029     Reference: July 10th, 2020
Gene Product: July 25th, 2018
Gene Model: June 10th, 2016
3 months agodef4 defensin-like protein4:
 
GRMZM2G153488
Odintsova, TI et al. 2020. Biomolecules 10:1029     Reference: July 10th, 2020
Gene Product: July 25th, 2018
Gene Model: September 16th, 2017
3 months agodef1 defensin-like protein1:
10.03
GRMZM2G368890
Odintsova, TI et al. 2020. Biomolecules 10:1029     Reference: July 10th, 2020
Gene Product: July 25th, 2018
Gene Model: June 10th, 2016
3 months agoIDP455  :
6.01
GRMZM2G172664
    Variation: March 31st, 2005
Gene Model: July 10th, 2020
3 months agomir1 maize insect resistance1: single copy cDNA
6.02
   Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: May 23rd, 2019
Variation: November 21st, 2017
3 months agocsu1187  :
6.01
GRMZM2G102737
Baysdorfer, C. 1996. Nucleotide sequence submission to dbEST     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: July 9th, 2020
3 months agocdpk13 calcium dependent protein kinase13: E. coli expressed fusion protein does not appear to require calcium
 
GRMZM2G173928
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: December 3rd, 2013
Variation: November 15th, 2013
Gene Model: March 31st, 2015
3 months agobm2 brown midrib2: brown pigmentation in the leaf midrib and tissues accumulate reduced levels of lignin; like bm1cDNA complements yeast met12 met13 mutant; one of two or more loci, second locus may be on chromosome 5 near gln4
1.11
GRMZM2G347056
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: August 28th, 2012
Variation: November 30th, 2013
Gene Model: November 30th, 2013
3 months agocat1 catalase1: electrophoretic mobility; cytosolic/glyoxysomal; tetrameric; intra/interlocus hybrid bands occur
5.03
   Du, HM et al. 2020. Frontiers Plant Sci 11:1016     Reference: July 9th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
3 months agotps4 terpene synthase4: gene product raised in E. coli forms same mixture of sesquiterpene olefins as tsp5 but with quantitative differences.
10.03
GRMZM2G117319
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: September 4th, 2008
Variation: September 4th, 2008
Gene Model: May 28th, 2012
3 months agotps5 terpene synthase5:
10.03
GRMZM2G074309
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: September 4th, 2008
Variation: September 4th, 2008
Gene Model: May 26th, 2012
3 months agotps10 terpene synthase10:
10.03
GRMZM2G179092
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: September 4th, 2008
Variation: September 4th, 2008
Gene Model: May 28th, 2012
3 months agomir2 maize insect resistance2: cDNA; SSR umc1178
6.02
GRMZM2G150256
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: September 1st, 2003
Variation: September 2nd, 2014
Gene Model: September 2nd, 2014
3 months agopme1 pectin methylesterase1: pollen; cDNA and genomic sequences
10.04
GRMZM2G125356
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: September 10th, 2018
Variation: October 8th, 2015
Gene Model: October 8th, 2015
3 months agofps3 farnesyl diphosphate synthase3: terpene based defense (Richter et al 2015)
3.07
GRMZM2G098569
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: August 18th, 2015
Gene Model: August 18th, 2015
3 months agopme31 pectin methylesterase31:
3.09
GRMZM2G004927
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
3 months agotps2 terpene synthase2:
 
GRMZM2G046615
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: May 28th, 2012
Variation: May 28th, 2012
Gene Model: May 28th, 2012
3 months agotps3 terpene synthase3:
 
GRMZM2G064406
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: May 28th, 2012
Variation: May 28th, 2012
Gene Model: May 28th, 2012
3 months agotps9 terpene synthase9:
 
GRMZM2G465812
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: September 4th, 2008
Variation: May 28th, 2012
Gene Model: May 28th, 2012
3 months agoscp1 serine carboxypeptidase1: may play a role in the disease resistance response
 
GRMZM2G075676
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: August 5th, 2013
Gene Model: August 5th, 2013
3 months agoaos2 allene oxide synthesis2:
 
GRMZM2G072653
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: September 1st, 2003
Gene Model: October 29th, 2015
3 months agoaos3 allene oxide synthesis3:
 
GRMZM2G376661
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: September 1st, 2003
Gene Model: October 29th, 2015
3 months agoysl8 yellow stripe-like transporter8:
 
GRMZM2G018148
Yordem, BK et al. 2011. Ann Bot 108:821-833     Reference: July 8th, 2020
Gene Product: September 1st, 2003
Gene Model: July 9th, 2020
3 months agoalm3 aluminum tolerance3: Overexpression conferred improved Al tolerance
 
GRMZM5G886177
Du, HM et al. 2020. Frontiers Plant Sci 11:1016     Reference: July 9th, 2020
Gene Product: September 28th, 2005
Gene Model: July 9th, 2020
3 months agosod11 superoxide dismutase11:
 
GRMZM2G042080
Du, HM et al. 2020. Frontiers Plant Sci 11:1016     Reference: July 9th, 2020
Gene Product: September 1st, 2003
Gene Model: July 9th, 2020
3 months agopx16 peroxidase16:
 
GRMZM2G025441
Du, HM et al. 2020. Frontiers Plant Sci 11:1016     Reference: July 9th, 2020
Gene Product: September 18th, 2015
Gene Model: July 9th, 2020
3 months agoccp4 cysteine protease4: apoplastic; pest defense response
7.03
GRMZM2G108849
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: May 23rd, 2019
Gene Model: February 13th, 2014
3 months agommt1 methionine S-methyltransferase1:
8.05
GRMZM2G098031
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: October 25th, 2019
Variation: September 20th, 2018
Gene Model: September 20th, 2018
3 months agopx5 peroxidase 5: cathodal, presence-absence; expressed in all tissues except pollen; insect resistance
6.05
GRMZM2G450233
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: September 18th, 2015
Gene Model: December 30th, 2015
3 months agompk15 MAP kinase15:
6.01
GRMZM2G306028
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: July 12th, 2013
Gene Model: December 13th, 2019
3 months agopsei4 cystatin4:
8.01
GRMZM2G013461
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: April 21st, 2008
Variation: April 21st, 2008
Gene Model: July 28th, 2016
3 months agopsei10 cystatin10:
8.06
GRMZM2G030717
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: April 21st, 2008
Variation: April 21st, 2008
Gene Model: June 1st, 2017
3 months agooy1 oil yellow1: seedling oily greenish-yellow; viable; fails to convert protoporphyrin IX to Mg-protoporphyrin; oy1-t tinged green; oy1-1039, oy1-1040 lethal; Oy1-700 dominant yellow-green; gene product confirmed by transgenic expression and genetic mapping.
10.02
   Khangura, RS et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00306     Reference: July 8th, 2020
Gene Product: June 8th, 2007
Variation: March 17th, 2011
3 months agoysl15 yellow stripe-like transporter15:
4.06
GRMZM2G368398
Yordem, BK et al. 2011. Ann Bot 108:821-833     Reference: July 8th, 2020
Gene Product: September 1st, 2003
Gene Model: April 18th, 2020
3 months agoamya2 alpha amylase2: a male gametophyte inactivation gene (Qi et al., 2020)
 
GRMZM2G070172
Qi, XT et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.06.003     Reference: July 8th, 2020
Gene Product: September 1st, 2003
Gene Model: July 8th, 2020
3 months agoysl6 yellow stripe-like transporter6:
 
GRMZM2G085833
Yordem, BK et al. 2011. Ann Bot 108:821-833     Reference: July 8th, 2020
Gene Product: September 1st, 2003
Gene Model: July 8th, 2020
3 months agoysl11 yellow stripe-like transporter11:
 
GRMZM5G812538
Yordem, BK et al. 2011. Ann Bot 108:821-833     Reference: July 8th, 2020
Gene Product: September 1st, 2003
Gene Model: July 8th, 2020
3 months agoysl9 yellow stripe-like transporter9:
 
GRMZM5G814926
Yordem, BK et al. 2011. Ann Bot 108:821-833     Reference: July 8th, 2020
Gene Product: September 1st, 2003
Gene Model: July 8th, 2020
3 months agoysl12 yellow stripe-like transporter12:
 
GRMZM5G893444
Yordem, BK et al. 2011. Ann Bot 108:821-833     Reference: July 8th, 2020
Gene Product: September 1st, 2003
Gene Model: July 8th, 2020
3 months agoysl17 yellow stripe-like transporter17:
 
GRMZM2G049238
Yordem, BK et al. 2011. Ann Bot 108:821-833     Reference: July 8th, 2020
Gene Product: September 1st, 2003
Gene Model: July 8th, 2020
3 months agoysl10 yellow stripe-like transporter10:
 
GRMZM2G062844
Yordem, BK et al. 2011. Ann Bot 108:821-833     Reference: July 8th, 2020
Gene Product: September 1st, 2003
Gene Model: July 8th, 2020
3 months agoysl13 yellow stripe-like transporter13:
 
GRMZM2G024196
Yordem, BK et al. 2011. Ann Bot 108:821-833     Reference: July 8th, 2020
Gene Product: September 1st, 2003
Gene Model: July 8th, 2020
3 months agoysl14 yellow stripe-like transporter14:
 
GRMZM2G120922
Yordem, BK et al. 2011. Ann Bot 108:821-833     Reference: July 8th, 2020
Gene Product: September 1st, 2003
Gene Model: July 8th, 2020
3 months agoysl18 yellow stripe-like transporter18:
 
GRMZM2G004440
Yordem, BK et al. 2011. Ann Bot 108:821-833     Reference: July 8th, 2020
Gene Product: September 1st, 2003
Gene Model: July 8th, 2020
3 months agophyB1 phytochromeB1: phyB1 mutants have elongated mesocotyl under red light. Double mutant with phyB2 is pale, narrow with elongated leaf blades, elongated internodes, less anthocyanin in sheath tissues, and earlier flowering time.
1.03
   Qiao, P et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1790824     Reference: July 7th, 2020
Gene Product: October 24th, 2007
Variation: May 19th, 2020
3 months agophyB2 phytochromeB2: phyB2 mutant is early flowering. Double mutant with phyB1 is pale, narrow with elongated leaf blades and elongated internodes, and contains less anthocyanin in sheath tissues.
9.05
   Qiao, P et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1790824     Reference: July 7th, 2020
Gene Product: October 24th, 2007
Variation: May 20th, 2020
3 months agopco101731  :
10.04
GRMZM2G414915
    Variation: September 25th, 2007
Gene Model: July 7th, 2020
3 months agomn1 miniature seed1: small, somewhat defective kernel, fully viable; invertase reduced
2.04
   Huang, XJ et al. 2020. Int J Biol Macromol pp.doi: 10.1016/j.ijbiomac.2020.06.254     Reference: July 6th, 2020
Gene Product: June 12th, 2018
Variation: April 13th, 2015
3 months agorgd1 ragged seedling1: (aka lbl1) seedling leaves narrow, thread-like, have difficulty in emerging; low temperature enhances expression
6.01 - 6.01
   Lopez-Ruiz, BA et al. 2020. Plants 9:849     Reference: July 6th, 2020
Gene Product: December 18th, 2014
Variation: June 8th, 2015
3 months agoincw3 invertase cell wall3: genomic sequence (GenBank); SSR umc1053
10.04
   Huang, XJ et al. 2020. Int J Biol Macromol pp.doi: 10.1016/j.ijbiomac.2020.06.254     Reference: July 6th, 2020
Gene Product: June 12th, 2018
Variation: October 7th, 2015
3 months agorel2 ramosa1 enhancer locus2: rel2 mutants dramatically increase the formation of long branches in ears of both ra1 and ra2 mutants
10.03
   Parvathaneni, RK et al. 2020. Genome Biol 21:165     Reference: July 6th, 2020
Gene Product: October 23rd, 2018
Variation: September 5th, 2019
3 months agoumc1369  :
 
GRMZM2G049269
Parvathaneni, RK et al. 2020. Genome Biol 21:165     Reference: July 6th, 2020
Variation: September 1st, 2003
Gene Model: September 3rd, 2019
3 months agosbp3 SBP-domain protein3: cDNA sequence with SSR's umc1572, umc1595
6.02
GRMZM2G101499
Parvathaneni, RK et al. 2020. Genome Biol 21:165     Reference: July 6th, 2020
Gene Product: July 5th, 2019
Variation: September 1st, 2003
Gene Model: December 18th, 2014
3 months agotcptf14 TCP-transcription factor 14: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Parvathaneni, RK et al. 2020. Genome Biol 21:165     Reference: July 6th, 2020
Gene Product: September 27th, 2019
3 months agotcptf21 TCP-transcription factor 21: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Parvathaneni, RK et al. 2020. Genome Biol 21:165     Reference: July 6th, 2020
Gene Product: September 27th, 2019
3 months agotcptf25 TCP-transcription factor 25: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Parvathaneni, RK et al. 2020. Genome Biol 21:165     Reference: July 6th, 2020
Gene Product: September 27th, 2019
3 months agotcptf4 TCP-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Parvathaneni, RK et al. 2020. Genome Biol 21:165     Reference: July 6th, 2020
Gene Product: September 27th, 2019
3 months agotsh1 tassel sheath1: leaves develop at base of tassel branches and spikelet pairstsh1 was positionally cloned by Whipple et al, 2010. It was initially mapped between umc2059 and bnlg1740. The position was narrowed using a larger population, synteny with rice provided two candidate genes, one was selected based on sequencing differences from progenitors for three independent EMS alleles.
6.07
   Jiang, L et al. 2020. Int J Agric Biol 23:637-643     Reference: July 6th, 2020
Gene Product: December 6th, 2019
Variation: October 6th, 2011
3 months agomad2 mitotic arrest deficient homolog2: A CENPC homologue
 
GRMZM2G047143
Yu, HG et al. 1999. J Cell Biol 145:425-435     Reference: September 1st, 2003
Gene Product: July 6th, 2020
Gene Model: July 6th, 2020
3 months agorgd2 ragged seedling2: mutant expression is variable from reduced midrib/moderately narrow leaf to filamentous or even radial leaves
1.04
GRMZM5G852170
Lopez-Ruiz, BA et al. 2020. Plants 9:849     Reference: July 6th, 2020
Gene Product: August 12th, 2016
Variation: July 6th, 2010
Gene Model: August 17th, 2017
3 months agonced3 nine-cis-epoxycarotenoid dioxygenase3:
 
GRMZM5G858784
Parvathaneni, RK et al. 2020. Genome Biol 21:165     Reference: July 6th, 2020
Gene Product: September 20th, 2012
Gene Model: September 20th, 2012
3 months agodbp4 DRE-binding protein4: AP2/ERF transcription factor; confers resistance to drought and cold when transferred to Arabidopsis
 
GRMZM2G380377
Xiao, SL et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.07.002     Reference: July 6th, 2020
Gene Product: April 10th, 2013
Variation: April 10th, 2013
Gene Model: February 16th, 2012
3 months agoga20ox5 gibberellin 20-oxidase5:
 
GRMZM2G049418
Parvathaneni, RK et al. 2020. Genome Biol 21:165     Reference: July 6th, 2020
Gene Product: October 28th, 2014
Variation: July 6th, 2017
Gene Model: October 29th, 2014
3 months agowox4 wuschel-related homeobox4: embryonic WUSCHEL homeobox transcription factor specific to hypocotyl vascular system Nardmann et al 207
 
   Parvathaneni, RK et al. 2020. Genome Biol 21:165     Reference: July 6th, 2020
Gene Product: August 25th, 2017
Variation: May 1st, 2016
3 months agoincw7 invertase cell wall7:
 
GRMZM2G018716
Huang, XJ et al. 2020. Int J Biol Macromol pp.doi: 10.1016/j.ijbiomac.2020.06.254     Reference: July 6th, 2020
Gene Product: June 12th, 2018
Gene Model: June 12th, 2018
3 months agoinvinh4 invertase inhibitor4: inhibits both cell wall and vacuolar invertase activities from maize leaves
 
GRMZM2G368698
Huang, XJ et al. 2020. Int J Biol Macromol pp.doi: 10.1016/j.ijbiomac.2020.06.254     Reference: July 6th, 2020
Gene Product: August 7th, 2019
Gene Model: August 24th, 2019
3 months agogata11 C2C2-GATA-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to GATA transcription factor 6 of A. thaliana
2.03
   Jiang, L et al. 2020. Int J Agric Biol 23:637-643     Reference: July 6th, 2020
Variation: September 25th, 2007
3 months agoumc2558  :
9.04
GRMZM2G020468
Lopez-Ruiz, BA et al. 2020. Plants 9:849     Reference: July 6th, 2020
Variation: January 22nd, 2019
Gene Model: January 23rd, 2019
3 months agomas1 malate synthase1: cDNA isolated by antibody screen
2.04
GRMZM2G102183
McLoughlin, F et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00226     Reference: July 3rd, 2020
Gene Product: September 1st, 2003
Variation: January 10th, 2013
Gene Model: November 20th, 2014
3 months agoppt1 plastid phosphate/phosphoenolpyruvate translocator1:
2.06
GRMZM2G047404
Zhang, QB et al. 2020. BMC Plant Biology 20:315     Reference: July 3rd, 2020
Gene Product: September 1st, 2003
Gene Model: October 9th, 2014
3 months agosweet3a sugars will eventually be exported transporter3a:
8.04
GRMZM2G179679
Zhang, QB et al. 2020. BMC Plant Biology 20:315     Reference: July 3rd, 2020
Gene Product: November 4th, 2015
Gene Model: September 19th, 2018
3 months agosweet4b sugars will eventually be exported transporter4b:
5.04
GRMZM2G144581
Zhang, QB et al. 2020. BMC Plant Biology 20:315     Reference: July 3rd, 2020
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
3 months agopep2 phosphoenolpyruvate carboxylase2: cDNA sequence, encodes C3 enzyme in roots (Northern blot analysis)
5.04
GRMZM2G069542
Zhang, QB et al. 2020. BMC Plant Biology 20:315     Reference: July 3rd, 2020
Gene Product: September 1st, 2003
Variation: October 1st, 2014
Gene Model: August 13th, 2014
3 months agotpt1 triose phosphate translocator1: cDNA sequence similar to plant triosephospate/phosphate translocators
 
   Zhang, QB et al. 2020. BMC Plant Biology 20:315     Reference: July 3rd, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
3 months agohex7 hexokinase7:
 
GRMZM2G051806
McLoughlin, F et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00226     Reference: July 3rd, 2020
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
3 months agosweet17a sugars will eventually be exported transporter17a:
 
GRMZM2G106462
Zhang, QB et al. 2020. BMC Plant Biology 20:315     Reference: July 3rd, 2020
Gene Product: November 4th, 2015
Variation: February 23rd, 2019
Gene Model: November 3rd, 2015
3 months agoatg12 autophagy12: Mutants are phenotypically normal and fertile when grown under nutrient-rich conditions. However, when nitrogen-starved, seedling growth is severely arrested, and as the plants mature, they show enhanced leaf senescence and stunted ear development.
 
GRMZM5G842517
McLoughlin, F et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00226     Reference: July 3rd, 2020
Variation: August 15th, 2017
Gene Model: August 15th, 2017
3 months agoxat1 xylan α-1,3-arabinofuranosyl-transferase1:
 
GRMZM2G096946
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 3rd, 2020
Gene Model: July 2nd, 2020
3 months agoxat2 xylan α-1,3-arabinofuranosyl-transferase2:
 
   Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 3rd, 2020
3 months agoxat3 xylan α-1,3-arabinofuranosyl-transferase3:
 
GRMZM2G447347
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 3rd, 2020
Gene Model: July 2nd, 2020
3 months agosweet6a sugars will eventually be exported transporter6a: similar to nodulin MtN3-like protein of A. thaliana
3.09
GRMZM2G157675
Zhang, QB et al. 2020. BMC Plant Biology 20:315     Reference: July 3rd, 2020
Gene Product: November 4th, 2015
Variation: March 31st, 2005
Gene Model: November 3rd, 2015
3 months agomagi93696  :
10.04
GRMZM2G476555
    Variation: March 31st, 2005
Gene Model: July 3rd, 2020
3 months agocesa10 cellulose synthase10: gene exhibits coexpression with the genes cesa11 and cesa12.
1.08
GRMZM2G445905
Zhang, QB et al. 2020. BMC Plant Biology 20:315     Reference: July 3rd, 2020
Gene Product: October 7th, 2016
Gene Model: July 22nd, 2015
3 months agocesa11 cellulose synthase 11: coordinately expressed with loci cesa10 and cesa12
3.07
GRMZM2G055795
Zhang, QB et al. 2020. BMC Plant Biology 20:315     Reference: July 3rd, 2020
Gene Product: October 7th, 2016
Gene Model: July 22nd, 2015
3 months agocesa12 cellulose synthase 12: coordinately expressed with cesa10 and cesa11
7.02
GRMZM2G142898
Zhang, QB et al. 2020. BMC Plant Biology 20:315     Reference: July 3rd, 2020
Gene Product: October 7th, 2016
Gene Model: July 22nd, 2015
3 months agosus2 sucrose synthase2: Encodes sucrose synthase-2 (SUS2), one of 3 loci defined for this function; compare sh1 and sus1.
1.04
GRMZM2G318780
Zhang, QB et al. 2020. BMC Plant Biology 20:315     Reference: July 3rd, 2020
Gene Product: October 25th, 2006
Variation: February 1st, 2020
Gene Model: August 3rd, 2013
3 months agocesa9 cellulose synthase9: cDNA
2.06
   Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: October 7th, 2016
Variation: January 3rd, 2014
3 months agoxt4 beta-1,4-xylosyltransferase4:
3.05
GRMZM2G056702
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 2nd, 2020
Gene Model: April 4th, 2020
3 months agocesa13 cellulose synthase13: NCBI: cellulose synthase A catalytic subunit 4 [UDP-forming]-like
 
GRMZM2G037413
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: October 7th, 2016
Gene Model: April 1st, 2017
3 months agocesa14 cellulose synthase14:
 
   Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: October 7th, 2016
3 months agocesa15 cellulose synthase15:
 
GRMZM2G339645
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: October 7th, 2016
Gene Model: July 2nd, 2020
3 months agoxt2 beta-1,4-xylosyltransferase2:
 
GRMZM2G448834
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 2nd, 2020
Gene Model: July 2nd, 2020
3 months agoxt3 beta-1,4-xylosyltransferase3:
 
   Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 2nd, 2020
3 months agoxt5 beta-1,4-xylosyltransferase5:
 
GRMZM5G898668
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 2nd, 2020
Gene Model: July 2nd, 2020
3 months agoxt6 beta-1,4-xylosyltransferase6:
 
GRMZM2G000581
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 2nd, 2020
Gene Model: July 2nd, 2020
3 months agoxt7 beta-1,2-xylosyltransferase7:
 
GRMZM2G354610
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: February 10th, 2020
Gene Model: July 2nd, 2020
3 months agoxt8 beta-1,2-xylosyltransferase8:
 
   Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: February 10th, 2020
3 months agoxt9 beta-1,2-xylosyltransferase9:
 
GRMZM2G074896
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: February 10th, 2020
Gene Model: July 2nd, 2020
3 months agoxt10 beta-1,2-xylosyltransferase10:
 
GRMZM2G022442
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: February 10th, 2020
Gene Model: July 2nd, 2020
3 months agoxgt1 xyloglucan glycosyltransferase1:
 
GRMZM2G142685
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 2nd, 2020
Gene Model: July 2nd, 2020
3 months agoxgt2 xyloglucan glycosyltransferase2:
 
GRMZM2G135286
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 2nd, 2020
Gene Model: July 2nd, 2020
3 months agoxgat1 xyloglucan galactosyltransferase1:
 
GRMZM2G075492
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 2nd, 2020
Gene Model: July 2nd, 2020
3 months agofut1 galactoside 2-alpha-L-fucosyltransferase1:
 
GRMZM2G096268
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 2nd, 2020
Gene Model: July 2nd, 2020
3 months agofut2 galactoside 2-alpha-L-fucosyltransferase2:
 
GRMZM2G127184
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 2nd, 2020
Gene Model: July 2nd, 2020
3 months agofut3 galactoside 2-alpha-L-fucosyltransferase3:
 
GRMZM2G080696
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 2nd, 2020
Gene Model: July 2nd, 2020
3 months agofut4 galactoside 2-alpha-L-fucosyltransferase4:
 
GRMZM2G387087
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 2nd, 2020
Gene Model: July 2nd, 2020
3 months agofut5 galactoside 2-alpha-L-fucosyltransferase5:
 
GRMZM2G471594
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 2nd, 2020
Gene Model: July 2nd, 2020
3 months agopmt1 pectin methyltransferase1:
 
GRMZM2G000764
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 2nd, 2020
Gene Model: July 2nd, 2020
3 months agopmt2 pectin methyltransferase2:
 
GRMZM2G140893
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 2nd, 2020
Gene Model: July 2nd, 2020
3 months agofut6 O-fucosyltransferase6:
 
GRMZM2G104511
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 2nd, 2020
Gene Model: July 2nd, 2020
3 months agoarad1 arabinosyltransferase1:
 
GRMZM2G060579
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 2nd, 2020
Gene Model: July 2nd, 2020
3 months agopza02421  :
4.08
   Zhang, XX et al. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-020-03639-4     Reference: July 1st, 2020
Gene Product: November 11th, 2017
Variation: September 25th, 2007
3 months agorip1 ribosome-inactivating protein1: electrophoretic mobility, seed-specific, abundant 32kD endosperm protein (b32 protein), cytosolic, inactivates rabbit (not maize or wheat) ribosomes; cDNA ZmRIP3, SSR phi014, phi060, umc1202
8.03
GRMZM2G063536
Zhang, XX et al. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-020-03639-4     Reference: July 1st, 2020
Gene Product: September 1st, 2003
Variation: April 19th, 2005
Gene Model: April 18th, 2017
3 months agormr2 required to maintain repression 2:
 
GRMZM2G009208
Zhang, XX et al. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-020-03639-4     Reference: July 1st, 2020
Gene Product: August 28th, 2012
Variation: August 28th, 2012
Gene Model: August 28th, 2012
3 months agohsftf23 HSF-transcription factor 23: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, XX et al. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-020-03639-4     Reference: July 1st, 2020
Gene Product: May 15th, 2020
3 months agosbp7 SBP-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, XX et al. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-020-03639-4     Reference: July 1st, 2020
Gene Product: July 5th, 2019
3 months agotcptf34 TCP-transcription factor 34: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, XX et al. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-020-03639-4     Reference: July 1st, 2020
Gene Product: September 27th, 2019
3 months agoatg13c autophagy13c:
2.03
GRMZM5G825909
Zhang, XX et al. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-020-03639-4     Reference: July 1st, 2020
Variation: July 29th, 2004
Gene Model: August 15th, 2017
3 months agorcc2 regulator of chromosome condensation2:
 
GRMZM2G003565
Fernandez, MB et al. 2020. Plant Growth Regulation pp.doi: 10.1007/s10725-020-00639-8   AT5G63860 (TAIR) Reference: July 1st, 2020
Variation: November 18th, 2016
Gene Model: November 18th, 2016
3 months agodbb2 double B-box zinc finger protein2:
 
GRMZM2G131982
Zhang, XX et al. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-020-03639-4     Reference: July 1st, 2020
Gene Product: May 10th, 2017
Gene Model: May 10th, 2017
3 months agoupl13 ubiquitin-protein ligase13:
 
GRMZM2G104920
Fernandez, MB et al. 2020. Plant Growth Regulation pp.doi: 10.1007/s10725-020-00639-8   AT2G32950 (TAIR) Reference: July 1st, 2020
Gene Product: March 26th, 2020
Gene Model: March 26th, 2020
3 months agorup1 repressor of UV-B photomorphogenesis homolog1:
 
GRMZM2G389155
Fernandez, MB et al. 2020. Plant Growth Regulation pp.doi: 10.1007/s10725-020-00639-8   AT5G23730 (TAIR) Reference: July 1st, 2020
Gene Product: July 1st, 2020
Gene Model: July 1st, 2020
3 months agoAY111254  :
3.09
GRMZM2G089351
Zhang, XX et al. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-020-03639-4     Reference: July 1st, 2020
Variation: September 25th, 2007
Gene Model: April 9th, 2020
3 months agocyp11 cytochrome P450 11: Transcript induced by naphthalic anhydride or triasulfuron herbicide
3.09
GRMZM2G129860
Zhang, XX et al. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-020-03639-4     Reference: July 1st, 2020
Gene Product: September 26th, 2016
Variation: January 22nd, 2010
Gene Model: April 30th, 2013
3 months agomyb103 MYB-transcription factor 103: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.06
   Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Variation: September 25th, 2007
3 months agocsu861  :
2.03
GRMZM2G001241
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Variation: September 1st, 2003
Gene Model: March 13th, 2020
3 months agosacd11 stearoyl-acyl-carrier-protein desaturase11:
10.04
AC215690.3_FG002
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: October 10th, 2016
Gene Model: October 10th, 2016
3 months agosacd3 stearoyl-acyl-carrier-protein desaturase3:
1.05
   Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: October 10th, 2016
Variation: November 3rd, 2017
3 months agohb2 hemoglobin2: suppression of expression is associated with programmed cell death (Huang et al 2014)
6.06
GRMZM2G168898
Jiang, SQ et al. 2020. Frontiers Plant Sci 11:861     Reference: June 30th, 2020
Gene Product: February 20th, 2018
Gene Model: May 15th, 2014
3 months agoplt2 phospholipid transfer protein homolog2: amino acid sequence, deduced from coleoptile cDNA; SSR locus umc1010
3.09
   Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
3 months agogl1 glossy1: cuticle wax altered; leaf surface bright, water adheres
7.02
   Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: September 1st, 2003
Variation: October 26th, 2006
3 months agogl2 glossy2: like gl1, but surface wax is all rice-grain-type particles
2.02
   Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117   AT4G24510 (TAIR) Reference: June 30th, 2020
Gene Product: February 28th, 2020
Variation: December 7th, 2012
3 months agogl4 glossy4: (was gl16) like gl1, but surface wax has reduced number of star-type particles
4.06
GRMZM2G003501
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: November 1st, 2018
Variation: November 1st, 2018
Gene Model: October 31st, 2018
3 months agogl8 glossy8: (was gl10) like gl1; cuticle wax in rice-grain-type particles; cDNA probesimilar to Arabidopsis beta-ketoacyl reductase 1
5.05
   Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: September 1st, 2003
Variation: June 14th, 2012
3 months agohsf1 hairy sheath frayed1: dominant Hsf1 plants have pubescent sheaths and leaf margins; liguled enations at leaf marginscytokinin receptor; cytokinin responsive histidine protein kinase
5.06 - 5.07
GRMZM2G151223
Muszynski, MG, et al. 2020. Plant Cell. 0:doi; 10.1105/tpc.19.00677     Reference: June 30th, 2020
Gene Product: May 20th, 2016
Variation: August 23rd, 2019
Gene Model: August 23rd, 2019
3 months agoumc1177  : nonspecific lipid-transfer protein identified in CERES sequences
1.01
GRMZM2G137329
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Variation: March 9th, 2016
Gene Model: March 9th, 2016
3 months agoumc1318  :
10.01
GRMZM2G093997
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Variation: September 1st, 2003
Gene Model: September 16th, 2017
3 months agoumc1411a  : NCBI: anther-specific proline-rich protein APGNCBI: similar to Arabidopsis GDSL esterase/lipase
1.09
   Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Variation: September 1st, 2003
3 months agoumc1447  :
5.03
GRMZM2G137694
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Variation: September 1st, 2003
Gene Model: June 23rd, 2018
3 months agoiaa38 Aux/IAA-transcription factor 38: similar to Arabidopsis auxin-responsive protein IAA27Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.04
GRMZM2G035465
Ramos Baez, R, et al. 2020. Plant Physiol. 0:doi: 10.1104/pp.19.01475     Reference: June 30th, 2020
Variation: September 1st, 2003
Gene Model: September 19th, 2018
3 months agogl13 glossy13: necrotic glossy leaf; plants that survive to maturity are sterile (both male and female) and smaller than nonmutant sibs.Ortholog of Poales ATP-binding cassette transporter, PDR-like subfamily G, domain 1
 
GRMZM2G118243
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: December 28th, 2015
Variation: December 19th, 2013
Gene Model: December 9th, 2013
3 months agoiaa4 Aux/IAA-transcription factor4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.10
GRMZM2G159285
Ramos Baez, R, et al. 2020. Plant Physiol. 0:doi: 10.1104/pp.19.01475     Reference: June 30th, 2020
Variation: November 15th, 2016
Gene Model: November 15th, 2016
3 months agoumc1594  :
3.09
GRMZM2G107839
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Variation: September 1st, 2003
Gene Model: September 16th, 2017
3 months agoiaa28 Aux/IAA-transcription factor 28: gene product physically interacts with LA1 (Dong et al 2013)Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Ramos Baez, R, et al. 2020. Plant Physiol. 0:doi: 10.1104/pp.19.01475     Reference: June 30th, 2020
Variation: July 8th, 2017
3 months agomyb151 MYB-transcription factor 151: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117   AT4G37780 (TAIR) Reference: June 30th, 2020
Gene Product: July 25th, 2017
3 months agowrky111 WRKY-transcription factor 111: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: July 24th, 2017
Variation: July 24th, 2017
3 months agophyA1 phytochromeA1: red/far red light signal receptor; major phytochrome A transcript in seedling leaf blade, sheath and mesocotyl under dark light conditions; is greatly reduced in white or red light. See also phyA2, phyB1, phyB2, phyC1, phyC2.
1.10
GRMZM2G157727
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: June 30th, 2009
Variation: September 25th, 2007
Gene Model: August 13th, 2014
3 months agophyA2 phytochromeA2: red/far red light signal receptor; minor phytochrome A trancript in dark grown seedling leaf blade, sheath, mesocotyl. See also phyA1, phyB1, phyB2, phyC1, phyC2
5.01
GRMZM2G181028
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: June 30th, 2009
Variation: September 1st, 2003
Gene Model: August 13th, 2014
3 months agogpat1 glycerol-3-phosphate acyltransferase1:
3.06
GRMZM2G083195
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: March 25th, 2019
Variation: March 23rd, 2015
Gene Model: March 24th, 2015
3 months agoplt1 phospholipid transfer protein homolog1: amino acid sequence, deduced from coleoptile cDNA, homologous to phospholipid transfer proteins
3.06
GRMZM2G101958
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: September 1st, 2003
Variation: March 17th, 2015
Gene Model: March 12th, 2015
3 months agokcs13 3-ketoacyl-CoA synthase13:
1.02
GRMZM2G445602
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: November 1st, 2018
Gene Model: September 2nd, 2018
3 months agogl26 glossy26: like gl1similar to Arabidopsis enoyl reductase
8.02
GRMZM2G481843
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: October 31st, 2018
Variation: October 31st, 2018
Gene Model: September 17th, 2018
3 months agocer8 eceriferum8: mutant seedlings displayed a typical glossy phenotype
10.03
GRMZM2G101875
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117   AT2G47240 (TAIR) Reference: June 30th, 2020
Gene Product: October 31st, 2018
Variation: October 31st, 2018
Gene Model: January 23rd, 2018
3 months agoMuk Mu killer: Mu killer methylates mutator TIRs and acts dominantly to silence active Mutator systems.
 
   Burgess, D; Li, H; Zhao, M; Kim, SY; Lisch, D. 2020. Genetics. 215:379-391     Reference: June 30th, 2020
Variation: November 12th, 2004
3 months agorum1 rootless with undetectable meristems1: primordia for seminal roots and for laterals on the primary root absent
 
GRMZM2G037368
Ramos Baez, R, et al. 2020. Plant Physiol. 0:doi: 10.1104/pp.19.01475     Reference: June 30th, 2020
Gene Product: June 16th, 2014
Variation: June 16th, 2014
Gene Model: June 16th, 2014
3 months agorul1 rum1-like1:
 
GRMZM2G163848
Ramos Baez, R, et al. 2020. Plant Physiol. 0:doi: 10.1104/pp.19.01475     Reference: June 30th, 2020
Variation: November 18th, 2011
Gene Model: November 17th, 2011
3 months agosacd5 stearoyl-acyl-carrier-protein desaturase5:
 
GRMZM2G026793
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: October 10th, 2016
Gene Model: October 10th, 2016
3 months agosacd7 stearoyl-acyl-carrier-protein desaturase7:
 
GRMZM2G073540
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: October 10th, 2016
Gene Model: October 10th, 2016
3 months agogpat7 glycerol-3-phosphate acyltransferase7:
 
GRMZM2G064590
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: March 25th, 2019
Gene Model: March 25th, 2019
3 months agogpat20 glycerol-3-phosphate acyltransferase20:
 
GRMZM2G075295
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: March 25th, 2019
Gene Model: April 25th, 2019
3 months agocyp28 cytochrome P-450 28:
 
GRMZM2G132478
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: March 25th, 2019
Gene Model: January 7th, 2020
3 months agokcs19 3-ketoacyl-CoA synthase19:
 
GRMZM2G062718
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: November 1st, 2018
Gene Model: February 13th, 2020
3 months agokcs9 3-ketoacyl-CoA synthase9:
 
GRMZM2G104626
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: November 1st, 2018
Gene Model: February 13th, 2020
3 months agokcs11 3-ketoacyl-CoA synthase11:
 
GRMZM2G149636
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: November 1st, 2018
Gene Model: February 13th, 2020
3 months agokcs24 3-ketoacyl-CoA synthase24:
 
GRMZM5G894016
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: November 1st, 2018
Gene Model: February 13th, 2020
3 months agocer1 eceriferum1:
 
GRMZM2G075255
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: February 13th, 2020
Gene Model: February 13th, 2020
3 months agocer2 eceriferum2:
 
GRMZM2G029912
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: February 13th, 2020
Gene Model: February 13th, 2020
3 months agolacs2 long chain acyl-CoA synthetase2:
 
GRMZM2G104847
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: October 31st, 2018
Gene Model: February 13th, 2020
3 months agohcd1 3-hydroxyacyl-CoA dehydratase1:
 
GRMZM2G151087
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: June 30th, 2020
Gene Model: June 30th, 2020
3 months agoadd1 alternative discordia1:
8.05
GRMZM2G050800
Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Variation: March 6th, 2009
Gene Model: June 30th, 2020
3 months agoIDP2589  :
2.07
GRMZM2G102878
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Variation: March 31st, 2005
Gene Model: February 20th, 2019
3 months agoplt3 phospholipid transfer protein homolog3:
3.06
GRMZM2G126397
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: September 1st, 2003
Variation: January 8th, 2017
Gene Model: January 6th, 2017
3 months agoabcg11 ABC transporter G family member 11: Ortholog of Arabidopsis ABCG11/COF1/WBC11. Plasma membrane-localized ATP-binding cassette transporter; cutin transport to extracellular matrix. (A. Barkan, 2015)Ortholog of Arabidopsis ABCG11/COF1/WBC11, a plasma membrane- localized ATP-binding cassette transporter; cutin transport to extracellular matrix
2.02
GRMZM2G177812
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: December 28th, 2015
Variation: December 30th, 2015
Gene Model: February 17th, 2015
3 months agophyC1 phytochromeC1: red/far red light signal receptor; major phytochrome C trancript in light and dark grown seedling leaf blade, sheath, mesocotyl. See also phyC2, phyA1, phyA2 phyB1, phyB2.
1.10
   Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: June 30th, 2009
Variation: June 30th, 2009
3 months agophyC2 phytochromeC2: red/far red light signal receptor; minor phytochrome C transcript in seedling leaf blade, sheath, mesocotyl. See also phyC1, phyA1, phyA2 phyB1, phyB2.
5.01
   Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: June 30th, 2009
Variation: June 30th, 2009
3 months agomn2 miniature seed2: small kernel, loose pericarp; extremely defective but will germinate
7.02 - 7.06
GRMZM2G156794
Guan, HY et al. 2020. J Integ Agric. 19:1961-1973     Reference: June 29th, 2020
Gene Product: September 1st, 2003
Variation: June 29th, 2020
Gene Model: June 29th, 2020
4 months agocsu1005  :
9.07
GRMZM2G096348
Baysdorfer, C. 1996. Nucleotide sequence submission to dbEST     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: June 27th, 2020
4 months agoamt2 ammonium transporter2:
 
GRMZM2G028736
Hao, D-L et al. 2020. Frontiers Plant Sci 11:884     Reference: June 27th, 2020
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
4 months agoamt3 ammonium transporter3:
 
GRMZM2G118950
Hao, D-L et al. 2020. Frontiers Plant Sci 11:884     Reference: June 27th, 2020
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
4 months agogpm937b  :
9.07
GRMZM2G178787
    Variation: April 4th, 2007
Gene Model: June 27th, 2020
4 months agouaz7c01f11  :
 
GRMZM2G113159
    Variation: September 1st, 2003
Gene Model: June 26th, 2020
4 months agoumc1310  :
9.06
GRMZM5G826763
    Variation: September 1st, 2003
Gene Model: June 26th, 2020
4 months agoumc1794  :
9.06
GRMZM2G031447
    Variation: September 1st, 2003
Gene Model: June 26th, 2020
4 months agoasrp2 arginine/serine-rich splicing factor2: RNA binding nuclear splicing protein
2.05
GRMZM2G021223
Gupta, S et al. 2005. Biochim Biophys Acta 1728:105-114     Reference: March 16th, 2009
Gene Product: June 25th, 2020
Variation: February 7th, 2009
Gene Model: February 1st, 2018
4 months agouce10 ubiquitin conjugating enzyme10: similar to Arabidopsis Ubiquitin-conjugating enzyme family protein
6.07
GRMZM2G381709
Zhong, YT et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00378   AT2G33770 (TAIR) Reference: June 25th, 2020
Gene Product: December 19th, 2019
Variation: July 29th, 2004
Gene Model: June 25th, 2020
4 months agogpx5 glycerophosphodiester phosphodiesterase5:
1.08
GRMZM2G058227
Wang, JX et al. 2020. Crop J. doi: 10.1016/j.cj.2020.05.004     Reference: June 25th, 2020
Gene Product: June 24th, 2020
Gene Model: February 14th, 2020
4 months agogpx3 glycerophosphodiester phosphodiesterase3:
1.06
GRMZM2G064962
Wang, JX et al. 2020. Crop J. doi: 10.1016/j.cj.2020.05.004     Reference: June 25th, 2020
Gene Product: June 24th, 2020
Gene Model: February 10th, 2020
4 months agopht7 phosphate transporter protein7:
 
GRMZM2G112377
Zhong, YT et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00378     Reference: June 25th, 2020
Gene Product: June 16th, 2016
Variation: February 4th, 2011
Gene Model: May 27th, 2015
4 months agophos4 phosphate transporter4:
 
GRMZM2G064657
Zhong, YT et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00378   AT1G68740 (TAIR) Reference: June 25th, 2020
Gene Product: February 27th, 2016
Gene Model: February 27th, 2016
4 months agopht9 phosphate transporter protein9:
 
GRMZM2G070087
Zhong, YT et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00378     Reference: June 25th, 2020
Gene Product: June 16th, 2016
Gene Model: June 16th, 2016
4 months agogpx1 glycerophosphodiester phosphodiesterase1: catalyses the degradation of glycerophosphodiesters promoting phosphate recycling from senescing leaves to new leaves
 
GRMZM2G018820
Wang, JX et al. 2020. Crop J. doi: 10.1016/j.cj.2020.05.004     Reference: June 25th, 2020
Gene Product: June 24th, 2020
Gene Model: June 24th, 2020
4 months agogpx2 glycerophosphodiester phosphodiesterase2:
 
GRMZM5G829946
Wang, JX et al. 2020. Crop J. doi: 10.1016/j.cj.2020.05.004     Reference: June 25th, 2020
Gene Product: June 24th, 2020
Gene Model: June 24th, 2020
4 months agogpx4 glycerophosphodiester phosphodiesterase4:
 
GRMZM2G045753
Wang, JX et al. 2020. Crop J. doi: 10.1016/j.cj.2020.05.004     Reference: June 25th, 2020
Gene Product: June 24th, 2020
Gene Model: June 24th, 2020
4 months agogpx6 glycerophosphodiester phosphodiesterase6:
 
GRMZM2G153274
Wang, JX et al. 2020. Crop J. doi: 10.1016/j.cj.2020.05.004     Reference: June 25th, 2020
Gene Product: June 24th, 2020
Gene Model: June 24th, 2020
4 months agogpx7 glycerophosphodiester phosphodiesterase7:
 
GRMZM2G017550
Wang, JX et al. 2020. Crop J. doi: 10.1016/j.cj.2020.05.004     Reference: June 25th, 2020
Gene Product: June 24th, 2020
Gene Model: June 24th, 2020
4 months agogpx8 glycerophosphodiester phosphodiesterase8:
 
GRMZM2G038001
Wang, JX et al. 2020. Crop J. doi: 10.1016/j.cj.2020.05.004     Reference: June 25th, 2020
Gene Product: June 24th, 2020
Gene Model: June 24th, 2020
4 months agogpx9 glycerophosphodiester phosphodiesterase9:
 
GRMZM2G103382
Wang, JX et al. 2020. Crop J. doi: 10.1016/j.cj.2020.05.004     Reference: June 25th, 2020
Gene Product: June 24th, 2020
Gene Model: June 24th, 2020
4 months agogpx10 glycerophosphodiester phosphodiesterase10:
 
GRMZM2G018416
Wang, JX et al. 2020. Crop J. doi: 10.1016/j.cj.2020.05.004     Reference: June 25th, 2020
Gene Product: June 24th, 2020
Gene Model: June 24th, 2020
4 months agogpx11 glycerophosphodiester phosphodiesterase11:
 
GRMZM2G013324
Wang, JX et al. 2020. Crop J. doi: 10.1016/j.cj.2020.05.004     Reference: June 25th, 2020
Gene Product: June 24th, 2020
Gene Model: June 24th, 2020
4 months agogpx12 glycerophosphodiester phosphodiesterase12:
 
GRMZM2G060194
Wang, JX et al. 2020. Crop J. doi: 10.1016/j.cj.2020.05.004     Reference: June 25th, 2020
Gene Product: June 24th, 2020
Gene Model: June 24th, 2020
4 months agogpx13 glycerophosphodiester phosphodiesterase13:
 
GRMZM2G059129
Wang, JX et al. 2020. Crop J. doi: 10.1016/j.cj.2020.05.004     Reference: June 25th, 2020
Gene Product: June 24th, 2020
Gene Model: June 24th, 2020
4 months agogpx14 glycerophosphodiester phosphodiesterase14:
 
GRMZM2G481904
Wang, JX et al. 2020. Crop J. doi: 10.1016/j.cj.2020.05.004     Reference: June 25th, 2020
Gene Product: June 24th, 2020
Gene Model: June 24th, 2020
4 months agosrp32 serine residues protein32:
 
GRMZM2G436092
Gao, H; Gordon-Kamm, WJ; Lyznik, LA. 2004. Gene. 33:25-37     Reference: March 7th, 2005
Gene Product: June 25th, 2020
Gene Model: June 25th, 2020
4 months agosrp30 serine residues protein30:
 
GRMZM2G331811
Gao, H; Gordon-Kamm, WJ; Lyznik, LA. 2004. Gene. 33:25-37     Reference: March 7th, 2005
Gene Product: June 25th, 2020
Gene Model: June 25th, 2020
4 months agoccd9 carotenoid cleavage dioxygenase9: probable involvement regulatory pathway that adjusts Pi allocation
 
GRMZM2G164967
Zhong, YT et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00378     Reference: June 25th, 2020
Gene Product: September 20th, 2012
Gene Model: June 25th, 2020
4 months agoccd10 carotenoid cleavage dioxygenase10:
 
AC197699.3_FG002
Zhong, YT et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00378     Reference: June 25th, 2020
Gene Product: September 20th, 2012
Gene Model: June 25th, 2020
4 months agopco138567b  :
9.04
GRMZM5G862107
    Variation: September 25th, 2007
Gene Model: June 25th, 2020
4 months agoasrp1 arginine/serine-rich splicing factor1: RNA binding nuclear splicing protein
10.04
GRMZM2G052166
Gupta, S et al. 2005. Biochim Biophys Acta 1728:105-114     Reference: March 16th, 2009
Gene Product: June 25th, 2020
Variation: February 7th, 2009
Gene Model: January 3rd, 2018
4 months agosrp31 serine residues protein31:
6.05
GRMZM2G170365
Gao, H; Gordon-Kamm, WJ; Lyznik, LA. 2004. Gene. 33:25-37     Reference: March 7th, 2005
Gene Product: June 25th, 2020
Gene Model: January 8th, 2020
4 months agosod9 superoxide dismutase9: cytosolic Cu/Zn enzyme, cDNA and genomic clones; SSR umc1094
9.04
   Kong, XY et al. 2020. Plant Soil pp.doi: 10.1007/s11104-020-04605-1     Reference: June 22nd, 2020
Gene Product: February 12th, 2007
Variation: January 21st, 2015
4 months agomgt1 magnesium transporter1: encodes CorA/MRS2/MGT-type magnesium transporter
 
GRMZM2G108477
Kong, XY et al. 2020. Plant Soil pp.doi: 10.1007/s11104-020-04605-1     Reference: June 22nd, 2020
Gene Product: April 18th, 2016
Gene Model: April 18th, 2016
4 months agomgt8 magnesium transporter8: encodes CorA/MRS2/MGT-type magnesium transporter
 
GRMZM2G065971
Kong, XY et al. 2020. Plant Soil pp.doi: 10.1007/s11104-020-04605-1     Reference: June 22nd, 2020
Gene Product: April 18th, 2016
Gene Model: April 18th, 2016
4 months agomgt9 magnesium transporter9: encodes CorA/MRS2/MGT-type magnesium transporter
 
GRMZM2G139822
Kong, XY et al. 2020. Plant Soil pp.doi: 10.1007/s11104-020-04605-1     Reference: June 22nd, 2020
Gene Product: April 18th, 2016
Gene Model: April 18th, 2016
4 months agoprh23 protein phosphatase homolog23: encodes a protein phosphatase type 2C
 
GRMZM2G047376
Broz, A et al. 2001. J Exp Bot 52:1739-1740     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Gene Model: June 22nd, 2020
4 months agopx15 peroxidase15: expression enhanced by Mg application
 
GRMZM2G108123
Kong, XY et al. 2020. Plant Soil pp.doi: 10.1007/s11104-020-04605-1     Reference: June 22nd, 2020
Gene Product: September 18th, 2015
Gene Model: June 22nd, 2020
4 months agosod10 superoxide dismutase10: expression enhanced by Mg application
 
GRMZM2G124455
Kong, XY et al. 2020. Plant Soil pp.doi: 10.1007/s11104-020-04605-1     Reference: June 22nd, 2020
Gene Product: September 1st, 2003
Gene Model: June 22nd, 2020
4 months agotps17 terpene synthase17:
 
GRMZM2G010356
Liang, J et al. 2020. Biochemistry pp.doi: 10.1021/acs.biochem.0c00395     Reference: June 20th, 2020
Variation: July 17th, 2016
Gene Model: July 17th, 2016
4 months agodmp1 DUF679 domain membrane protein1: mutants enhance haploid induction
 
GRMZM2G465053
Vanous, K et al. 2020. Plants 9:773     Reference: June 20th, 2020
Gene Product: June 10th, 2019
Variation: June 10th, 2019
Gene Model: June 10th, 2019
4 months agomyo4 myosin4: may contribute to haploid induction rate due to qhir8
 
GRMZM2G435294
Vanous, K et al. 2020. Plants 9:773     Reference: June 20th, 2020
Gene Product: September 1st, 2003
Variation: June 20th, 2020
Gene Model: June 20th, 2020
4 months agospds1 spermidine synthase1: up-regulated by salt stress; regulated at the transcriptional level by ABA
2.06
GRMZM2G064163
Jimenez-Bremont, JF et al. 2007. Plant Physiol Biochem 45:812-821     Reference: June 19th, 2020
Gene Product: June 19th, 2020
Gene Model: March 18th, 2020
4 months agosrl5 semi-rolled leaf5: required for the structure formation of the cuticular wax and could increase the drought tolerance by maintaining the proper cuticular wax structure in maize
 
GRMZM2G139852
Pan, ZY et al. 2020. J Integr Plant Biol pp.doi: 10.1111/jipb.12982     Reference: June 17th, 2020
Gene Product: June 17th, 2020
Variation: June 17th, 2020
Gene Model: June 17th, 2020
4 months agoumc1497  :
2.07
GRMZM2G106393
    Variation: June 16th, 2020
Gene Model: June 16th, 2020
4 months agoprp5 pathogenesis related protein5:
1.06
GRMZM2G402631
Zang, ZY et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00850     Reference: June 16th, 2020
Gene Product: July 25th, 2018
Variation: August 20th, 2011
Gene Model: October 30th, 2015
4 months agolox1 lipoxygenase1: Full length cDNA is expressed in E. coli (Kim et al. 2003)
3.06
   Zang, ZY et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00850     Reference: June 16th, 2020
Gene Product: November 13th, 2014
Variation: July 24th, 2008
4 months agopx14 peroxidase14:
2.03
GRMZM2G108219
Shi, FM et al. 2018. Gene 659:100-108     Reference: June 16th, 2020
Gene Product: September 18th, 2015
Variation: February 22nd, 2015
Gene Model: February 23rd, 2015
4 months agomkkk10 MAP kinase kinase kinase10: Function inferred from sequence similarilty
 
GRMZM2G180555
Shi, FM et al. 2018. Gene 659:100-108     Reference: June 16th, 2020
Gene Product: July 10th, 2013
Gene Model: July 11th, 2013
4 months agoprp6 pathogenesis-related protein6: encoded protein exerted broad spectrum antifungal activity
 
GRMZM2G112488
Zang, ZY et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00850     Reference: June 16th, 2020
Gene Product: July 25th, 2018
Gene Model: September 30th, 2017
4 months agomkk2 mitogen-activated protein kinase kinase2:
 
GRMZM2G400470
Shi, FM et al. 2018. Gene 659:100-108   AT4G29810 (TAIR) Reference: June 16th, 2020
Gene Product: July 12th, 2013
Gene Model: September 22nd, 2018
4 months agompk19 MAP kinase19:
 
GRMZM2G007848
Shi, FM et al. 2018. Gene 659:100-108     Reference: June 16th, 2020
Gene Product: July 12th, 2013
Gene Model: December 13th, 2019
4 months agodrg6 dark response gene6:
 
GRMZM2G112538
Zang, ZY et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00850     Reference: June 16th, 2020
Gene Product: July 25th, 2018
Gene Model: June 6th, 2020
4 months agoprp8 pathogenesis-related protein8:
 
GRMZM2G456997
Zang, ZY et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00850     Reference: June 16th, 2020
Gene Product: July 25th, 2018
Gene Model: June 16th, 2020
4 months agoprp9 pathogenesis-related protein9:
 
GRMZM2G075283
Shi, FM et al. 2018. Gene 659:100-108     Reference: June 16th, 2020
Gene Product: July 25th, 2018
Gene Model: June 16th, 2020
4 months agobsd2 bundle sheath defective2: bundle sheath chloroplasts disrupted; high chlorophyll fluorescence, seedling lethal
1.05
   Fan, ZY et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1777374     Reference: June 15th, 2020
Gene Product: September 1st, 2003
Variation: October 14th, 2009
4 months agobsd*-pg bundle sheath defective*-pale green: pale green, bundle sheath defective
 
   Fan, ZY et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1777374     Reference: June 15th, 2020
Variation: September 5th, 2015
4 months agosnrkII9 SnRK2 serine threonine protein kinase9:
 
GRMZM2G081915
Zeng, W et al. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-020-03632-x     Reference: June 15th, 2020
Gene Product: April 14th, 2018
Gene Model: April 14th, 2018
4 months agoaldh20 aldehyde dehydrogenase20:
 
GRMZM2G130440
Fan, ZY et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1777374     Reference: June 15th, 2020
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
4 months agoumc1238  :
 
GRMZM2G072550
    Variation: September 1st, 2003
Gene Model: June 14th, 2020
4 months agoppr166 pentatricopeptide repeat protein166: functions in the editing of multiple mitochondrial transcripts; mutants have an empty pericarp phenotype
 
GRMZM2G411786
Liu, R et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa273     Reference: June 13th, 2020
Gene Product: December 27th, 2016
Variation: June 13th, 2020
Gene Model: June 13th, 2020
4 months agopprsmr1 pentatricopeptide repeat smr1: mutants have empty pericarp
2.02
   Wang, H-C et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00814   AT1G79490 (TAIR) Reference: June 12th, 2020
Gene Product: December 27th, 2016
Variation: July 1st, 2019
4 months agoemp6 empty pericarp6: mutant causes early arrest in grain development leading to an empty pericarp phenotype.similar to Arabidopsis ubiquitin thiolesterase
2.07
GRMZM2G048392
Wang, H-C et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00814     Reference: June 12th, 2020
Gene Product: July 4th, 2014
Variation: February 24th, 2017
Gene Model: February 24th, 2017
4 months agomcsf2 mitochondrial CAF-like splicing factor2:
4.04
GRMZM2G129615
Wang, H-C et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00814     Reference: June 12th, 2020
Gene Product: July 23rd, 2009
Gene Model: April 13th, 2020
4 months agohma3 heavy metal ATPase3: associated with leaf Cd concentration under various Cd levels at seedling and maturing stages
 
GRMZM2G175576
Stich, B et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13823     Reference: June 12th, 2020
Gene Product: October 23rd, 2019
Variation: June 12th, 2020
Gene Model: January 27th, 2018
4 months agohma4 heavy metal ATPase4:
 
GRMZM2G455491
Stich, B et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13823     Reference: June 12th, 2020
Gene Product: October 23rd, 2019
Variation: June 12th, 2020
Gene Model: January 27th, 2018
4 months agomo1 molybdate transporter1: candidate for the natural genetic variation of Cd and Mo concentrations and contents in shoots
 
GRMZM2G083156
Stich, B et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13823     Reference: June 12th, 2020
Gene Product: June 12th, 2020
Variation: June 12th, 2020
Gene Model: June 12th, 2020
4 months agoppr14 pentatricopeptide repeat protein14: null mutations severely arrest the embryo and endosperm development, causing an empty pericarp phenotype
 
GRMZM2G106384
Wang, H-C et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00814     Reference: June 12th, 2020
Gene Product: December 27th, 2016
Variation: June 12th, 2020
Gene Model: June 12th, 2020
4 months agoppr237 pentatricopeptide repeat protein237:
 
GRMZM2G110483
Wang, H-C et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00814     Reference: June 12th, 2020
Gene Product: December 27th, 2016
Gene Model: June 12th, 2020
4 months agonad4(mtNB) NADH dehydrogenase subunit 4:
 
GRMZM5G804358
Liu, R et al. 2020. Int J Mol Sci 21:4047     Reference: June 5th, 2020
Gene Product: September 1st, 2003
Gene Model: June 12th, 2020
4 months agoglb2 globulin2: presence-absence
1.11
   Lopez-Castillo, LM et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00781     Reference: June 11th, 2020
Gene Product: September 1st, 2003
Variation: March 30th, 2009
4 months agoamo1 amine oxidase1: single copy rice cDNA rz69
10.04
GRMZM2G359298
Lopez-Castillo, LM et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00781     Reference: June 11th, 2020
Gene Product: September 1st, 2003
Gene Model: September 29th, 2015
4 months agoumc1118  :
1.11
GRMZM2G012224
Lopez-Castillo, LM et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00781     Reference: June 11th, 2020
Variation: September 21st, 2016
Gene Model: October 19th, 2017
4 months agoctb1 chitinase B1: cDNA sequence corresponds to protein sequence of maize chitinase B
10.04
GRMZM2G005633
Lopez-Castillo, LM et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00781     Reference: June 11th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: October 21st, 2018
4 months agoprx35 peroxidase35: responsible for the majority of the peroxidase activity of the kernel
 
GRMZM2G177792
Lopez-Castillo, LM et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00781     Reference: June 11th, 2020
Gene Product: September 18th, 2015
Gene Model: September 18th, 2015
4 months agopao4 polyamine oxidase4: similar to Arabidopsis putative polyamine oxidase 4
10.07
GRMZM2G150248
Jasso-Robles, FI et al. 2016. Plant Physiol Biochem 102:115-124     Reference: June 9th, 2020
Gene Product: June 10th, 2020
Gene Model: January 25th, 2018
4 months agopao6 polyamine oxidase6:
2.00
GRMZM2G078033
Jasso-Robles, FI et al. 2016. Plant Physiol Biochem 102:115-124     Reference: June 9th, 2020
Gene Product: June 10th, 2020
Gene Model: March 7th, 2020
4 months agopao2 polyamine oxidase2:
 
GRMZM2G000052
Jasso-Robles, FI et al. 2016. Plant Physiol Biochem 102:115-124     Reference: June 9th, 2020
Gene Product: June 10th, 2020
Gene Model: February 3rd, 2020
4 months agopao5 polyamine oxidase5:
 
GRMZM2G035994
Pakdel, H et al. 2020. J Biosciences 45:73     Reference: June 9th, 2020
Gene Product: June 10th, 2020
Gene Model: June 9th, 2020
4 months agoIDP689  :
8.05
GRMZM2G141922
    Variation: March 31st, 2005
Gene Model: June 10th, 2020
4 months agocenH3 centromeric histone H3:
6.06
GRMZM2G158526
Jacquier, NMA et al. 2020. Nature Plants pp.doi: 10.1038/s41477-020-0664-9     Reference: June 8th, 2020
Gene Product: December 24th, 2015
Variation: November 7th, 2012
Gene Model: October 24th, 2011
4 months agogdh1 glutamic dehydrogenase1: electrophoretic mobility; null allele is known (cold sensitivity); intra/interlocus hybrid bands occur - merge with GenBank sequences inferred by overgo map location matches
1.11
   Dong, M-Y et al. 2020. Planta 252:doi: 10.1007/s00425-020-03403-4     Reference: June 6th, 2020
Gene Product: September 1st, 2003
Variation: August 7th, 2006
4 months agohsftf22 HSF-transcription factor 22: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to heat stress transcription factor A-1b of A. thaliana
 
   Dong, M-Y et al. 2020. Planta 252:doi: 10.1007/s00425-020-03403-4     Reference: June 6th, 2020
Gene Product: May 15th, 2020
4 months agowrky16 WRKY-transcription factor 16: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.08
GRMZM2G063216
Dong, M-Y et al. 2020. Planta 252:doi: 10.1007/s00425-020-03403-4     Reference: June 6th, 2020
Gene Product: July 24th, 2017
Gene Model: December 6th, 2016
4 months agoprp7 pathogenesis-related protein7:
1.03
GRMZM2G112524
Dong, M-Y et al. 2020. Planta 252:doi: 10.1007/s00425-020-03403-4     Reference: June 6th, 2020
Gene Product: July 25th, 2018
Gene Model: September 30th, 2017
4 months agobrd1 brassinosteroid-deficient dwarf1: Mutant plants have essentially no internode elongation and exhibit no etiolation response when germinated in the dark.
 
GRMZM2G103773
Dong, M-Y et al. 2020. Planta 252:doi: 10.1007/s00425-020-03403-4     Reference: June 6th, 2020
Gene Product: February 18th, 2012
Variation: August 16th, 2019
Gene Model: February 15th, 2012
4 months agopan2 pangloss2: Defines polarization in divisions of subsidiary mother cells at guard cells
 
GRMZM2G034572
Dong, M-Y et al. 2020. Planta 252:doi: 10.1007/s00425-020-03403-4     Reference: June 6th, 2020
Gene Product: November 27th, 2012
Variation: November 27th, 2012
Gene Model: November 27th, 2012
4 months agocry3 cryptochrome3: a homolog of CRY2, encoding cryptochrome-2, a photoreceptor regulated by blue light and involved in floral initiation (Li et al., 2018)
 
GRMZM2G172152
Dong, M-Y et al. 2020. Planta 252:doi: 10.1007/s00425-020-03403-4     Reference: June 6th, 2020
Gene Product: August 31st, 2018
Gene Model: August 31st, 2018
4 months agolrl3 ljrhl1-like3:
5.08
GRMZM5G832135
Dong, M-Y et al. 2020. Planta 252:doi: 10.1007/s00425-020-03403-4   AT5G58010 (TAIR) Reference: June 6th, 2020
Gene Product: September 14th, 2016
Gene Model: December 17th, 2018
4 months agoIDP144  :
8.03
GRMZM2G154278
    Variation: March 31st, 2005
Gene Model: June 6th, 2020
4 months agoIDP88  :
8.03
GRMZM2G074103
    Variation: March 31st, 2005
Gene Model: June 6th, 2020
4 months agopor2 porin2: cDNA similar to plant tonoplast aquaporins; SSR umc1061
10.06
GRMZM2G125023
Moisseyev, G et al. 2020. Database (Oxford) 2020:baaa038     Reference: June 5th, 2020
Gene Product: September 1st, 2003
Variation: January 29th, 2011
Gene Model: February 5th, 2015
4 months agotip2a tonoplast intrinsic protein2:
4.06
GRMZM2G027098
Moisseyev, G et al. 2020. Database (Oxford) 2020:baaa038     Reference: June 5th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: February 5th, 2015
4 months agotip5 tonoplast intrinsic protein5: cDNA sequence similar to tonoplast aquaporin; SSR umc2122
10.06
GRMZM2G125023
Moisseyev, G et al. 2020. Database (Oxford) 2020:baaa038     Reference: June 5th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: February 5th, 2015
4 months agoppr18 pentatricopeptide repeat protein18: mutants impair the splicing of nad4 intron 1
 
GRMZM2G438456
Liu, R et al. 2020. Int J Mol Sci 21:4047     Reference: June 5th, 2020
Gene Product: December 27th, 2016
Variation: June 5th, 2020
Gene Model: June 5th, 2020
4 months agoarr1 ARR-B-transcription factor 1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, BB, et al. 2020. Nature Genetics. 0:doi: 10.1038/s41588-020-0616-3     Reference: June 4th, 2020
Gene Product: June 30th, 2017
4 months agosbp18 SBP-transcription factor 18: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, BB, et al. 2020. Nature Genetics. 0:doi: 10.1038/s41588-020-0616-3     Reference: June 4th, 2020
Gene Product: July 5th, 2019
4 months agopip1a plasma membrane intrinsic protein1:
2.03
GRMZM2G174807
Ding, L, et al. 2020. Plant Physiol. 0:doi; 10.1104/pp.19.01183     Reference: June 4th, 2020
Gene Product: September 1st, 2003
Variation: June 6th, 2005
Gene Model: October 29th, 2014
4 months agopip1b plasma membrane intrinsic protein1:
5.06
   Ding, L, et al. 2020. Plant Physiol. 0:doi; 10.1104/pp.19.01183     Reference: June 4th, 2020
Gene Product: September 1st, 2003
Variation: April 26th, 2016
4 months agopip2a plasma membrane intrinsic protein2:
2.03
   Ding, L, et al. 2020. Plant Physiol. 0:doi; 10.1104/pp.19.01183     Reference: June 4th, 2020
Gene Product: September 1st, 2003
Variation: January 25th, 2020
4 months agopip1d plasma membrane intrinsic protein1: differs in nucleotide sequence from pip1c but encodes the same protein.
4.06
GRMZM2G392975
Ding, L, et al. 2020. Plant Physiol. 0:doi; 10.1104/pp.19.01183     Reference: June 4th, 2020
Gene Product: September 1st, 2003
Variation: October 29th, 2014
Gene Model: October 29th, 2014
4 months agopip1e plasma membrane intrinsic protein1:
4.06
   Ding, L, et al. 2020. Plant Physiol. 0:doi; 10.1104/pp.19.01183     Reference: June 4th, 2020
Gene Product: September 1st, 2003
Variation: October 24th, 2014
4 months agopip1f plasma membrane intrinsic protein1:
9.01
GRMZM2G136032
Ding, L, et al. 2020. Plant Physiol. 0:doi; 10.1104/pp.19.01183     Reference: June 4th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: January 25th, 2020
4 months agopip2e plasma membrane intrinsic protein2:
7.02
   Ding, L, et al. 2020. Plant Physiol. 0:doi; 10.1104/pp.19.01183     Reference: June 4th, 2020
Gene Product: September 1st, 2003
Variation: June 6th, 2005
4 months agopip2b plasma membrane intrinsic protein2:
2.06
   Ding, L, et al. 2020. Plant Physiol. 0:doi; 10.1104/pp.19.01183     Reference: June 4th, 2020
Gene Product: September 1st, 2003
Variation: March 19th, 2013
4 months agopip2c plasma membrane intrinsic protein2:
4.06
   Ding, L, et al. 2020. Plant Physiol. 0:doi; 10.1104/pp.19.01183     Reference: June 4th, 2020
Gene Product: September 1st, 2003
Variation: March 25th, 2013
4 months agopip2d plasma membrane intrinsic protein2: member of the aquaporin family
5.05
   Ding, L, et al. 2020. Plant Physiol. 0:doi; 10.1104/pp.19.01183     Reference: June 4th, 2020
Gene Product: September 1st, 2003
Variation: March 7th, 2007
4 months agopip2f plasma membrane intrinsic protein2:
7.02
   Ding, L, et al. 2020. Plant Physiol. 0:doi; 10.1104/pp.19.01183     Reference: June 4th, 2020
Gene Product: September 1st, 2003
Variation: March 26th, 2013
4 months agome8 NAD-dependent malic enzyme8: White and red light decreased the quantity of mRNA, while far-red light led to the increase of its transcripts
 
GRMZM2G085747
Eprintsev, AT et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153193     Reference: June 4th, 2020
Gene Product: June 4th, 2020
Gene Model: June 4th, 2020
4 months agome9 NAD-dependent malic enzyme9: White and red light increased the quantity of mRNA, while far-red light led to the decrease of its transcripts
7.03
GRMZM2G406672
Eprintsev, AT et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153193     Reference: June 4th, 2020
Gene Product: June 4th, 2020
Gene Model: June 4th, 2020
4 months agonad5 (mito) NADH dehydrogenase subunit 5:
 
   Yang, H-H et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00732     Reference: June 3rd, 2020
Gene Product: September 1st, 2003
4 months agoppr101 pentatricopeptide repeat potein101: Loss-of-function mutation impairs seed development
 
GRMZM2G023999
Yang, H-H et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00732     Reference: June 3rd, 2020
Gene Product: December 27th, 2016
Variation: June 3rd, 2020
Gene Model: June 3rd, 2020
4 months agoppr231 pentatricopeptide repeat potein231: Loss-of-function mutation impairs seed development
 
GRMZM2G018757
Yang, H-H et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00732     Reference: June 3rd, 2020
Gene Product: December 27th, 2016
Variation: June 3rd, 2020
Gene Model: June 3rd, 2020
4 months agondhB-II (cp) nicotinamide adenine dinucleotide dehydrogenaseB2: ndhB-II 9(cp) is a duplication of ndhB-I (cp); see ndhB-I (cp) entry for complete information
 
GRMZM5G810298
Huang, J et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00374     Reference: June 2nd, 2020
Gene Product: September 1st, 2003
Gene Model: June 2nd, 2020
4 months agondhB-I (cp) nicotinamide adenine dinucleotide dehydrogenaseB1: Maier et al, 1992, contains an analysis of RNA editing sites as regarding a "consensus" recognition site for editing across organisms and genomes.
 
GRMZM5G876106
Huang, J et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00374     Reference: June 2nd, 2020
Gene Product: September 1st, 2003
Gene Model: June 2nd, 2020
4 months agokw9 kernel weight9: Involved in kernel weight variation
 
GRMZM2G171994
Huang, J et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00374     Reference: June 2nd, 2020
Gene Product: December 27th, 2016
Gene Model: June 2nd, 2020
4 months agoms23 male sterile23: pollen mother cells degeneratedominant Rf4 restores fertility to cms-C; complementary with Rf5 and Rf6
8.01 - 8.02
GRMZM2G021276
Zheng, MM et al. 2020. G3 pp.doi: 10.1534/g3.120.401192     Reference: June 1st, 2020
Gene Product: September 14th, 2016
Variation: September 6th, 2019
Gene Model: December 4th, 2016
4 months agosbei1 starch branching enzyme IIb interacting protein1: knocking out this and sbei2 genes using the CRISPR/Cas9 system could effectively increase the apparent amylose content but maintain the maize kernel weight.
 
GRMZM2G089553
Chen, C et al. 2020. Can J Plant Sci pp.doi: 10.1139/CJPS-2019-0219     Reference: June 1st, 2020
Gene Product: June 1st, 2020
Gene Model: June 1st, 2020
4 months agosbei2 starch branching enzyme IIb interacting protein2: knocking out this and sbei1 genes using the CRISPR/Cas9 system could effectively increase the apparent amylose content but maintain the maize kernel weight.
 
GRMZM2G091494
Chen, C et al. 2020. Can J Plant Sci pp.doi: 10.1139/CJPS-2019-0219     Reference: June 1st, 2020
Gene Product: June 1st, 2020
Gene Model: June 1st, 2020
4 months agophd5 PHD-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.10
GRMZM2G057265
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 8th, 2017
Variation: September 25th, 2007
Gene Model: May 30th, 2020
4 months agoAY104784  :
4.08
GRMZM2G179737
    Variation: March 2nd, 2007
Gene Model: May 29th, 2020
4 months agoAY107128  :
4.05
GRMZM2G145951
    Variation: September 25th, 2007
Gene Model: May 29th, 2020
5 months agoIDP217  :
5.09
GRMZM2G143627
    Variation: March 31st, 2005
Gene Model: May 26th, 2020
5 months agodek55 defective kernel55: Enclodes a Mitochondrial E-subgroup PPR Protein
 
AC201815.4_FG001
Ren, RC et al. 2020. BMC Plant Biology pp.doi: 10.21203/rs.3.rs-26875/v1     Reference: May 25th, 2020
Gene Product: December 27th, 2016
Variation: May 25th, 2020
Gene Model: May 25th, 2020
5 months agoumc1375  :
5.07
GRMZM2G118366
    Variation: September 1st, 2003
Gene Model: May 24th, 2020
5 months agocl17982_1a  :
5.06
GRMZM5G832989
    Variation: September 25th, 2007
Gene Model: May 24th, 2020
5 months agoIDP3821  :
5.06
GRMZM2G385999
    Variation: March 31st, 2005
Gene Model: May 24th, 2020
5 months agoumc1028  :
2.05
GRMZM2G115658
Trevisan, S et al. 2020. Plant Growth Regulation pp.doi: 10.1007/s10725-020-00626-z     Reference: May 23rd, 2020
Variation: September 1st, 2003
Gene Model: February 15th, 2018
5 months agocol5 C2C2-CO-like-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G075562
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
Gene Model: May 23rd, 2020
5 months agoembp1 EM binding protein1 homologue: bZIP protein binds to O2 box; wheat EM orthologue
7.02
GRMZM2G095078
Perveen, S et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa248     Reference: May 23rd, 2020
Gene Product: August 21st, 2018
Variation: September 5th, 2018
Gene Model: September 5th, 2018
5 months agoga2ox12 gibberellin 2-oxidase12:
 
GRMZM2G177104
Trevisan, S et al. 2020. Plant Growth Regulation pp.doi: 10.1007/s10725-020-00626-z     Reference: May 23rd, 2020
Gene Product: October 27th, 2014
Gene Model: October 30th, 2014
5 months agopco087990  :
5.06
GRMZM2G108087
    Variation: September 25th, 2007
Gene Model: May 23rd, 2020
5 months agoIDP737  :
5.07
GRMZM2G339943
    Variation: March 31st, 2005
Gene Model: May 23rd, 2020
5 months agoIDP89  :
5.06
GRMZM2G029029
    Variation: March 31st, 2005
Gene Model: May 23rd, 2020
5 months agoaasr1 abscisic acid stress ripening1: protects the major ARS protein in maize; protects kernel yield under water deficit; SSR pio059, IDP9044
10.02
GRMZM2G136910
Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: January 2nd, 2019
Variation: December 30th, 2011
Gene Model: November 1st, 2011
5 months agofbn1 fibrillin1: leaf cDNA csu653, moderate copy number, similar to plastid protein
1.05
GRMZM2G003318
Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: July 27th, 2016
5 months agomdh1 malate dehydrogenase1: electrophoretic mobility; null allele is known; mitochondrial; dimeric; intra/interlocus hybrid bands occur
8.03
   Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
5 months agomdh2 malate dehydrogenase2: electrophoretic mobility; null allele is known; mitochondrial; dimeric; intra/interlocus hybrid bands occur
6.07
   Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
5 months agomdh4 malate dehydrogenase4: electrophoretic mobility; null allele is known; cytosolic; dimeric; intra/interlocus hybrid bands occur; probed by csu77
1.08
   Chen, YQ et al. 2020. Plant Biotechnol J pp.doi: 10.1111/pbi.13416     Reference: May 21st, 2020
Gene Product: September 1st, 2003
Variation: May 22nd, 2020
5 months agoumc1995  :
10.04
GRMZM2G343291
Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Variation: September 1st, 2003
Gene Model: December 15th, 2017
5 months agobgaf1 beta glucosidase aggregating factor1:
7.02
GRMZM2G172204
Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: September 1st, 2003
Variation: October 23rd, 2013
Gene Model: October 24th, 2011
5 months agogst41 glutathione transferase41:
6.05
GRMZM2G097989
Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2010
Gene Model: July 27th, 2016
5 months agopsbD (cp)  :
 
   Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: September 1st, 2003
5 months agonad1 NADH ubiquinone oxidoreductase1: endosperm cDNA 5C05D10 (uaz266), similar to a NADH-ubiquinone oxidoreductase subunit
1.03
GRMZM2G018941
Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: March 4th, 2016
5 months agomstr1 monosaccharide transporter1:
7.00
GRMZM2G135739
Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Variation: July 14th, 2008
Gene Model: September 17th, 2015
5 months agoimd2 isopropylmalate dehydrogenase2:
 
GRMZM5G803490
Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: September 1st, 2003
Variation: July 22nd, 2014
Gene Model: July 22nd, 2014
5 months agopld5 phospholipase D5:
 
GRMZM2G442551
Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: August 9th, 2016
Gene Model: August 9th, 2016
5 months agoIDP2361  :
5.05
GRMZM2G112352
    Variation: March 31st, 2005
Gene Model: May 22nd, 2020
5 months agoIDP758  :
5.05
GRMZM2G061938
    Variation: March 31st, 2005
Gene Model: May 22nd, 2020
5 months agopco093974b  :
5.03
GRMZM2G053236
Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: June 3rd, 2014
Gene Model: May 9th, 2013
5 months agopsei3 cystatin3:
6.06
GRMZM2G440968
Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: April 21st, 2008
Variation: February 24th, 2009
Gene Model: July 28th, 2016
5 months agoms20 male sterile20: mutants are male sterile and exhibit a glossy outer anther surface, abnormal Ubish bodies, and defective pollen exinedegeneration obvious by mid-vacuolated microspore stage
1.00 - 1.05
GRMZM2G434500
Wan, XY et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.05.009   AT1G12570 (TAIR) Reference: May 21st, 2020
Gene Product: November 16th, 2016
Variation: March 20th, 2019
Gene Model: November 16th, 2016
5 months agobm3 brown midrib3: like bm1; has lowered activity of caffeic acid O-methyl transferase; application: modified lignin has improved digestibility in ruminants; silage corn with bm3 is in production. However, bm3 results in weaker stalks, reduced stover and grain yield, and in some cases reduced maturity; these effects appear genotype-specific
4.04
GRMZM5G814904
Wu, ZY et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery208     Reference: June 4th, 2018
Gene Product: February 16th, 2011
Variation: October 27th, 2015
Gene Model: May 21st, 2020
5 months agomdh3 malate dehydrogenase3: electrophoretic mobility; null allele is known; mitochondrial; dimeric; intra/interlocus hybrid bands occur
3.08
GRMZM2G466833
Chen, YQ et al. 2020. Plant Biotechnol J pp.doi: 10.1111/pbi.13416     Reference: May 21st, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 30th, 2015
5 months agomdh5 malate dehydrogenase5: electrophoretic mobility, null allele is known; cytosolic; dimeric, intra/interlocus hybrid bands occur; cDNA csu249 single copy
5.03
   Chen, YQ et al. 2020. Plant Biotechnol J pp.doi: 10.1111/pbi.13416     Reference: May 21st, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
5 months agoms44 male sterile44: dominant Ms44 plants male sterile
4.08
AC225127.3_FG003
Wan, XY et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.05.009     Reference: May 21st, 2020
Gene Product: September 1st, 2003
Variation: January 6th, 2017
Gene Model: January 6th, 2017
5 months agots5 tassel seed5: dominant Ts5 tassels are upright with scattered, short silks; branches mostly pistillate toward the base
4.03 - 4.05
GRMZM2G177668
Wan, XY et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.05.009     Reference: May 21st, 2020
Gene Product: March 25th, 2019
Variation: March 25th, 2019
Gene Model: March 25th, 2019
5 months agoms30 male sterile30: like ms1
4.08
GRMZM2G174782
Wan, XY et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.05.009     Reference: May 21st, 2020
Gene Product: January 25th, 2019
Variation: January 25th, 2019
Gene Model: January 25th, 2019
5 months agokcs3 3-ketoacyl-CoA synthase3:
 
GRMZM2G075140
Wan, XY et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.05.009     Reference: May 21st, 2020
Gene Product: November 1st, 2018
Gene Model: February 13th, 2020
5 months agoIDP290  :
5.05
GRMZM2G398500
    Variation: March 31st, 2005
Gene Model: May 21st, 2020
5 months agoIDP335  :
5.05
GRMZM2G171406
    Variation: March 31st, 2005
Gene Model: May 21st, 2020
5 months agogte102 global transcription factor group E:
5.05
GRMZM2G006707
    Variation: September 1st, 2003
Gene Model: May 20th, 2020
5 months agotil2 temperature-induced lipocalin2:
1.07
GRMZM2G124307
Charron, J-BF et al. 2005. Plant Physiol 139:2017-2028     Reference: May 20th, 2020
Gene Product: May 20th, 2020
Gene Model: February 12th, 2020
5 months agopht1 phosphate transporter protein1:
5.03
GRMZM2G326707
Wang, F et al. 2020. Plant Biotechnol J pp.doi: 10.1111/pbi.13414     Reference: May 20th, 2020
Gene Product: June 16th, 2016
Variation: February 4th, 2011
Gene Model: May 27th, 2015
5 months agopht3 phosphate transporter protein3: similar to Arabidosis inorganic phosphate transporter 1-4
 
GRMZM2G045473
Wang, F et al. 2020. Plant Biotechnol J pp.doi: 10.1111/pbi.13414     Reference: May 20th, 2020
Gene Product: June 16th, 2016
Variation: December 28th, 2010
Gene Model: May 27th, 2015
5 months agopht4 phosphate transporter protein4:
10.04
GRMZM2G159075
Wang, F et al. 2020. Plant Biotechnol J pp.doi: 10.1111/pbi.13414     Reference: May 20th, 2020
Gene Product: June 16th, 2016
Variation: July 14th, 2008
Gene Model: May 27th, 2015
5 months agoeil3 ethylene insensitive-like3:
1.04
GRMZM2G033570
Yang, Z et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13803     Reference: May 20th, 2020
Variation: August 6th, 2008
Gene Model: August 29th, 2013
5 months agopht10 phosphate transporter protein10:
 
GRMZM2G075870
Wang, F et al. 2020. Plant Biotechnol J pp.doi: 10.1111/pbi.13414     Reference: May 20th, 2020
Gene Product: June 16th, 2016
Gene Model: June 16th, 2016
5 months agogll1 glossy2-like1: strong homology to maize gl2 and Arabidopsis cer2.
 
GRMZM2G315767
Alexander, LE et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00241   AT4G13840 (TAIR) Reference: May 20th, 2020
Gene Product: February 28th, 2020
Gene Model: February 28th, 2020
5 months agoIDP2140  :
5.05
GRMZM2G128902
    Variation: March 31st, 2005
Gene Model: May 20th, 2020
5 months agotil1 temperature-induced lipocalin1:
5.05
GRMZM2G072034
Charron, J-BF et al. 2005. Plant Physiol 139:2017-2028     Reference: May 20th, 2020
Gene Product: May 20th, 2020
Gene Model: May 20th, 2020
5 months agoumc1687  :
5.05
GRMZM2G029922
    Variation: September 1st, 2003
Gene Model: May 19th, 2020
5 months agopht5 phosphate transporter protein5:
 
GRMZM2G041595
Li, WD et al. 2020. Planta 251:106     Reference: May 19th, 2020
Gene Product: June 16th, 2016
Gene Model: September 13th, 2018
5 months agoIDP333  :
5.05
GRMZM2G056988
    Variation: March 31st, 2005
Gene Model: May 19th, 2020
5 months agocct1 CO CO-LIKE TIMING OF CAB1 protein domain1: photoperiod response locus; confers later flowering in teosintes under longer day lengths; many maize inbred lines, including some adapted to tropical regions, have cct1 alleles insensitive to photoperiod (Hung et al 2012)
 
GRMZM2G381691
Cui, ZH et al. 2020. Sci. Rep. 10:8165   AT5G24930 (TAIR)
LOC_Os07g15770 (MSU/TIGR)
Os07g0261200 (Gramene)
Reference: May 18th, 2020
Gene Product: June 18th, 2018
Variation: December 27th, 2017
Gene Model: July 17th, 2012
5 months agoAY105205  :
5.04
GRMZM2G135691
    Variation: September 25th, 2007
Gene Model: May 18th, 2020
5 months agoIDP1623  :
5.04
GRMZM2G167356
    Variation: March 31st, 2005
Gene Model: May 16th, 2020
5 months agoIDP207  :
5.04
GRMZM2G109315
    Variation: March 31st, 2005
Gene Model: May 16th, 2020
5 months agoIDP359  :
5.04
GRMZM2G060167
    Variation: March 31st, 2005
Gene Model: May 16th, 2020
5 months agors1 rough sheath1: shoot meristem and developing stem specific; dominant Rs1 plants have extreme ligule disorganization (aka kn2)
7.00
GRMZM2G028041
Chen, QY et al. 2020. PLoS Genetics 16:e1008791     Reference: May 15th, 2020
Gene Product: September 30th, 2015
Variation: November 18th, 2013
Gene Model: September 30th, 2015
5 months agors2 rough sheath2: short, zigzag plants with warty, distorted sheaths and leaves
1.05
   Chen, QY et al. 2020. PLoS Genetics 16:e1008791     Reference: May 15th, 2020
Gene Product: September 1st, 2003
Variation: May 9th, 2009
5 months agohstf2 heat shock transcription factor2: pollen cDNA similar to eucaryotic heat shock factor
8.09
GRMZM2G118453
Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
Variation: December 23rd, 2012
Gene Model: July 28th, 2016
5 months agohstf1 heat shock transcription factor1: embryo cDNA similar to eucaryotic heat shock factor; multiple copies; gene-specific primers
 
   Gagliardi, D et al. 1995. Plant Mol Biol 29:841-856     Reference: September 1st, 2003
Gene Product: May 15th, 2020
5 months agohstf3 heat shock transcription factor 3: pollen cDNA similar to eucaryotic heat shock factor
 
   Gagliardi, D et al. 1995. Plant Mol Biol 29:841-856     Reference: September 1st, 2003
Gene Product: May 15th, 2020
5 months agoumc1283  :
5.04
GRMZM2G094353
    Variation: September 1st, 2003
Gene Model: May 15th, 2020
5 months agohsftf1 HSF-transcription factor 1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
5 months agohsftf10 HSF-transcription factor 10: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
5 months agohsftf12 HSF-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
5 months agohsftf14 HSF-transcription factor 14: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to heat stress transcription factor A-2 of A. thaliana
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
5 months agohsftf15 HSF-transcription factor 15: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.