Newly Characterized Genes

CHECK HERE FOR DESCRIPTIONS OF NEWLY CHARACTERIZED MAIZE GENES!

With the overwhelming number of genes that are being discovered by phenotypic and sequence analyses, the MaizeGDB staff is missing some that should be included in MaizeGDB. We need your help! Please let us know about new genes that you're working on or have recently read about.

MaizeGDB prefers not to assign formal gene names to gene models based purely on orthology. Known difficulties include inclusivity (there are over 10,000 functionally characterized Arabidopsis genes)* and some likelihood of errors in inferred functions. Unlike gene models, gene names are generally conserved unless differently named genes are found to be allelic. Of particular note, naming priveleges are customarily held by researchers who first confirm function.

We encourage researchers to use the annotation tool on the MaizeGDB gene model pages to add their insights about putative function, especially when not currently part of the Phytozome or Gramene pipelines.

Below is a list of newly reported or newly characterized genes (new reference, new gene product, and/or new variation) with which you may not yet be familiar. The genes are sorted by the last time the gene has been updated. To suggest genes for inclusion in this list, email us and include the gene name, full name, chromosome or bin, and a recent reference.

If you cannot find the gene you would like to recommend in the database, send us an email so that we can add it to the database!

This page is based on our monthly release. The updates are made around 4:00am CST.


         Recommended Genes


One month | Six months | One year | All time

New or updated genes since one month ago. The cutoff date is September 17th, 2018.

Last UpdateGeneFull Name : DescriptionChromosome
or Bin
Gene
Model
Recent ReferenceOrthologsUpdate information
2 days agobnlg1129  :
9.08
GRMZM2G168760
    Variation: September 1st, 2003
Gene Model: October 15th, 2018
2 days agoxyl1 xylanase1: encoded by one or few genes.
9.06
GRMZM5G850567
Suen, D; Huang, A. 2007. J Biol Chem 282:625-636     Reference: March 4th, 2009
Gene Product: September 1st, 2003
Variation: June 29th, 2005
Gene Model: October 15th, 2018
2 days agoras18B1 ras related protein11B1:
 
AC149818.2_FG001
    Variation: January 25th, 2011
Gene Model: October 15th, 2018
2 days agoxyl2 xylanase2:
 
GRMZM2G170839
Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: September 1st, 2003
Gene Model: October 15th, 2018
3 days agoabi43 ABI3-VP1-transcription factor 43: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
9.07
GRMZM2G028794
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: October 14th, 2018
3 days agoumc1060  : similar to Arabidopsis RHO guanyl-nucleotide exchange factor 11
5.04
GRMZM2G346133
    Variation: September 1st, 2003
Gene Model: October 14th, 2018
4 days agoglk34 G2-like-transcription factor 34: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
9.03
GRMZM2G081671
Xu, YJ et al. 2018. Plant Cell Rep pp.doi: 10.1007/s00299-018-2262-0     Reference: February 2nd, 2018
Variation: September 1st, 2003
Gene Model: October 13th, 2018
4 days agooec2 oxygen evolving complex2:
2.03
GRMZM2G021617
Ettinger, WF; Theg, SM. 1992. Plant Physiol 99:791-793     Reference: July 18th, 2012
Variation: February 6th, 2015
Gene Model: October 13th, 2018
4 days agoras11D1 ras-related protein11D1: similar to Arabidopsis RAB GTPase homolog A1D
9.03
GRMZM2G018619
Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141     Reference: January 12th, 2011
Variation: October 13th, 2018
Gene Model: October 13th, 2018
4 days agobnl5.04  :
9.03
GRMZM2G306915
Armstrong, CL et al. 1992. Theor Appl Genet 84:755-762     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: October 13th, 2018
5 days agodhn2 dehydrin2: polymorphic protein in embryos of some inbredssimilar to Arabidopsis dehydrin Rab18
9.03
GRMZM2G098750
Asghar, R; Fenton, RD; DeMason, DA; Close, TJ. 1994. Protoplasma 177:87-94     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Gene Model: October 12th, 2018
5 days agohsk1 high-sulfur keratin homolog1: endosperm cDNA 5C04B04 (uaz144), similar to high-sulfur keratin; relation to uaz144a (bin 4.06) and uaz144b (bin 5.06) unclear
9.03
GRMZM5G844723
Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: October 12th, 2018
6 days agobnlg2122  :
9.01
GRMZM2G124276
    Variation: October 11th, 2018
Gene Model: October 11th, 2018
6 days agocptk1 chloroplast thymidine kinase1: Mutants have aberrant chloroplast DNA metabolism. Alice Barkan, 2011
 
GRMZM2G048821
Le Ret, M et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.18.00976     Reference: October 11th, 2018
Variation: October 11th, 2018
Gene Model: September 6th, 2011
7 days agobz1 bronze1: modifies purple aleurone and plant color to pale or reddish brown; anthers yellow-fluorescent; allele bz1-m4 = sh1-bz1-m4; SSR phi017NCBI: UDPG-flavonoid 3-oxy glucosyl transferase
9.02
   Li, Y-J et al. 2018. Ann Bot pp.doi: 10.1093/aob/mcy123     Reference: July 4th, 2018
Gene Product: July 4th, 2018
Variation: October 10th, 2018
7 days agonut1 necrotic upper tips1: Ac-tagged mutation, necrotic upper leaf tips and blasted tassel.
 
GRMZM2G041668
Dong, Zhaobin; et al. 2016. Maize Genetics Conference Abstracts. 58:P191   AT1G12260 (TAIR)
LOC_Os06g01480 (MSU/TIGR)
Reference: June 22nd, 2016
Gene Product: September 22nd, 2015
Variation: October 10th, 2018
Gene Model: November 15th, 2017
7 days agohnh1 HNH endonuclease domain-containing protein1: involved in degrading linear and circular DNA and participates in mitochondrial DNA regulation during pollen development
 
GRMZM2G074804
Ma, F et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.18.00754   AT1G18680 (TAIR) Reference: October 10th, 2018
Gene Product: October 10th, 2018
Gene Model: October 10th, 2018
7 days agostk1 serine threonine kinase1: mutants have reduced pollen transmission
9.02
   Fan, MX et al. 2018. Plant Biotechnol J pp.doi: 10.1111/pbi.12880     Reference: January 13th, 2018
Gene Product: May 13th, 2014
Variation: October 10th, 2018
8 days agocol11 C2C2-CO-like-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also
2.04
GRMZM2G095598
Song, NN et al. 2018. Gene pp.doi: 10.1016/j.gene.2018.06.032     Reference: June 16th, 2018
Gene Product: June 18th, 2018
Variation: October 9th, 2018
Gene Model: June 18th, 2018
11 days agofl3 floury3: endosperm opaque, soft; dosage effect
8.03
GRMZM2G006585
Wang, JC et al. 2018. BMC Plant Biology pp.doi; 10.1186/s12870-018-1443-x     Reference: October 6th, 2018
Gene Product: September 7th, 2017
Variation: September 7th, 2017
Gene Model: September 7th, 2017
11 days agoplatz5 PLATZ-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.02
GRMZM2G131280
Wang, JC et al. 2018. BMC Plant Biology pp.doi; 10.1186/s12870-018-1443-x     Reference: October 6th, 2018
Variation: February 16th, 2018
Gene Model: February 16th, 2018
11 days agowrky111 WRKY-transcription factor 111: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, C-T et al. 2018. Int J Mol Sci 19:3046     Reference: October 6th, 2018
Gene Product: July 24th, 2017
Variation: July 24th, 2017
12 days agorap2 rap2.7 orthologue: negative regulator of flowering time; vgt1 acts as an enhancer (Salvi et al. 2007)
8.06
GRMZM2G700665
Liang, YM et al. 2018. New Phytol pp.doi: 10.1111/nph.15512     Reference: October 5th, 2018
Gene Product: February 27th, 2017
Gene Model: November 20th, 2012
12 days agopebp8 phosphatidylethanolamine-binding protein8: florigen activity: complements Arabidopsis FT mutants, promoting flowering at short days. Requires functional id1 gene.(Lazakis et al 2011)
 
GRMZM2G179264
Liang, YM et al. 2018. New Phytol pp.doi: 10.1111/nph.15512     Reference: October 5th, 2018
Gene Product: May 6th, 2011
Variation: June 19th, 2015
Gene Model: May 6th, 2011
12 days agofbr1 few-branched1: dominant Fbr1 plants have tassel reduced to 0-3 branches; bract replaces next-to-bottom branch
 
   Dari, S et al. 2018. Maydica 63     Reference: October 5th, 2018
Variation: September 1st, 2003
12 days agomads69 MADS-transcription factor 69: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.contributes to natural variation in flowering time in maize
 
   Liang, YM et al. 2018. New Phytol pp.doi: 10.1111/nph.15512     Reference: October 5th, 2018
Variation: October 5th, 2018
15 days agowrky70 WRKY-transcription factor 70: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.02
GRMZM2G024898
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: October 2nd, 2018
15 days agoraf1 Rubisco Assembly Factor 1: Rubisco Accumulation Factor1; promotes Rubisco assembly. (A. Barkan, 2015)Encodes a previously unstudied protein that is conserved in the green lineage and localizes to bundle sheath chloroplasts
 
GRMZM2G457621
Salesse-Smith, CE et al. 2018. Nature Plants 4:802-810     Reference: October 2nd, 2018
Gene Product: October 4th, 2014
Variation: October 4th, 2014
Gene Model: October 4th, 2014
15 days agomrpa5 multidrug resistance-associated protein5:
 
GRMZM2G084181
Goodman, CD; Casati, P; Walbot, V. 2004. Plant Cell. 16:1812-1826     Reference: October 31st, 2009
Variation: May 14th, 2011
Gene Model: October 2nd, 2018
15 days agoraf2 rubisco accumulation factor2: Rubisco Accumulation Factor2; promotes Rubisco assembly. (A. Barkan, 2015)mutant is seedling-lethal, Rubisco-deficient
 
GRMZM2G139123
Salesse-Smith, CE et al. 2018. Nature Plants 4:802-810     Reference: October 2nd, 2018
Gene Product: December 16th, 2015
Variation: October 4th, 2014
Gene Model: October 4th, 2014
16 days agoaat1 anthocyanin acyltransferase1: mutants exhibit reduced anthocyanin acylation
 
GRMZM2G387394
Paulsmeyer, MN et al. 2018. G3 pp.doi: 10.1534/g3.118.200630     Reference: September 28th, 2018
Gene Product: September 28th, 2018
Variation: October 1st, 2018
Gene Model: September 28th, 2018
17 days agonactf82 NAC-transcription factor 82: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhu, YH et al. 2018. Mol Breed 38:125     Reference: September 30th, 2018
Gene Product: September 22nd, 2015
Variation: September 30th, 2018
17 days agoms39 male sterile39: mutant is male sterile and also exhibits a shorter plant height and tassel length and decreased tassel branch number
 
GRMZM5G804976
Zhu, YH et al. 2018. Mol Breed 38:125     Reference: September 30th, 2018
Gene Product: September 5th, 2012
Variation: September 29th, 2018
Gene Model: September 28th, 2018
19 days agoo2 opaque endosperm2: like o1; high lysine content; regulates b-32 protein (see rip1); reduced lysine degradation (lysine-ketoglutaric reductase); SSRs phi057, 112
7.01
   Zhan, JP et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00392     Reference: September 28th, 2018
Gene Product: September 1st, 2003
Variation: June 6th, 2016
19 days agonkd2 naked endosperm2: double mutants have multiple (2-5) layers of peripheral endosperm cells that lack starch granules or other features of starchy endosperm
10.06
GRMZM5G884137
Zhan, JP et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00392     Reference: September 28th, 2018
Gene Product: January 3rd, 2015
Variation: December 21st, 2017
Gene Model: December 21st, 2017
19 days agonkd1 naked endosperm1: double mutants have multiple (2-5) layers of peripheral endosperm cells that lack starch granules or other features of starchy endosperm
 
GRMZM2G129261
Zhan, JP et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00392     Reference: September 28th, 2018
Gene Product: January 3rd, 2015
Variation: January 3rd, 2015
Gene Model: January 2nd, 2015
21 days agoms9 male sterile9: breakdown of pollen mother cellsLocus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.03
GRMZM2G006981
Albertsen, MC et al. 2014. pp.14/773465     Reference: September 26th, 2018
Gene Product: September 1st, 2003
Variation: July 18th, 2015
Gene Model: July 16th, 2015
22 days agodba2 DNA binding activity2: cDNA pAS12 has binding activity; gene specific
 
GRMZM2G070360
Davis, G et al. 1996. Maize Genetics Conference Abstracts 38     Reference: September 1st, 2003
Variation: September 25th, 2018
Gene Model: September 25th, 2018
23 days agobt2 brittle endosperm2: like bt1; endosperm ADPG pyrophosphorylase subunit; with sh2 complements E. coli glgC
4.05
   Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422     Reference: September 24th, 2018
Gene Product: November 4th, 2014
Variation: November 12th, 2013
23 days agosh2 shrunken2: inflated, transparent, sweet kernels collapse on drying, becoming angular and brittle; endosperm ADPG pyrophosphorylase subunit (compare bt2); application: "supersweet" sweet corn - kernels sugar-sweet for long period
3.09
   Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422     Reference: September 24th, 2018
Gene Product: November 4th, 2014
Variation: October 10th, 2014
23 days agosk1 silkless ears1: pistils abort, no silks
2.03 - 2.04
GRMZM2G021786
Zhao, Y et al. 2018. Frontiers Plant Sci pp.doi: 10.3389/fpls.2018.01227   AT3G22250 (TAIR)
LOC_Os04g44354 (MSU/TIGR)
Reference: August 21st, 2018
Gene Product: September 24th, 2018
Variation: August 21st, 2018
Gene Model: October 31st, 2016
23 days agosm1 salmon silks1: silks salmon color with P1-rr and P1-wr, brown with P1-ww
6.05 - 6.05
GRMZM2G031311
Li, QX et al. 2018. J Agric Food Chem pp.doi: 10.1021/acs.jafc.8b03865     Reference: September 24th, 2018
Gene Product: May 26th, 2016
Variation: May 26th, 2016
Gene Model: May 26th, 2016
23 days agowx1 waxy1: amylopectin (stained red by iodine) replaces amylose (blue staining) in endosperm and pollen; extensive allelic series; application: highly branched starch has gelling properties, used for food gels, adhesives, and other industrial purposes; SSRs phi022, 027, 061NCBI: granule-bound starch synthase 1, chloroplastic/amyloplastic
9.03
   Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422     Reference: September 24th, 2018
Gene Product: June 4th, 2008
Variation: March 4th, 2017
23 days agopbf1 prolamin-box binding factor1: endosperm cDNA, SSR umc1065
2.06
   Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422     Reference: September 24th, 2018
Gene Product: September 1st, 2003
Variation: April 20th, 2005
23 days agophp20793  :
8.08
GRMZM2G166441
Beavis, WD et al. 1991. Theor Appl Genet 83:141-145     Reference: September 1st, 2003
Variation: September 24th, 2018
Gene Model: September 2nd, 2018
23 days agowrky22 WRKY-transcription factor 22: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.09
GRMZM2G111354
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: September 24th, 2018
23 days agoglk101 G2-like-transcription factor 1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.02
GRMZM2G064197
Bai, JR et al. 2018. Genetica pp.doi: 10.1007/s10709-018-0042-y     Reference: September 24th, 2018
Variation: September 1st, 2003
Gene Model: September 6th, 2018
23 days agocadtfr8 CCAAT-DR1-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.07
GRMZM5G866699
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: September 24th, 2018
23 days agoumc1005  :
8.08
GRMZM2G091121
    Variation: September 1st, 2003
Gene Model: September 24th, 2018
23 days agosm2 salmon silk2: like sm1; silks salmon color with P1-rr and P1-wr, brown with P1-ww
2.07
GRMZM2G180283
Li, QX et al. 2018. J Agric Food Chem pp.doi: 10.1021/acs.jafc.8b03865     Reference: September 24th, 2018
Gene Product: May 26th, 2016
Variation: May 26th, 2016
Gene Model: May 26th, 2016
23 days agoumc1268  :
8.07
GRMZM2G112912
    Variation: September 1st, 2003
Gene Model: September 24th, 2018
23 days agoohp1 opaque2 heterodimerizing protein1: o2 heterodimerizing protein; one of two loci
1.11
   Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422     Reference: September 24th, 2018
Gene Product: September 1st, 2003
Variation: February 2nd, 2015
23 days agogrp1 glycine-rich protein1: protein with high glycine content and repetitive glycine stretches; putative cell wall components
1.08
   Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422     Reference: September 24th, 2018
Gene Product: September 1st, 2003
Variation: June 5th, 2014
23 days agoubf9 ubiquitin fusion protein9: genomic sequence, hybridizing mRNA expressed during cell division and/or cell growth; multiple copies in genome
 
GRMZM2G431821
Chen, K and Rubenstein, I. 1991. Gene 107:205-212     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 24th, 2018
23 days agoumc1607  :
8.07
GRMZM2G033330
    Variation: September 1st, 2003
Gene Model: September 24th, 2018
23 days agobzip22 bZIP-transcription factor 22: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422   AT1G43700 (TAIR) Reference: September 24th, 2018
Gene Product: August 21st, 2018
Variation: September 24th, 2018
23 days agotcptf29  : Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.09
GRMZM2G148022
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: November 2nd, 2014
Gene Model: September 24th, 2018
23 days agoumc1663  :
8.09
GRMZM2G160444
    Variation: September 1st, 2003
Gene Model: September 24th, 2018
23 days agoumc1673  :
8.08
GRMZM2G139374
    Variation: September 1st, 2003
Gene Model: September 24th, 2018
23 days agomybr51 MYB-related-transcription factor 51:
5.09
GRMZM5G811428
Bai, JR et al. 2018. Genetica pp.doi: 10.1007/s10709-018-0042-y     Reference: September 24th, 2018
Variation: September 1st, 2003
Gene Model: February 2nd, 2018
23 days agosbe3 starch branching enzyme3:
8.06
GRMZM2G005298
Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422     Reference: September 24th, 2018
Gene Product: June 6th, 2011
Variation: June 1st, 2011
Gene Model: September 23rd, 2018
23 days agozp27 27-kDa zein protein: proline rich; least abundant of zeins in endosperm, not clear if all in zp27 cluster
7.02
   Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422     Reference: September 24th, 2018
Gene Product: September 17th, 2010
Variation: September 16th, 2010
23 days agoAY110053  : similar to Arabidopsis protein kinase family protein
8.08
GRMZM2G139223
    Variation: July 29th, 2004
Gene Model: September 24th, 2018
23 days agoremo2 remorin2:
1.01
GRMZM2G137352
Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422     Reference: September 24th, 2018
Gene Product: September 24th, 2018
Gene Model: September 24th, 2018
23 days agofnsi1 flavone synthase typeI1: Encodes a flavone synthase that is of the soluble Fe2+/2- oxoglutarate-dependent dioxygenase class
 
GRMZM2G099467
Li, QX et al. 2018. J Agric Food Chem pp.doi: 10.1021/acs.jafc.8b03865   AT5G24530 (TAIR) Reference: September 24th, 2018
Gene Product: August 15th, 2015
Variation: August 14th, 2015
Gene Model: August 14th, 2015
23 days agoremo1 remorin1:
 
GRMZM2G107774
Jamann, TM et al. 2016. Theor Appl Genet 129:591-602     Reference: February 29th, 2016
Gene Product: September 24th, 2018
Variation: February 6th, 2016
Gene Model: February 6th, 2016
23 days agougt1 UDP-glucosyl transferase1:
 
GRMZM2G162755
Tohge, T et al. 2017. J Exp Bot 68:4013-4028     Reference: September 20th, 2017
Gene Product: September 24th, 2018
Gene Model: May 6th, 2016
23 days agofns1 flavone synthase1:
 
GRMZM2G167336
Li, QX et al. 2018. J Agric Food Chem pp.doi: 10.1021/acs.jafc.8b03865     Reference: September 24th, 2018
Gene Product: September 20th, 2017
Gene Model: May 6th, 2016
23 days agocgt1 C-glucosyl transferase1:
 
GRMZM2G162783
Li, QX et al. 2018. J Agric Food Chem pp.doi: 10.1021/acs.jafc.8b03865     Reference: September 24th, 2018
Gene Product: September 24th, 2018
Gene Model: September 24th, 2018
23 days agoglk58 G2-like-transcription factor 58: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
6.06
GRMZM2G117854
Bai, JR et al. 2018. Genetica pp.doi: 10.1007/s10709-018-0042-y     Reference: September 24th, 2018
Variation: September 25th, 2007
Gene Model: February 2nd, 2018
23 days agocchh7 Cys2His2 Zinc Finger7:
7.01
GRMZM2G144645
Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422     Reference: September 24th, 2018
Gene Product: April 4th, 2017
Gene Model: September 24th, 2018
23 days agoohp3 opaque2 heterodimerizing protein3:
8.05
GRMZM2G143469
Li, CB et al. 2018. Plant Cell pp.doi: 10.1105/tpc.18.00422     Reference: September 24th, 2018
Gene Product: August 21st, 2018
Gene Model: September 24th, 2018
24 days agobnlg1031  : similar to Arabidopsis 4,5-DOPA dioxygenase extradiol-like protein
8.06
GRMZM2G092817
    Variation: September 1st, 2003
Gene Model: September 23rd, 2018
24 days agoumc2356  :
8.06
GRMZM2G054341
    Variation: September 23rd, 2018
Gene Model: September 23rd, 2018
24 days agoAY109883  :
8.06
GRMZM2G312365
    Variation: July 29th, 2004
Gene Model: September 23rd, 2018
25 days agopgd3 phosphogluconate dehydrogenase3: single copy cDNA, csu843, similar to alfalfa enzyme; pentose phosphate pathway
4.03
GRMZM2G440208
Trevisan, S et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12839     Reference: September 22nd, 2018
Gene Product: September 1st, 2003
Variation: February 28th, 2013
Gene Model: July 28th, 2016
25 days agosod4 superoxide dismutase4: electrophoretic mobility; cytosolic; Cu-Zn dimeric; intralocus hybrid bands occur; two similar sequences X17564 (sod4), X17565(sod4A)
1.04
   Trevisan, S et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12839     Reference: September 22nd, 2018
Gene Product: February 12th, 2007
Variation: April 20th, 2005
25 days agompk7 MAP kinase7:
 
GRMZM2G002100
Trevisan, S et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12839     Reference: September 22nd, 2018
Gene Product: July 12th, 2013
Variation: January 18th, 2013
Gene Model: July 9th, 2013
25 days agoupb1 upbeat1: transcription factor with a bHLH domain; transcriptional regulation affected by nitrate
 
GRMZM2G040364
Trevisan, S et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12839   AT2G47270 (TAIR) Reference: September 22nd, 2018
Gene Product: September 14th, 2016
Gene Model: September 22nd, 2018
25 days agomkk2 mitogen-activated protein kinase kinase2:
 
GRMZM2G400470
Trevisan, S et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12839   AT4G29810 (TAIR) Reference: September 22nd, 2018
Gene Product: July 12th, 2013
Gene Model: September 22nd, 2018
25 days agoprx112 peroxidase112:
 
GRMZM2G033985
Trevisan, S et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12839     Reference: September 22nd, 2018
Gene Product: September 18th, 2015
Gene Model: September 22nd, 2018
25 days agoprx39 peroxidase39:
 
GRMZM2G085967
Trevisan, S et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12839     Reference: September 22nd, 2018
Gene Product: September 18th, 2015
Gene Model: September 22nd, 2018
25 days agoprx64 peroxidase64:
 
GRMZM2G076562
Trevisan, S et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12839     Reference: September 22nd, 2018
Gene Product: September 18th, 2015
Gene Model: September 22nd, 2018
25 days agoss1 starch synthase I: single copy endosperm specific cDNA; encoded-protein cross-reacts with antibody to granule associated starch synthase I
9.02
   Xie, Y et al. 2018. Frontiers Plant Sci 9:1252     Reference: September 22nd, 2018
Gene Product: October 14th, 2016
Variation: October 7th, 2010
25 days agopgd4 phosphogluconate dehydrogenase4:
10.04
GRMZM2G177077
Trevisan, S et al. 2018. Physiol Plant pp.doi: 10.1111/ppl.12839     Reference: September 22nd, 2018
Gene Product: September 1st, 2003
Gene Model: September 22nd, 2018
27 days agobnlg1651  :
8.05
GRMZM2G020544
    Variation: September 1st, 2003
Gene Model: September 20th, 2018
27 days agodof5 C2C2-Dof-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.05
GRMZM5G880268
Chen, Y; Cao, J. 2014. Plant Mol Biol Rep pp.doi: 10.1007/s11105-014-0835-9     Reference: November 26th, 2014
Variation: September 20th, 2018
Gene Model: September 20th, 2018
27 days agoereb117 AP2-EREBP-transcription factor 117: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.05
GRMZM2G113078
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: September 20th, 2018
27 days agommt1 methionine S-methyltransferase1:
8.05
GRMZM2G098031
Bourgis, F. 1999. Plant Cell. 11:1485-1498     Reference: July 19th, 2004
Variation: September 20th, 2018
Gene Model: September 20th, 2018
28 days agobnlg1176a  :
8.05
GRMZM2G375222
    Variation: September 1st, 2003
Gene Model: September 19th, 2018
28 days agoumc1263  : similar to Arabidopsis BRCT domain-containing DNA repair protein
8.05
GRMZM2G372200
    Variation: September 1st, 2003
Gene Model: September 19th, 2018
28 days agoiaa38 Aux/IAA-transcription factor 38: similar to Arabidopsis auxin-responsive protein IAA27Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.04
GRMZM2G035465
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: September 19th, 2018
28 days agosweet3a sugars will eventually be exported transporter3a:
8.04
GRMZM2G179679
Oszvald, M et al. 2018. Plant Physiol pp.DOI: 10.1104/pp.17.01673     Reference: February 7th, 2018
Gene Product: November 4th, 2015
Gene Model: September 19th, 2018
28 days agoumc1959  :
8.05
GRMZM2G090963
    Variation: September 1st, 2003
Gene Model: September 19th, 2018
28 days agoumc1562  :
8.05
GRMZM2G059693
    Variation: September 19th, 2018
Gene Model: September 19th, 2018
28 days agocadtfr15 CCAAT-DR1-transcription factor 15: cDNA 5C05F12 similar to binding protein; single copyLocus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.04
GRMZM2G064426
Zhang, Z et al. 2016. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2016.08.020     Reference: August 8th, 2016
Gene Product: August 9th, 2016
Variation: September 1st, 2003
Gene Model: September 19th, 2018
28 days agoAY110056  : Protein trichome birefringence-like 25
8.04 - 8.04
GRMZM2G131152
    Variation: September 25th, 2007
Gene Model: September 19th, 2018
28 days agoras7B2 ras-related protein7B2:
 
GRMZM5G811797
Zhang, JM et al. 2007. J Integr Plant Biol 49:1129-1141     Reference: January 12th, 2011
Variation: January 20th, 2011
Gene Model: September 19th, 2018
28 days agorps28 ribosomal protein S28: cDNA; SSR umc1741
 
GRMZM2G030293
Chevalier, C et al. 1996. Plant Sci 117:95-105     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 19th, 2018
Gene Model: September 18th, 2018
29 days agophi121  :
8.03
GRMZM2G136567
Senior, ML et al. 1996. MNL 70:50-54     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 18th, 2018
29 days agopro1 proline responding1: (allele o6) crumpled opaque kernel; green-striped lethal seedling; responds to proline in culture
8.04
GRMZM2G375504
Zhang, SS et al. 2018. Plant Reproduction pp.doi: 10.1007/s00497-018-0344-3     Reference: July 7th, 2018
Gene Product: March 19th, 2015
Variation: September 18th, 2018
Gene Model: June 22nd, 2014
29 days agobnlg1863  :
8.03
GRMZM2G022768
    Variation: September 1st, 2003
Gene Model: September 18th, 2018
29 days agobnlg2082  :
8.03
GRMZM5G842965
    Variation: September 1st, 2003
Gene Model: September 18th, 2018
29 days agoumc1157  :
8.03
GRMZM2G058913
    Variation: September 1st, 2003
Gene Model: September 18th, 2018
29 days agoumc1415  :
8.03
GRMZM2G063676
    Variation: September 1st, 2003
Gene Model: September 18th, 2018
29 days agoumc1470  :
8.03
GRMZM2G145573
    Variation: September 1st, 2003
Gene Model: September 18th, 2018
29 days agoumc1735  :
8.03
GRMZM2G164090
Noonan, J et al. 2017. Int J Mol Sci 8:E1938     Reference: September 16th, 2017
Variation: September 1st, 2003
Gene Model: September 18th, 2018
29 days agockx10 cytokinin oxidase10: Mapped the minor band to this site.
1.07
GRMZM2G348452
Smehilova, M; et al. 2009. J Exp Bot. 60:2701-12     Reference: March 25th, 2014
Gene Product: April 4th, 2014
Variation: September 1st, 2003
Gene Model: September 18th, 2018
29 days agoumc120a  :
8.03
GRMZM2G578572
Beavis, WD et al. 1991. Theor Appl Genet 83:141-145     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 18th, 2018
29 days agomads1 MADS1: transcripts detected in egg cells and invivo zygotes of maize, also expressed in synergids and antipodal cells. during flower development expressed in all ear spikelet organ primordia at intermediate stages
9.07
   Guo, L et al. 2018. Curr Biol pp.doi: 10.1016/j.cub.2018.07.029     Reference: September 18th, 2018
Gene Product: September 1st, 2003
Variation: April 15th, 2008
29 days agoAY110032  :
8.03
GRMZM2G102745
    Variation: July 29th, 2004
Gene Model: September 18th, 2018
29 days agoAY110450  : BRCA1/BRCA2-containing complex subunit 3
8.03
GRMZM2G152436
    Variation: July 29th, 2004
Gene Model: September 18th, 2018
29 days agompk3 MAP kinase3: transcript and protein activity upregulated by ABA and H2O2
1.03
GRMZM2G017792
Liu, JX et al. 2018. PLoS One 13:e0203612     Reference: September 18th, 2018
Gene Product: July 9th, 2013
Variation: July 12th, 2013
Gene Model: July 9th, 2013

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