Newly Characterized Genes

CHECK HERE FOR DESCRIPTIONS OF NEWLY CHARACTERIZED MAIZE GENES!

With the overwhelming number of genes that are being discovered by phenotypic and sequence analyses, the MaizeGDB staff is missing some that should be included in MaizeGDB. We need your help! Please let us know about new genes that you're working on or have recently read about.

MaizeGDB prefers not to assign formal gene names to gene models based purely on orthology. Known difficulties include inclusivity (there are over 10,000 functionally characterized Arabidopsis genes)* and some likelihood of errors in inferred functions. Unlike gene models, gene names are generally conserved unless differently named genes are found to be allelic. Of particular note, naming priveleges are customarily held by researchers who first confirm function.

We encourage researchers to use the annotation tool on the MaizeGDB gene model pages to add their insights about putative function, especially when not currently part of the Phytozome or Gramene pipelines.

Below is a list of newly reported or newly characterized genes (new reference, new gene product, and/or new variation) with which you may not yet be familiar. The genes are sorted by the last time the gene has been updated. To suggest genes for inclusion in this list, email us and include the gene name, full name, chromosome or bin, and a recent reference.

If you cannot find the gene you would like to recommend in the database, send us an email so that we can add it to the database!

This page is based on our monthly release. The updates are made around 4:00am CST.


         Recommended Genes


One month | Six months | One year | All time

New or updated genes since one month ago. The cutoff date is March 4th, 2020.

Last UpdateGeneFull Name : DescriptionChromosome
or Bin
Gene
Model
Recent ReferenceOrthologsUpdate information
yesterdaymlo8 barley mlo defense gene homolog8: one of 9 seven-transmembrane homologues to barley powdery mildew defense response gene
6.05
GRMZM5G881803
Wang, YL et al. 2020. G3 pp.doi: 10.1534/g3.120.401069     Reference: April 3rd, 2020
Gene Model: September 4th, 2014
Recommended by Marty Sachs:
March 7th, 2007
yesterdayms33 male sterile33:
2.09
GRMZM2G070304
Shi, HC et al. 2020. Int J Mol Sci 21:2500   LOC_Os11g45400 (MSU/TIGR) Reference: April 3rd, 2020
Gene Product: March 25th, 2019
Variation: December 4th, 2018
Gene Model: March 17th, 2018
yesterdaypzb01301  :
10.02
   Yan, Z et al. 2020. J Plant Physiol 248:153158     Reference: April 3rd, 2020
Variation: December 31st, 2017
yesterdaygpa1 glyceraldehyde-3-phosphate dehydrogenase1: chloroplastic, A subunit; cDNA subclone GAPA1S (aka umc188) probes one site on 2S (correction from previous maps); two pseudogenes have been identified, and leaf cDNA csu140 hybridizes to 2 other bands
8.03
   Yan, Z et al. 2020. J Plant Physiol 248:153158     Reference: April 3rd, 2020
Gene Product: September 1st, 2003
Variation: April 12th, 2013
yesterdaypep1 phosphoenolpyruvate carboxylase1: cytosolic C4 isozyme; single copy, similar to C3-PEPCase genes; cDNA complements E. coli mutant; genomic and partial amino acid sequences compare; SSR phi065
9.03
   Yan, Z et al. 2020. J Plant Physiol 248:153158     Reference: April 3rd, 2020
Gene Product: September 1st, 2003
Variation: February 10th, 2020
yesterdayssu1 ribulose bisphosphate carboxylase small subunit1: probed locus; SSRs phi092,phi093
4.08
   Yan, Z et al. 2020. J Plant Physiol 248:153158     Reference: April 3rd, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
yesterdaypsb29 photosystem II subunit29:
7.04
GRMZM2G033885
Yan, Z et al. 2020. J Plant Physiol 248:153158     Reference: April 3rd, 2020
Gene Product: September 1st, 2003
Variation: January 8th, 2015
Gene Model: January 8th, 2015
yesterdayoec2 oxygen evolving complex2:
2.03
GRMZM2G021617
Yan, Z et al. 2020. J Plant Physiol 248:153158     Reference: April 3rd, 2020
Variation: February 6th, 2015
Gene Model: October 13th, 2018
yesterdayumc1300  :
3.05
GRMZM2G046061
    Variation: September 1st, 2003
Gene Model: April 3rd, 2020
yesterdaygpb1 glyceraldehyde phosphate dehydrogenase B1: leaf cDNA csu152 similar to Arabidopsis GapB
1.01
GRMZM5G845611
Yan, Z et al. 2020. J Plant Physiol 248:153158     Reference: April 3rd, 2020
Gene Product: September 1st, 2003
Variation: April 18th, 2006
Gene Model: April 12th, 2013
yesterdaypdk1 pyruvate, orthophosphate dikinase1: cDNA, genomic and peptide sequences; microsatellite mapped (SSRs phi025, phi078, phi081; nc012 ); cytosolic or plastidic, dependent on transcript processingmutant seedlings are pale green and lethal once kernel reserves are exhaused, even when plants were grown under 2% CO2
6.05
GRMZM2G306345
Yan, Z et al. 2020. J Plant Physiol 248:153158     Reference: April 3rd, 2020
Gene Product: July 28th, 2014
Variation: April 18th, 2018
Gene Model: November 21st, 2012
yesterdaytha1 thylakoid assembly1: Required for thylakoid protein targeting via the cpSec pathway. SecA homolog. (A. Barkan, 2015)pale green, high chlorophyll fluorescence, seedling lethat; thylakoid protein targeting by sec pathway
3.04
GRMZM5G880102
Belcher, S et al. 2015. Biochem Biophys Acta 1847:1004-1016   AT4G01800 (TAIR)
LOC_Os01g21820 (MSU/TIGR)
Os01g0321300 (Gramene)
Reference: December 1st, 2015
Gene Product: July 22nd, 2009
Variation: June 25th, 2004
Gene Model: April 3rd, 2020
yesterdaypsad1 photosystem I subunit d1: Designated from Zhao,Y.Y. and Bogorad,L. unpublished submission to GenBank
5.01
GRMZM2G024150
Yan, Z et al. 2020. J Plant Physiol 248:153158     Reference: April 3rd, 2020
Gene Product: September 1st, 2003
Variation: December 19th, 2014
Gene Model: December 19th, 2014
yesterdaycol12 2C2-CO-like-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.NCBI: zinc finger protein CONSTANS-LIKE 16
5.07
GRMZM2G041991
Yan, Z et al. 2020. J Plant Physiol 248:153158     Reference: April 3rd, 2020
Gene Product: September 1st, 2003
Variation: March 31st, 2017
Gene Model: March 31st, 2017
yesterdayoec33 oxygen evolving complex, 33kDa subunit: (was umc172) cDNA identified by hybrid-selection, in vitro translation and immunoprecipitation with antisera against spinach OEC33
6.02
GRMZM2G175562
Yan, Z et al. 2020. J Plant Physiol 248:153158     Reference: April 3rd, 2020
Gene Product: September 1st, 2003
Variation: September 16th, 2014
Gene Model: September 16th, 2014
yesterdaypsa6 photosystem I reaction center6: leaf cDNA csu67, similar to barley photosystem I subunit
7.01
GRMZM2G012397
Yan, Z et al. 2020. J Plant Physiol 248:153158     Reference: April 3rd, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: January 8th, 2015
yesterdayoec17 oxygen evolving complex, 17kDa homolog: leaf cDNA csu229 similar to plant oxygen evolving complex polypeptide
7.03
GRMZM2G058070
Yan, Z et al. 2020. J Plant Physiol 248:153158     Reference: April 3rd, 2020
Gene Product: September 1st, 2003
Variation: July 18th, 2012
Gene Model: September 11th, 2018
yesterdaygrftf2 GRF-transcription factor 2: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.07
   Yan, Z et al. 2020. J Plant Physiol 248:153158     Reference: April 3rd, 2020
Variation: September 25th, 2007
yesterdayhdt102 histone deacetylase102:
8.05
GRMZM2G100146
Yan, Z et al. 2020. J Plant Physiol 248:153158     Reference: April 3rd, 2020
Gene Product: February 12th, 2020
Variation: November 25th, 2008
Gene Model: July 27th, 2016
yesterdayhxa102 histone acetyltransferase complex component102:
 
GRMZM2G177974
Yan, Z et al. 2020. J Plant Physiol 248:153158     Reference: April 3rd, 2020
Gene Product: August 28th, 2017
Variation: August 28th, 2017
Gene Model: August 28th, 2017
yesterdayggh1 geranylgeranyl hydrogenase1:
 
GRMZM2G105644
Yan, Z et al. 2020. J Plant Physiol 248:153158     Reference: April 3rd, 2020
Gene Product: October 4th, 2014
Gene Model: October 4th, 2014
yesterdayms*-305 male sterile*-305:
 
   Wang, Y et al. 2015. Israel Journal of Plant Sciences pp.DOI:10.1080/07929978.2015.1075316     Reference: August 24th, 2015
Variation: April 3rd, 2020
yesterdaycdpk15 calcium dependent protein kinase15:
 
GRMZM2G441511
Wang, YL et al. 2020. G3 pp.doi: 10.1534/g3.120.401069     Reference: April 3rd, 2020
Gene Product: December 3rd, 2013
Gene Model: January 10th, 2018
2 days agoa2 anthocyaninless2: like a1, but red pericarp with P1-rr
5.03
   Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: June 7th, 2012
Variation: September 1st, 2003
2 days agobz1 bronze1: modifies purple aleurone and plant color to pale or reddish brown; anthers yellow-fluorescent; allele bz1-m4 = sh1-bz1-m4; SSR phi017NCBI: UDPG-flavonoid 3-oxy glucosyl transferase
9.02
   Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: July 4th, 2018
Variation: November 20th, 2018
2 days agobz2 bronze2: like bz1; anthers not fluorescent; an1-6923 mutation includes deletion for Bz2; encodes a glutathione S-transferase conjugating anthocyanins into the vacuole
1.08
   Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: September 1st, 2003
Variation: March 31st, 2008
2 days agod8 dwarf plant8: Dominant D8 plants resemble d1; extreme alleles not responsive to gibberellins.
1.09
GRMZM2G144744
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: February 12th, 2007
Variation: August 29th, 2007
Gene Model: May 11th, 2011
2 days agog2 golden plant2: (aka g5, pg14, v19, pg-m, bsd1) golden pale-green, weak plants; sheaths whitish yellow-green; pg-m (now g2-pg14::I) of Peterson is a mutable allele that responds to En; small bundle sheath plastids; SSR umc2101, umc2102, umc2103, umc2104, umc2105, umc2106, umc2107, umc2108.pale green seedling lethal, reduced Rubisco and NADP-malic enzyme, small bundle sheath plastids
3.00 - 3.01
GRMZM2G087804
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: July 11th, 2019
Variation: October 24th, 2017
Gene Model: August 30th, 2013
2 days agoo2 opaque endosperm2: like o1; high lysine content; regulates b-32 protein (see rip1); reduced lysine degradation (lysine-ketoglutaric reductase); SSRs phi057, 112
7.01
   Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: September 1st, 2003
Variation: June 6th, 2016
2 days agopl1 purple plant1: Pl1 plant tissues have light-independent pigment, pl1 blue light-dependent; Pl1-Bh1, colored patches in c1 aleurone and in plant; transcriptional activator for flavonoid genes; SSR phi031, nc009, nc010. umc1014
6.04
   Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: June 16th, 2015
Variation: March 28th, 2013
2 days agor1 colored1: regulates anthocyanin pathway; dominant R1 (S element) confers function in aleurone; dominants represented by R1-r or r1-r (P element) confer function in anthers, leaf tip, brace roots, etc.
10.06
   Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: October 13th, 2010
Variation: January 6th, 2018
2 days agots1 tassel seed1: tassel pistillate and pendant; if removed, small ear with irregular kernel placement develops
2.04 - 2.05
   Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: January 3rd, 2018
Variation: September 5th, 2019
2 days agoufo1 unstable factor for orange1: dominant Ufo1 plants have orange color in anthers, silks, and most other plant parts in presence of P1-wr or P1-rr; growth retarded
10.03
GRMZM2G053177
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Variation: December 19th, 2018
Gene Model: December 19th, 2018
2 days agolox10 lipoxygenase10: green leaf volatiles, circadian, herbivore defense; sequence predicts plastidic location; images show location in non-chlorophyll containing organelles
4.09
GRMZM2G015419
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: January 3rd, 2018
Variation: February 28th, 2020
Gene Model: October 29th, 2015
2 days agofnr2 ferredoxin NADP reductase2:
7.01
GRMZM2G011858
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Variation: October 9th, 2009
Gene Model: September 4th, 2018
2 days agomads69 MADS-transcription factor 69: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.contributes to natural variation in flowering time in maize
 
   Liu, HJ, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.19.00934     Reference: April 2nd, 2020
Variation: October 5th, 2018
2 days agosbp22 SBP-transcription factor 22: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Liu, HJ, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.19.00934     Reference: April 2nd, 2020
Gene Product: July 5th, 2019
2 days agobzip22 bZIP-transcription factor 22: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080   AT1G43700 (TAIR) Reference: April 2nd, 2020
Gene Product: August 21st, 2018
Variation: September 24th, 2018
2 days agofea4 fasciated ear4: Mutants are semidwarfed with fasciated ears and tassels as well as greatly enlarged vegetative and inflorescence meristems.
 
   Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: August 21st, 2018
Variation: July 7th, 2017
2 days agoris2 iron-sulfur protein2: one of two very similar cDNAs recovered by antiserum screen from B73 seedling leaf RNA, both transcribed in leaf tissue (Barkan and Walker 1994)cDNA csu271, gene specific, one of two very similar cDNAs for chloroplastic iron-sulfur protein
4.09
GRMZM2G038365
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: November 5th, 2014
Variation: November 1st, 2014
Gene Model: October 31st, 2014
2 days agoris1 iron-sulfur protein1: one of two very similar cDNAs recovered by antiserum screen from B73 seedling leaf RNA, both transcribed in leaf tissue (Barkan and Walker 1994)
5.04
GRMZM2G162748
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: November 5th, 2014
Variation: October 31st, 2014
Gene Model: October 31st, 2014
2 days agomyc7 myc transcription factor7: transcription factor induced by iron starvation; restores yeast fet3 fet4
1.05
GRMZM2G001930
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: September 14th, 2016
Variation: November 10th, 2005
Gene Model: July 28th, 2016
2 days agoMuk Mu killer: Mu killer methylates mutator TIRs and acts dominantly to silence active Mutator systems.
 
   Burgess, D et al. 2020. Genetics pp.doi: 10.1534/genetics.120.303033     Reference: April 2nd, 2020
Variation: November 12th, 2004
2 days agocol11 C2C2-CO-like-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also
2.04
GRMZM2G095598
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: June 18th, 2018
Variation: October 9th, 2018
Gene Model: June 18th, 2018
2 days agoaos1 allene oxide synthase1: expression induction by herbivory and methyl jasmonate
9.06
GRMZM2G067225
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: September 1st, 2003
Variation: September 24th, 2010
Gene Model: October 29th, 2015
2 days agolox7 lipoxygenase7:
10.04
GRMZM2G070092
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: January 3rd, 2018
Variation: April 23rd, 2009
Gene Model: June 10th, 2014
2 days agolox9 lipoxygenase9:
1.02
GRMZM2G017616
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: January 3rd, 2018
Variation: June 12th, 2014
Gene Model: October 23rd, 2013
2 days agolox11 lipoxygenase11:
5.04
GRMZM2G009479
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: January 3rd, 2018
Variation: June 10th, 2014
Gene Model: June 10th, 2014
2 days agotrps1 trehalose-6-phosphate synthase1:
 
GRMZM2G068943
Liu, HJ, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.19.00934     Reference: April 2nd, 2020
Gene Product: September 15th, 2013
Gene Model: May 28th, 2012
2 days agoaos2 allene oxide synthesis2:
 
GRMZM2G072653
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: September 1st, 2003
Gene Model: October 29th, 2015
2 days agonkd1 naked endosperm1: double mutants have multiple (2-5) layers of peripheral endosperm cells that lack starch granules or other features of starchy endosperm
 
GRMZM2G129261
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: January 3rd, 2015
Variation: January 3rd, 2015
Gene Model: January 2nd, 2015
2 days agoaos4 allene oxide synthesis4:
 
GRMZM2G072653
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: September 1st, 2003
Gene Model: October 29th, 2015
2 days agoaos3 allene oxide synthesis3:
 
GRMZM2G376661
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: September 1st, 2003
Gene Model: October 29th, 2015
2 days agolox13 lipoxygenase13:
 
GRMZM5G822593
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: January 3rd, 2018
Gene Model: July 18th, 2017
2 days agoknr6 kernel number per row6: involved in determination of pistillate floret number and ear lengthKNR6 appears to phosphorylate an Arf GTPase-activating protein, a myelin basic protein, as well as itself. Jia et al, 2020qKNR6 was first identified as a QTL for "Kernel number per row".
 
GRMZM2G119714
Jia, HT, et al. 2020. Nature communications. 11:988     Reference: April 2nd, 2020
Gene Product: May 13th, 2014
Variation: February 20th, 2020
Gene Model: February 20th, 2020
2 days agoaos5 allene oxide synthesis5:
 
GRMZM2G033098
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: September 1st, 2003
Gene Model: March 19th, 2020
2 days agohmt2 homocysteine S-methyltransferase 2:
 
GRMZM2G117240
Ranocha, P et al. 2001. Plant J 25:575-584     Reference: September 1st, 2003
Gene Product: July 19th, 2004
Gene Model: April 2nd, 2020
2 days agodxs2 deoxy xylulose synthase 2: root specific; function inferred from sequence and expression pattern comparison with Medicago trunculata genes
9.03
GRMZM2G493395
Liu, HJ, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.19.00934     Reference: April 2nd, 2020
Gene Product: August 17th, 2004
Variation: September 17th, 2019
Gene Model: December 9th, 2011
2 days agoglk1 G2-like1: g2 golden2 paralog; specifically affects mesophyll chloroplast assembly, but not bundle sheath chloroplast assembly (Wang et al 2013)
9.00
GRMZM2G026833
Li, X et al. 2020. Communications Biology 3:151     Reference: April 2nd, 2020
Gene Product: July 11th, 2019
Variation: May 9th, 2009
Gene Model: September 27th, 2012
3 days agogex2 gamete expressed2: mutants have reduced transmission (<35% for two independent insertions), and also triggered seed defects when crossed as a male
 
GRMZM2G036832
Warman, C et al. 2020. PLoS Genetics pp.doi: 10.1371/journal.pgen.1008462   AT5G49150 (TAIR) Reference: April 1st, 2020
Gene Product: February 25th, 2020
Variation: February 25th, 2020
Gene Model: February 25th, 2020
4 days agopti1 pto-interacting1: specifically expressed in pollen and sequestered to the plasma membrane; co-localization callose was observed during stages of pollen mitosis I and pollen tube germination
3.04
GRMZM2G378547
Herrmann, MM et al. 2006. BMC Plant Biology 6:22     Reference: March 31st, 2020
Gene Product: May 13th, 2014
Gene Model: February 23rd, 2019
4 days agopti3 pto-interacting3:
 
GRMZM2G029530
Herrmann, MM et al. 2006. BMC Plant Biology 6:22     Reference: March 31st, 2020
Gene Product: May 13th, 2014
Gene Model: March 31st, 2020
4 days agopti4 pto-interacting4:
 
GRMZM2G001668
Herrmann, MM et al. 2006. BMC Plant Biology 6:22     Reference: March 31st, 2020
Gene Product: May 13th, 2014
Gene Model: March 31st, 2020
4 days agopti2 pto-interacting2:
10.03
GRMZM2G061447
Herrmann, MM et al. 2006. BMC Plant Biology 6:22     Reference: March 31st, 2020
Gene Product: May 13th, 2014
Gene Model: November 25th, 2019
5 days agozep1 zeaxanthin epoxidase1:
2.04
GRMZM2G127139
Schneider, HM et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20003     Reference: March 30th, 2020
Gene Product: December 10th, 2011
Variation: August 29th, 2011
Gene Model: April 8th, 2013
5 days agoarftf25 ARF-transcription factor 25: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.06
GRMZM2G116557
Schneider, HM et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20003     Reference: March 30th, 2020
Variation: August 22nd, 2017
Gene Model: August 22nd, 2017
5 days agoumc1347  :
3.04
GRMZM2G096548
    Variation: September 1st, 2003
Gene Model: March 30th, 2020
5 days agoumc1350  :
6.07
GRMZM2G038284
Zhuang, YL et al. 2008. Biol Plant 52:754-758     Reference: March 30th, 2020
Variation: September 1st, 2003
Gene Model: August 29th, 2018
5 days agotcptf26 TCP-transcription factor 26: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Schneider, HM et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20003     Reference: March 30th, 2020
Gene Product: September 27th, 2019
5 days agosus1 sucrose synthase1: (was sus2, css1) sucrose synthase-1 (SUS1) of embryo and other tissues, compare sh1; SSRs phi016, 032, 042
9.04
GRMZM2G152908
Schneider, HM et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20003     Reference: March 30th, 2020
Gene Product: October 25th, 2006
Variation: February 1st, 2020
Gene Model: August 12th, 2014
5 days agocl14964_1  :
3.04
GRMZM2G151653
    Variation: September 25th, 2007
Gene Model: March 30th, 2020
5 days agotrps11 trehalose-6-phosphate synthase11:
 
GRMZM2G122231
Schneider, HM et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20003     Reference: March 30th, 2020
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
6 days agoIDP876  :
3.04
GRMZM2G067223
    Variation: March 31st, 2005
Gene Model: March 29th, 2020
6 days agopco137802  :
3.04
GRMZM2G022088
    Variation: September 25th, 2007
Gene Model: March 29th, 2020
8 days agowx1 waxy1: amylopectin (stained red by iodine) replaces amylose (blue staining) in endosperm and pollen; extensive allelic series; application: highly branched starch has gelling properties, used for food gels, adhesives, and other industrial purposes; SSRs phi022, 027, 061NCBI: granule-bound starch synthase 1, chloroplastic/amyloplastic
9.03
   Qi, XT et al. 2020. The Crop Journal 10.1016/j.cj.2020.01.006     Reference: March 27th, 2020
Gene Product: June 4th, 2008
Variation: March 11th, 2020
9 days agoxer1 xerico1: encodes a RING finger domain type E3 ubiquitin ligaseOver-expression improves water use efficiency and drought tolerance in transgenic maize plants through reduction in ABA8OX proteins stability and ABA degradation.
2.07
GRMZM2G018070
Brugiere, N et al. 2017. Plant Physiol pp.doi: 10.1104/pp.17.01072     Reference: September 14th, 2017
Gene Product: March 26th, 2020
Gene Model: September 14th, 2017
9 days agoxer3 xerico3: encodes a RING finger domain type E3 ubiquitin ligase
 
GRMZM2G005840
Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Gene Product: March 26th, 2020
Variation: September 14th, 2017
Gene Model: September 14th, 2017
9 days agoxer2 xerico2: encodes a RING finger domain type E3 ubiquitin ligase
 
GRMZM2G393349
Brugiere, N et al. 2017. Plant Physiol pp.doi: 10.1104/pp.17.01072     Reference: September 14th, 2017
Gene Product: March 26th, 2020
Gene Model: September 14th, 2017
9 days agoxer4 xerico4: encodes a RING finger domain type E3 ubiquitin ligase
 
GRMZM2G029623
Brugiere, N et al. 2017. Plant Physiol pp.doi: 10.1104/pp.17.01072     Reference: September 14th, 2017
Gene Product: March 26th, 2020
Gene Model: September 14th, 2017
9 days agoupl13 ubiquitin-protein ligase13:
 
GRMZM2G104920
Huai, JL et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13099   AT2G32950 (TAIR) Reference: March 26th, 2020
Gene Product: March 26th, 2020
Gene Model: March 26th, 2020
9 days agoupl14 ubiquitin-protein ligase14:
 
GRMZM2G126795
Huai, JL et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13099   AT2G32950 (TAIR) Reference: March 26th, 2020
Gene Product: March 26th, 2020
Gene Model: March 26th, 2020
10 days agohsf1 hairy sheath frayed1: dominant Hsf1 plants have pubescent sheaths and leaf margins; liguled enations at leaf marginscytokinin receptor; cytokinin responsive histidine protein kinase
5.06 - 5.07
GRMZM2G151223
Muszynski, MG et al. 2020. Plant Cell pp.doi; 10.1105/tpc.19.00677     Reference: March 25th, 2020
Gene Product: May 20th, 2016
Variation: August 23rd, 2019
Gene Model: August 23rd, 2019
10 days agoodo1 alpha keto dehydrogenase candidate1: etiolated leaf cDNA 6C02A09 (uaz215) similar to microbial TCA cycle enzyme
10.04
   Eprinstev, AT et al. 2020. Russ J Plant Physiol 67:378-385     Reference: March 25th, 2020
Gene Product: September 1st, 2003
Variation: September 25th, 2007
10 days agokgdh1 alpha-ketoglutarate dehydrogenase:
 
GRMZM2G079538
Liu, YM et al. 2019. BMC Plant Biology 19:592     Reference: December 30th, 2019
Gene Product: March 25th, 2020
Gene Model: December 30th, 2019
10 days agoogdh1 2-oxoglutarate dehydrogenase1:
 
GRMZM2G142863
Eprinstev, AT et al. 2020. Russ J Plant Physiol 67:378-385     Reference: March 25th, 2020
Gene Product: March 25th, 2020
Gene Model: March 25th, 2020
10 days agoogdh2 2-oxoglutarate dehydrogenase2:
 
   Eprinstev, AT et al. 2020. Russ J Plant Physiol 67:378-385     Reference: March 25th, 2020
Gene Product: March 25th, 2020
10 days agosaur2 small auxin up RNA2:
 
GRMZM2G156470
Knauss, S et al. 2003. The auxin-induced maize gene ZmSAUR2 encodes a short-lived nuclear protein expressed in elongating tissues. J Biol Chem 278:23936-23943     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Gene Model: March 25th, 2020
11 days agophi453121a  : similar to Arabidopsis E3 ubiquitin-protein ligase SINAT3
3.00
GRMZM2G309063
    Variation: March 28th, 2018
Gene Model: March 24th, 2020
12 days agocsu622  :
2.09
GRMZM2G001444
    Variation: September 1st, 2003
Gene Model: March 23rd, 2020
12 days agobetl1c basal endosperm transfer layer1c:
2.09
GRMZM2G082785
Hueros, C et al. 1999. Plant Physiol 121:1143-1152     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 17th, 2012
Gene Model: March 23rd, 2020
12 days agonhx7 Na+/H+ antiporter 7: silicon up-regulates expression
 
GRMZM2G098494
Luo, J et al. 2020. Biol Plant 64:200-210   AT1G14660 (TAIR) Reference: March 23rd, 2020
Gene Product: August 25th, 2018
Gene Model: August 20th, 2018
12 days agonhx9 Na+/H+ antiporter 9:
 
GRMZM2G171507
Luo, J et al. 2020. Biol Plant 64:200-210     Reference: March 23rd, 2020
Gene Product: August 25th, 2018
Gene Model: March 23rd, 2020
12 days agoIDP2586  :
2.05
GRMZM2G106604
    Variation: March 31st, 2005
Gene Model: March 23rd, 2020
13 days agoumc1126  :
2.08
GRMZM2G021610
    Variation: September 1st, 2003
Gene Model: March 22nd, 2020
14 days agoagpsl1 ADP glucose pyrophosphorylase small subunit leaf1: leaf-specific
1.07
GRMZM2G163437
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: September 1st, 2003
Variation: April 3rd, 2011
Gene Model: June 15th, 2012
14 days agouaz265b(sbe)  :
 
GRMZM2G169073
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: September 1st, 2003
Gene Model: February 7th, 2015
14 days agoss6 starch synthase6:
5.03
   Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: October 14th, 2016
14 days agoae1 amylose extender1: glassy, tarnished endosperm; high amylose content; application: highly linear starch is used for food films, fibers, and other industrial purposes
5.04
   Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: June 6th, 2011
Variation: March 20th, 2020
14 days agobt1 brittle endosperm1: mature kernel collapsed, angular, often translucent and brittle (alleles sh3, sh5)
5.04
   Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: February 24th, 2015
Variation: March 16th, 2018
14 days agobt2 brittle endosperm2: like bt1; endosperm ADPG pyrophosphorylase subunit; with sh2 complements E. coli glgC
4.05
   Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: November 4th, 2014
Variation: December 4th, 2018
14 days agodu1 dull endosperm1: glassy, tarnished endosperm; encodes a starch synthase III, that with an isoamylase-type debranching enzyme represses accumulation of phytoglycogen
10.03
GRMZM2G141399
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: October 14th, 2016
Variation: June 29th, 2015
Gene Model: February 28th, 2012
14 days agosh2 shrunken2: inflated, transparent, sweet kernels collapse on drying, becoming angular and brittle; endosperm ADPG pyrophosphorylase subunit (compare bt2); application: "supersweet" sweet corn - kernels sugar-sweet for long period
3.09
   Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: November 4th, 2014
Variation: January 9th, 2019
14 days agosu1 sugary1: endosperm wrinkled and translucent when dry; starch debranching enzyme I absent in developing endosperm, phytoglycogen but no debranching enzyme in germinating seeds; su1-am sugary-amylaceous; su1-st recessive starchy; application: the "sweet corn" gene - recessive kernels are creamy-sweet at milk stage
4.05
   Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: April 21st, 2016
Variation: June 6th, 2016
14 days agosu2 sugary2: endosperm glassy, translucent, sometimes wrinkled
6.04 - 6.05
   Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: October 14th, 2016
Variation: October 7th, 2010
14 days agozpu1 pullulanase-type starch debranching enzyme1: single copy, cDNA clone similar to rice sequence; SSR umc1003The zpu1 gene encodes a pullulanase-type starch debranching enzyme. Analysis of plants homozygous for the zpu1-204 mutation reveal the genes role in starch catabolism. zpu1-204 endosperm accumulate maltooligosaccharides not found in wild type plants. zpu1-204 are also deficient for linear maltooligosaccharides.
2.05
GRMZM2G158043
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: October 25th, 2011
Variation: June 29th, 2015
Gene Model: November 20th, 2014
14 days agoumc1554  :
2.07
GRMZM2G002879
    Variation: September 1st, 2003
Gene Model: March 21st, 2020
14 days agogbss1 granule-bound starch synthase1:
 
GRMZM2G008263
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: June 4th, 2008
Variation: August 4th, 2011
Gene Model: November 20th, 2014
14 days agopho1 starch phosphorylase1: amyloplast starch phosphorylase
1.10
GRMZM2G074158
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: March 26th, 2015
Gene Model: March 26th, 2015
14 days agosbe1 starch branching enzyme1: maize kernel cDNA sequence is similar to starch branching enzyme I of bacteria, encodes a putative 64-amino acid plastid transit peptide (aka sbe1)
5.03
   Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: September 1st, 2003
Variation: January 5th, 2018
14 days agosbe3 starch branching enzyme3:
8.06
GRMZM2G005298
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: June 6th, 2011
Variation: June 1st, 2011
Gene Model: September 23rd, 2018
14 days agogss1 starch synthase homolog1: endosperm cDNA 5C04B10 (uaz218), similar to pea starch synthase isoform II
5.06
GRMZM2G105791
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: September 1st, 2003
Variation: October 7th, 2010
Gene Model: July 12th, 2018
14 days agoagpll1 ADP glucose pyrophosphorylase large subunit leaf1AGPL4:
1.10
GRMZM2G391936
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: January 3rd, 2014
Variation: September 22nd, 2017
Gene Model: September 22nd, 2017
14 days agoagp2 ADP glucose pyrophosphorylase2: embryo specific counterpart to sh2
6.07 - 6.08
GRMZM2G027955
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: July 22nd, 2015
Variation: June 15th, 2012
Gene Model: June 15th, 2012
14 days agopco099353  :
2.08
GRMZM2G151826
    Variation: September 25th, 2007
Gene Model: March 21st, 2020
14 days agoiso3 isoamylase-type starch debranching enzyme3:
 
GRMZM2G150796
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: October 25th, 2011
Variation: April 7th, 2011
Gene Model: July 28th, 2016
14 days agosu4 sugary4: duplicate factor: in combination with su3 gives sugary endosperm phenotype.
6.05
GRMZM2G090905
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: October 25th, 2011
Variation: June 3rd, 2011
Gene Model: October 24th, 2011
14 days agoagpll2 ADP glucose pyrophosphorylase large subunit leaf2:
 
GRMZM2G144002
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: January 3rd, 2014
Gene Model: January 7th, 2014
14 days agoss4 starch synthase4:
 
GRMZM2G044744
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: October 14th, 2016
Gene Model: December 5th, 2015
14 days agoss7 starch synthase7:
 
   Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: October 14th, 2016
14 days agosbe4 starch branching enzyme4:
 
GRMZM2G073054
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: June 6th, 2011
Gene Model: March 20th, 2020
14 days agoss3 starch synthase3:
 
GRMZM2G121612
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: October 14th, 2016
Gene Model: March 20th, 2020
14 days agoss2 starch synthase3:
 
GRMZM5G897776
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: October 14th, 2016
Gene Model: March 20th, 2020
14 days agogbss2 granule-bound starch synthase2:
 
   Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: June 4th, 2008
14 days agoisol1 isoamylase3-like1:
 
GRMZM2G385578
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: October 25th, 2011
Gene Model: March 21st, 2020
14 days agoss1 starch synthase I: single copy endosperm specific cDNA; encoded-protein cross-reacts with antibody to granule associated starch synthase I
9.02
   Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: October 14th, 2016
Variation: October 7th, 2010
14 days agopho2 starch phoshorylase2: cytosolic starch phosphorylase inferred from data in Yu et al 2001 (MS 2015)
3.06
GRMZM2G085577
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: March 26th, 2015
Gene Model: March 26th, 2015
14 days agoagp1 ADP glucose pyrophosphorylase small subunit embryo 1: embryo cDNA that hybridizes to endosperm transcripts, distinct from sh2 and bt2 but most similar to the bt2 gene product
2.06
GRMZM2G106213
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: January 3rd, 2014
Variation: November 4th, 2014
Gene Model: November 4th, 2014
15 days agosh1 shrunken1: inflated endosperm collapses on drying, forming smoothly indented kernels; sucrose synthase-sh1 of endosperm (compare sus1 and sus2); homotetramer; SSRs phi028, 044, 033
9.01
   He, W et al. 2020. Plant Mol Biol doi: 10.1007/s11103-020-0     Reference: March 20th, 2020
Gene Product: October 25th, 2006
Variation: February 1st, 2020
15 days agoZm00001d033937  :
 
   He, W et al. 2020. Plant Mol Biol doi: 10.1007/s11103-020-0     Reference: March 20th, 2020
Gene Product: June 4th, 2008
15 days agosus2 sucrose synthase2: Encodes sucrose synthase-2 (SUS2), one of 3 loci defined for this function; compare sh1 and sus1.
1.04
GRMZM2G318780
He, W et al. 2020. Plant Mol Biol doi: 10.1007/s11103-020-0     Reference: March 20th, 2020
Gene Product: October 25th, 2006
Variation: February 1st, 2020
Gene Model: August 3rd, 2013
16 days agoIDP738  :
1.10
GRMZM2G443453
Lin, M et al. 2020. G3 pp.doi: 10.1534/g3.119.400884     Reference: March 19th, 2020
Variation: March 31st, 2005
Gene Model: February 16th, 2019
17 days agomop1 mediator of paramutation1: recessive changes B' phenotype to dark, similar to B1-I
2.04
GRMZM2G042443
Vendramin, S et al. 2020. G3 doi: 10.1534/g3.119.40099     Reference: March 18th, 2020
Gene Product: August 8th, 2006
Variation: August 8th, 2006
Gene Model: April 24th, 2013
Recommended by Ed Coe:
January 8th, 2008
17 days agobx4 benzoxazinone synthesis4: endoplasmic reticulum P450 monoxygenase; synthesis of cyclic hydroxamates/DIMBOA; insect resistance in young seedlings; NAM SNP PHM1184
4.01
GRMZM2G172491
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: October 24th, 2011
Variation: October 27th, 2011
Gene Model: October 24th, 2011
17 days agosweet1a sugars will eventually be exported transporter1a:
3.06
GRMZM2G039365
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
17 days agobr2 brachytic2: like br1; mi1 is allelic and preceded (1935), but br2 name is retained due to long usagelike Arabidopsis ABC transporter B family member 1
1.06 - 1.07
GRMZM2G315375
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: May 1st, 2012
Variation: December 30th, 2019
Gene Model: April 28th, 2012
17 days agogpc1 glyceraldehyde-3-phosphate dehydrogenase1: cytosolic, C subunit, type 3 gene; coding region has sequence homology to gpc2, unique 3' untranslated region, constitutive expression; SSRs phi026, 079
4.05
   Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
17 days agocncr1 cinnamoyl CoA reductase1: Mutant results in plants with improved cell wall digestibility
1.07
GRMZM2G131205
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Variation: May 5th, 2017
Gene Model: June 23rd, 2016
17 days agoumc1135  :
3.07
GRMZM2G105863
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Variation: September 1st, 2003
Gene Model: March 30th, 2018
17 days agofrk2 fructokinase2:
6.00
GRMZM2G051677
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Variation: May 1st, 2010
Gene Model: July 29th, 2016
17 days agorps22a ribosomal protein S22 homolog:
9.06
GRMZM2G067303
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Variation: July 3rd, 2013
Gene Model: July 28th, 2016
17 days agogl13 glossy13: necrotic glossy leaf; plants that survive to maturity are sterile (both male and female) and smaller than nonmutant sibs.Ortholog of Poales ATP-binding cassette transporter, PDR-like subfamily G, domain 1
 
GRMZM2G118243
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: December 28th, 2015
Variation: December 19th, 2013
Gene Model: December 9th, 2013
17 days agoubf9 ubiquitin fusion protein9: genomic sequence, hybridizing mRNA expressed during cell division and/or cell growth; multiple copies in genome
 
GRMZM2G431821
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 24th, 2018
17 days agonactf25 NAC-transcription factor 25: Lines with a MITE insert in the promotor region are more sensitive to drought than those lacking this MITE insert.
 
   Vendramin, S et al. 2020. G3 doi: 10.1534/g3.119.40099   LOC_Os11g03300 (MSU/TIGR) Reference: March 18th, 2020
Gene Product: July 8th, 2019
Variation: September 22nd, 2015
17 days agonactf60 NAC-transcription factor 60: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Vendramin, S et al. 2020. G3 doi: 10.1534/g3.119.40099     Reference: March 18th, 2020
Gene Product: July 8th, 2019
17 days agosbp18 SBP-transcription factor 18: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Vendramin, S et al. 2020. G3 doi: 10.1534/g3.119.40099     Reference: March 18th, 2020
Gene Product: July 5th, 2019
17 days agosbp7 SBP-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Vendramin, S et al. 2020. G3 doi: 10.1534/g3.119.40099     Reference: March 18th, 2020
Gene Product: July 5th, 2019
17 days agopep4 phosphoenolpyruvate carboxylase4: cDNA for anaplerotic C3 isozyme; gene specific cDNA probe;
7.02
   Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Variation: December 27th, 2010
17 days agoelfa3 elongation factor alpha3: shares high (89-99%) nucleotide sequence identity with genes elf1a to elf1g, with a 99% sequence identity with elf1a.
6.05
GRMZM2G154218
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Variation: April 7th, 2014
Gene Model: July 27th, 2016
17 days agopip2b plasma membrane intrinsic protein2:
2.06
   Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Variation: March 19th, 2013
17 days agovpp8 vacuolar proton pump8: encodes a vacuolar H+-ATPase subunit
7.04
GRMZM2G019999
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Gene Model: August 25th, 2018
17 days agoppi1 peptidyl-prolyl isomerase1: cDNA homologous to tomato peptidyl-prolyl cis-trans isomerase
5.04
GRMZM2G326111
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: December 14th, 2014
Variation: December 18th, 2014
Gene Model: December 14th, 2014
17 days agoplt1 phospholipid transfer protein homolog1: amino acid sequence, deduced from coleoptile cDNA, homologous to phospholipid transfer proteins
3.06
GRMZM2G101958
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Variation: March 17th, 2015
Gene Model: March 12th, 2015
17 days agogrx1 glutaredoxin homolog1: leaf cDNA csu40, similar to E. coli glutaredoxin
2.04 - 2.04
GRMZM2G150295
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: August 12th, 2012
Variation: August 16th, 2012
Gene Model: August 16th, 2012
17 days agohis1a histone1a: cDNA sequences, SSR umc1577
7.01
GRMZM2G401308
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: October 24th, 2017
Variation: October 31st, 2017
Gene Model: July 24th, 2015
17 days agoahh1 adenosyl homocysteine hydrolase1: endosperm cDNA 5C01H11 (uaz145) similar to plant activated methyl cycle enzyme
4.03
   Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Variation: March 29th, 2015
17 days agoeif2 elongation initiation factor2: etiolated leaf cDNA 6C02E11(uaz224) similar to eIF-2 gamma chain
7.04
GRMZM2G107654
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Variation: July 8th, 2017
Gene Model: January 13th, 2015
17 days agokcs13 3-ketoacyl-CoA synthase13:
1.02
GRMZM2G445602
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: November 1st, 2018
Gene Model: September 2nd, 2018
17 days agofdl1 fused leaves1: coleoptile-first or first-second leaves fused at epidermis, curly
7.04
GRMZM2G056407
Vendramin, S et al. 2020. G3 doi: 10.1534/g3.119.40099     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Variation: February 13th, 2020
Gene Model: September 12th, 2018
17 days agoAY110562  :
4.06
   Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Variation: September 25th, 2007
17 days agobhlh132 bHLH-transcription factor 132: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.05
GRMZM2G114873
Vendramin, S et al. 2020. G3 doi: 10.1534/g3.119.40099     Reference: March 18th, 2020
Gene Product: September 14th, 2016
Gene Model: September 12th, 2016
17 days agohon110 histone one (H1): (was H1a); mapped by electrophoretic mobility polymorphism as alh1
1.11
GRMZM2G164020
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Variation: June 25th, 2014
Gene Model: October 25th, 2013
17 days agouce7 ubiquitin conjugating enzyme7:
 
GRMZM2G053764
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: December 19th, 2019
Variation: August 23rd, 2017
Gene Model: August 23rd, 2017
17 days agogpat11 glycerol-3-phosphate acyltransferase11:
 
GRMZM2G059637
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: March 25th, 2019
Gene Model: March 25th, 2019
17 days agoaldh17 aldehyde dehydrogenase17:
5.05
GRMZM2G169458
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
17 days agorps12a ribosomal proteinS12 (homolog):
6.07
GRMZM2G132929
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Gene Model: December 26th, 2019
17 days agobx6 benzoxazinone synthesis6: cytosolic 2-oxoglutarate-dependent dioxygenase; synthesis of cyclohydroxamates/DIMBOA; insect resistance in young seedlings; SSR umc1232
4.01
   Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: June 20th, 2016
Variation: April 12th, 2019
17 days agodbf1 DRE-binding protein 1:
1.07
GRMZM2G061487
Vendramin, S et al. 2020. G3 doi: 10.1534/g3.119.40099     Reference: March 18th, 2020
Gene Product: April 10th, 2013
Variation: July 27th, 2005
Gene Model: July 27th, 2016
18 days agoan1 anther ear1: andromonoecious dwarf, intermediate stature; few tassel branches; responds to gibberellins; an1-6923 includes deletion of Bz2+
1.08
GRMZM2G081554
Liang, ZK et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.03.003     Reference: March 17th, 2020
Gene Product: August 16th, 2012
Variation: June 8th, 2019
Gene Model: November 7th, 2011
18 days agolg2 liguleless2: like lg1, less extreme
3.06
   Liang, ZK et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.03.003     Reference: March 17th, 2020
Gene Product: August 22nd, 2014
Variation: August 20th, 2014
19 days agohak14 potassium high-affinity transporter14:
7.03
GRMZM2G139931
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Variation: September 1st, 2003
Gene Model: September 10th, 2018
19 days agoumc1259  :
2.04
GRMZM2G021834
    Variation: September 1st, 2003
Gene Model: March 16th, 2020
19 days agohak1 potassium high-affinity transporter1:
2.04
GRMZM2G093826
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: February 23rd, 2018
19 days agolac2 laccase2:
6.05
GRMZM2G146152
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: August 28th, 2018
19 days agohak8 potassium high-affinity transporter8:
1.04
GRMZM2G173387
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: February 7th, 2020
19 days agoopr7 12-oxo-phytodienoic acid reductase7: peroxisomal; jasmonic acid synthesis; opr7 opr8 double mutants are feminized, and have increased susceptibiliy to insect and fungal pests
 
GRMZM2G148281
He, YM et al. 2020. Phytochemistry 174:112334     Reference: March 16th, 2020
Gene Product: September 3rd, 2010
Variation: December 16th, 2019
Gene Model: November 25th, 2013
19 days agoopr8 12-oxo-phytodienoic acid reductase8: peroxisomal; synthesis of jasmonic acid
4.05
GRMZM2G082087
He, YM et al. 2020. Phytochemistry 174:112334     Reference: March 16th, 2020
Gene Product: September 3rd, 2010
Variation: December 16th, 2019
Gene Model: November 25th, 2013
19 days agolac10 laccase10:
 
GRMZM2G140527
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: May 6th, 2016
19 days agolac9 laccase9:
 
GRMZM2G132169
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: September 28th, 2016
19 days agolac3 laccase3:
 
GRMZM2G169033
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 31st, 2018
19 days agolac5 laccase5:
 
GRMZM2G367668
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 31st, 2018
19 days agolac4 laccase4:
 
GRMZM2G072780
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 31st, 2018
19 days agolac6 laccase6:
 
GRMZM2G164467
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 31st, 2018
19 days agolac1 laccase1:
 
GRMZM2G400390
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 31st, 2018
19 days agohak5 potassium high-affinity transporter5: mutants exhibit reduced K uptake and inhibited seedling growth
 
GRMZM2G084779
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Variation: December 15th, 2018
Gene Model: December 15th, 2018
19 days agohak4 high-affinity potassium transporter4: encodes a Na+-selective transporter
 
GRMZM2G425999
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: December 10th, 2019
19 days agolac11 laccase11:
 
GRMZM2G305526
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
19 days agolac12 laccase12:
 
GRMZM5G814718
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
19 days agolac13 laccase13:
 
GRMZM2G166857
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
19 days agolac14 laccase14:
 
AC234190.1_FG002
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
19 days agolac15 laccase15:
 
GRMZM2G072808
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
19 days agolac16 laccase16:
 
GRMZM5G870184
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
19 days agolac17 laccase17:
 
GRMZM2G309594
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
19 days agolac18 laccase18:
 
GRMZM2G388587
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
19 days agolac19 laccase19:
 
GRMZM2G320786
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
19 days agolac20 laccase20:
 
GRMZM5G800488
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
19 days agolac21 laccase21:
 
GRMZM2G447271
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
19 days agolac22 laccase22:
 
GRMZM2G336337
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
19 days agolac23 laccase23:
 
GRMZM2G094375
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
19 days agohak2 potassium high-affinity transporter2:
 
AC233953.1_FG005
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
19 days agohak3 potassium high-affinity transporter3:
 
GRMZM2G477457
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
19 days agohak7 potassium high-affinity transporter7:
 
GRMZM2G020766
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
19 days agohak9 potassium high-affinity transporter9:
 
GRMZM2G166738
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
19 days agohak10 potassium high-affinity transporter10:
 
GRMZM2G443728
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
19 days agohak11 potassium high-affinity transporter11:
 
GRMZM2G005040
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
19 days agohak12 potassium high-affinity transporter12:
 
GRMZM2G009353
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
19 days agohak13 potassium high-affinity transporter13:
 
GRMZM2G146140
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
19 days agohak15 potassium high-affinity transporter15:
 
GRMZM2G121063
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
19 days agohak16 potassium high-affinity transporter16:
 
GRMZM2G084486
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
19 days agohak6 potassium high-affinity transporter6:
 
GRMZM2G097505
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
19 days agohak17 potassium high-affinity transporter17:
 
GRMZM2G088964
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
19 days agohak18 potassium high-affinity transporter18:
 
GRMZM2G086389
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
19 days agohak19 potassium high-affinity transporter19:
 
GRMZM2G021725
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
19 days agohak20 potassium high-affinity transporter20:
 
GRMZM2G395267
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
19 days agohak22 potassium high-affinity transporter22:
 
GRMZM2G409771
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
19 days agohak21 potassium high-affinity transporter21:
 
GRMZM2G438960
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
19 days agohak23 potassium high-affinity transporter23:
 
GRMZM2G036916
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
19 days agohak24 potassium high-affinity transporter24:
 
GRMZM2G120163
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
19 days agohak25 potassium high-affinity transporter25:
 
GRMZM2G375116
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
19 days agohak26 potassium high-affinity transporter26:
 
   Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
19 days agohak27 potassium high-affinity transporter27:
 
GRMZM2G455817
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
19 days agolac7 laccase7:
 
GRMZM2G400390
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 16th, 2020
20 days agoumc1285  :
2.07
GRMZM2G050861
    Variation: September 1st, 2003
Gene Model: March 15th, 2020
20 days agoIDP1415  : similar to Arabidopsis Glycolipid transfer protein (GLTP) family protein
2.04
GRMZM2G021834
    Variation: March 31st, 2005
Gene Model: March 15th, 2020
21 days agofax2 fatty acid export2: candidate gene for pericarp thickness
 
GRMZM2G143389
Wu, XM et al. 2020. BMC Plant Biology pp.doi: 10.1186/s12870-020-2295-8     Reference: March 14th, 2020
Gene Product: March 14th, 2020
Gene Model: March 14th, 2020
21 days agofax1 fatty acid export1:
 
GRMZM2G046529
Wu, XM et al. 2020. BMC Plant Biology pp.doi: 10.1186/s12870-020-2295-8   At3g57280 (TAIR) Reference: March 14th, 2020
Gene Product: March 14th, 2020
Gene Model: March 14th, 2020
22 days agocsu861  :
2.03
GRMZM2G001241
    Variation: September 1st, 2003
Gene Model: March 13th, 2020
24 days agoereb53 AP2-EREBP-transcription factor 53: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Masters, A et al. 2020. Journal of Visual Experiments 156:e60782   LOC_Os1g67410 (MSU/TIGR) Reference: March 11th, 2020
Gene Product: July 5th, 2019
24 days agohb122 Homeobox-transcription factor 122: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Masters, A et al. 2020. Journal of Visual Experiments 156:e60782     Reference: March 11th, 2020
Gene Product: August 25th, 2017
28 days agoy1 yellow endosperm1: reduced carotenoid pigments in endosperm; some alleles affect chlorophyll in seedlings (e.g. y1-8549, y1-pb)
6.01
GRMZM2G300348
Alves, ML et al. 2020. J Agric Food Chem pp.doi: 10.1021/acs.jafc.9b07190     Reference: March 7th, 2020
Gene Product: December 14th, 2011
Variation: August 26th, 2014
Gene Model: September 22nd, 2011
28 days agovte4 vitamin E synthesis4:
5.06
GRMZM2G035213
Alves, ML et al. 2020. J Agric Food Chem pp.doi: 10.1021/acs.jafc.9b07190     Reference: March 7th, 2020
Gene Product: June 26th, 2013
Gene Model: June 26th, 2013
29 days agoct2 compact plant2: semi-dwarf plant, 1/3 height; shortened internodes; club tassel, fasciated ear
1.01 - 1.02
GRMZM2G064732
Zhou, ZP et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12809     Reference: March 6th, 2020
Gene Product: September 16th, 2013
Variation: September 20th, 2013
Gene Model: September 16th, 2013
29 days agomn1 miniature seed1: small, somewhat defective kernel, fully viable; invertase reduced
2.04
   Zhou, ZP et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12809     Reference: March 6th, 2020
Gene Product: June 12th, 2018
Variation: April 13th, 2015
29 days agoo11 opaque endosperm11: thin, opaque, somewhat shrunken kernels with greyish cast
 
GRMZM2G147685
Zhou, ZP et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12809   AT1G49770 (TAIR) Reference: March 6th, 2020
Gene Product: September 14th, 2016
Variation: February 8th, 2018
Gene Model: February 8th, 2018
29 days agotb1 teosinte branched1: many tillers; ear branches tassel-like; affects apical dominanceGRASSIUS: TCP transcription factor (TCP1)
1.09
   Zhou, ZP et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12809     Reference: March 6th, 2020
Gene Product: September 14th, 2016
Variation: February 2nd, 2017
29 days agotd1 thick tassel dwarf1: shortened plants, fasciated ears, increased spikelet density in tassel
5.03
GRMZM2G300133
Zhou, ZP et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12809     Reference: March 6th, 2020
Gene Product: October 22nd, 2012
Variation: October 23rd, 2012
Gene Model: October 22nd, 2012
29 days agoincw3 invertase cell wall3: genomic sequence (GenBank); SSR umc1053
10.04
   Zhou, ZP et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12809     Reference: March 6th, 2020
Gene Product: June 12th, 2018
Variation: October 7th, 2015
29 days agoemp2 empty pericarp 2: germless, unfilled kernel
2.06
   Zhou, ZP et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12809     Reference: March 6th, 2020
Variation: September 21st, 2011
29 days agocadtfr5 CCAAT-DR1-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhou, ZP et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12809     Reference: March 6th, 2020
Gene Product: August 9th, 2016
29 days agoub2 unbranched2: double mutant shows decrease in tassel branch number
 
   Zhou, ZP et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12809     Reference: March 6th, 2020
Gene Product: July 5th, 2019
Variation: December 17th, 2014
29 days agozfl2 Zea floricaula leafy2: zfl1 and zfl2 double mutants exhibit a disruption of floral organ identity and patterning, as well as defects in inflorescence architecture and in the vegetative to reproductive phase transition.
2.02
   Zhou, ZP et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12809     Reference: March 6th, 2020
Variation: October 9th, 2014
29 days agobri1a brassinosteroid insensitive1a: Encodes a brassinosteroid receptor
 
GRMZM2G048294
Zhou, ZP et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12809   AT4G39400 (TAIR)
LOC_Os01g52050 (MSU/TIGR)
Reference: March 6th, 2020
Variation: July 17th, 2015
Gene Model: July 16th, 2015
29 days agocle7 clavata3/esr-related7: mutants have fasciated ears
 
GRMZM2G372364
Tran, QH et al. 2020. Genes 11:281     Reference: March 6th, 2020
Variation: March 6th, 2020
Gene Model: September 15th, 2016
29 days agoincw5 invertase cell wall5:
 
GRMZM2G095725
Zhou, ZP et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12809   LOC_Os04g33740 (MSU/TIGR) Reference: March 6th, 2020
Gene Product: June 12th, 2018
Variation: August 16th, 2017
Gene Model: August 16th, 2017
29 days agopmei50 pectin methylesterase inhibitor50:
 
AC194254.3_FG004
Tran, QH et al. 2020. Genes 11:281     Reference: March 6th, 2020
Gene Product: January 8th, 2019
Gene Model: March 6th, 2020
30 days agowi5 wilted5: mutant plants displayed a drought-sensitive phenotype, with wilting and progressive leaf chlorosis after the 3-leaf stage
 
GRMZM2G002260
Hu, X et al. 2020. J Integr Plant Biol pp.doi: 10.1111/jipb.12923     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Variation: March 5th, 2020
Gene Model: March 4th, 2020

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